B5Y7W0
type: Protein
reviewed: true
created: 2009-03-24
modified: 2023-02-22
version: 72
mnemonic: ACKA_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPAAE372CE1430EF04
alternative name: SIPD447CFC221064F4E
enzyme: http://purl.uniprot.org/enzyme/2.7.2.1
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPCB63AA4ECC240870
annotation: SIP61177F38B162F60D
annotation: SIP781D4B208F458339
annotation: SIP7523DD828E4AC81F
annotation: SIPF915C49310A4FD8E
annotation: SIPD074C65EF9C65765
annotation: SIP3489EBC41531506C
annotation: PRO_1000089970
annotation: SIP9B35DD4CE85A15FE
annotation: SIPCF6257333F42C88E
annotation: SIP3FB3E5104F487469
annotation: SIP68A1094BF5C26204
annotation: SIP233A861889886C3B
annotation: SIP0374574494BC490D
annotation: SIP716DEA8991AABD5A
annotation: SIPE6071D26332F8426
annotation: SIP45E00D4E39710112
annotation: SIP5F9C009D7D4E43F9
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/418
classified with: http://purl.uniprot.org/keywords/460
classified with: http://purl.uniprot.org/keywords/479
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005737
classified with: GO_0008776
classified with: GO_0005524
classified with: GO_0000287
classified with: GO_0006085
classified with: GO_0006082
classified with: GO_0016310
sequence: B5Y7W0-1
proteome: Chromosome

SIP37D9E8E91EBB1099
type: Submission Citation
title: The complete genome sequence of Coprothermobacter proteolyticus strain ATCC 5245 / DSM 5265 / BT.
author: Dodson R.J.
author: Durkin A.S.
author: Wu M.
author: Eisen J.
author: Sutton G.
date: 2008-08
submitted to: EMBL/GenBank/DDBJ

B5Y7W0-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0282
type: Resource
database: eggNOG
comment: Bacteria

MF_00020
type: Resource
database: HAMAP
comment: Acetate_kinase
signature sequence match: HAMAP MF 00020 match 1

IPR004372
type: Resource
database: InterPro
comment: Ac/propionate_kinase

IPR000890
type: Resource
database: InterPro
comment: Aliphatic_acid_kin_short-chain

IPR023865
type: Resource
database: InterPro
comment: Aliphatic_acid_kinase_CS

IPR043129
type: Resource
database: InterPro
comment: ATPase_NBD

PTHR21060
type: Resource
database: PANTHER
comment: ACETATE KINASE
signature sequence match: PANTHER PTHR21060 match 1

PTHR21060:SF15
type: Resource
database: PANTHER
comment: ACETATE KINASE
signature sequence match: PANTHER PTHR21060:SF15 match 1

PF00871
type: Resource
database: Pfam
comment: Acetate_kinase
signature sequence match: Pfam PF00871 match 1

PIRSF000722
type: Resource
database: PIRSF
comment: Acetate_prop_kin
signature sequence match: PIRSF PIRSF000722 match 1

PR00471
type: Resource
database: PRINTS
comment: ACETATEKNASE

SSF53067
type: Resource
database: SUPFAM
comment: Actin-like ATPase domain
signature sequence match: SUPFAM SSF53067 match 1
signature sequence match: SUPFAM SSF53067 match 2

TIGR00016
type: Resource
database: TIGRFAMs
comment: ackA
signature sequence match: TIGRFAMs TIGR00016 match 1

PS01075
type: Resource
database: PROSITE
comment: ACETATE_KINASE_1
signature sequence match: PROSITE PS01075 match 1

PS01076
type: Resource
database: PROSITE
comment: ACETATE_KINASE_2
signature sequence match: PROSITE PS01076 match 1

SIPAAE372CE1430EF04
type: Structured Name
full name: Acetate kinase
ec name: 2.7.2.1

SIPD447CFC221064F4E
type: Structured Name
full name: Acetokinase

ackA
type: Gene
locus name: COPRO5265_0498

SIPCB63AA4ECC240870
type: Function Annotation
comment: Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction.

