Ontology for describing data on neurodegenerative diseases in patients
type: Ontology
version IRI: http://www.purl.org/NDDO/1.0
imports: external
imports: AD
imports: PD
format: OWL
license: https://creativecommons.org/licenses/by/4.0/
contributor: Pance Panov
contributor: Ilin Tolovski
contributor: Ana Kostovska
creator: Pance Panov

OntoDT: hasDatatypeRole
type: ObjectProperty
sub property of: topObjectProperty
inverse of: OntoDT: datatypeRoleOf

OntoDT: datatypeRoleOf
type: ObjectProperty
sub property of: topObjectProperty

roleOf
type: ObjectProperty

OntoDT: hasIdentifier
type: ObjectProperty
sub property of: OntoDT:hasMember

OntoDT:hasMember
type: ObjectProperty

OntoDT: hasFieldComponent
type: ObjectProperty
sub property of: OntoDT:hasMember

OntoDT: hasAlternativeComponent
type: ObjectProperty
sub property of: OntoDT:hasMember
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

hasAgent
type: ObjectProperty
sub property of: topObjectProperty

expressedIn
type: ObjectProperty
sub property of: topObjectProperty

extractedFrom
type: ObjectProperty
sub property of: topObjectProperty

hasDatatype
type: ObjectProperty
sub property of: topObjectProperty

hasID
type: ObjectProperty
sub property of: topObjectProperty

hasInformation
type: ObjectProperty
sub property of: topObjectProperty

hasInput
type: ObjectProperty
sub property of: topObjectProperty

hasOutput
type: ObjectProperty
sub property of: topObjectProperty

isOfGender
type: ObjectProperty
sub property of: topObjectProperty

isOutputOf
type: ObjectProperty
sub property of: topObjectProperty

isPreceededBy
type: ObjectProperty
sub property of: topObjectProperty

occuresAt
type: ObjectProperty
sub property of: topObjectProperty

originatesFrom
type: ObjectProperty
sub property of: topObjectProperty

hasDate
type: DatatypeProperty
sub property of: topDataProperty

hasValue
type: DatatypeProperty
sub property of: topDataProperty

OntoDT: datatype role
type: Class
subclass of: BFO_0000023
subclass of: Restriction
  on property: OntoDT: datatypeRoleOf
  some values from: OntoDT: datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

StringDatatype
type: Class
subclass of: OntoDT: defined datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: primitive datatype
type: Class
subclass of: OntoDT: datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: field component
type: Class
subclass of: OntoDT: datatype role
subclass of: Restriction
  on property: OntoDT: hasIdentifier
  some values from: OntoDT: field identifier
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: alternative component
type: Class
subclass of: OntoDT: datatype role
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: real datatype
type: Class
subclass of: OntoDT: numeric ordered primitive datatype

OntoDT: generated datatype
type: Class
subclass of: OntoDT: datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: discrete field component
type: Class
subclass of: OntoDT: primitive field component
subclass of: Restriction
  on property: OntoDT: datatypeRoleOf
  some values from: OntoDT: discrete datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDM

OntoDT: defined datatype
type: Class
subclass of: OntoDT: datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: aggregate datatype
type: Class
subclass of: OntoDT: generated datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: choice datatype
type: Class
subclass of: OntoDT: non-aggregate datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: real field component
type: Class
subclass of: OntoDT: primitive field component
subclass of: Restriction
  on property: OntoDT: datatypeRoleOf
  some values from: OntoDT: real datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: date and time datatype
type: Class
subclass of: OntoDT: non-numeric ordered primitive datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: datatype
type: Class
subclass of: OBI: data representational model
IAO_0000114: IAO_0000228
IAO_0000412: Generic Ontology of Datatypes (OntoDT)

OntoDT: record of primitives datatype
type: Class
subclass of: OntoDT: record datatype
subclass of: Restriction
  on property: OntoDT: hasFieldComponent
  some values from: OntoDT: primitive field component
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: discrete datatype
type: Class
subclass of: OntoDT: non-numeric unordered primitive datatype
IAO_0000412: OntoDT

