loggerhead.owl
type: Ontology
has_obo_format_version: 1.0
date: 13:01:2004 19:52
default-namespace: B8467
auto-generated-by: DAG-Edit 1.408
saved-by: peter
version IRI: loggerhead.owl

definition
type: AnnotationProperty

database_cross_reference
type: AnnotationProperty

has_obo_format_version
type: AnnotationProperty

has_obo_namespace
type: AnnotationProperty

has_related_synonym
type: AnnotationProperty

follows
type: ObjectProperty
has_obo_namespace: B8467
id: follows

part of
type: ObjectProperty
has_obo_namespace: B8467
id: part_of

uses_part
type: ObjectProperty
has_obo_namespace: B8467
id: uses_part

Sand Substrate
type: Class
subclass of: Substrate
id: A8467:0000056
has_obo_namespace: B8467

Dune
type: Class
subclass of: Sand Substrate
id: A8467:0000057
has_obo_namespace: B8467
definition: Elevated area of sand.
comment: Todo: describe a set of these, up to 1 meter in height.

Axiom
database_cross_reference: ETD:0000189
annotated target: Elevated area of sand.
annotated source: Dune
annotated property: definition

Tidal Ridge
type: Class
subclass of: Sand Substrate
definition: A sand substrate with ridges formed by tidal action.
id: A8467:0000058
has_obo_namespace: B8467

Axiom
annotated target: A sand substrate with ridges formed by tidal action.
database_cross_reference: ETD:0000190
annotated source: Tidal Ridge
annotated property: definition

Body Pit
type: Class
subclass of: Sand Substrate
id: A8467:0000059
has_obo_namespace: B8467
definition: The turtle digs this out of the substrate with limb sweeps. H&E p. 7.

Axiom
database_cross_reference: ETD:0000188
annotated target: The turtle digs this out of the substrate with limb sweeps. H&E p. 7.
annotated source: Body Pit
annotated property: definition

Body
type: Class
subclass of: Restriction
  on property: part of
  some values from: Caretta caretta
id: A8467:0000060
has_obo_namespace: B8467

Caretta caretta
type: Class
subclass of: Organism
id: A8467:0000061
has_obo_namespace: B8467
definition: Common name loggerhead sea turtle

Axiom
annotated target: Common name loggerhead sea turtle
database_cross_reference: NCBI:8467
annotated source: Caretta caretta
annotated property: definition

Chin
type: Class
subclass of: Restriction
  on property: part of
  some values from: Head
id: A8467:0000062
has_obo_namespace: B8467

Head
type: Class
subclass of: Part of Organism
subclass of: Restriction
  on property: part of
  some values from: Caretta caretta
id: A8467:0000064
has_obo_namespace: B8467

Limb
type: Class
subclass of: Part of Organism
id: A8467:0000065
has_obo_namespace: B8467

Hind leg
type: Class
subclass of: Limb
subclass of: Restriction
  on property: part of
  some values from: Caretta caretta
id: A8467:0000066
has_obo_namespace: B8467

Front leg
type: Class
subclass of: Limb
subclass of: Restriction
  on property: part of
  some values from: Caretta caretta
id: A8467:0000067
has_obo_namespace: B8467

Left front leg
type: Class
subclass of: Front leg
id: A8467:0000068
has_obo_namespace: B8467

Right front leg
type: Class
subclass of: Front leg
id: A8467:0000069
has_obo_namespace: B8467

Left hind leg
type: Class
subclass of: Hind leg
id: A8467:0000070
has_obo_namespace: B8467

Right hind leg
type: Class
subclass of: Hind leg
id: A8467:0000071
has_obo_namespace: B8467

Front flipper
type: Class
subclass of: Restriction
  on property: part of
  some values from: Front leg
id: A8467:0000072
has_obo_namespace: B8467

Hind flipper
type: Class
subclass of: Restriction
  on property: part of
  some values from: Hind leg
id: A8467:0000073
has_obo_namespace: B8467

Mucus
type: Class
subclass of: Stuff
id: A8467:0000074
has_obo_namespace: B8467

Sand
type: Class
subclass of: Stuff
id: A8467:0000075
has_obo_namespace: B8467

Water
type: Class
subclass of: Stuff
id: A8467:0000076
has_obo_namespace: B8467

Air
type: Class
subclass of: Stuff
id: A8467:0000077
has_obo_namespace: B8467

Cylinder
type: Class
subclass of: 3D Shape
id: A8467:0000078
has_obo_namespace: B8467

Tube
type: Class
subclass of: Cylinder
id: A8467:0000079
has_obo_namespace: B8467

Naive polar
type: Class
subclass of: Coordinate System
id: A8467:0000080
has_obo_namespace: B8467

Loggerhead nesting sequence
type: Class
subclass of: Simple script
comment: A modified version of the sequence given in Bustard et al. 1975.
has_obo_namespace: B8467
id: B8467:0000051
definition: The 10-step top level sequence for female loggerhead nesting. H&E p. 3.

Axiom
database_cross_reference: ETD:0000065
database_cross_reference: HE:9
annotated target: The 10-step top level sequence for female loggerhead nesting. H&E p. 3.
annotated source: Loggerhead nesting sequence
annotated property: definition

Flipper digging
type: Class
subclass of: Action Pattern
has_obo_namespace: B8467
id: B8467:0000063

Hindlimb sand dump
type: Class
subclass of: Action Pattern
has_obo_namespace: B8467
id: B8467:0000082
definition: the hindlimb carrying the sand rotates such that the anterior edge moves down, the forward, which...dumps the sand. H&E p.11.

Axiom
database_cross_reference: ETD:00000006
annotated target: the hindlimb carrying the sand rotates such that the anterior edge moves down, the forward, which...dumps the sand. H&E p.11.
annotated source: Hindlimb sand dump
annotated property: definition

Contralateral sand dump
type: Class
subclass of: Hindlimb sand dump
has_obo_namespace: B8467
id: B8467:0000083
definition: Variant of Posterolateral sand dump. H&E p. 11,24.

Axiom
database_cross_reference: EDT:0000007
annotated target: Variant of Posterolateral sand dump. H&E p. 11,24.
annotated source: Contralateral sand dump
annotated property: definition

Ipsilateral sand dump
type: Class
subclass of: Hindlimb sand dump
has_obo_namespace: B8467
id: B8467:0000084
definition: Varient of Posterolateral sand dump. H&E p. 11,24.

Axiom
database_cross_reference: EDT:0000008
annotated target: Varient of Posterolateral sand dump. H&E p. 11,24.
annotated source: Ipsilateral sand dump
annotated property: definition

Posterior spray dump
type: Class
subclass of: Hindlimb sand dump
has_obo_namespace: B8467
id: B8467:0000085
definition: Variant of Posterolateral sand dump. H&E p. 11, 24.

Axiom
database_cross_reference: EDT:0000009
annotated target: Variant of Posterolateral sand dump. H&E p. 11, 24.
annotated source: Posterior spray dump
annotated property: definition

Posterolateral sand dump
type: Class
subclass of: Hindlimb sand dump
has_obo_namespace: B8467
id: B8467:0000086
definition: The common variant of the Hindlimb sand dump. H&E p. 11, 24.

Axiom
database_cross_reference: EDT:0000010
annotated target: The common variant of the Hindlimb sand dump. H&E p. 11, 24.
annotated source: Posterolateral sand dump
annotated property: definition

Hindlimb sand flicks
type: Class
subclass of: Action Pattern
has_obo_namespace: B8467
id: B8467:0000087
definition: Flicking denotes moving sand with a forward movement of the limb. H&E p. 9.

Axiom
database_cross_reference: EDT:0000013
annotated target: Flicking denotes moving sand with a forward movement of the limb. H&E p. 9.
annotated source: Hindlimb sand flicks
annotated property: definition

Alternate hindlimb flick
type: Class
subclass of: Action Pattern
has_obo_namespace: B8467
id: B8467:0000088
definition: Flicking the sand alternately with the hindlimbs.

Axiom
database_cross_reference: ETD:000002
annotated target: Flicking the sand alternately with the hindlimbs.
annotated source: Alternate hindlimb flick
annotated property: definition

Concurrent actions
type: Class
subclass of: Action unit
has_obo_namespace: B8467
id: B8467:0000089

LH flick
type: Class
subclass of: Single hindlimb flick
subclass of: Restriction
  on property: part of
  some values from: Alternate hindlimb flick
has_obo_namespace: B8467
id: B8467:0000090
definition: Flicking motion with the left hindlimb. Inferred from parent B8467:0000107.

Axiom
database_cross_reference: ETD:0000128
annotated target: Flicking motion with the left hindlimb. Inferred from parent B8467:0000107.
annotated source: LH flick
annotated property: definition

RH flick
type: Class
subclass of: Single hindlimb flick
subclass of: Restriction
  on property: part of
  some values from: Alternate hindlimb flick
has_obo_namespace: B8467
id: B8467:0000091
definition: Flicking motion with the right hindlimb. Inferred from parent B8467:0000107.

Axiom
database_cross_reference: ETD:0000129
annotated target: Flicking motion with the right hindlimb. Inferred from parent B8467:0000107.
annotated source: RH flick
annotated property: definition

Sand packing
type: Class
subclass of: Action Pattern
has_obo_namespace: B8467
id: B8467:0000092
definition: Sequence of motions to pile and compact the sand over the egg chamber. H&E p. 16.

Axiom
database_cross_reference: ETD:0000019
annotated target: Sequence of motions to pile and compact the sand over the egg chamber. H&E p. 16.
annotated source: Sand packing
annotated property: definition

Foot packing
type: Class
subclass of: Packing action
subclass of: Restriction
  on property: part of
  some values from: Sand packing
has_obo_namespace: B8467
id: B8467:0000093
definition: Sand packing actions performed with the foot. H&E p. 16.

Axiom
database_cross_reference: ETD:0000020
annotated target: Sand packing actions performed with the foot. H&E p. 16.
annotated source: Foot packing
annotated property: definition

Knee packing
type: Class
subclass of: Packing action
subclass of: Restriction
  on property: part of
  some values from: Sand packing
has_obo_namespace: B8467
id: B8467:0000094
definition: Sand packing actions performed with the knee. H&E p. 17.

Axiom
database_cross_reference: ETD:0000024
annotated target: Sand packing actions performed with the knee. H&E p. 17.
annotated source: Knee packing
annotated property: definition

Foot Grind
type: Class
subclass of: Foot packing
has_obo_namespace: B8467
id: B8467:0000095
definition: Foot is rotated so the anterior edge is on the sand, usually accompanied by circular grinding. H&E p. 17.

Axiom
database_cross_reference: ETD:0000021
annotated target: Foot is rotated so the anterior edge is on the sand, usually accompanied by circular grinding. H&E p. 17.
annotated source: Foot Grind
annotated property: definition

Heel Grind
type: Class
subclass of: Foot packing
has_obo_namespace: B8467
id: B8467:0000096
definition: The bend of the heel carries the force to the sand. H&E p. 17.

Axiom
database_cross_reference: ETD:0000022
annotated target: The bend of the heel carries the force to the sand. H&E p. 17.
annotated source: Heel Grind
annotated property: definition

Ventral Pack
type: Class
subclass of: Foot packing
has_obo_namespace: B8467
id: B8467:0000097
definition: flipper pushes downward on the sand with ventral surface. H&E p. 16.

Axiom
database_cross_reference: ETD:0000023
annotated target: flipper pushes downward on the sand with ventral surface. H&E p. 16.
annotated source: Ventral Pack
annotated property: definition

Kneading Pack
type: Class
subclass of: Knee packing
has_obo_namespace: B8467
id: B8467:0000098
definition: Presses alternately with the hindlimbs. H&E p. 17.

Axiom
database_cross_reference: ETD:0000025
annotated target: Presses alternately with the hindlimbs. H&E p. 17.
annotated source: Kneading Pack
annotated property: definition

Kneeling Pack
type: Class
subclass of: Knee packing
has_obo_namespace: B8467
id: B8467:0000099
definition: brings hindlimbs close together and raises posterior end by pushing downward. H&E p. 17.