SIP781D4B208F458339
type: Cofactor Annotation
comment: Mg(2+). Can also accept Mn(2+).
cofactor: CHEBI_18420
cofactor: CHEBI_29035

SIPF915C49310A4FD8E
type: Subunit Annotation
comment: Homodimer.

SIP3489EBC41531506C
type: Similarity Annotation
comment: Belongs to the acetokinase family.

PRO_1000089970
type: Chain Annotation
comment: Acetate kinase
mass: 44202
range: 18636005759725614tt1tt400

18636005759725614tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y7W0-1

18636005759725614tt400
type: Position
type: ExactPosition
position: 400
reference: B5Y7W0-1

SIP9B35DD4CE85A15FE
type: Active Site Annotation
comment: Proton donor/acceptor
range: 18636005759725614tt148tt148

18636005759725614tt148
type: Position
type: ExactPosition
position: 148
reference: B5Y7W0-1

18636005759725614tt7
type: Position
type: ExactPosition
position: 7
reference: B5Y7W0-1

18636005759725614tt14
type: Position
type: ExactPosition
position: 14
reference: B5Y7W0-1

18636005759725614tt91
type: Position
type: ExactPosition
position: 91
reference: B5Y7W0-1

18636005759725614tt208
type: Position
type: ExactPosition
position: 208
reference: B5Y7W0-1

18636005759725614tt212
type: Position
type: ExactPosition
position: 212
reference: B5Y7W0-1

18636005759725614tt284
type: Position
type: ExactPosition
position: 284
reference: B5Y7W0-1

18636005759725614tt286
type: Position
type: ExactPosition
position: 286
reference: B5Y7W0-1

18636005759725614tt332
type: Position
type: ExactPosition
position: 332
reference: B5Y7W0-1

18636005759725614tt336
type: Position
type: ExactPosition
position: 336
reference: B5Y7W0-1

18636005759725614tt384
type: Position
type: ExactPosition
position: 384
reference: B5Y7W0-1

SIP45E00D4E39710112
type: Site Annotation
comment: Transition state stabilizer
range: 18636005759725614tt180tt180

18636005759725614tt180
type: Position
type: ExactPosition
position: 180
reference: B5Y7W0-1

SIP5F9C009D7D4E43F9
type: Site Annotation
comment: Transition state stabilizer
range: 18636005759725614tt241tt241

18636005759725614tt241
type: Position
type: ExactPosition
position: 241
reference: B5Y7W0-1

substrate

B5Y7W0-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 44202
value: MKILVLNAGSSSLKFQLFDMEDESVMAKGIVERIGLDKPFLSYSKGTDKIKFDKEEPINHKDALQWVLNTLTSHEYGVITTLQEIGAVGHRVVHGGEEFTGSVLITEEVIEALERNKNLAPLHNPPNLTGIYATKAVLPEVPMVGVFDTAFHATMPERAYLYALPIELYEKYKVRRYGFHGTSHRYVAMEAARRLGKTLSELRIISAHLGNGASVCAIQGGKSIDTSMGFTPLEGLVMGTRSGDLDPAIPIWMMRELGMSFDEVDNLLNKKSGVFGLVRGRSFDMRDIEDWMAAGDEEAKKAMEVYCYRLKKYIGGYAAVMGGVDVLIFTAGVGENSPIVREMVCEGLEFLGIKLDKEKNNSRGDAIISAADSKVVVMSIKTNEELMIARDTYEIVRGLT

http://purl.uniprot.org/uniprot/B5Y7W0#attribution-C3905A3486D52CE377B6B85D4BC287B0
manual: true
evidence: ECO_0000255
source: MF_00020