OntoDT: sequence datatype
type: Class
subclass of: OntoDT: aggregate datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: non-aggregate datatype
type: Class
subclass of: OntoDT: generated datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: record datatype
type: Class
subclass of: OntoDT: aggregate datatype
subclass of: Restriction
  on property: OntoDT: hasFieldComponent
  some values from: OntoDT: field component

OntoDT: aggregate field component
type: Class
subclass of: OntoDT: field component
subclass of: Restriction
  on property: OntoDT: datatypeRoleOf
  some values from: OntoDT: aggregate datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: field identifier
type: Class
subclass of: OntoDT: identifier
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: primitive field component
type: Class
subclass of: OntoDT: field component
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

assay design
type: Class
subclass of: IAO_0000104

study specification
type: Class

DM-dataset
type: Class
subclass of: IAO_0000100
subclass of: Restriction
  on property: BFO_0000051
  some values from: data example

data example
type: Class
subclass of: IAO_0000027
subclass of: Restriction
  on property: BFO_0000050
  some values from: DM-dataset
subclass of: Restriction
  on property: hasDatatype
  some values from: OntoDT: record datatype

OntoDT: void datatype
type: Class
subclass of: OntoDT: primitive datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: boolean datatype
type: Class
subclass of: OntoDT: non-numeric unordered primitive datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: integer datatype
type: Class
subclass of: OntoDT: numeric ordered primitive datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: extended datatype
type: Class
subclass of: OBI: data representational model
IAO_0000114: IAO_0000228

OntoDT: non-numeric primitive datatype
type: Class
subclass of: OntoDT: primitive datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: numeric primitive datatype
type: Class
subclass of: OntoDT: primitive datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: numeric ordered primitive datatype
type: Class
subclass of: OntoDT: numeric primitive datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: non-numeric unordered primitive datatype
type: Class
subclass of: OntoDT: non-numeric primitive datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: non-numeric ordered primitive datatype
type: Class
subclass of: OntoDT: non-numeric primitive datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: descriptive data without missing values component
type: Class
subclass of: OntoDT: aggregate field component
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: descriptive record of primitives without missing values field component
type: Class
subclass of: OntoDT: descriptive data without missing values component
subclass of: Restriction
  on property: OntoDT: datatypeRoleOf
  some values from: OntoDT: record of primitives datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: positive integer
type: Class
subclass of: OntoDT: extended datatype

OntoDT: unlabeled data with missing values
type: Class
subclass of: Restriction
  on property: OntoDT: hasFieldComponent
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: primitive alternative component
type: Class
subclass of: OntoDT: alternative component
subclass of: Restriction
  on property: OntoDT: datatypeRoleOf
  some values from: OntoDT: primitive datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: choice (primitive,void) datatype
type: Class
subclass of: OntoDT: choice datatype
subclass of: Restriction
  on property: OntoDT: hasAlternativeComponent
subclass of: Restriction
  on property: OntoDT: hasAlternativeComponent
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: void alternative component
type: Class
subclass of: OntoDT: alternative component
subclass of: Restriction
  on property: OntoDT: datatypeRoleOf
  some values from: OntoDT: void datatype
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: descriptive record of primitives with missing values field component
type: Class
subclass of: Restriction
  on property: OntoDT: datatypeRoleOf
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: choice(primitive,void) field component
type: Class
subclass of: Restriction
  on property: OntoDT: datatypeRoleOf
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: unlabeled data
type: Class
equivalent class: Class
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: descriptive data with missing values field component
type: Class
subclass of: OntoDT: aggregate field component
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: unlabeled data without missing values
type: Class
subclass of: Restriction
  on property: OntoDT: hasFieldComponent
  some values from: OntoDT: descriptive data without missing values component
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: record of choice(primitive,void)
type: Class
subclass of: OntoDT: record datatype
subclass of: Restriction
  on property: OntoDT: hasFieldComponent
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: choice field component
type: Class
subclass of: OntoDT: field component
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: feature-based unlabeled data with missing values
type: Class
subclass of: Restriction
  on property: OntoDT: hasFieldComponent
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OntoDT: feature-based unlabeled data without missing values
type: Class
subclass of: Restriction
  on property: OntoDT: hasFieldComponent
  some values from: OntoDT: descriptive record of primitives without missing values field component