Axiom
database_cross_reference: ETD:0000026
annotated target: brings hindlimbs close together and raises posterior end by pushing downward. H&E p. 17.
annotated source: Kneeling Pack
annotated property: definition

Kneeling Side-Step
type: Class
subclass of: Knee packing
has_obo_namespace: B8467
id: B8467:0000100
definition: Side stepping across the top of the egg chamber. H&E p. 17.

Axiom
database_cross_reference: ETD:0000027
annotated target: Side stepping across the top of the egg chamber. H&E p. 17.
annotated source: Kneeling Side-Step
annotated property: definition

Sand pulling
type: Class
subclass of: Action Pattern
has_obo_namespace: B8467
id: B8467:0000101
definition: Set of sand movement motions of the hindlimbs rotated such that their anterior edge is against the substrate while the limb moves backward. H&E p. 15.

Axiom
database_cross_reference: ETD:0000028
annotated target: Set of sand movement motions of the hindlimbs rotated such that their anterior edge is against the substrate while the limb moves backward. H&E p. 15.
annotated source: Sand pulling
annotated property: definition

Alternate Hindlimb Scoop/Pull
type: Class
subclass of: Sand pulling
has_obo_namespace: B8467
id: B8467:0000102
definition: Both hindlimbs move, out of phase, to pull sand into the partially filled egg chamber. H&E p. 15, 16.

Axiom
annotated target: Both hindlimbs move, out of phase, to pull sand into the partially filled egg chamber. H&E p. 15, 16.
database_cross_reference: ETD:0000029
annotated source: Alternate Hindlimb Scoop/Pull
annotated property: definition

Single Hindlimb Scoop/Pull
type: Class
subclass of: Sand pulling
has_obo_namespace: B8467
id: B8467:0000103
definition: motion of a single leg during either the synchronous or alternate hindlimb scoop/pull. H&E p. 15.

Axiom
database_cross_reference: ETD:0000035
annotated target: motion of a single leg during either the synchronous or alternate hindlimb scoop/pull. H&E p. 15.
annotated source: Single Hindlimb Scoop/Pull
annotated property: definition

Sand Throwing
type: Class
subclass of: Folding
has_obo_namespace: B8467
id: B8467:0000104
definition: Sand Throwing is done by digging the anterior edge of the flipper into the substrate and moving sand backward with the flipper's ventral surface. Sand Throwing is far more vigorous than Sand Pulling and gives the impression of being even more vigorous than the Sand Sweeping movements. H&E p. 18.

Axiom
database_cross_reference: ETD:0000130
annotated target: Sand Throwing is done by digging the anterior edge of the flipper into the substrate and moving sand backward with the flipper's ventral surface. Sand Throwing is far more vigorous than Sand Pulling and gives the impression of being even more vigorous than the Sand Sweeping movements. H&E p. 18.
annotated source: Sand Throwing
annotated property: definition

RH Scoop/Pull
type: Class
subclass of: Himblimb Scoop/Pull
has_obo_namespace: B8467
id: B8467:0000105
definition: Right side version of Hindlimb Scoop/Pull (ETD:0000096). H&E p. 15,16.

Axiom
database_cross_reference: ETD:0000098
annotated target: Right side version of Hindlimb Scoop/Pull (ETD:0000096). H&E p. 15,16.
annotated source: RH Scoop/Pull
annotated property: definition

Sand Sweeping/Flicking
type: Class
subclass of: Folding
has_obo_namespace: B8467
id: B8467:0000106
definition: Flipper movements involved in sand moving. H&E p. 9.

Axiom
database_cross_reference: ETD:0000120
annotated target: Flipper movements involved in sand moving. H&E p. 9.
annotated source: Sand Sweeping/Flicking
annotated property: definition

Single hindlimb flick
type: Class
subclass of: Sand Sweeping/Flicking
has_obo_namespace: B8467
id: B8467:0000107
definition: Flicking denotes moving sand with a forward movement of the limb. H&E p. 9.

Axiom
database_cross_reference: ETD:0000127
annotated target: Flicking denotes moving sand with a forward movement of the limb. H&E p. 9.
annotated source: Single hindlimb flick
annotated property: definition

Forelimb Sweep
type: Class
subclass of: Sand Sweeping/Flicking
has_obo_namespace: B8467
id: B8467:0000108
definition: Forelimbs are raised and brought nearly in front of the head before scraping into the sand and moved nearly to the side of the animal, leaving there a pile of swept sand. H&E p. 7, 8.

Axiom
database_cross_reference: ETD:0000121
annotated target: Forelimbs are raised and brought nearly in front of the head before scraping into the sand and moved nearly to the side of the animal, leaving there a pile of swept sand. H&E p. 7, 8.
annotated source: Forelimb Sweep
annotated property: definition

Pull Shadowing
type: Class
subclass of: Sand pulling
has_obo_namespace: B8467
id: B8467:0000109
definition: motion of the contralateral limb during Single Hindlimb Scoop/Pull. H&E p. 15.

Axiom
database_cross_reference: ETD:0000032
annotated target: motion of the contralateral limb during Single Hindlimb Scoop/Pull. H&E p. 15.
annotated source: Pull Shadowing
annotated property: definition

LH pull shadowing
type: Class
subclass of: Pull Shadowing
has_obo_namespace: B8467
id: B8467:0000110
definition: Inferred from parent.

Axiom
database_cross_reference: ETD:0000033
annotated target: Inferred from parent.
annotated source: LH pull shadowing
annotated property: definition

RH pull shadowing
type: Class
subclass of: Pull Shadowing
has_obo_namespace: B8467
id: B8467:0000111
definition: Inferred from parent.

Axiom
database_cross_reference: ETD:0000034
annotated target: Inferred from parent.
annotated source: RH pull shadowing
annotated property: definition

Synchronous HL Scoop/Pull
type: Class
subclass of: Sand pulling
has_obo_namespace: B8467
id: B8467:0000112
definition: Both hindlimbs move synchronously to pull sand into th partially filled egg chamber. H&E p. 15, 16.

Axiom
annotated target: Both hindlimbs move synchronously to pull sand into th partially filled egg chamber. H&E p. 15, 16.
database_cross_reference: ETD:0000036
annotated source: Synchronous HL Scoop/Pull
annotated property: definition

Sand sweep
type: Class
subclass of: Action Pattern
has_obo_namespace: B8467
id: B8467:0000113
definition: Moving sand by dragging the ventral portion of a flipper. H&E p. 7.

Axiom
database_cross_reference: ETD:0000038
annotated target: Moving sand by dragging the ventral portion of a flipper. H&E p. 7.
annotated source: Sand sweep
annotated property: definition

Alternate Hindlimb Sweep
type: Class
subclass of: Sand sweep
has_obo_namespace: B8467
id: B8467:0000114
definition: Hindlimbs are swept alternately (RH-LH-). H&E p. 7.

Axiom
database_cross_reference: ETD:0000039
annotated target: Hindlimbs are swept alternately (RH-LH-). H&E p. 7.
annotated source: Alternate Hindlimb Sweep
annotated property: definition

Diagonally Opposite Sweep
type: Class
subclass of: Sand sweep
has_obo_namespace: B8467
id: B8467:0000115
definition: Diagonally opposite legs are moved (nearly) synchronously. H&E p. 7.

Axiom
annotated target: Diagonally opposite legs are moved (nearly) synchronously. H&E p. 7.
database_cross_reference: ETD:0000040
annotated source: Diagonally Opposite Sweep
annotated property: definition

Synchronous Forelimb Sweep
type: Class
subclass of: Sand sweep
has_obo_namespace: B8467
id: B8467:0000116
definition: Sand sweeps with the forelimbs moved synchronously (LF/RF-). H&E p. 7.

Axiom
database_cross_reference: ETD:0000041
annotated target: Sand sweeps with the forelimbs moved synchronously (LF/RF-). H&E p. 7.
annotated source: Synchronous Forelimb Sweep
annotated property: definition

Swim
type: Class
subclass of: Action Pattern
has_obo_namespace: B8467
id: B8467:0000117
definition: Synchronous movements of the forlimbs (LF/RF-...) A swimming loggerhead...trailed the hind feet laterally. H&E p. 3.

Axiom
database_cross_reference: ETD:0000047
annotated target: Synchronous movements of the forlimbs (LF/RF-...) A swimming loggerhead...trailed the hind feet laterally. H&E p. 3.
annotated source: Swim
annotated property: definition

Reproductive Function
type: Class
subclass of: Functional Explanation
definition: An explanation in terms of the actor reproducing or increasing its opportunities or chances of doing so.
has_obo_namespace: B8467
id: B8467:0000118

Axiom
annotated target: An explanation in terms of the actor reproducing or increasing its opportunities or chances of doing so.
database_cross_reference: ETD:0000195
annotated source: Reproductive Function
annotated property: definition

Throwing motions
type: Class
subclass of: Action Pattern
has_obo_namespace: B8467
id: B8467:0000119
definition: throwing is done by digging the anterior edge of the flipper into the substrate and moving sand backward. Far more vigorous than sand pulling. H&E p. 18.

Axiom
database_cross_reference: EDT:0000051
annotated target: throwing is done by digging the anterior edge of the flipper into the substrate and moving sand backward. Far more vigorous than sand pulling. H&E p. 18.
annotated source: Throwing motions
annotated property: definition

Alternate Hindlimb Throw
type: Class
subclass of: Throwing motions
has_obo_namespace: B8467
id: B8467:0000120
definition: When one hindlimb throws sand, the other rests with its ventral surface on the substrate and often moves in subtle ways... H&E p. 19.

Axiom
database_cross_reference: ETD:0000052
annotated target: When one hindlimb throws sand, the other rests with its ventral surface on the substrate and often moves in subtle ways... H&E p. 19.
annotated source: Alternate Hindlimb Throw
annotated property: definition

Diagonally Opposite Throw
type: Class
subclass of: Throwing motions
has_obo_namespace: B8467
id: B8467:0000121
definition: Diagonally opposite limbs throw sand nearly simultaneously. Front limb leads slightly. H&E p. 18, 19.

Axiom
annotated target: Diagonally opposite limbs throw sand nearly simultaneously. Front limb leads slightly. H&E p. 18, 19.
database_cross_reference: ETD:0000053
annotated source: Diagonally Opposite Throw
annotated property: definition

LF-RH Throw
type: Class
subclass of: Diagonally Opposite Throw
has_obo_namespace: B8467
id: B8467:0000122
definition: Nearly synchronous sand throwing movements of the left front and right hind limbs. Infered from parent.

Axiom
database_cross_reference: ETD:0000054
annotated target: Nearly synchronous sand throwing movements of the left front and right hind limbs. Infered from parent.
annotated source: LF-RH Throw
annotated property: definition

RF-LH Throw
type: Class
subclass of: Diagonally Opposite Throw
has_obo_namespace: B8467
id: B8467:0000123
definition: Nearly synchronous sand throwing movements of the right front and left hind limbs. Infered from parent.

Axiom
database_cross_reference: ETD:0000055
annotated target: Nearly synchronous sand throwing movements of the right front and left hind limbs. Infered from parent.
annotated source: RF-LH Throw
annotated property: definition

Synchronous Forelimb Throw
type: Class
subclass of: Throwing motions
has_obo_namespace: B8467
id: B8467:0000124
definition: Sweep sand backward to the sides of the turtle and scatter sand ove substrate and ... carapace. H&E p. 18.

Axiom
database_cross_reference: EDT:0000057
annotated target: Sweep sand backward to the sides of the turtle and scatter sand ove substrate and ... carapace. H&E p. 18.
annotated source: Synchronous Forelimb Throw
annotated property: definition

Synchronous Hindlimb Throw
type: Class
subclass of: Throwing motions
has_obo_namespace: B8467
id: B8467:0000125
definition: Follows Synchronous Forelimb Throw but not as vigorous and resembles Scoop/Pull motions. H&E p. 18.

