cell culture ontology (CCONT)
type: Ontology
version info: 1.1
creator: Matthias Ganzinger, matthias.ganzinger@med.uni-heidelberg.de
imports: efo

Snomedid
type: AnnotationProperty

has_growth_condition
type: ObjectProperty
definition: growth condition for cell culture

cytogeneticsProperty
type: DatatypeProperty

supplement
type: Class
subclass of: EFO_0000523

amino acid role
type: Class
subclass of: supplement

essential amino acid
type: Class
subclass of: amino acid role

non-essential amino acid
type: Class
subclass of: amino acid role

conditionally essential amino acid
type: Class
subclass of: amino acid role

amino acid
type: Class
equivalent class: Restriction
  on property: OBI_0000316
  some values from: amino acid role
subclass of: http://www.ebi.ac.uk/chebi/searchId.do

aspartate
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: non-essential amino acid

glutamate
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: non-essential amino acid

essential amino acid
type: Class
equivalent class: Restriction
  on property: OBI_0000316
  some values from: essential amino acid
subclass of: amino acid

non-essential amino acid
type: Class
equivalent class: Restriction
  on property: OBI_0000316
  some values from: non-essential amino acid
subclass of: amino acid

conditionally essential amino acid
type: Class
equivalent class: Restriction
  on property: OBI_0000316
  some values from: conditionally essential amino acid
subclass of: amino acid

erythromycin
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: http://www.ebi.ac.uk/chebi/searchId.do

g418 disulfate
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: http://www.ebi.ac.uk/chebi/searchId.do

neomycin trisulfate
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: http://www.ebi.ac.uk/chebi/searchId.do

penicillin G
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: http://www.ebi.ac.uk/chebi/searchId.do

polymyin B
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: http://www.ebi.ac.uk/chebi/searchId.do

prolactin
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: EFO_0001824

somatostatin
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: EFO_0001824

salt role
type: Class
subclass of: supplement

monopotassium phosphate
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: salt role
alternative term: KH2PO4

magnesium sulfate
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: salt role
alternative term: Mg SO4

disodium hydrogen phosphate
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: salt role
alternative term: Na2HPO4

sodium bicarbonate
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: salt role
alternative term: NaHCO3

salt
type: Class
equivalent class: Restriction
  on property: OBI_0000316
  some values from: salt role
subclass of: http://www.ebi.ac.uk/chebi/searchId.do

mixture
type: Class
subclass of: MaterialEntity

fetal bovine serum
type: Class
subclass of: mixture
subclass of: Restriction
  on property: OBI_0000316
  some values from: serum role
alternative term: FBS

bovine calf serum
type: Class
subclass of: mixture
subclass of: Restriction
  on property: OBI_0000316
  some values from: serum role

bovine serum
type: Class
subclass of: mixture
subclass of: Restriction
  on property: OBI_0000316
  some values from: serum role

newborn calf serum
type: Class
subclass of: mixture
subclass of: Restriction
  on property: OBI_0000316
  some values from: serum role

chicken Serum
type: Class
subclass of: mixture
subclass of: Restriction
  on property: OBI_0000316
  some values from: serum role

goat serum
type: Class
subclass of: mixture
subclass of: Restriction
  on property: OBI_0000316
  some values from: serum role

porcine Serum
type: Class
subclass of: mixture
subclass of: Restriction
  on property: OBI_0000316
  some values from: serum role

rabbit serum
type: Class
subclass of: mixture
subclass of: Restriction
  on property: OBI_0000316
  some values from: serum role

sheep serum
type: Class
subclass of: mixture
subclass of: Restriction
  on property: OBI_0000316
  some values from: serum role

human serum
type: Class
subclass of: mixture
subclass of: Restriction
  on property: OBI_0000316
  some values from: serum role

horse serum
type: Class
subclass of: mixture
subclass of: Restriction
  on property: OBI_0000316
  some values from: serum role