OntoDT: record with one component
type: Class
equivalent class: Class
  intersection of: OntoDT: record datatype
  intersection of: Restriction
    on property: OntoDT: hasFieldComponent
    qualified cardinality: 1
    on class: OntoDT: field component
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

Geriatric Depression Scale Assessment design
type: Class
subclass of: assay design

biomarker assessment
type: Class
subclass of: OGMS_0000108
subclass of: Restriction
  on property: BFO_0000055
  some values from: Restriction
    on property: RO_0000059
    some values from: biomarker assessment design
subclass of: Restriction
  on property: RO_0000057
  some values from: study participant
subclass of: Restriction
  on property: hasAgent
  some values from: doctor
subclass of: Restriction
  on property: hasInput
  some values from: biospecimen collection data
subclass of: Restriction
  on property: hasOutput
  some values from: biomarker data
subclass of: Restriction
  on property: isPreceededBy
  some values from: biospecimen collection

clinical assessment
type: Class
subclass of: OGMS_0000108
subclass of: Restriction
  on property: RO_0000057
  some values from: study participant
subclass of: Restriction
  on property: hasAgent
  some values from: doctor

imaging assessment
type: Class
subclass of: OGMS_0000108
subclass of: Restriction
  on property: BFO_0000055
  some values from: image provider role
subclass of: Restriction
  on property: RO_0000057
  some values from: study subject
subclass of: Restriction
  on property: hasAgent
  some values from: doctor
subclass of: Restriction
  on property: hasOutput
  some values from: IAO_0000101

biospecimen collection
type: Class
subclass of: OGMS_0000108
subclass of: Restriction
  on property: BFO_0000055
  some values from: Restriction
    on property: RO_0000059
    some values from: biospecimen collection design
subclass of: Restriction
  on property: RO_0000057
  some values from: study participant
subclass of: Restriction
  on property: hasAgent
  some values from: doctor
subclass of: Restriction
  on property: hasOutput
  some values from: biospecimen collection data

blood sampling
type: Class
subclass of: biospecimen collection
subclass of: Restriction
  on property: BFO_0000050
  some values from: visit
subclass of: Restriction
  on property: RO_0000057
  some values from: study participant
subclass of: Restriction
  on property: hasAgent
  some values from: doctor
subclass of: Restriction
  on property: hasOutput
  some values from: blood sample data

lumbar puncture sampling
type: Class
subclass of: biospecimen collection
subclass of: Restriction
  on property: BFO_0000050
  some values from: visit
subclass of: Restriction
  on property: RO_0000057
  some values from: study participant
subclass of: Restriction
  on property: hasAgent
  some values from: doctor
subclass of: Restriction
  on property: hasOutput
  some values from: lumbar puncture data

vital signs assessment
type: Class
subclass of: OGMS_0000057
subclass of: Restriction
  on property: BFO_0000055
  some values from: Restriction
    on property: RO_0000059
    some values from: vital signs assessment design
subclass of: Restriction
  on property: RO_0000057
  some values from: study participant
subclass of: Restriction
  on property: hasAgent
  some values from: doctor
subclass of: Restriction
  on property: hasOutput
  some values from: vital signs data

screening labs assessment
type: Class
subclass of: OGMS_0000056
subclass of: Restriction
  on property: BFO_0000055
  some values from: Restriction
    on property: RO_0000059
    some values from: screening labs assessment design
subclass of: Restriction
  on property: RO_0000057
  some values from: study participant
subclass of: Restriction
  on property: hasAgent
  some values from: doctor
subclass of: Restriction
  on property: hasOutput
  some values from: screening labs assessment

neurological assessment
type: Class
subclass of: OGMS_0000108
subclass of: Restriction
  on property: BFO_0000055
  some values from: Restriction
    on property: RO_0000059
    some values from: neurological assessment design
subclass of: Restriction
  on property: RO_0000057
  some values from: study participant
subclass of: Restriction
  on property: hasAgent
  some values from: doctor
subclass of: Restriction
  on property: hasOutput
  some values from: neurological examination data

clinical assessment of study partner
type: Class
subclass of: clinical assessment
subclass of: Restriction
  on property: RO_0000057
  some values from: NDDO_10000854
subclass of: Restriction
  on property: hasAgent
  some values from: doctor