Axiom
database_cross_reference: ETD:0000058
annotated target: Follows Synchronous Forelimb Throw but not as vigorous and resembles Scoop/Pull motions. H&E p. 18.
annotated source: Synchronous Hindlimb Throw
annotated property: definition

Sand smoothing
type: Class
subclass of: Action Pattern
has_obo_namespace: B8467
id: B8467:0000127
definition: Subtle motion of a hind leg occuring while the other is sand-throwing. H&E p. 19. Also may occur simultaneously with packing actions during Fill and Pack Chamber. H&E p. 17.

Axiom
database_cross_reference: ETD:0000037
annotated target: Subtle motion of a hind leg occuring while the other is sand-throwing. H&E p. 19. Also may occur simultaneously with packing actions during Fill and Pack Chamber. H&E p. 17.
annotated source: Sand smoothing
annotated property: definition

Synchronous forelimb thrust
type: Class
subclass of: Action Pattern
has_obo_namespace: B8467
id: B8467:0000128
definition: Thrust by both forelimbs; initial locomotor act in return to surf. H&E p. 20.

Axiom
database_cross_reference: ETD:0000050
annotated target: Thrust by both forelimbs; initial locomotor act in return to surf. H&E p. 20.
annotated source: Synchronous forelimb thrust
annotated property: definition

Quadrupedal Gait
type: Class
subclass of: Action Pattern
subclass of: Repeating Sequence
has_obo_namespace: B8467
id: B8467:0000129
definition: the usual gait of tetrapods, the footfall sequence of which is LH-LF-RH-RF-... H&E p. 4.

Axiom
database_cross_reference: ETD:0000017
annotated target: the usual gait of tetrapods, the footfall sequence of which is LH-LF-RH-RF-... H&E p. 4.
annotated source: Quadrupedal Gait
annotated property: definition

Loggerhead beach gait
type: Class
subclass of: Quadrupedal Gait
has_obo_namespace: B8467
id: B8467:0000130
definition: sea turtles are not supported entirely on the limbs; the loggerhead drags her mass by jerky thrusts. H&E p. 4, 5.

Axiom
database_cross_reference: ETD:0000018
annotated target: sea turtles are not supported entirely on the limbs; the loggerhead drags her mass by jerky thrusts. H&E p. 4, 5.
annotated source: Loggerhead beach gait
annotated property: definition

Change direction
type: Class
subclass of: Action sequence
definition: A change of direction with walking on the beach. H&E p. 5.
has_obo_namespace: B8467
id: B8467:0000131

Axiom
annotated target: A change of direction with walking on the beach. H&E p. 5.
database_cross_reference: ETD:0000059
annotated source: Change direction
annotated property: definition

Phototactic Response
type: Class
subclass of: Change direction
subclass of: Effect of inanimate process
has_obo_namespace: B8467
id: B8467:0000132
definition: Positive phototactic response reported by H&E p. 21.

Axiom
database_cross_reference: ETD:0000060
annotated target: Positive phototactic response reported by H&E p. 21.
annotated source: Phototactic Response
annotated property: definition

Turn to avoid obstacle
type: Class
subclass of: Change direction
subclass of: Effect of inanimate process
comment: Although bystanders are Agents, in this case generalizing to Physical Object is probably the appropriate abstraction.
has_obo_namespace: B8467
id: B8467:0000133
definition: Veer away from bystanders. H&E p.21.

Axiom
database_cross_reference: EDT:0000061
annotated target: Veer away from bystanders. H&E p.21.
annotated source: Turn to avoid obstacle
annotated property: definition

Turnabout
type: Class
subclass of: Change direction
has_obo_namespace: B8467
id: B8467:0000134
definition: Reverse direction by turning. In H&E, it usually refers to turning around to return to the surf. H&E p. 5.

Axiom
database_cross_reference: ETD:0000062
annotated target: Reverse direction by turning. In H&E, it usually refers to turning around to return to the surf. H&E p. 5.
annotated source: Turnabout
annotated property: definition

Turn in one spot
type: Class
subclass of: Turnabout
has_obo_namespace: B8467
id: B8467:0000135
definition: Turning around without changing position. H&E p. 5.

Axiom
database_cross_reference: ETD:0000063
annotated target: Turning around without changing position. H&E p. 5.
annotated source: Turn in one spot
annotated property: definition

Turn in small semi-circle
type: Class
subclass of: Turnabout
has_obo_namespace: B8467
id: B8467:0000136
definition: Turning around while not remaining in one place. H&E p. 5.

Axiom
database_cross_reference: ETD:0000064
annotated target: Turning around while not remaining in one place. H&E p. 5.
annotated source: Turn in small semi-circle
annotated property: definition

Body tilt
type: Class
subclass of: Body rotation
has_obo_namespace: B8467
id: B8467:0000137

Posterior Tilt Down
type: Class
subclass of: Body tilt
has_obo_namespace: B8467
id: B8467:0000138
definition: The push by the chin helps depress the body posteriorly. H&E p. 7,8.

Axiom
database_cross_reference: EDT:0000145
annotated target: The push by the chin helps depress the body posteriorly. H&E p. 7,8.
annotated source: Posterior Tilt Down
annotated property: definition

Posterior Tilt Up
type: Class
subclass of: Body tilt
has_obo_namespace: B8467
id: B8467:0000139
definition: Reverse of Posterior Tilt Down. H&E p. 11.

Axiom
database_cross_reference: ETD:0000151
annotated target: Reverse of Posterior Tilt Down. H&E p. 11.
annotated source: Posterior Tilt Up
annotated property: definition

Chin Pull
type: Class
subclass of: Folding
subclass of: Restriction
  on property: uses_part
  some values from: Chin
has_obo_namespace: B8467
id: B8467:0000140
definition: Female presses chin into sand and pushes briefly with the hindlimbs to effect a slight movement forward. H&E p. 8.

Axiom
database_cross_reference: ETD:0000095
annotated target: Female presses chin into sand and pushes briefly with the hindlimbs to effect a slight movement forward. H&E p. 8.
annotated source: Chin Pull
annotated property: definition

Drop egg
type: Class
subclass of: Expel
has_obo_namespace: B8467
id: B8467:0000141

Body rotation
type: Class
subclass of: Effect of action
has_obo_namespace: B8467
id: B8467:0000142

Posterior Shift Inward
type: Class
subclass of: Body rotation
has_obo_namespace: B8467
id: B8467:0000143
definition: Rotation of body around vertical axis, defined in terms of position and orientation of posterior end of body. Abstracted from children.

Axiom
database_cross_reference: ETD:0000152
annotated target: Rotation of body around vertical axis, defined in terms of position and orientation of posterior end of body. Abstracted from children.
annotated source: Posterior Shift Inward
annotated property: definition

Posterior Shift Inward during dig
type: Class
subclass of: Posterior Shift Inward
has_obo_namespace: B8467
id: B8467:0000144
comment: H&E collapsed this with its siblings.
definition: The body shifts so as to position the opposite hindlimb over the egg chamber. Inferred by author as necessarily due to actions of the forelimbs. H&E p. 10.

Axiom
database_cross_reference: ETD:0000153
annotated target: The body shifts so as to position the opposite hindlimb over the egg chamber. Inferred by author as necessarily due to actions of the forelimbs. H&E p. 10.
annotated source: Posterior Shift Inward during dig
annotated property: definition

Posterior Shift Inward during fill
type: Class
subclass of: Posterior Shift Inward
has_obo_namespace: B8467
id: B8467:0000145
comment: H&E collapsed this with its sibling.
definition: The posterior shifts in the direction of the extended hindlimb. H&E p. 17.

Axiom
database_cross_reference: ETD:0000156
annotated target: The posterior shifts in the direction of the extended hindlimb. H&E p. 17.
annotated source: Posterior Shift Inward during fill
annotated property: definition

Posterior Shift Outward
type: Class
subclass of: Body rotation
has_obo_namespace: B8467
id: B8467:0000146
definition: The body rotates around a vertical axis, described in terms of the position and orientation of the posterior end of the body. H&E p. 10,17.

Axiom
database_cross_reference: ETD:0000159
annotated target: The body rotates around a vertical axis, described in terms of the position and orientation of the posterior end of the body. H&E p. 10,17.
annotated source: Posterior Shift Outward
annotated property: definition

Move head
type: Class
subclass of: Folding
has_obo_namespace: B8467
id: B8467:0000147
definition: Turning, extending, etc. the head of the animal.

Axiom
database_cross_reference: ETD:0000099
annotated target: Turning, extending, etc. the head of the animal.
annotated source: Move head
annotated property: definition

Extend head
type: Class
subclass of: Extension
definition: As soon as laying is complete, the female extends her head (start of fill and pack). H&E p. 15.
has_obo_namespace: B8467
id: B8467:0000148

Axiom
annotated target: As soon as laying is complete, the female extends her head (start of fill and pack). H&E p. 15.
database_cross_reference: ETD:0000087
annotated source: Extend head
annotated property: definition

Head Raise
type: Class
subclass of: Move head
has_obo_namespace: B8467
id: B8467:0000149
definition: [departing turtles] raise their heads nearly vertically out the water after swimming out about 5 m from shore. H&E p. 21.

Axiom
database_cross_reference: ETD:0000100
annotated target: [departing turtles] raise their heads nearly vertically out the water after swimming out about 5 m from shore. H&E p. 21.
annotated source: Head Raise
annotated property: definition

Head-Turn
type: Class
subclass of: Move head
has_obo_namespace: B8467
id: B8467:0000150
definition: The head is (often) turned from side to side. H&E p. 4.

Axiom
database_cross_reference: ETD:0000101
annotated target: The head is (often) turned from side to side. H&E p. 4.
annotated source: Head-Turn
annotated property: definition

Move leg
type: Class
subclass of: Folding
has_obo_namespace: B8467
id: B8467:0000151

Himblimb Scoop/Pull
type: Class
subclass of: Folding
has_obo_namespace: B8467
id: B8467:0000157
definition: The action of a single leg during either the Synchronous or Alternate Hindlimb Scoop/Pull. H&E p. 15.

Axiom
database_cross_reference: ETD:0000097
annotated target: The action of a single leg during either the Synchronous or Alternate Hindlimb Scoop/Pull. H&E p. 15.
annotated source: Himblimb Scoop/Pull
annotated property: definition

Quadrupedal step
type: Class
subclass of: Move leg
has_obo_namespace: B8467
id: B8467:0000163
comment: Perhaps, considering the actor constraint, this should be contained in Loggerhead Beach Gait.
definition: The step patterns in the Quadrupedal Gait sequence. H&E p. 4.

Axiom
database_cross_reference: ETD:0000110
annotated target: The step patterns in the Quadrupedal Gait sequence. H&E p. 4.
annotated source: Quadrupedal step
annotated property: definition

Move LF in quadrupedal gait
type: Class
subclass of: Quadrupedal step
subclass of: Restriction
  on property: part of
  some values from: Loggerhead beach gait
has_obo_namespace: B8467
id: B8467:0000164
definition: Moving the left front leg in the loggerhead version of the quadrupedal gait. H&E p. 4.

Axiom
database_cross_reference: ETD:0000066
annotated target: Moving the left front leg in the loggerhead version of the quadrupedal gait. H&E p. 4.
annotated source: Move LF in quadrupedal gait
annotated property: definition

Move RF in quadrapedal gait
type: Class
subclass of: Quadrupedal step
subclass of: Restriction
  on property: part of
  some values from: Loggerhead beach gait
has_obo_namespace: B8467
id: B8467:0000165
definition: Moving the right front leg in the loggerhead version of the quadrupedal gait. H&E p. 4.

Axiom
database_cross_reference: ETD:0000068
annotated target: Moving the right front leg in the loggerhead version of the quadrupedal gait. H&E p. 4.
annotated source: Move RF in quadrapedal gait
annotated property: definition

Move LH in quadrupedal gait
type: Class
subclass of: Quadrupedal step
subclass of: Restriction
  on property: part of
  some values from: Loggerhead beach gait
has_obo_namespace: B8467
id: B8467:0000166
definition: Moving the left hind leg in the loggerhead version of the quadrupedal gait. H&E p. 4.