B5Y8E2
type: Protein
reviewed: true
created: 2009-03-24
modified: 2023-05-03
version: 76
mnemonic: ACPS_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP2BEBC682D9C5D011
alternative name: SIP479C3A2215184A35
enzyme: http://purl.uniprot.org/enzyme/2.7.8.7
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPD17F34E0D064A3B8
annotation: SIPF8F14411CAE9CA09
annotation: SIP1E935E96DE17C07F
annotation: SIP617BF4A12126C7D4
annotation: SIP89932F0122C2939E
annotation: PRO_1000093871
annotation: SIPEF1E547F08BBF5C0
annotation: SIPEFA485F29A4A4104
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/275
classified with: http://purl.uniprot.org/keywords/460
classified with: http://purl.uniprot.org/keywords/479
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/808
classified with: GO_0005737
classified with: GO_0008897
classified with: GO_0000287
classified with: GO_0006633
sequence: MVIRGVGIDIVSMSRFEKVYAKHGQRFIAEFFAEEEQSMPLASLAARFAAKEAVKKALNTPSILFKNIVIGSPAREAKIVGQEIQGRVWVSISHEKDNAVAIAIWEAD
proteome: Chromosome

B5Y8E2-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0736
type: Resource
database: eggNOG
comment: Bacteria

http://purl.uniprot.org/gene3d/3.90.470.20
type: Resource
database: Gene3D
comment: 4'-phosphopantetheinyl transferase domain
signature sequence match: Gene3D 3.90.470.20 match 1

MF_00101
type: Resource
database: HAMAP
comment: AcpS
signature sequence match: HAMAP MF 00101 match 1

IPR008278
type: Resource
database: InterPro
comment: 4-PPantetheinyl_Trfase_dom

IPR037143
type: Resource
database: InterPro
comment: 4-PPantetheinyl_Trfase_dom_sf

IPR002582
type: Resource
database: InterPro
comment: ACPS

PF01648
type: Resource
database: Pfam
comment: ACPS
signature sequence match: Pfam PF01648 match 1

SSF56214
type: Resource
database: SUPFAM
comment: 4'-phosphopantetheinyl transferase
signature sequence match: SUPFAM SSF56214 match 1

SIP2BEBC682D9C5D011
type: Structured Name
full name: Holo-[acyl-carrier-protein] synthase
short name: Holo-ACP synthase
ec name: 2.7.8.7

SIP479C3A2215184A35
type: Structured Name
full name: 4'-phosphopantetheinyl transferase AcpS

acpS
type: Gene
locus name: COPRO5265_0691

SIPD17F34E0D064A3B8
type: Function Annotation
comment: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein.

SIP89932F0122C2939E
type: Similarity Annotation
comment: Belongs to the P-Pant transferase superfamily. AcpS family.

PRO_1000093871
type: Chain Annotation
comment: Holo-[acyl-carrier-protein] synthase
mass: 11929
range: 18636005775323694tt1tt108

18636005775323694tt1
type: Position
type: ExactPosition
position: 1
reference: MVIRGVGIDIVSMSRFEKVYAKHGQRFIAEFFAEEEQSMPLASLAARFAAKEAVKKALNTPSILFKNIVIGSPAREAKIVGQEIQGRVWVSISHEKDNAVAIAIWEAD

18636005775323694tt108
type: Position
type: ExactPosition
position: 108
reference: MVIRGVGIDIVSMSRFEKVYAKHGQRFIAEFFAEEEQSMPLASLAARFAAKEAVKKALNTPSILFKNIVIGSPAREAKIVGQEIQGRVWVSISHEKDNAVAIAIWEAD

18636005775323694tt9
type: Position
type: ExactPosition
position: 9
reference: MVIRGVGIDIVSMSRFEKVYAKHGQRFIAEFFAEEEQSMPLASLAARFAAKEAVKKALNTPSILFKNIVIGSPAREAKIVGQEIQGRVWVSISHEKDNAVAIAIWEAD

18636005775323694tt52
type: Position
type: ExactPosition
position: 52
reference: MVIRGVGIDIVSMSRFEKVYAKHGQRFIAEFFAEEEQSMPLASLAARFAAKEAVKKALNTPSILFKNIVIGSPAREAKIVGQEIQGRVWVSISHEKDNAVAIAIWEAD