clinical assessment of study subject
type: Class
subclass of: clinical assessment
subclass of: Restriction
  on property: RO_0000057
  some values from: study subject
subclass of: Restriction
  on property: hasAgent
  some values from: doctor

clinical assessment of study subject and partner
type: Class
subclass of: clinical assessment
subclass of: Restriction
  on property: RO_0000057
  some values from: study subject
subclass of: Restriction
  on property: RO_0000057
  some values from: NDDO_10000854
subclass of: Restriction
  on property: hasAgent
  some values from: doctor

telephone check assessment
type: Class
subclass of: BFO_0000015

visit
type: Class
subclass of: BFO_0000015
subclass of: Restriction
  on property: BFO_0000050
  some values from: OBI_0000471
subclass of: Restriction
  on property: RO_0000057
  some values from: study participant
subclass of: Restriction
  on property: hasInformation
  some values from: visit specification
subclass of: Restriction
  on property: occuresAt
  some values from: BFO_0000029
subclass of: Restriction
  on property: hasDate
  some values from: dateTime

diagnostic data
type: Class
subclass of: IAO_0000109

MRI image
type: Class
subclass of: IAO_0000101

clinical data
type: Class
subclass of: diagnostic data
subclass of: Restriction
  on property: expressedIn
  some values from: assessment scale
subclass of: Restriction
  on property: isOutputOf
  some values from: clinical assessment

biomarker data
type: Class
subclass of: IAO_0000109
subclass of: Restriction
  on property: isOutputOf
  some values from: biomarker assessment

PET image
type: Class
subclass of: IAO_0000101

personal and social history data
type: Class
subclass of: IAO_0000109

protocol data
type: Class
subclass of: IAO_0000109

image data score
type: Class
subclass of: diagnostic data
subclass of: Restriction
  on property: extractedFrom
  some values from: IAO_0000101

biospecimen collection data
type: Class
subclass of: IAO_0000109
subclass of: Restriction
  on property: isOutputOf
  some values from: biospecimen collection

Telephone visit
type: Class
subclass of: visit
subclass of: Restriction
  on property: BFO_0000051
  some values from: telephone check assessment

Physical visit
type: Class
subclass of: visit

clinical assessment questionnaire
type: Class
subclass of: IAO_0000310

Geriatric Depression Scale Assessment Questionnaire
type: Class
subclass of: clinical assessment questionnaire

Symbol Digit Modalities Test (SDMT)
type: Class
subclass of: cognitive assessment
subclass of: Restriction
  on property: BFO_0000055
  some values from: Restriction
    on property: RO_0000059
    some values from: Symbol Digit Modalities Test (SDMT) design
subclass of: Restriction
  on property: RO_0000057
  some values from: study subject
subclass of: Restriction
  on property: hasAgent
  some values from: doctor
subclass of: Restriction
  on property: hasInput
  some values from: Symbol Digit Modalities Assessment Questionnaire
subclass of: Restriction
  on property: hasOutput
  some values from: Symbol Digit Modalities Test Score

Montreal Cognitive Assessment (MoCA)
type: Class
subclass of: cognitive assessment
subclass of: Restriction
  on property: BFO_0000055
  some values from: Restriction
    on property: RO_0000059
    some values from: Montreal Cognitive Assessment (MoCA) design
subclass of: Restriction
  on property: RO_0000057
  some values from: study subject
subclass of: Restriction
  on property: hasAgent
  some values from: doctor
subclass of: Restriction
  on property: hasInput
  some values from: Montreal Cognitive Assessment Questionnaire
subclass of: Restriction
  on property: hasOutput
  some values from: Montreal Cognitive Assessment (MoCA) Score
NDDO_10000049: MoCA score

Semantic Fluency Assessment
type: Class
subclass of: cognitive assessment
subclass of: Restriction
  on property: BFO_0000055
  some values from: Restriction
    on property: RO_0000059
    some values from: Semantic Fluency Assessment design
subclass of: Restriction
  on property: RO_0000057
  some values from: study subject
subclass of: Restriction
  on property: hasAgent
  some values from: doctor
subclass of: Restriction
  on property: hasInput
  some values from: Semantic Fluency Assessment Questionnaire
subclass of: Restriction
  on property: hasOutput
  some values from: Semantic Fluency Assessment Score