Axiom
database_cross_reference: ETD:0000067
annotated target: Moving the left hind leg in the loggerhead version of the quadrupedal gait. H&E p. 4.
annotated source: Move LH in quadrupedal gait
annotated property: definition

Move RH in quadrapedal gait
type: Class
subclass of: Quadrupedal step
subclass of: Restriction
  on property: part of
  some values from: Loggerhead beach gait
has_obo_namespace: B8467
id: B8467:0000167
definition: Moving the right hind leg in the loggerhead version of the quadrupedal gait. H&E p. 4.

Axiom
database_cross_reference: ETD:0000069
annotated target: Moving the right hind leg in the loggerhead version of the quadrupedal gait. H&E p. 4.
annotated source: Move RH in quadrapedal gait
annotated property: definition

Swimming motion
type: Class
subclass of: Move leg
has_obo_namespace: B8467
id: B8467:0000168
definition: Swimming stroke by one of the front flippers. H&E p. 21.

Axiom
database_cross_reference: ETD:0000117
annotated target: Swimming stroke by one of the front flippers. H&E p. 21.
annotated source: Swimming motion
annotated property: definition

Move RF in swimming
type: Class
subclass of: Swimming motion
definition: A single swimming stroke with the right front leg (flipper). Inferred from parent B8467:0000168.
has_obo_namespace: B8467
id: B8467:0000169

Axiom
annotated target: A single swimming stroke with the right front leg (flipper). Inferred from parent B8467:0000168.
database_cross_reference: ETD:0000119
annotated source: Move RF in swimming
annotated property: definition

Move LF in swimming
type: Class
subclass of: Swimming motion
definition: A single swimming stroke with the left front leg (flipper). Inferred from parent B8467:0000169.
has_obo_namespace: B8467
id: B8467:0000170

Axiom
annotated target: A single swimming stroke with the left front leg (flipper). Inferred from parent B8467:0000169.
database_cross_reference: ETD:0000118
annotated source: Move LF in swimming
annotated property: definition

Hind Limb Retract Up
type: Class
subclass of: Move leg
has_obo_namespace: B8467
id: B8467:0000171
definition: The flipper is retracted up out of the hole. H&E p. 11.

Axiom
database_cross_reference: ETD:0000102
annotated target: The flipper is retracted up out of the hole. H&E p. 11.
annotated source: Hind Limb Retract Up
annotated property: definition

Scoop
type: Class
subclass of: Move leg
has_obo_namespace: B8467
id: B8467:0000172
definition: The hindlimb scoops up the loose sand by curling the digits around it. H&E p. 11.

Axiom
database_cross_reference: ETD:0000111
annotated target: The hindlimb scoops up the loose sand by curling the digits around it. H&E p. 11.
annotated source: Scoop
annotated property: definition

Scoop/Shape
type: Class
subclass of: Move leg
has_obo_namespace: B8467
id: B8467:0000173
definition: Similar to Sccop/Pull except that the hindlimbs are vertically oriented and the ventral surface curls around the sand above the hole, shaping it into a pile. H&E p. 16.

Axiom
database_cross_reference: ETD:0000114
annotated target: Similar to Sccop/Pull except that the hindlimbs are vertically oriented and the ventral surface curls around the sand above the hole, shaping it into a pile. H&E p. 16.
annotated source: Scoop/Shape
annotated property: definition

LH Scoop/Shape
type: Class
subclass of: Scoop/Shape
has_obo_namespace: B8467
id: B8467:0000174
definition: Inferred from parent ETD:0000114.

Axiom
database_cross_reference: ETD:0000115
annotated target: Inferred from parent ETD:0000114.
annotated source: LH Scoop/Shape
annotated property: definition

RH Scoop/Shape
type: Class
subclass of: Scoop/Shape
has_obo_namespace: B8467
id: B8467:0000175
definition: Inferred from parent B8467:0000173.

Axiom
database_cross_reference: ETD:0000116
annotated target: Inferred from parent B8467:0000173.
annotated source: RH Scoop/Shape
annotated property: definition

Shape change
type: Class
subclass of: Action unit
definition: An action that at the physical level is a change in shape, e.g, no change in topology. Folds and expansions/contractions are the most common subtypes.
has_obo_namespace: B8467
id: B8467:0000176

Axiom
annotated target: An action that at the physical level is a change in shape, e.g, no change in topology. Folds and expansions/contractions are the most common subtypes.
database_cross_reference: ETD:0000201
annotated source: Shape change
annotated property: definition

Contraction
type: Class
subclass of: Shape change
has_obo_namespace: B8467
id: B8467:0000177

Extension
type: Class
subclass of: Shape change
has_obo_namespace: B8467
id: B8467:0000178

Extend cloacal tube
type: Class
subclass of: Extension
subclass of: Restriction
  on property: uses_part
  some values from: Cloacal Tube
has_obo_namespace: B8467
id: B8467:0000179
definition: The cloacal tube is extended downward. H&E p. 8, 12.

Axiom
database_cross_reference: ETD:0000084
annotated target: The cloacal tube is extended downward. H&E p. 8, 12.
annotated source: Extend cloacal tube
annotated property: definition

Extend cloacal tube during digging
type: Class
subclass of: Extend cloacal tube
has_obo_namespace: B8467
id: B8467:0000180
definition: The clocal tube is extended down to touch the substrate. H&E p. 8.

Axiom
database_cross_reference: ETD:0000085
annotated target: The clocal tube is extended down to touch the substrate. H&E p. 8.
annotated source: Extend cloacal tube during digging
annotated property: definition

Extend cloacal tube during laying
type: Class
subclass of: Extend cloacal tube
has_obo_namespace: B8467
id: B8467:0000181
definition: The clocal tube is extended downward into the egg chamber. H&E p. 12

Axiom
database_cross_reference: ETD:0000086
annotated target: The clocal tube is extended downward into the egg chamber. H&E p. 12
annotated source: Extend cloacal tube during laying
annotated property: definition

Extend neck
type: Class
subclass of: Extension
has_obo_namespace: B8467
id: B8467:0000182
definition: The neck bulges upward at the proximal end, and the wave of upward extension travels distally to the head. H&E p. 13.

Axiom
database_cross_reference: ETD:0000088
annotated target: The neck bulges upward at the proximal end, and the wave of upward extension travels distally to the head. H&E p. 13.
annotated source: Extend neck
annotated property: definition

Vocalization
type: Class
subclass of: Expel
has_obo_namespace: B8467
id: B8467:0000186

Laying Grunt
type: Class
subclass of: Vocalization
has_obo_namespace: B8467
id: B8467:0000187
definition: Brief, soft noise, vaguely grunt-like. H&E p. 13.

Axiom
annotated target: Brief, soft noise, vaguely grunt-like. H&E p. 13.
database_cross_reference: ETD:0000144
annotated source: Laying Grunt
annotated property: definition

Breath
type: Class
subclass of: Action Pattern
has_obo_namespace: B8467
id: B8467:0000188

Approach beach
type: Class
subclass of: Script phase
has_obo_namespace: B8467
id: B8467:0000189
definition: Swimming towards the beach. H&E p. 70.

Axiom
database_cross_reference: ETD:0000070
annotated target: Swimming towards the beach. H&E p. 70.
annotated source: Approach beach
annotated property: definition

Ascend beach
type: Class
subclass of: Script phase
subclass of: Restriction
  on property: follows
  some values from: Approach beach
has_obo_namespace: B8467
id: B8467:0000190
definition: Climbing up the beaching. H&E p. 4.

Axiom
annotated target: Climbing up the beaching. H&E p. 4.
database_cross_reference: ETD:0000071
annotated source: Ascend beach
annotated property: definition

Cover body pit
type: Class
subclass of: Script phase
subclass of: Restriction
  on property: follows
  some values from: Fill and pack chamber
has_obo_namespace: B8467
id: B8467:0000191
definition: Fill the body pit with sand. H&E p. 18.

Axiom
database_cross_reference: ETD:0000072
annotated target: Fill the body pit with sand. H&E p. 18.
annotated source: Cover body pit
annotated property: definition

Depart from beach
type: Class
subclass of: Script phase
subclass of: Restriction
  on property: follows
  some values from: Return to surf
has_obo_namespace: B8467
id: B8467:0000192
definition: Enter water and swim away. H&E p. 21.

Axiom
database_cross_reference: ETD:0000073
annotated target: Enter water and swim away. H&E p. 21.
annotated source: Depart from beach
annotated property: definition

Dig egg chamber
type: Class
subclass of: Script phase
subclass of: Restriction
  on property: follows
  some values from: Make body pit
has_obo_namespace: B8467
id: B8467:0000193
definition: Digging the sand cavity that will receive the eggs. H&E p. 9.

Axiom
annotated target: Digging the sand cavity that will receive the eggs. H&E p. 9.
database_cross_reference: ETD:0000074
annotated source: Dig egg chamber
annotated property: definition

Fill and pack chamber
type: Class
subclass of: Script phase
subclass of: Restriction
  on property: follows
  some values from: Lay eggs
has_obo_namespace: B8467
id: B8467:0000194
definition: Fill the egg cavity with sand and pack it down. H&E p. 15.

Axiom
database_cross_reference: ETD:0000075
annotated target: Fill the egg cavity with sand and pack it down. H&E p. 15.
annotated source: Fill and pack chamber
annotated property: definition

Initial sand-flicking
type: Class
subclass of: Script phase
has_obo_namespace: B8467
id: B8467:0000195
definition: The portion of Dig Egg Chamber that preceeds the 18 step Excavation Sequence. H&E p. 9.

Axiom
database_cross_reference: ETD:0000076
annotated target: The portion of Dig Egg Chamber that preceeds the 18 step Excavation Sequence. H&E p. 9.
annotated source: Initial sand-flicking
annotated property: definition

Lay eggs
type: Class
subclass of: Script phase
subclass of: Restriction
  on property: follows
  some values from: Dig egg chamber
has_obo_namespace: B8467
id: B8467:0000196
definition: Expel eggs into the egg chamber. H&E p. 12.

Axiom
database_cross_reference: ETD:0000077
annotated target: Expel eggs into the egg chamber. H&E p. 12.
annotated source: Lay eggs
annotated property: definition

LH posterolateral dump
type: Class
subclass of: Posterolateral sand dump
has_obo_namespace: B8467
id: B8467:0000197
definition: Inferred from parent. H&E p. 11, 10.

Axiom
database_cross_reference: EDT:0000011
annotated target: Inferred from parent. H&E p. 11, 10.
annotated source: LH posterolateral dump
annotated property: definition

Make body pit
type: Class
subclass of: Script phase
subclass of: Restriction
  on property: follows
  some values from: Wander over beach
has_obo_namespace: B8467
id: B8467:0000198
definition: Digging the depression where the body will rest during laying. H&E p. 7.

Axiom
annotated target: Digging the depression where the body will rest during laying. H&E p. 7.
database_cross_reference: ETD:0000078
annotated source: Make body pit
annotated property: definition

Return to surf
type: Class
subclass of: Script phase
subclass of: Restriction
  on property: follows
  some values from: Cover body pit
has_obo_namespace: B8467
id: B8467:0000199
definition: Walk down the beach to the surfline. H&E p. 20.

Axiom
database_cross_reference: ETD:0000079
annotated target: Walk down the beach to the surfline. H&E p. 20.
annotated source: Return to surf
annotated property: definition

LF sweep
type: Class
subclass of: Forelimb Sweep
has_obo_namespace: B8467
id: B8467:0000200
definition: Inferred from parent B8467:0000108.

Axiom
database_cross_reference: ETD:0000122
annotated target: Inferred from parent B8467:0000108.
annotated source: LF sweep
annotated property: definition

Wander over beach
type: Class
subclass of: Script phase
subclass of: Restriction
  on property: follows
  some values from: Ascend beach
has_obo_namespace: B8467
id: B8467:0000201
definition: The turtle is walking on the beach and presumed to be looking for a nesting site. H&E p. 6.

Axiom
database_cross_reference: ETD:0000081
annotated target: The turtle is walking on the beach and presumed to be looking for a nesting site. H&E p. 6.
annotated source: Wander over beach
annotated property: definition

Return on same track
type: Class
subclass of: Return to surf
has_obo_namespace: B8467
id: B8467:0000202
definition: Return to water, following the same course as in ascent. H&E p. 5.