serum role
type: Class
subclass of: supplement

safety classification
type: Class
subclass of: Quality

biosafety level
type: Class
subclass of: safety classification

risk group
type: Class
subclass of: safety classification

rsik group 1
type: Class
subclass of: risk group

rsik group 2
type: Class
subclass of: risk group

rsik group 3
type: Class
subclass of: risk group

rsik group 4
type: Class
subclass of: risk group

biosafety level 1
type: Class
subclass of: biosafety level
Snomedid: R-41E4D

biosafety level 2
type: Class
subclass of: biosafety level
Snomedid: R-41E4E

biosafety level 3
type: Class
subclass of: biosafety level
Snomedid: R-41E4F

trypsin
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: detachment aid

cell cultivation task
type: Class
subclass of: EFO_0002694

subcultivation
type: Class
subclass of: cell cultivation task

seed
type: Class
subclass of: cell cultivation task

split
type: Class
subclass of: cell cultivation task

incubate
type: Class
subclass of: cell cultivation task

detachment aid
type: Class
subclass of: Role

confluence rate
type: Class
subclass of: EFO_0001444

split ratio
type: Class
subclass of: EFO_0001444

seed density
type: Class
subclass of: EFO_0001444

growth mode
type: Class
subclass of: Quality

adherent
type: Class
subclass of: growth mode

suspended
type: Class
subclass of: growth mode

STR marker
type: Class
subclass of: IAO_0000030

D3S1358
type: Class
subclass of: STR marker

THO1
type: Class
subclass of: STR marker

D21S11
type: Class
subclass of: STR marker

D18S51
type: Class
subclass of: STR marker

D5S818
type: Class
subclass of: STR marker

D13S317
type: Class
subclass of: STR marker

D7S820
type: Class
subclass of: STR marker

D16S539
type: Class
subclass of: STR marker

CSF1PO
type: Class
subclass of: STR marker

vWA
type: Class
subclass of: STR marker

D8S1179
type: Class
subclass of: STR marker

TPOX
type: Class
subclass of: STR marker

FGA
type: Class
subclass of: STR marker

D2S1338
type: Class
subclass of: STR marker

D19S433
type: Class
subclass of: STR marker

Amelogenin
type: Class
subclass of: STR marker

cellular product
type: Class
subclass of: Role

cytogenetics
type: Class
subclass of: Quality

str marker
type: Class
subclass of: Role

biosafety level 4
type: Class
subclass of: biosafety level
Snomedid: R-41E50

alpha-fetoprotein
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do

HBsAg
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do

EBV
type: Class
subclass of: NCBITaxon_10239

HBV
type: Class
subclass of: NCBITaxon_10239

HCV
type: Class
subclass of: NCBITaxon_10239

HIV
type: Class
subclass of: NCBITaxon_10239

HTLV-I-II
type: Class
subclass of: NCBITaxon_10239

SMRV
type: Class
subclass of: NCBITaxon_10239

HuH-7
type: Class
subclass of: EFO_0000322
subclass of: Restriction
  on property: bearer of
  some values from: EFO_0000182

PLC-PRF-5
type: Class
subclass of: EFO_0000322
subclass of: Restriction
  on property: bearer of
  some values from: EFO_0000182

FESFPS
type: Class
subclass of: STR marker

F13B
type: Class
subclass of: STR marker

F13A01
type: Class
subclass of: STR marker

THLE-3
type: Class
subclass of: EFO_0000322
subclass of: Restriction
  on property: bearer of
  some values from: EFO_0000182

THLE-2
type: Class
subclass of: EFO_0000322
subclass of: Restriction
  on property: bearer of
  some values from: EFO_0000182

Hepa 1-6
type: Class
subclass of: EFO_0000322

BNL
type: Class
subclass of: EFO_0000322

glycine
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: non-essential amino acid

mycophenolic acid
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: http://www.ebi.ac.uk/chebi/searchId.do

hygromycin B
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: http://www.ebi.ac.uk/chebi/searchId.do

streptomycin
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: http://www.ebi.ac.uk/chebi/searchId.do

serine
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: non-essential amino acid

tyrosine
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: conditionally essential amino acid

asparagine
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: non-essential amino acid

isoleucine
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: essential amino acid

leucine
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: essential amino acid

lysine
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: essential amino acid

proline
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: non-essential amino acid

threonine
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: essential amino acid

valine
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: essential amino acid

histidine
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: essential amino acid

tryptophan
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: essential amino acid

phenylalanine
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: essential amino acid

arginine
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: conditionally essential amino acid

magnesium sulfate
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: salt role

carbenicillin
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: http://www.ebi.ac.uk/chebi/searchId.do

disodium hydrogenphosphate
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: salt role

guanidine
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: http://www.ebi.ac.uk/chebi/searchId.do

erythromycin
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: http://www.ebi.ac.uk/chebi/searchId.do

kanamycin
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: http://www.ebi.ac.uk/chebi/searchId.do

nystatin
type: Class
subclass of: http://www.ebi.ac.uk/chebi/searchId.do
subclass of: Restriction
  on property: OBI_0000316
  some values from: http://www.ebi.ac.uk/chebi/searchId.do

Medium condition
type: Class
subclass of: mixture
subclass of: Restriction
  on property: OBI_0000316
  some values from: EFO_0000579
has OBO namespace: event

KBM (medium)
type: Class
subclass of: Epidermal keratinocyto medium
has OBO namespace: event

KBM-2 (medium)
type: Class
subclass of: Epidermal keratinocyto medium
has OBO namespace: event

MEGM (medium)
type: Class
subclass of: Mammary epithelial cell medium
has OBO namespace: event

MEBM (medium)
type: Class
subclass of: Mammary epithelial cell medium
has OBO namespace: event

BEBM (medium)
type: Class
subclass of: Human bronchial epithelial cell medium
has OBO namespace: event

SABM (medium)
type: Class
subclass of: Human bronchial epithelial cell medium
has OBO namespace: event

PrEGM (medium)
type: Class
subclass of: Human prostate epithelial cell medium
has OBO namespace: event

PrEBM (medium)
type: Class
subclass of: Human prostate epithelial cell medium
has OBO namespace: event

DMEM (medium)
type: Class
subclass of: ES cell medium
has OBO namespace: event

199 medium
type: Class
subclass of: Chicken aortic smooth muscle cell medium
subclass of: Fibroblast medium
has OBO namespace: event