Geriatric Depression Scale Assessment
type: Class
subclass of: clinical assessment of study subject
subclass of: Restriction
  on property: BFO_0000055
  some values from: Restriction
    on property: RO_0000059
    some values from: Geriatric Depression Scale Assessment design
subclass of: Restriction
  on property: RO_0000057
  some values from: study subject
subclass of: Restriction
  on property: hasAgent
  some values from: doctor
subclass of: Restriction
  on property: hasInput
  some values from: Geriatric Depression Scale Assessment Questionnaire
subclass of: Restriction
  on property: hasOutput
  some values from: Geriatric Depression (GDS-15) Score

cognitive assessment
type: Class
subclass of: clinical assessment of study subject
subclass of: Restriction
  on property: RO_0000057
  some values from: study subject
subclass of: Restriction
  on property: hasAgent
  some values from: doctor

Magnetic Resonance Imaging (MRI)
type: Class
subclass of: imaging assessment
subclass of: Restriction
  on property: BFO_0000055
  some values from: Restriction
    on property: RO_0000059
    some values from: Magnetic Resonance Imaging (MRI) design
subclass of: Restriction
  on property: hasAgent
  some values from: doctor
subclass of: Restriction
  on property: hasOutput
  some values from: MRI image
NDDO_10000057: http://purl.bioontology.org/ontology/SNOMEDCT/113091000
NDDO_10000081: Magnetic resonance study MR - Magnetic resonance MRI MRI - Magnetic resonance imaging Magnetic resonance imaging (procedure) NMR - Nuclear magnetic resonance

Positron Emission Tomography (PET)
type: Class
subclass of: imaging assessment
subclass of: Restriction
  on property: BFO_0000055
  some values from: Restriction
    on property: RO_0000059
    some values from: Positron Emission Tomography (PET) design
subclass of: Restriction
  on property: hasAgent
  some values from: doctor
subclass of: Restriction
  on property: hasOutput
  some values from: PET image
NDDO_10000057: http://purl.bioontology.org/ontology/SNOMEDCT/82918005
NDDO_10000081: PET scan PET - Positron emission tomography Positron emission tomography (procedure)

demographic assessment
type: Class
subclass of: OGMS_0000108
subclass of: Restriction
  on property: BFO_0000055
  some values from: Restriction
    on property: RO_0000059
    some values from: demographic assessment design
subclass of: Restriction
  on property: RO_0000057
  some values from: study participant
subclass of: Restriction
  on property: hasAgent
  some values from: doctor

education assessment
type: Class
subclass of: OGMS_0000108
subclass of: Restriction
  on property: BFO_0000055
  some values from: Restriction
    on property: RO_0000059
    some values from: education assessment design
subclass of: Restriction
  on property: RO_0000057
  some values from: study participant
subclass of: Restriction
  on property: hasAgent
  some values from: doctor

personal history assessment
type: Class
subclass of: OGMS_0000108
subclass of: Restriction
  on property: BFO_0000055
  some values from: Restriction
    on property: RO_0000059
    some values from: personal history assessment design
subclass of: Restriction
  on property: RO_0000057
  some values from: study participant
subclass of: Restriction
  on property: hasAgent
  some values from: doctor

adverse events assessment
type: Class
subclass of: OGMS_0000108
subclass of: Restriction
  on property: BFO_0000055
  some values from: Restriction
    on property: RO_0000059
    some values from: adverse events assessment design
subclass of: Restriction
  on property: RO_0000057
  some values from: study participant
subclass of: Restriction
  on property: hasAgent
  some values from: doctor
subclass of: Restriction
  on property: hasOutput
  some values from: adverse events data

adverse events data
type: Class
subclass of: IAO_0000109
subclass of: Restriction
  on property: isOutputOf
  some values from: adverse events assessment

neurological examination data
type: Class
subclass of: IAO_0000109
subclass of: Restriction
  on property: isOutputOf
  some values from: neurological assessment

cognitive assessment data
type: Class
subclass of: clinical data
subclass of: Restriction
  on property: expressedIn
  some values from: assessment scale
subclass of: Restriction
  on property: isOutputOf
  some values from: cognitive assessment

blood sample data
type: Class
subclass of: biospecimen collection data

lumbar puncture data
type: Class
subclass of: biospecimen collection data
subclass of: Restriction
  on property: isOutputOf
  some values from: lumbar puncture sampling