Axiom
database_cross_reference: ETD:0000080
annotated target: Return to water, following the same course as in ascent. H&E p. 5.
annotated source: Return on same track
annotated property: definition

Human disturbance
type: Class
subclass of: Effect of external agent
definition: A human related event that causes the turtle to abandon the nesting sequence.
has_obo_namespace: B8467
id: B8467:0000203
comment: Humans are not necessarily the actors here, so leave this as an event.

Axiom
annotated target: A human related event that causes the turtle to abandon the nesting sequence.
database_cross_reference: ETD:0000172
annotated source: Human disturbance
annotated property: definition

Reproductive loss
type: Class
subclass of: Event with reproductive consequence
has_obo_namespace: B8467
id: B8467:0000204

Loss of eggs
type: Class
subclass of: Reproductive loss
has_obo_namespace: B8467
id: B8467:0000205

Egg predation
type: Class
subclass of: Loss of eggs
subclass of: Predation
has_obo_namespace: B8467
id: B8467:0000206
definition: Eggs are depredated.

Axiom
database_cross_reference: ETD:0000173
annotated target: Eggs are depredated.
annotated source: Egg predation
annotated property: definition

Rain induced suffication
type: Class
subclass of: Loss of eggs
subclass of: Effect of inanimate process
has_obo_namespace: B8467
id: B8467:0000207
definition: Eggs fail by sufficating in rain water.

Axiom
database_cross_reference: ETD:0000176
annotated target: Eggs fail by sufficating in rain water.
annotated source: Rain induced suffication
annotated property: definition

Loss of hatched young
type: Class
subclass of: Reproductive loss
has_obo_namespace: B8467
id: B8467:0000208

Hatchling predation
type: Class
subclass of: Loss of hatched young
subclass of: Predation
has_obo_namespace: B8467
id: B8467:0000209
definition: Hatched young are depredated.

Axiom
database_cross_reference: ETD:0000174
annotated target: Hatched young are depredated.
annotated source: Hatchling predation
annotated property: definition

Effect of action
type: Class
subclass of: Event by cause
has_obo_namespace: B8467
id: B8467:0000210

Displacement caused by action
type: Class
subclass of: Effect of action
has_obo_namespace: B8467
id: B8467:0000211

Body Move Forward
type: Class
subclass of: Displacement caused by action
has_obo_namespace: B8467
id: B8467:0000212

Inching
type: Class
subclass of: Body Move Forward
has_obo_namespace: B8467
id: B8467:0000213
definition: Inching seems to be due primarily to forward components of sand-throwing acts. H&E p. 20.

Axiom
database_cross_reference: ETD:0000168
annotated target: Inching seems to be due primarily to forward components of sand-throwing acts. H&E p. 20.
annotated source: Inching
annotated property: definition

Lurching
type: Class
subclass of: Body Move Forward
has_obo_namespace: B8467
id: B8467:0000214
definition: Lurching forwad results from pulling with the forelimbs and possibly the chin. H&E p. 20.

Axiom
database_cross_reference: ETD:0000169
annotated target: Lurching forwad results from pulling with the forelimbs and possibly the chin. H&E p. 20.
annotated source: Lurching
annotated property: definition

Effect of inanimate process
type: Class
subclass of: Event by cause
has_obo_namespace: B8467
id: B8467:0000216

Moved by wave action
type: Class
subclass of: Effect of inanimate process
definition: An object is moved by the action of a wave. H&E p. 4.
has_obo_namespace: B8467
id: B8467:0000217

Axiom
annotated target: An object is moved by the action of a wave. H&E p. 4.
database_cross_reference: ETD:00000175
annotated source: Moved by wave action
annotated property: definition

Pause posture
type: Class
subclass of: State
has_obo_namespace: B8467
id: B8467:0000218

Head-horizontal pause
type: Class
subclass of: Pause posture
definition: A pause where the neck is raised at a slightly oblique angle such that the head is off the substrate and the chin is held parallel to it. H&E p. 4, 5.
has_obo_namespace: B8467
id: B8467:0000219

Axiom
annotated target: A pause where the neck is raised at a slightly oblique angle such that the head is off the substrate and the chin is held parallel to it. H&E p. 4, 5.
database_cross_reference: ETD:0000180
annotated source: Head-horizontal pause
annotated property: definition

Head-raised pause
type: Class
subclass of: Pause posture
has_obo_namespace: B8467
id: B8467:0000220
definition: The neck is at a strongly oblique angle, which may be nearly vertical, and the head is raised noticably such that the nostrils are the highest point. H&E p. 4, 5.

Axiom
database_cross_reference: ETD:0000181
annotated target: The neck is at a strongly oblique angle, which may be nearly vertical, and the head is raised noticably such that the nostrils are the highest point. H&E p. 4, 5.
annotated source: Head-raised pause
annotated property: definition

Pause during make body pit
type: Class
subclass of: Head-raised pause
has_obo_namespace: B8467
id: B8467:0000221
definition: Inferred from parent B8467:0000220.

Axiom
database_cross_reference: ETD:0000183
annotated target: Inferred from parent B8467:0000220.
annotated source: Pause during make body pit
annotated property: definition

Pause during ascend beach
type: Class
subclass of: Head-raised pause
has_obo_namespace: B8467
id: B8467:0000222
definition: Inferred from parent B8467:0000220.

Axiom
database_cross_reference: ETD:0000182
annotated target: Inferred from parent B8467:0000220.
annotated source: Pause during ascend beach
annotated property: definition

Prostrate pause
type: Class
subclass of: Pause posture
has_obo_namespace: B8467
id: B8467:0000223
definition: Pause while the plastron of the turtle is on the substrate, the head is lowered so that her chin is on or in the sand. H&E p. 4, 5.

Axiom
database_cross_reference: ETD:0000184
annotated target: Pause while the plastron of the turtle is on the substrate, the head is lowered so that her chin is on or in the sand. H&E p. 4, 5.
annotated source: Prostrate pause
annotated property: definition

Pause after covering pit
type: Class
subclass of: Prostrate pause
has_obo_namespace: B8467
id: B8467:0000224
definition: Inferred from parent B8467:0000223.

Axiom
database_cross_reference: ETD:0000185
annotated target: Inferred from parent B8467:0000223.
annotated source: Pause after covering pit
annotated property: definition

Pause before entering surf
type: Class
subclass of: Prostrate pause
has_obo_namespace: B8467
id: B8467:0000225
definition: Inferred from parent B8467:0000223.

Axiom
database_cross_reference: ETD:0000186
annotated target: Inferred from parent B8467:0000223.
annotated source: Pause before entering surf
annotated property: definition

Vigilence
type: Class
subclass of: Pause posture
has_obo_namespace: B8467
id: B8467:0000226
definition: State of awareness.

Axiom
database_cross_reference: ETD:0000187
annotated target: State of awareness.
annotated source: Vigilence
annotated property: definition

Body part position
type: Class
subclass of: State
has_obo_namespace: B8467
id: B8467:0000227

Hind feet trailing laterally
type: Class
subclass of: Body part position
has_obo_namespace: B8467
id: B8467:0000228
definition: Position of hind feet during swimming. H&E p. 3, 4.

Axiom
database_cross_reference: ETD:0000177
annotated target: Position of hind feet during swimming. H&E p. 3, 4.
annotated source: Hind feet trailing laterally
annotated property: definition

Body support
type: Class
subclass of: State
has_obo_namespace: B8467
id: B8467:0000229

Support by medium
type: Class
subclass of: Body support
has_obo_namespace: B8467
id: B8467:0000230

Bouyed up by water
type: Class
subclass of: Support by medium
has_obo_namespace: B8467
id: B8467:0000231
definition: H&E p. 4

Axiom
database_cross_reference: ETD:0000178
annotated target: H&E p. 4
annotated source: Bouyed up by water
annotated property: definition

Support by substrate
type: Class
subclass of: Body support
has_obo_namespace: B8467
id: B8467:0000232
definition: H&E p. 4.

Axiom
database_cross_reference: ETD:0000179
annotated target: H&E p. 4.
annotated source: Support by substrate
annotated property: definition

Excavation sequence
type: Class
subclass of: Action Pattern
subclass of: Repeating Sequence
has_obo_namespace: B8467
id: B8467:0000233
definition: The cyclic sequence of 18 actions that constitutes the principle portion of digging the egg chamber. H&E p. 9

Axiom
database_cross_reference: ETD:0000003
annotated target: The cyclic sequence of 18 actions that constitutes the principle portion of digging the egg chamber. H&E p. 9
annotated source: Excavation sequence
annotated property: definition

Simple script
type: Class
subclass of: Action sequence
subclass of: Script
has_obo_namespace: B8467
id: B8467:0000234

Action unit
type: Class
subclass of: Action
has_obo_namespace: B8467
id: B8467:0000235

Topological change
type: Class
subclass of: Action unit
definition: A change in the topological properties of a surface, generally an oriface opening or closing.
has_obo_namespace: B8467
id: B8467:0000236

Axiom
annotated target: A change in the topological properties of a surface, generally an oriface opening or closing.
database_cross_reference: ETD:0000203
annotated source: Topological change
annotated property: definition

Open
type: Class
subclass of: Topological change
has_obo_namespace: B8467
id: B8467:0000237

Close
type: Class
subclass of: Topological change
has_obo_namespace: B8467
id: B8467:0000238

Engulf
type: Class
subclass of: Topological change
has_obo_namespace: B8467
id: B8467:0000239

Expel
type: Class
subclass of: Topological change
has_obo_namespace: B8467
id: B8467:0000240

Surface change
type: Class
subclass of: Action unit
definition: An action that involves a change in some property of a biological surface, for example color changes in squid. The surface remains intact (not a topological change) and does not change shape.
has_obo_namespace: B8467
id: B8467:0000241

Axiom
annotated target: An action that involves a change in some property of a biological surface, for example color changes in squid. The surface remains intact (not a topological change) and does not change shape.
database_cross_reference: ETD:0000202
annotated source: Surface change
annotated property: definition

Action sequence
type: Class
subclass of: Action group
has_obo_namespace: B8467
id: B8467:0000242

Effect of external agent
type: Class
subclass of: Event by cause
has_obo_namespace: B8467
id: B8467:0000243

Predation
type: Class
subclass of: Effect of external agent
has_obo_namespace: B8467
id: B8467:0000244

Script phase
type: Class
subclass of: Action group
has_related_synonym: <new synonym>
has_obo_namespace: B8467
id: B8467:0000245
has_related_synonym: Script phase
has_related_synonym: Script scene

RH posterolateral dump
type: Class
subclass of: Posterolateral sand dump
has_obo_namespace: B8467
id: B8467:0000246
definition: Inferred from parent. H&E p. 11, 10.

Axiom
database_cross_reference: EDT:0000012
annotated target: Inferred from parent. H&E p. 11, 10.
annotated source: RH posterolateral dump
annotated property: definition

Swim from beach
type: Class
subclass of: Swim
has_obo_namespace: B8467
id: B8467:0000247
definition: Swimming away from the beach. Pauses with head raises observed. H&E p.21

Axiom
database_cross_reference: ETD:0000048
annotated target: Swimming away from the beach. Pauses with head raises observed. H&E p.21
annotated source: Swim from beach
annotated property: definition

Swim towards beach
type: Class
subclass of: Swim
has_obo_namespace: B8467
id: B8467:0000248
definition: Swimming inferred by H&E p.3. Defined to end when body no longer supported by water.

Axiom
database_cross_reference: ETD:0000049
annotated target: Swimming inferred by H&E p.3. Defined to end when body no longer supported by water.
annotated source: Swim towards beach
annotated property: definition

Single Limb Throw
type: Class
subclass of: Throwing motions
has_obo_namespace: B8467
id: B8467:0000249
definition: Occasional independent throws of any limb. H&E p. 19.

Axiom
database_cross_reference: ETD:0000056
annotated target: Occasional independent throws of any limb. H&E p. 19.
annotated source: Single Limb Throw
annotated property: definition

Scrape/Dig
type: Class
subclass of: Action Pattern
has_obo_namespace: B8467
id: B8467:0000250
definition: Series of individual Scape/Dig units performed by one hindlimb.