MVIRGVGIDIVSMSRFEKVYAKHGQRFIAEFFAEEEQSMPLASLAARFAAKEAVKKALNTPSILFKNIVIGSPAREAKIVGQEIQGRVWVSISHEKDNAVAIAIWEAD
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 11929

http://purl.uniprot.org/uniprot/B5Y8E2#attribution-1F5F5386E209DFCC3422387253639116
manual: true
evidence: ECO_0000255
source: MF_00101

B5Y7W4
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 74
mnemonic: ACP_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPF018D8BE7E205B4F
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP7545CB24879BB5D8
annotation: SIPC0ECF3D31AD31BD1
annotation: SIP2731A19801C7D77A
annotation: SIP411E4360739393A6
annotation: SIPDCCDD5B0C1F35121
annotation: PRO_1000139014
annotation: SIPD4B6B0B0DA3DFDEB
annotation: SIP27D05E3575B18F74
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/275
classified with: http://purl.uniprot.org/keywords/596
classified with: http://purl.uniprot.org/keywords/597
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005737
classified with: GO_0000036
sequence: MEREKIFQELKNILKDTVTVEEEEITMESDLVNDLNLDSLDLVDLALSVEQVFGFEFSDEQLQQIKTVKDVVDIIESNLYTK
proteome: Chromosome

B5Y7W4-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0236
type: Resource
database: eggNOG
comment: Bacteria

http://purl.uniprot.org/gene3d/1.10.1200.10
type: Resource
database: Gene3D
comment: ACP-like
signature sequence match: Gene3D 1.10.1200.10 match 1

MF_01217
type: Resource
database: HAMAP
comment: Acyl_carrier
signature sequence match: HAMAP MF 01217 match 1

IPR036736
type: Resource
database: InterPro
comment: ACP-like_sf

IPR003231
type: Resource
database: InterPro
comment: Acyl_carrier

IPR009081
type: Resource
database: InterPro
comment: PP-bd_ACP

PTHR20863
type: Resource
database: PANTHER
comment: ACYL CARRIER PROTEIN
signature sequence match: PANTHER PTHR20863 match 1

PTHR20863:SF28
type: Resource
database: PANTHER
comment: ACYL CARRIER PROTEIN, MITOCHONDRIAL
signature sequence match: PANTHER PTHR20863:SF28 match 1

PF00550
type: Resource
database: Pfam
comment: PP-binding
signature sequence match: Pfam PF00550 match 1

SSF47336
type: Resource
database: SUPFAM
comment: ACP-like
signature sequence match: SUPFAM SSF47336 match 1

PS50075
type: Resource
database: PROSITE
comment: CARRIER
signature sequence match: PROSITE PS50075 match 1

SIPF018D8BE7E205B4F
type: Structured Name
full name: Acyl carrier protein
short name: ACP

acpP
type: Gene
locus name: COPRO5265_0502

SIP7545CB24879BB5D8
type: Function Annotation
comment: Carrier of the growing fatty acid chain in fatty acid biosynthesis.

SIP411E4360739393A6
type: PTM Annotation
comment: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.

SIPDCCDD5B0C1F35121
type: Similarity Annotation
comment: Belongs to the acyl carrier protein (ACP) family.

PRO_1000139014
type: Chain Annotation
comment: Acyl carrier protein
mass: 9525
range: 18636005759726638tt1tt82

18636005759726638tt1
type: Position
type: ExactPosition
position: 1
reference: MEREKIFQELKNILKDTVTVEEEEITMESDLVNDLNLDSLDLVDLALSVEQVFGFEFSDEQLQQIKTVKDVVDIIESNLYTK

18636005759726638tt82
type: Position
type: ExactPosition
position: 82
reference: MEREKIFQELKNILKDTVTVEEEEITMESDLVNDLNLDSLDLVDLALSVEQVFGFEFSDEQLQQIKTVKDVVDIIESNLYTK

SIPD4B6B0B0DA3DFDEB
type: Domain Extent Annotation
comment: Carrier
range: 18636005759726638tt4tt79