DNA data
type: Class
subclass of: biomarker data
subclass of: Restriction
  on property: hasDatatype
  some values from: OntoDT: sequence datatype

study subject
type: Class
subclass of: study participant
subclass of: Restriction
  on property: NDDO_10000223
  some values from: NDDO_10000854

study participant
type: Class
subclass of: BFO_0000023
subclass of: Restriction
  on property: BFO_0000050
  some values from: cohort
subclass of: Restriction
  on property: roleOf
  some values from: person
subclass of: Restriction
  on property: hasID
  some values from: participant ID

MRI image data score
type: Class
subclass of: image data score
subclass of: Restriction
  on property: extractedFrom
  some values from: MRI image

PET image data score
type: Class
subclass of: image data score
subclass of: Restriction
  on property: extractedFrom
  some values from: Positron Emission Tomography (PET)

medical device
type: Class
subclass of: BFO_0000040

medical image device
type: Class
subclass of: medical device

MRI scanner
type: Class
subclass of: medical image device

PET scanner
type: Class
subclass of: medical image device

image provider role
type: Class
subclass of: BFO_0000023
subclass of: Restriction
  on property: roleOf
  some values from: medical image device

Semantic Fluency Assessment Score
type: Class
subclass of: cognitive assessment data
subclass of: Restriction
  on property: expressedIn
  some values from: Semantic Fluency Assessment Scale
subclass of: Restriction
  on property: hasDatatype
  some values from: Semantic Fluency Datatype
subclass of: Restriction
  on property: isOutputOf
  some values from: Semantic Fluency Assessment
subclass of: Restriction
  on property: hasValue
  some values from: Datatype
    on datatype: int
    with restrictions:
      min inclusive: 0
    with restrictions:
      max inclusive: 4
subclass of: Restriction
  on property: hasValue
  all values from: Datatype
    on datatype: int
    with restrictions:
      min inclusive: 0
    with restrictions:
      max inclusive: 4

Montreal Cognitive Assessment (MoCA) Score
type: Class
subclass of: cognitive assessment data
subclass of: Restriction
  on property: expressedIn
  some values from: Montreal Cognitive Assessment scale (MoCA scale)
subclass of: Restriction
  on property: hasDatatype
  some values from: Montreal Cognitive Assessment Datatype (MoCA Datatype)
subclass of: Restriction
  on property: isOutputOf
  some values from: Montreal Cognitive Assessment (MoCA)

Symbol Digit Modalities Test Score
type: Class
subclass of: cognitive assessment data
subclass of: Restriction
  on property: expressedIn
  some values from: Symbol Digit Modalities Test Scale
subclass of: Restriction
  on property: hasDatatype
  some values from: Symbol Digit Modalities Datatype
subclass of: Restriction
  on property: isOutputOf
  some values from: Symbol Digit Modalities Test (SDMT)
subclass of: Restriction
  on property: hasValue
  some values from: Datatype
    on datatype: int
    with restrictions:
      min inclusive: 0
    with restrictions:
      max inclusive: 93
subclass of: Restriction
  on property: hasValue
  all values from: Datatype
    on datatype: int
    with restrictions:
      min inclusive: 0
    with restrictions:
      max inclusive: 93

Geriatric Depression (GDS-15) Score
type: Class
subclass of: NDDO_10001963
subclass of: Restriction
  on property: expressedIn
  some values from: Geriatric Depression Scale (GDS-15)
subclass of: Restriction
  on property: hasDatatype
  some values from: Geriatric Depression Scale (GDS-15) Datatype
subclass of: Restriction
  on property: isOutputOf
  some values from: Geriatric Depression Scale Assessment

Geriatric Depression Scale (GDS-15)
type: Class
subclass of: assessment scale
NDDO_10000057: http://purl.bioontology.org/ontology/SNOMEDCT/273481004
NDDO_10000081: Geriatric depression scale (assessment scale) GDS - Geriatric depression scale
see also: SNOMED CT