Axiom
database_cross_reference: ETD:0000042
annotated target: Series of individual Scape/Dig units performed by one hindlimb.
annotated source: Scrape/Dig
annotated property: definition

LH Scrape/Dig
type: Class
subclass of: Scrape/Dig
has_obo_namespace: B8467
id: B8467:0000251
definition: Inferred from parent.

Axiom
database_cross_reference: ETD:0000043
annotated target: Inferred from parent.
annotated source: LH Scrape/Dig
annotated property: definition

RH Scrape/Dig
type: Class
subclass of: Scrape/Dig
has_obo_namespace: B8467
id: B8467:0000252
definition: Inferred from parent.

Axiom
database_cross_reference: ETD:0000044
annotated target: Inferred from parent.
annotated source: RH Scrape/Dig
annotated property: definition

Hind Flipper Raise
type: Class
subclass of: Action Pattern
definition: ...the hind flippers raise noticably at the distal ends and maintain the extension. ...appears to be primarily a rotation of the foot around the ankle joint. H&E p. 12.
has_obo_namespace: B8467
id: B8467:0000253

Axiom
annotated target: ...the hind flippers raise noticably at the distal ends and maintain the extension. ...appears to be primarily a rotation of the foot around the ankle joint. H&E p. 12.
database_cross_reference: ETD:0000004
annotated source: Hind Flipper Raise
annotated property: definition

Minor hindflipper raise/lower
type: Class
subclass of: Hind Flipper Raise
has_obo_namespace: B8467
id: B8467:0000254
definition: Sometimes...the hind flippers are raised and lowered slightly, but not held upward as during an egg-drop. H&E p.13.

Axiom
database_cross_reference: ETD:0000005
annotated target: Sometimes...the hind flippers are raised and lowered slightly, but not held upward as during an egg-drop. H&E p.13.
annotated source: Minor hindflipper raise/lower
annotated property: definition

RF sweep
type: Class
subclass of: Forelimb Sweep
has_obo_namespace: B8467
id: B8467:0000256
definition: Inferred from parent B8467:0000108.

Axiom
database_cross_reference: ETD:0000123
annotated target: Inferred from parent B8467:0000108.
annotated source: RF sweep
annotated property: definition

Rotation
type: Class
subclass of: Shape change
has_obo_namespace: B8467
id: B8467:0000257

Single hindflipper raise
type: Class
subclass of: Rotation
has_obo_namespace: B8467
id: B8467:0000258
definition: The individual rotations of the flippers in Hind Flipper Raise appear to be primarily a rotation of the foot about the ankle joint. Inferred from group. H&E p. 12.

Axiom
database_cross_reference: ETD:0000140
annotated target: The individual rotations of the flippers in Hind Flipper Raise appear to be primarily a rotation of the foot about the ankle joint. Inferred from group. H&E p. 12.
annotated source: Single hindflipper raise
annotated property: definition

LH flipper raise
type: Class
subclass of: Single hindflipper raise
has_obo_namespace: B8467
id: B8467:0000259
definition: Inferred from parent B8467:0000258.

Axiom
database_cross_reference: ETD:0000141
annotated target: Inferred from parent B8467:0000258.
annotated source: LH flipper raise
annotated property: definition

RH flipper raise
type: Class
subclass of: Single hindflipper raise
has_obo_namespace: B8467
id: B8467:0000260
definition: Inferred from parent B8467:0000258.

Axiom
database_cross_reference: ETD:0000142
annotated target: Inferred from parent B8467:0000258.
annotated source: RH flipper raise
annotated property: definition

Folding
type: Class
subclass of: Shape change
has_obo_namespace: B8467
id: B8467:0000261

Hindlimb Sweep
type: Class
subclass of: Sand Sweeping/Flicking
has_obo_namespace: B8467
id: B8467:0000262
definition: Hindlimbs are raised (similar to Forelimb Sweep) and brought nearly to the side of the carapace before sweeping the sand rearward. H&E p. 7, 8.

Axiom
database_cross_reference: ETD:0000124
annotated target: Hindlimbs are raised (similar to Forelimb Sweep) and brought nearly to the side of the carapace before sweeping the sand rearward. H&E p. 7, 8.
annotated source: Hindlimb Sweep
annotated property: definition

RH sweep
type: Class
subclass of: Hindlimb Sweep
has_obo_namespace: B8467
id: B8467:0000263
definition: Inferred from parent B8467:0000262.

Axiom
database_cross_reference: ETD:0000126
annotated target: Inferred from parent B8467:0000262.
annotated source: RH sweep
annotated property: definition

LH sweep
type: Class
subclass of: Hindlimb Sweep
has_obo_namespace: B8467
id: B8467:0000264
definition: Inferred from parent B8467:0000262.

Axiom
database_cross_reference: ETD:0000125
annotated target: Inferred from parent B8467:0000262.
annotated source: LH sweep
annotated property: definition

Chin Push
type: Class
subclass of: Folding
definition: ...it appears that her chin is pressed downward to support some mass, particularly during alternate sweeps of the hindlimbs. H&E p. 7
has_obo_namespace: B8467
id: B8467:0000265

Axiom
annotated target: ...it appears that her chin is pressed downward to support some mass, particularly during alternate sweeps of the hindlimbs. H&E p. 7
database_cross_reference: ETD:0000096
annotated source: Chin Push
annotated property: definition

LH Scoop/Pull
type: Class
subclass of: Himblimb Scoop/Pull
has_obo_namespace: B8467
id: B8467:0000266
definition: Left side version of Hindlimb Scoop/Pull (ETD:0000097). H&E p. 15,16.

Axiom
database_cross_reference: ETD:0000098
annotated target: Left side version of Hindlimb Scoop/Pull (ETD:0000097). H&E p. 15,16.
annotated source: LH Scoop/Pull
annotated property: definition

Forelimb throw
type: Class
subclass of: Sand Throwing
has_obo_namespace: B8467
id: B8467:0000267
definition: Throwing motion by a forelimb. Inferred from parent ETD:0000130.

Axiom
database_cross_reference: ETD:0000131
annotated target: Throwing motion by a forelimb. Inferred from parent ETD:0000130.
annotated source: Forelimb throw
annotated property: definition

Hindlimb throw
type: Class
subclass of: Sand Throwing
has_obo_namespace: B8467
id: B8467:0000268
definition: Throwing motion by hindlimb. Inferred from parent ETD:0000130.

Axiom
database_cross_reference: ETD:0000134
annotated target: Throwing motion by hindlimb. Inferred from parent ETD:0000130.
annotated source: Hindlimb throw
annotated property: definition

LF throw
type: Class
subclass of: Forelimb throw
has_obo_namespace: B8467
id: B8467:0000269
definition: Inferred from parent B8467:0000267.

Axiom
database_cross_reference: ETD:0000132
annotated target: Inferred from parent B8467:0000267.
annotated source: LF throw
annotated property: definition

RF throw
type: Class
subclass of: Forelimb throw
has_obo_namespace: B8467
id: B8467:0000270
definition: Inferred from parent B8467:0000267.

Axiom
database_cross_reference: ETD:0000133
annotated target: Inferred from parent B8467:0000267.
annotated source: RF throw
annotated property: definition

LH throw
type: Class
subclass of: Hindlimb throw
has_obo_namespace: B8467
id: B8467:0000271
definition: Inferred from parent B8467:0000268.

Axiom
database_cross_reference: ETD:0000135
annotated target: Inferred from parent B8467:0000268.
annotated source: LH throw
annotated property: definition

RH throw
type: Class
subclass of: Hindlimb throw
has_obo_namespace: B8467
id: B8467:0000272
definition: Inferred from parent B8467:0000268.

Axiom
database_cross_reference: ETD:0000136
annotated target: Inferred from parent B8467:0000268.
annotated source: RH throw
annotated property: definition

Leg push
type: Class
subclass of: Move leg
definition: A pushing motion with a limb. Inferred from Limb_Push, which actually refers to body displacements caused by this action. H&E p. 8.
has_obo_namespace: B8467
id: B8467:0000273

Axiom
annotated target: A pushing motion with a limb. Inferred from Limb_Push, which actually refers to body displacements caused by this action. H&E p. 8.
database_cross_reference: ETD:0000106
annotated source: Leg push
annotated property: definition

Push backward
type: Class
subclass of: Leg push
has_obo_namespace: B8467
id: B8467:0000274
definition: Pushing in a backward direction with a limb, e.g., as part of a quadrupedal gait.

Axiom
database_cross_reference: ETD:0000107
annotated target: Pushing in a backward direction with a limb, e.g., as part of a quadrupedal gait.
annotated source: Push backward
annotated property: definition

Push down
type: Class
subclass of: Leg push
has_obo_namespace: B8467
id: B8467:0000275
definition: Cause of Posterior Tilt Down during fill egg chamber. H&E p. 17.

Axiom
annotated target: Cause of Posterior Tilt Down during fill egg chamber. H&E p. 17.
database_cross_reference: ETD:0000108
annotated source: Push down
annotated property: definition

Retraction
type: Class
subclass of: Shape change
has_obo_namespace: B8467
id: B8467:0000276

Retract Cloacal Tube
type: Class
subclass of: Retraction
has_obo_namespace: B8467
id: B8467:0000277
definition: The cloacal tube was...then raised again. H&E p. 8 (not named). H&E Table 6.

Axiom
database_cross_reference: ETD:0000138
annotated target: The cloacal tube was...then raised again. H&E p. 8 (not named). H&E Table 6.
annotated source: Retract Cloacal Tube
annotated property: definition

Retract head
type: Class
subclass of: Retraction
has_obo_namespace: B8467
id: B8467:0000278
definition: The head pulls back to its original position. H&E p. 13.

Axiom
database_cross_reference: ETD:0000139
annotated target: The head pulls back to its original position. H&E p. 13.
annotated source: Retract head
annotated property: definition

Expansion
type: Class
subclass of: Shape change
has_obo_namespace: B8467
id: B8467:0000279

Throat Lower
type: Class
subclass of: Expansion
has_obo_namespace: B8467
id: B8467:0000280
definition: The skin of the throat is lowered during a Head-Horizonal Pause. H&E p. 4.

Axiom
database_cross_reference: ETD:000083
annotated target: The skin of the throat is lowered during a Head-Horizonal Pause. H&E p. 4.
annotated source: Throat Lower
annotated property: definition

RH retract up
type: Class
subclass of: Hind Limb Retract Up
has_obo_namespace: B8467
id: B8467:0000281
definition: Inferred from parent B8467:0000171.

Axiom
database_cross_reference: ETD:0000104
annotated target: Inferred from parent B8467:0000171.
annotated source: RH retract up
annotated property: definition

LH retract up
type: Class
subclass of: Hind Limb Retract Up
has_obo_namespace: B8467
id: B8467:0000282
definition: Inferred from parent B8467:0000171.

Axiom
database_cross_reference: ETD:0000103
annotated target: Inferred from parent B8467:0000171.
annotated source: LH retract up
annotated property: definition

Hindlimb Sand Pull
type: Class
subclass of: Move leg
has_obo_namespace: B8467
id: B8467:0000283
definition: The motion of the active limb in Single Hindlimb Pull. H&E p. 15, 16.

Axiom
database_cross_reference: ETD:0000105
annotated target: The motion of the active limb in Single Hindlimb Pull. H&E p. 15, 16.
annotated source: Hindlimb Sand Pull
annotated property: definition

LH pull
type: Class
subclass of: Hindlimb Sand Pull
subclass of: Restriction
  on property: part of
  some values from: Synchronous HL Scoop/Pull
subclass of: Restriction
  on property: part of
  some values from: Single Hindlimb Scoop/Pull
subclass of: Restriction
  on property: part of
  some values from: Alternate Hindlimb Scoop/Pull
has_obo_namespace: B8467
id: B8467:0000284
definition: Inferred from parent B8467:0000283.