18636005759726638tt4
type: Position
type: ExactPosition
position: 4
reference: MEREKIFQELKNILKDTVTVEEEEITMESDLVNDLNLDSLDLVDLALSVEQVFGFEFSDEQLQQIKTVKDVVDIIESNLYTK

18636005759726638tt79
type: Position
type: ExactPosition
position: 79
reference: MEREKIFQELKNILKDTVTVEEEEITMESDLVNDLNLDSLDLVDLALSVEQVFGFEFSDEQLQQIKTVKDVVDIIESNLYTK

SIP27D05E3575B18F74
type: Modified Residue Annotation
comment: O-(pantetheine 4'-phosphoryl)serine
range: 18636005759726638tt39tt39

18636005759726638tt39
type: Position
type: ExactPosition
position: 39
reference: MEREKIFQELKNILKDTVTVEEEEITMESDLVNDLNLDSLDLVDLALSVEQVFGFEFSDEQLQQIKTVKDVVDIIESNLYTK

MEREKIFQELKNILKDTVTVEEEEITMESDLVNDLNLDSLDLVDLALSVEQVFGFEFSDEQLQQIKTVKDVVDIIESNLYTK
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 9525

http://purl.uniprot.org/uniprot/B5Y7W4#attribution-EBFCF1D44A6B78477DFBD33475E43FB0
manual: true
evidence: ECO_0000255
source: MF_01217

http://purl.uniprot.org/uniprot/B5Y7W4#attribution-D13C97E04C041CF3567C01508AE538D1
manual: true
evidence: ECO_0000255
source: PRU00258

B5Y9T8
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 77
mnemonic: ALR_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPA9A4E98D933D1F32
enzyme: http://purl.uniprot.org/enzyme/5.1.1.1
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPF02E80114E7B0BA6
annotation: SIPAF6E16C8E382D27E
annotation: SIPBDD4E07E6415214C
annotation: SIPCE9BCBAFE516B7E7
annotation: SIP0BD33991FB872049
annotation: PRO_1000138590
annotation: SIP9409F0BB41326F97
annotation: SIP46CC29B831CCD9EB
annotation: SIP50033F9BA04ABA62
annotation: SIP5BEF26DC6CB896C6
annotation: SIPA53DECCE20C7E6D2
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/413
classified with: http://purl.uniprot.org/keywords/663
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0008784
classified with: GO_0030170
classified with: GO_0030632
sequence: B5Y9T8-1
proteome: Chromosome

B5Y9T8-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0787
type: Resource
database: eggNOG
comment: Bacteria

cd00430
type: Resource
database: CDD
comment: PLPDE_III_AR
signature sequence match: CDD cd00430 match 1

http://purl.uniprot.org/gene3d/3.20.20.10
type: Resource
database: Gene3D
comment: Alanine racemase
signature sequence match: Gene3D 3.20.20.10 match 1

MF_01201
type: Resource
database: HAMAP
comment: Ala_racemase
signature sequence match: HAMAP MF 01201 match 1

IPR000821
type: Resource
database: InterPro
comment: Ala_racemase

IPR009006
type: Resource
database: InterPro
comment: Ala_racemase/Decarboxylase_C

IPR011079
type: Resource
database: InterPro
comment: Ala_racemase_C

IPR001608
type: Resource
database: InterPro
comment: Ala_racemase_N

IPR020622
type: Resource
database: InterPro
comment: Ala_racemase_pyridoxalP-BS

IPR029066
type: Resource
database: InterPro
comment: PLP-binding_barrel

PTHR30511
type: Resource
database: PANTHER
comment: ALANINE RACEMASE
signature sequence match: PANTHER PTHR30511 match 1

PTHR30511:SF0
type: Resource
database: PANTHER
comment: ALANINE RACEMASE, CATABOLIC-RELATED
signature sequence match: PANTHER PTHR30511:SF0 match 1