Geriatric Depression Scale (GDS-15) Datatype
type: Class
subclass of: OntoDT: positive integer
subclass of: Restriction
  on property: IAO_0000136
  some values from: Geriatric Depression (GDS-15) Score
subclass of: Restriction
  on property: expressedIn
  some values from: Geriatric Depression Scale (GDS-15)
subclass of: Restriction
  on property: hasValue
  some values from: Datatype
    on datatype: double
    with restrictions:
      min inclusive: 0.0
    with restrictions:
      max inclusive: 15.0
subclass of: Restriction
  on property: hasValue
  all values from: Datatype
    on datatype: double
    with restrictions:
      min inclusive: 0.0
    with restrictions:
      max inclusive: 15.0

Montreal Cognitive Assessment scale (MoCA scale)
type: Class
subclass of: assessment scale
NDDO_10000057: http://purl.bioontology.org/ontology/SNOMEDCT/443597000
NDDO_10000081: Model of creative ability assessment scale
see also: SNOMED CT

Montreal Cognitive Assessment Datatype (MoCA Datatype)
type: Class
subclass of: OntoDT: positive integer
subclass of: Restriction
  on property: IAO_0000136
  some values from: Montreal Cognitive Assessment (MoCA) Score
subclass of: Restriction
  on property: expressedIn
  some values from: Montreal Cognitive Assessment scale (MoCA scale)

Symbol Digit Modalities Test Scale
type: Class
subclass of: assessment scale
is defined by: The scale for digit symbol substitution assessment has positive integer values that range from 0 to 93.

Symbol Digit Modalities Datatype
type: Class
subclass of: OntoDT: positive integer

Semantic Fluency Assessment Scale
type: Class
subclass of: assessment scale

Semantic Fluency Datatype
type: Class
subclass of: OntoDT: positive integer
subclass of: Class
  intersection of: OntoDT: positive integer
  intersection of: Restriction
    on property: IAO_0000136
    some values from: Semantic Fluency Assessment Score
  intersection of: Restriction
    on property: expressedIn
    some values from: Semantic Fluency Assessment Scale
  intersection of: Restriction
    on property: hasValue
    some values from: Datatype
      on datatype: double
      with restrictions:
        min inclusive: 0.0
      with restrictions:
        max inclusive: 4.0
  intersection of: Restriction
    on property: hasValue
    all values from: Datatype
      on datatype: double
      with restrictions:
        min inclusive: 0.0
      with restrictions:
        max inclusive: 4.0

participant ID
type: Class
subclass of: OntoDT: identifier
subclass of: Restriction
  on property: hasDatatype
  some values from: NDDO_10000890

participant rooster ID
type: Class
subclass of: OntoDT: identifier
subclass of: Restriction
  on property: hasDatatype
  some values from: NDDO_10002147

site ID
type: Class
subclass of: OntoDT: identifier
subclass of: Restriction
  on property: hasDatatype
  some values from: NDDO_10002162

specification entity
type: Class
subclass of: IAO_0000030

assessment scale
type: Class
subclass of: specification entity

visit specification
type: Class
subclass of: IAO_0000104
subclass of: Restriction
  on property: BFO_0000051
  some values from: Visit Code
subclass of: Restriction
  on property: BFO_0000051
  some values from: study participant specification
subclass of: Restriction
  on property: BFO_0000051
  some values from: cohort specification
subclass of: Restriction
  on property: IAO_0000136
  some values from: visit
subclass of: Restriction
  on property: hasDate
  some values from: dateTime
subclass of: Restriction
  on property: hasDate
  all values from: dateTime

person
type: Class
subclass of: BFO_0000030
subclass of: Restriction
  on property: isOfGender
  some values from: sex data

cohort
type: Class
subclass of: BFO_0000027
subclass of: Restriction
  on property: BFO_0000051
  some values from: person

Montreal Cognitive Assessment Questionnaire
type: Class
subclass of: cognitive assessment questionnaire

Semantic Fluency Assessment Questionnaire
type: Class
subclass of: cognitive assessment questionnaire

Symbol Digit Modalities Assessment Questionnaire
type: Class
subclass of: cognitive assessment questionnaire