Axiom
database_cross_reference: ETD:0000030
annotated target: Inferred from parent B8467:0000283.
annotated source: LH pull
annotated property: definition

RH pull
type: Class
subclass of: Hindlimb Sand Pull
subclass of: Restriction
  on property: part of
  some values from: Synchronous HL Scoop/Pull
subclass of: Restriction
  on property: part of
  some values from: Single Hindlimb Scoop/Pull
subclass of: Restriction
  on property: part of
  some values from: Alternate Hindlimb Scoop/Pull
has_obo_namespace: B8467
id: B8467:0000285
definition: Inferred from parent B8467:0000283.

Axiom
database_cross_reference: ETD:0000031
annotated target: Inferred from parent B8467:0000283.
annotated source: RH pull
annotated property: definition

Scrape/Dig unit
type: Class
subclass of: Folding
has_obo_namespace: B8467
id: B8467:0000286
definition: The hind flipper digs by scraping along the ipsilateral edge of the chamber with a downward movement. H&E p. 10.

Axiom
database_cross_reference: ETD:0000137
annotated target: The hind flipper digs by scraping along the ipsilateral edge of the chamber with a downward movement. H&E p. 10.
annotated source: Scrape/Dig unit
annotated property: definition

Packing action
type: Class
subclass of: Move leg
has_obo_namespace: B8467
id: B8467:0000287
definition: Superclass of the two types of packing action observed during the Sand-packing phase. H&E p. 16,17

Axiom
database_cross_reference: ETD:0000109
annotated target: Superclass of the two types of packing action observed during the Sand-packing phase. H&E p. 16,17
annotated source: Packing action
annotated property: definition

LH Scrape/Dig unit
type: Class
subclass of: Scrape/Dig unit
subclass of: Restriction
  on property: part of
  some values from: LH Scrape/Dig
has_obo_namespace: B8467
id: B8467:0000288
definition: Inferred from parent B8467:0000286.

Axiom
database_cross_reference: ETD:0000045
annotated target: Inferred from parent B8467:0000286.
annotated source: LH Scrape/Dig unit
annotated property: definition

RH Scrape/Dig unit
type: Class
subclass of: Scrape/Dig unit
subclass of: Restriction
  on property: part of
  some values from: RH Scrape/Dig
has_obo_namespace: B8467
id: B8467:0000289
definition: Inferred from parent B8467:0000286.

Axiom
database_cross_reference: ETD:0000046
annotated target: Inferred from parent B8467:0000286.
annotated source: RH Scrape/Dig unit
annotated property: definition

LH Scoop
type: Class
subclass of: Scoop
has_obo_namespace: B8467
id: B8467:0000290
definition: Inferred from parent B8467:0000172.

Axiom
database_cross_reference: ETD:0000112
annotated target: Inferred from parent B8467:0000172.
annotated source: LH Scoop
annotated property: definition

RH Scoop
type: Class
subclass of: Scoop
has_obo_namespace: B8467
id: B8467:0000291
definition: Inferred from parent ETD:0000111.

Axiom
database_cross_reference: ETD:0000113
annotated target: Inferred from parent ETD:0000111.
annotated source: RH Scoop
annotated property: definition

Throat Raise
type: Class
subclass of: Contraction
has_obo_namespace: B8467
id: B8467:0000292
definition: The skin of the throat is raised during a Head-horizonal Pause. H&E p. 4.

Axiom
database_cross_reference: ETD:0000082
annotated target: The skin of the throat is raised during a Head-horizonal Pause. H&E p. 4.
annotated source: Throat Raise
annotated property: definition

Hindlimb Extend Down
type: Class
subclass of: Move leg
comment: Although H&E use the term extend, and the distal end of the limb is further from the body center, this still seems more like a fold.
has_obo_namespace: B8467
id: B8467:0000293
definition: Hindlimb is extended down into the [egg] chamber, ... ventral surface is facing the animal's midline. H&E p. 10.

Axiom
database_cross_reference: ETD:0000089
annotated target: Hindlimb is extended down into the [egg] chamber, ... ventral surface is facing the animal's midline. H&E p. 10.
annotated source: Hindlimb Extend Down
annotated property: definition

LH Extend Down
type: Class
subclass of: Hindlimb Extend Down
has_obo_namespace: B8467
id: B8467:0000294
definition: Inferred from parent B8467:0000293.

Axiom
database_cross_reference: ETD:0000090
annotated target: Inferred from parent B8467:0000293.
annotated source: LH Extend Down
annotated property: definition

RH Extend Down
type: Class
subclass of: Hindlimb Extend Down
has_obo_namespace: B8467
id: B8467:0000295
definition: Inferred from parent B8467:0000293.

Axiom
database_cross_reference: ETD:0000091
annotated target: Inferred from parent B8467:0000293.
annotated source: RH Extend Down
annotated property: definition

Hindlimb Extend Out
type: Class
subclass of: Move leg
comment: Although H&E use the term extend, and the distal end of the limb is further from the body center, this still seems more like a fold.
has_obo_namespace: B8467
id: B8467:0000296
definition: The distal part of the flipper is held upside down as it is extended posterolaterally behind the turtle. H&E p. 10, 11.

Axiom
database_cross_reference: ETD:0000092
annotated target: The distal part of the flipper is held upside down as it is extended posterolaterally behind the turtle. H&E p. 10, 11.
annotated source: Hindlimb Extend Out
annotated property: definition

LH Extend out
type: Class
subclass of: Hindlimb Extend Out
has_obo_namespace: B8467
id: B8467:0000297
definition: Inferred from parent B8467:0000296.

Axiom
database_cross_reference: ETD:0000093
annotated target: Inferred from parent B8467:0000296.
annotated source: LH Extend out
annotated property: definition

RH Extend out
type: Class
subclass of: Hindlimb Extend Out
has_obo_namespace: B8467
id: B8467:0000298
definition: Inferred from parent B8467:0000296.

Axiom
database_cross_reference: ETD:0000094
annotated target: Inferred from parent B8467:0000296.
annotated source: RH Extend out
annotated property: definition

Event by cause
type: Class
subclass of: Event
has_obo_namespace: B8467
id: B8467:0000299

Displacement from chin pull
type: Class
subclass of: Body Move Forward
has_obo_namespace: B8467
id: B8467:0000300
definition: Female presses her chin into the sand and pushes briefly with the hindlimbs to effect a slight movement forward to obliquely forward. H&E p. 8.

Axiom
database_cross_reference: ETD:0000167
annotated target: Female presses her chin into the sand and pushes briefly with the hindlimbs to effect a slight movement forward to obliquely forward. H&E p. 8.
annotated source: Displacement from chin pull
annotated property: definition

Body Move Forward during fill and pack
type: Class
subclass of: Body Move Forward
definition: A subtle movement of the body forward and sometimes obliquely to one side. It is difficult to tell how this movement takes place. H&E p. 17.
has_obo_namespace: B8467
id: B8467:0000301

Axiom
annotated target: A subtle movement of the body forward and sometimes obliquely to one side. It is difficult to tell how this movement takes place. H&E p. 17.
database_cross_reference: ETD:0000166
annotated source: Body Move Forward during fill and pack
annotated property: definition

Sweep Displacement
type: Class
subclass of: Displacement caused by action
has_obo_namespace: B8467
id: B8467:0000302
definition: Forward or rotational movement of the body occurs as an apparent concomitant of sand-sweeping. H&E p. 8.

Axiom
database_cross_reference: ETD:0000171
annotated target: Forward or rotational movement of the body occurs as an apparent concomitant of sand-sweeping. H&E p. 8.
annotated source: Sweep Displacement
annotated property: definition

Limb Push
type: Class
subclass of: Displacement caused by action
definition: A few movements of the body caused by brief pushing of one or more limbs, being lateral, forward, or rotational. H&E p. 8.
has_obo_namespace: B8467
id: B8467:0000303

Axiom
annotated target: A few movements of the body caused by brief pushing of one or more limbs, being lateral, forward, or rotational. H&E p. 8.
database_cross_reference: ETD:0000170
annotated source: Limb Push
annotated property: definition

Left Shift Inward during dig
type: Class
subclass of: Posterior Shift Inward during dig
has_obo_namespace: B8467
id: B8467:0000304
definition: Posterior shift enabling digging by the right flipper. Inferred from parent B8467:0000144.

Axiom
database_cross_reference: ETD:0000154
annotated target: Posterior shift enabling digging by the right flipper. Inferred from parent B8467:0000144.
annotated source: Left Shift Inward during dig
annotated property: definition

Right Shift Inward during dig
type: Class
subclass of: Posterior Shift Inward during dig
has_obo_namespace: B8467
id: B8467:0000305
definition: Posterior shift enabling digging by the left flipper. Inferred from parent B8467:0000144.

Axiom
database_cross_reference: ETD:0000155
annotated target: Posterior shift enabling digging by the left flipper. Inferred from parent B8467:0000144.
annotated source: Right Shift Inward during dig
annotated property: definition

Left Shift Inward during fill
type: Class
subclass of: Posterior Shift Inward during fill
has_obo_namespace: B8467
id: B8467:0000306
definition: Inferred from parent B8467:0000145.

Axiom
database_cross_reference: ETD:0000157
annotated target: Inferred from parent B8467:0000145.
annotated source: Left Shift Inward during fill
annotated property: definition

Right Shift Inward during fill
type: Class
subclass of: Posterior Shift Inward during fill
has_obo_namespace: B8467
id: B8467:0000307
definition: Inferred from parent B8467:0000145.

Axiom
database_cross_reference: ETD:0000158
annotated target: Inferred from parent B8467:0000145.
annotated source: Right Shift Inward during fill
annotated property: definition

Posterior Shift Outward during dig
type: Class
subclass of: Posterior Shift Outward
has_obo_namespace: B8467
id: B8467:0000308
comment: H&E collapsed this with its sibling.
definition: Refined from parent ETD:0000159. H&E p. 10, 11.

Axiom
database_cross_reference: ETD:0000160
annotated target: Refined from parent ETD:0000159. H&E p. 10, 11.
annotated source: Posterior Shift Outward during dig
annotated property: definition

Left Shift Outward during dig
type: Class
subclass of: Posterior Shift Outward during dig
has_obo_namespace: B8467
id: B8467:0000309
definition: Inferred from parent ETD:0000160.

Axiom
database_cross_reference: ETD:0000161
annotated target: Inferred from parent ETD:0000160.
annotated source: Left Shift Outward during dig
annotated property: definition

Right Shift Outward during dig
type: Class
subclass of: Posterior Shift Outward during dig
has_obo_namespace: B8467
id: B8467:0000310
definition: Inferred from parent ETD:0000160.

Axiom
database_cross_reference: ETD:0000162
annotated target: Inferred from parent ETD:0000160.
annotated source: Right Shift Outward during dig
annotated property: definition

Posterior Shift Outward during fill
type: Class
subclass of: Posterior Shift Outward
has_obo_namespace: B8467
id: B8467:0000311
comment: H&E collapsed this with its sibling.
definition: Inferred from parent ETD:0000159. H&E p. 17

Axiom
database_cross_reference: ETD:0000163
annotated target: Inferred from parent ETD:0000159. H&E p. 17
annotated source: Posterior Shift Outward during fill
annotated property: definition

Left Shift Outward during fill
type: Class
subclass of: Posterior Shift Outward during fill
has_obo_namespace: B8467
id: B8467:0000312
definition: Inferred from parent ETD:0000163.

Axiom
database_cross_reference: ETD:0000164
annotated target: Inferred from parent ETD:0000163.
annotated source: Left Shift Outward during fill
annotated property: definition

Right Shift Outward during fill
type: Class
subclass of: Posterior Shift Outward during fill
has_obo_namespace: B8467
id: B8467:0000313
definition: Inferred from parent ETD:0000163.

Axiom
database_cross_reference: ETD:0000165
annotated target: Inferred from parent ETD:0000163.
annotated source: Right Shift Outward during fill
annotated property: definition

Posterior Tilt Down during make body pit
type: Class
subclass of: Posterior Tilt Down
has_obo_namespace: B8467
id: B8467:0000314
comment: H&E collapsed this with its siblings, though the figures show differences.
definition: The push by the chin helps depress the body posteriorly. H&E p. 7, 8.