PF00842
type: Resource
database: Pfam
comment: Ala_racemase_C
signature sequence match: Pfam PF00842 match 1

PF01168
type: Resource
database: Pfam
comment: Ala_racemase_N
signature sequence match: Pfam PF01168 match 1

PR00992
type: Resource
database: PRINTS
comment: ALARACEMASE

SM01005
type: Resource
database: SMART
comment: Ala_racemase_C
signature sequence match: SMART SM01005 match 1

SSF50621
type: Resource
database: SUPFAM
comment: Alanine racemase C-terminal domain-like
signature sequence match: SUPFAM SSF50621 match 1

SSF51419
type: Resource
database: SUPFAM
comment: PLP-binding barrel
signature sequence match: SUPFAM SSF51419 match 1

TIGR00492
type: Resource
database: TIGRFAMs
comment: alr
signature sequence match: TIGRFAMs TIGR00492 match 1

PS00395
type: Resource
database: PROSITE
comment: ALANINE_RACEMASE
signature sequence match: PROSITE PS00395 match 1

SIPA9A4E98D933D1F32
type: Structured Name
full name: Alanine racemase
ec name: 5.1.1.1

alr
type: Gene
locus name: COPRO5265_1229

SIPF02E80114E7B0BA6
type: Function Annotation
comment: Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.

SIP0BD33991FB872049
type: Similarity Annotation
comment: Belongs to the alanine racemase family.

PRO_1000138590
type: Chain Annotation
comment: Alanine racemase
mass: 38878
range: 18636005793085486tt1tt348

18636005793085486tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y9T8-1

18636005793085486tt348
type: Position
type: ExactPosition
position: 348
reference: B5Y9T8-1

SIP9409F0BB41326F97
type: Active Site Annotation
comment: Proton acceptor; specific for D-alanine
range: 18636005793085486tt34tt34

18636005793085486tt34
type: Position
type: ExactPosition
position: 34
reference: B5Y9T8-1

SIP46CC29B831CCD9EB
type: Active Site Annotation
comment: Proton acceptor; specific for L-alanine
range: 18636005793085486tt243tt243

18636005793085486tt243
type: Position
type: ExactPosition
position: 243
reference: B5Y9T8-1

18636005793085486tt127
type: Position
type: ExactPosition
position: 127
reference: B5Y9T8-1

18636005793085486tt291
type: Position
type: ExactPosition
position: 291
reference: B5Y9T8-1

SIPA53DECCE20C7E6D2
type: Modified Residue Annotation
comment: N6-(pyridoxal phosphate)lysine
range: 18636005793085486tt34tt34

substrate

B5Y9T8-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 38878
value: MWNKWAEVSRMNLKNNVELIRQKLPDLEPIAVVKDDAYGHDAAVVVPELLKNGITKFAVVYAKDALMLSEFGAEWILVLDDPPLSNMCSEYEKRGIRFCITDSKWLSDGLLELPIKFHLFVDVGMHREGVPWYETNTIREICKVVGNRLEGICSHLSNGLSDSQALATEEERFREVLSIAPEGLMVHLSNSASLYNAKFPYATHFRPGISLYGYGYPGLKPVLSLKARVIHEHILEPGEGLSYGWTWRATEPTHVVTVPVGYGDGYNRKLSNKAIAGSKAGNLQQIGTVTMDFTMFEAPKNVTVGDEIVLMGEWEGGHFWADEMAQLVGTIPYEVLTSINPRVPRVLV

http://purl.uniprot.org/uniprot/B5Y9T8#attribution-35F80A75CD326B6A74A2E2D4A39D726C
manual: true
evidence: ECO_0000255
source: MF_01201