Animal cell medium
type: Class
subclass of: Medium condition
has OBO namespace: event

KGM-2 (medium)
type: Class
subclass of: Epidermal keratinocyto medium
has OBO namespace: event

Rat cell medium
type: Class
subclass of: Animal cell medium
has OBO namespace: event

Mouse cell medium
type: Class
subclass of: Animal cell medium
has OBO namespace: event

Neuronal cell medium
type: Class
subclass of: Medium condition
has OBO namespace: event

ES cell medium
type: Class
subclass of: Medium condition
has OBO namespace: event

HeLa medium
type: Class
subclass of: Medium condition
has OBO namespace: event

BME medium
type: Class
subclass of: HeLa medium
subclass of: Mouse L-cell medium
has OBO namespace: event

Mouse L-cell medium
type: Class
subclass of: Medium condition
has OBO namespace: event

Hepatocyte medium
type: Class
subclass of: Medium condition
has OBO namespace: event

Epidermal keratinocyto medium
type: Class
subclass of: Medium condition
has OBO namespace: event

Macrophage medium
type: Class
subclass of: Medium condition
has OBO namespace: event

Amniocyte medium
type: Class
subclass of: Medium condition
has OBO namespace: event

Peripheral blood medium
type: Class
subclass of: Medium condition
has OBO namespace: event

Bone marrow medium
type: Class
subclass of: Medium condition
has OBO namespace: event

Human hematopoietic cell medium
type: Class
subclass of: Medium condition
has OBO namespace: event

Lymphocyte medium
type: Class
subclass of: Medium condition
has OBO namespace: event

CHO medium
type: Class
subclass of: Medium condition
has OBO namespace: event

DG44 medium
type: Class
subclass of: Medium condition
has OBO namespace: event

293 medium
type: Class
subclass of: Medium condition
has OBO namespace: event

COS-7 medium
type: Class
subclass of: Medium condition
has OBO namespace: event

MDCK medium
type: Class
subclass of: Medium condition
has OBO namespace: event

VERO medium
type: Class
subclass of: Medium condition
has OBO namespace: event

BHK-21 medium
type: Class
subclass of: Medium condition
has OBO namespace: event

PK-15 medium
type: Class
subclass of: Medium condition
has OBO namespace: event

CV-1 medium
type: Class
subclass of: Medium condition
has OBO namespace: event

WI-38 medium
type: Class
subclass of: Medium condition
has OBO namespace: event

Hybridoma cell medium
type: Class
subclass of: Medium condition
has OBO namespace: event

HEp2 medium
type: Class
subclass of: Medium condition
has OBO namespace: event

A549 medium
type: Class
subclass of: Medium condition
has OBO namespace: event

BSC-1 medium
type: Class
subclass of: Medium condition
has OBO namespace: event

Ham's F-10 medium
type: Class
subclass of: CHO medium
subclass of: Hybridoma cell medium
subclass of: Myeloma medium
has OBO namespace: event

Myeloma medium
type: Class
subclass of: Medium condition
has OBO namespace: event

Ham's F-12 medium
type: Class
subclass of: CHO medium
subclass of: Hybridoma cell medium
subclass of: Myeloma medium
has OBO namespace: event

IMDM (medium)
type: Class
subclass of: Lymphocyte medium
subclass of: Hybridoma cell medium
has OBO namespace: event

Chicken aortic smooth muscle cell medium
type: Class
subclass of: Medium condition
has OBO namespace: event

Fibroblast medium
type: Class
subclass of: Medium condition
has OBO namespace: event

All-purpose medium
type: Class
subclass of: Medium condition
has OBO namespace: event

MEM (medium)
type: Class
subclass of: All-purpose medium
has OBO namespace: event

Alpha MEM (medium)
type: Class
subclass of: Hybridoma cell medium
has OBO namespace: event

Jurkat cell medium
type: Class
subclass of: Medium condition
has OBO namespace: event

HL60 medium
type: Class
subclass of: Medium condition
has OBO namespace: event

Waymouth's medium
type: Class
subclass of: Mouse L-cell medium
has OBO namespace: event

Mesenchymal cell medium
type: Class
subclass of: Medium condition
has OBO namespace: event

Human bronchial epithelial cell medium
type: Class
subclass of: Medium condition
has OBO namespace: event

Mammary epithelial cell medium
type: Class
subclass of: Medium condition
has OBO namespace: event

Human prostate epithelial cell medium
type: Class
subclass of: Medium condition
has OBO namespace: event

SAGM (medium)
type: Class
subclass of: Human bronchial epithelial cell medium
has OBO namespace: event

BEGM (medium)
type: Class
subclass of: Human bronchial epithelial cell medium
has OBO namespace: event

KGM (medium)
type: Class
subclass of: Epidermal keratinocyto medium
has OBO namespace: event

Human vascular smooth muscle medium
type: Class
subclass of: Medium condition
has OBO namespace: event

Human vascular endothelial cell medium
type: Class
subclass of: Medium condition
has OBO namespace: event