Axiom
database_cross_reference: ETD:0000150
annotated target: The push by the chin helps depress the body posteriorly. H&E p. 7, 8.
annotated source: Posterior Tilt Down during make body pit
annotated property: definition

Posterior Tilt Down during dig egg chamber
type: Class
subclass of: Posterior Tilt Down
has_obo_namespace: B8467
id: B8467:0000315
comment: H&E collapse this with its siblings, though the figures show differences.
definition: The whole body tilts downward at the rear, this tilting action is due to the forelimbs (and possibly chin) pushing into the substrate anteriorly. H&E p. 10.

Axiom
database_cross_reference: EDT:0000146
annotated target: The whole body tilts downward at the rear, this tilting action is due to the forelimbs (and possibly chin) pushing into the substrate anteriorly. H&E p. 10.
annotated source: Posterior Tilt Down during dig egg chamber
annotated property: definition

Posterior Tilt Down with LH extended
type: Class
subclass of: Posterior Tilt Down during dig egg chamber
has_obo_namespace: B8467
id: B8467:0000316
definition: Inferred from parent B8467:0000315. H&E Figure 4d.

Axiom
database_cross_reference: ETD:0000147
annotated target: Inferred from parent B8467:0000315. H&E Figure 4d.
annotated source: Posterior Tilt Down with LH extended
annotated property: definition

Posterior Tilt Down with RH extended
type: Class
subclass of: Posterior Tilt Down during dig egg chamber
has_obo_namespace: B8467
id: B8467:0000317
definition: Inferred from parent B8467:0000315. Reflection of B8467:0000316.

Axiom
database_cross_reference: ETD:0000148
annotated target: Inferred from parent B8467:0000315. Reflection of B8467:0000316.
annotated source: Posterior Tilt Down with RH extended
annotated property: definition

Posterior Tilt Down during fill and pack chamber
type: Class
subclass of: Posterior Tilt Down
has_obo_namespace: B8467
id: B8467:0000318
comment: H&E collapse this with its siblings though the figures show differences.
definition: Tilt occurs during compacting and appears to be the result of the forelimbs and the chin pushing down. H&E p. 19.

Axiom
database_cross_reference: ETD:0000149
annotated target: Tilt occurs during compacting and appears to be the result of the forelimbs and the chin pushing down. H&E p. 19.
annotated source: Posterior Tilt Down during fill and pack chamber
annotated property: definition

Event by consequence
type: Class
subclass of: Event
has_obo_namespace: B8467
id: B8467:0000319

Event with reproductive consequence
type: Class
subclass of: Event by consequence
has_obo_namespace: B8467
id: B8467:0000320

Anchor leg
type: Class
subclass of: Action Pattern
has_obo_namespace: B8467
id: B8467:0000321
definition: This is a test

Axiom
database_cross_reference: ETD:0000001
annotated target: This is a test
annotated source: Anchor leg
annotated property: definition

LH Sand flick
type: Class
subclass of: Hindlimb sand flicks
has_obo_namespace: B8467
id: B8467:0000322
definition: Flicking motion with the left hindleg. H&E p. 9-10.

Axiom
database_cross_reference: EDT:0000014
annotated target: Flicking motion with the left hindleg. H&E p. 9-10.
annotated source: LH Sand flick
annotated property: definition

Sequence
type: Class
subclass of: Process
has_obo_namespace: B8467
id: B8467:0000323

RH Sand flick
type: Class
subclass of: Hindlimb sand flicks
has_obo_namespace: B8467
id: B8467:0000326
definition: Flicking motion with the right hindlimb. H&E p. 9-10.

Axiom
database_cross_reference: EDT:0000015
annotated target: Flicking motion with the right hindlimb. H&E p. 9-10.
annotated source: RH Sand flick
annotated property: definition

Process
type: Class
subclass of: Intangible
has_obo_namespace: B8467
id: EKBE:0000047

Event
type: Class
subclass of: Process
has_obo_namespace: B8467
id: EKBE:0000048

Action
type: Class
subclass of: Event
has_obo_namespace: B8467
id: EKBE:0000049

Action Pattern
type: Class
subclass of: Action group
has_obo_namespace: B8467
id: EKBE:0000050

Script
type: Class
subclass of: Sequence
has_obo_namespace: B8467
id: EKBE:0000052

State
type: Class
subclass of: Process
has_obo_namespace: B8467
id: EKBE:0000053

Action group
type: Class
subclass of: Action
has_obo_namespace: B8467
id: EKBE:0000054

Repeating Sequence
type: Class
subclass of: Sequence
subclass of: Action group
has_obo_namespace: B8467
id: EKBE:0000055

EKB
type: Class
has_obo_namespace: B8467
id: EKB:0000000

Location
type: Class
subclass of: Restriction
  on property: part of
  some values from: EKB
has_obo_namespace: B8467
id: EKB:0000001

Tangible
type: Class
subclass of: Restriction
  on property: part of
  some values from: EKB
has_obo_namespace: B8467
id: EKB:0000002

Intangible
type: Class
subclass of: Restriction
  on property: part of
  some values from: EKB
has_obo_namespace: B8467
id: EKB:0000003

Relative Location
type: Class
subclass of: Location
has_obo_namespace: B8467
id: EKB:0000004

Absolute Location
type: Class
subclass of: Location
has_obo_namespace: B8467
id: EKB:0000005

Substrate
type: Class
subclass of: Relative Location
has_obo_namespace: B8467
id: EKB:0000006

Medium
type: Class
subclass of: Relative Location
has_obo_namespace: B8467
id: EKB:0000007

Physical Object
type: Class
subclass of: Tangible
has_obo_namespace: B8467
id: EKB:0000008

Stuff
type: Class
subclass of: Tangible
has_obo_namespace: B8467
id: EKB:0000009

Biological
type: Class
subclass of: Physical Object
has_obo_namespace: B8467
id: EKB:0000010

Organism
type: Class
subclass of: Biological
has_obo_namespace: B8467
id: EKB:0000011

Part of Organism
type: Class
subclass of: Biological
has_obo_namespace: B8467
id: EKB:0000012

Schema
type: Class
subclass of: Intangible
has_obo_namespace: B8467
id: EKB:0000013

Shape
type: Class
subclass of: Schema
has_obo_namespace: B8467
id: EKB:0000014

2D Shape
type: Class
subclass of: Shape
has_obo_namespace: B8467
id: EKB:0000015

3D Shape
type: Class
subclass of: Shape
has_obo_namespace: B8467
id: EKB:0000016

Coordinate System
type: Class
subclass of: Schema
has_obo_namespace: B8467
id: EKB:0000017

Phylogenetic Node
type: Class
subclass of: Schema
has_obo_namespace: B8467
id: EKB:0000018

Information
type: Class
subclass of: Intangible
has_obo_namespace: B8467
id: EKB:0000019

Description
type: Class
subclass of: Information
has_obo_namespace: B8467
id: EKB:0000020

Explanation
type: Class
subclass of: Information
has_obo_namespace: B8467
id: EKB:0000021

Functional Explanation
type: Class
subclass of: Explanation
definition: An explanation of an action in terms of a function or benefit to the actor originating the action.
has_obo_namespace: B8467
id: EKB:0000022

Axiom
annotated target: An explanation of an action in terms of a function or benefit to the actor originating the action.
database_cross_reference: ETD:0000191
annotated source: Functional Explanation
annotated property: definition

Nutritive Function
type: Class
subclass of: Functional Explanation
definition: An explanation in terms of the actor gaining access to nutrients and energy.
has_obo_namespace: B8467
id: EKB:0000024

Axiom
annotated target: An explanation in terms of the actor gaining access to nutrients and energy.
database_cross_reference: ETD:0000194
annotated source: Nutritive Function
annotated property: definition

Antipredator Function
type: Class
subclass of: Functional Explanation
definition: An explanation in terms of the actor or owner avoiding or responding to predation.
has_obo_namespace: B8467
id: EKB:0000025

Axiom
annotated target: An explanation in terms of the actor or owner avoiding or responding to predation.
database_cross_reference: ETD:0000192
annotated source: Antipredator Function
annotated property: definition

Social Function
type: Class
subclass of: Functional Explanation
definition: An explanation in terms of the actor's social state (e.g., status, obligations, etc.).
has_obo_namespace: B8467
id: EKB:0000026

Axiom
annotated target: An explanation in terms of the actor's social state (e.g., status, obligations, etc.).
database_cross_reference: ETD:0000197
annotated source: Social Function
annotated property: definition

Maintanance Function
type: Class
subclass of: Functional Explanation
definition: An explanation of an action in terms of maintaining the actor's physiological or mechanical condition.
has_obo_namespace: B8467
id: EKB:0000027

Axiom
annotated target: An explanation of an action in terms of maintaining the actor's physiological or mechanical condition.
database_cross_reference: ETD:0000193
annotated source: Maintanance Function
annotated property: definition

Sensory Function
type: Class
subclass of: Functional Explanation
definition: An explanation in terms of the actor gaining or increasing access to information about its environment via its senses.
has_obo_namespace: B8467
id: EKB:0000028

Axiom
annotated target: An explanation in terms of the actor gaining or increasing access to information about its environment via its senses.
database_cross_reference: ETD:0000196
annotated source: Sensory Function
annotated property: definition

Ontogenetic Explanation
type: Class
subclass of: Explanation
definition: An explanation in terms of the actor's life history stage.
has_obo_namespace: B8467
id: EKB:0000029

Axiom
annotated target: An explanation in terms of the actor's life history stage.
database_cross_reference: ETD:0000199
annotated source: Ontogenetic Explanation
annotated property: definition

Phylogenetic Explanation
type: Class
subclass of: Explanation
definition: An explanation in terms of contraints due to phylogenetic history.
has_obo_namespace: B8467
id: EKB:0000030

Axiom
annotated target: An explanation in terms of contraints due to phylogenetic history.
database_cross_reference: ETD:0000200
annotated source: Phylogenetic Explanation
annotated property: definition

Mechanistic Explanation
type: Class
subclass of: Explanation
definition: An explanation of an action in terms of constraints imposed by physiological, neural, or biomechanical mechanisms.
has_obo_namespace: B8467
id: EKB:0000031

Axiom
annotated target: An explanation of an action in terms of constraints imposed by physiological, neural, or biomechanical mechanisms.
database_cross_reference: ETD:0000198
annotated source: Mechanistic Explanation
annotated property: definition

Measure
type: Class
subclass of: Information
has_obo_namespace: B8467
id: EKB:0000032

Angle Measure
type: Class
subclass of: Continuous Value
has_obo_namespace: B8467
id: EKB:0000033

Statistical Value
type: Class
subclass of: Measure
has_obo_namespace: B8467
id: EKB:0000034

Discrete Value
type: Class
subclass of: Measure
has_obo_namespace: B8467
id: EKB:0000035

Temporal Measure
type: Class
subclass of: Continuous Value
has_obo_namespace: B8467
id: EKB:0000036

Distance Measure
type: Class
subclass of: Continuous Value
has_obo_namespace: B8467
id: EKB:0000037

Mass Measure
type: Class
subclass of: Continuous Value
has_obo_namespace: B8467
id: EKB:0000038

Continuous Value
type: Class
subclass of: Measure
has_obo_namespace: B8467
id: EKB:0000039

Complex Measure
type: Class
subclass of: Continuous Value
has_obo_namespace: B8467
id: EKB:0000040

Parametric Statistic
type: Class
subclass of: Statistical Value
has_obo_namespace: B8467
id: EKB:0000041

NonParametric Statistic
type: Class
subclass of: Statistical Value
has_obo_namespace: B8467
id: EKB:0000042

Count
type: Class
subclass of: Discrete Value
has_obo_namespace: B8467
id: EKB:0000043

Ordered Value
type: Class
subclass of: Nomial Value
has_obo_namespace: B8467
id: EKB:0000044

Nomial Value
type: Class
subclass of: Discrete Value
has_obo_namespace: B8467
id: EKB:0000045

Binary Value
type: Class
subclass of: Nomial Value
has_obo_namespace: B8467
id: EKB:0000046

Cloacal Tube
type: Class
subclass of: Part of Organism
subclass of: Restriction
  on property: part of
  some values from: Caretta caretta
has_obo_namespace: B8467
id: GO:0000081