Visit Code
type: Class
subclass of: OntoDT: identifier
subclass of: Restriction
  on property: hasDatatype
  some values from: Visit Code Datatype

Visit Code Datatype
type: Class
subclass of: OntoDT: discrete datatype
subclass of: Restriction
  on property: IAO_0000136
  some values from: visit specification

cognitive assessment questionnaire
type: Class
subclass of: clinical assessment questionnaire

study participant specification
type: Class
subclass of: specification entity
subclass of: Restriction
  on property: BFO_0000051
  some values from: study participant occurence specification
subclass of: Restriction
  on property: IAO_0000136
  some values from: study participant

study participant occurence specification
type: Class
subclass of: specification entity

new study participant
type: Class
subclass of: study participant occurence specification

Age Datatype
type: Class
subclass of: OntoDT: real datatype

Marital Status Datatype
type: Class
subclass of: OntoDT: discrete datatype
subclass of: Restriction
  on property: IAO_0000136
  some values from: marital status data

Origin Protocol Datatype
type: Class
subclass of: OntoDT: discrete datatype
subclass of: Restriction
  on property: IAO_0000136
  some values from: NDDO_10004455

Race Datatype
type: Class
subclass of: OntoDT: discrete datatype
subclass of: Restriction
  on property: IAO_0000136
  some values from: race data

Sex Datatype
type: Class
subclass of: OntoDT: discrete datatype
subclass of: Restriction
  on property: IAO_0000136
  some values from: sex data

vital signs data
type: Class
subclass of: IAO_0000109
subclass of: Restriction
  on property: isOutputOf
  some values from: vital signs assessment

demographics data
type: Class
subclass of: personal and social history data
subclass of: Restriction
  on property: isOutputOf
  some values from: demographic assessment

age data
type: Class
subclass of: demographics data
subclass of: Restriction
  on property: hasDatatype
  some values from: Age Datatype

ethnicity data
type: Class
subclass of: demographics data

race data
type: Class
subclass of: demographics data

sex data
type: Class
subclass of: demographics data
subclass of: Restriction
  on property: hasDatatype
  some values from: Sex Datatype

education data
type: Class
subclass of: personal and social history data
subclass of: Restriction
  on property: hasDatatype
  some values from: NDDO_10002075
subclass of: Restriction
  on property: isOutputOf
  some values from: education assessment

personal history data
type: Class
subclass of: personal and social history data
subclass of: Restriction
  on property: isOutputOf
  some values from: personal history assessment

marital status data
type: Class
subclass of: personal history data

cohort specification
type: Class
subclass of: specification entity
subclass of: Restriction
  on property: BFO_0000051
  some values from: study specification
subclass of: Restriction
  on property: IAO_0000136
  some values from: cohort

doctor
type: Class
subclass of: BFO_0000023
subclass of: Restriction
  on property: roleOf
  some values from: person

PPMI cohort
type: Class
subclass of: cohort specification

Magnetic Resonance Imaging (MRI) design
type: Class
subclass of: assay design

Positron Emission Tomography (PET) design
type: Class
subclass of: assay design

Semantic Fluency Assessment design
type: Class
subclass of: assay design

adverse events assessment design
type: Class
subclass of: assay design

biomarker assessment design
type: Class
subclass of: assay design

biospecimen collection design
type: Class
subclass of: assay design

clinical history taking design
type: Class
subclass of: assay design

demographic assessment design
type: Class
subclass of: assay design

education assessment design
type: Class
subclass of: assay design

neurological assessment design
type: Class
subclass of: assay design

personal history assessment design
type: Class
subclass of: assay design

screening labs assessment design
type: Class
subclass of: assay design

vital signs assessment design
type: Class
subclass of: assay design

Montreal Cognitive Assessment (MoCA) design
type: Class
subclass of: assay design

Symbol Digit Modalities Test (SDMT) design
type: Class
subclass of: assay design

OntoDT: identifier
type: Class
subclass of: IAO_0000030
IAO_0000114: IAO_0000228
IAO_0000412: OntoDT

OBI: data representational model
type: Class
subclass of: IAO_0000033
IAO_0000114: IAO_0000228
IAO_0000412: Ontology of Biomedical Investigations