B5Y8Y0
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-05-03
version: 75
mnemonic: APT_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPC62527ADDBF300CB
enzyme: http://purl.uniprot.org/enzyme/2.4.2.7
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP5B441C58DFE12AB0
annotation: SIPFEF6DF501F6CFCB1
annotation: SIPE2D9C03E398BE5F9
annotation: SIPD0BE6E7F2ED2AFF4
annotation: SIPA75338C73580E063
annotation: SIPCFC836F52DD1C7FF
annotation: PRO_1000116168
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/328
classified with: http://purl.uniprot.org/keywords/660
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005737
classified with: GO_0003999
classified with: GO_0006168
classified with: GO_0044209
classified with: GO_0006166
sequence: MRVDDLRQYIRDIPNFPTEGVIFRDITPLLKNPDAFATTVDLMAEAVSSLNVTAVAAVEARGFIWGGTLAYRLGVGFIPIRKPGKLPFEVVEKEFELEYGKDVLQIHKDAAGPGDSILIVDDVLATGGTAQAAADLVNTLGADVAGFCFLLRLGTMDGYERLSKLGKKVFYLLTV
proteome: Chromosome

B5Y8Y0-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0503
type: Resource
database: eggNOG
comment: Bacteria

cd06223
type: Resource
database: CDD
comment: PRTases_typeI
signature sequence match: CDD cd06223 match 1

MF_00004
type: Resource
database: HAMAP
comment: Aden_phosphoribosyltr
signature sequence match: HAMAP MF 00004 match 1

IPR005764
type: Resource
database: InterPro
comment: Ade_phspho_trans

IPR000836
type: Resource
database: InterPro
comment: PRibTrfase_dom

IPR029057
type: Resource
database: InterPro
comment: PRTase-like

PTHR32315
type: Resource
database: PANTHER
comment: ADENINE PHOSPHORIBOSYLTRANSFERASE
signature sequence match: PANTHER PTHR32315 match 1

PTHR32315:SF3
type: Resource
database: PANTHER
comment: ADENINE PHOSPHORIBOSYLTRANSFERASE
signature sequence match: PANTHER PTHR32315:SF3 match 1

PF00156
type: Resource
database: Pfam
comment: Pribosyltran
signature sequence match: Pfam PF00156 match 1

SSF53271
type: Resource
database: SUPFAM
comment: PRTase-like
signature sequence match: SUPFAM SSF53271 match 1

TIGR01090
type: Resource
database: TIGRFAMs
comment: apt
signature sequence match: TIGRFAMs TIGR01090 match 1

PS00103
type: Resource
database: PROSITE
comment: PUR_PYR_PR_TRANSFER
signature sequence match: PROSITE PS00103 match 1

SIPC62527ADDBF300CB
type: Structured Name
full name: Adenine phosphoribosyltransferase
short name: APRT
ec name: 2.4.2.7

apt
type: Gene
locus name: COPRO5265_0896

SIP5B441C58DFE12AB0
type: Function Annotation
comment: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

SIPD0BE6E7F2ED2AFF4
type: Subunit Annotation
comment: Homodimer.

SIPCFC836F52DD1C7FF
type: Similarity Annotation
comment: Belongs to the purine/pyrimidine phosphoribosyltransferase family.

PRO_1000116168
type: Chain Annotation
comment: Adenine phosphoribosyltransferase
mass: 18979
range: 18636005776633902tt1tt175

18636005776633902tt1
type: Position
type: ExactPosition
position: 1
reference: MRVDDLRQYIRDIPNFPTEGVIFRDITPLLKNPDAFATTVDLMAEAVSSLNVTAVAAVEARGFIWGGTLAYRLGVGFIPIRKPGKLPFEVVEKEFELEYGKDVLQIHKDAAGPGDSILIVDDVLATGGTAQAAADLVNTLGADVAGFCFLLRLGTMDGYERLSKLGKKVFYLLTV

18636005776633902tt175
type: Position
type: ExactPosition
position: 175
reference: MRVDDLRQYIRDIPNFPTEGVIFRDITPLLKNPDAFATTVDLMAEAVSSLNVTAVAAVEARGFIWGGTLAYRLGVGFIPIRKPGKLPFEVVEKEFELEYGKDVLQIHKDAAGPGDSILIVDDVLATGGTAQAAADLVNTLGADVAGFCFLLRLGTMDGYERLSKLGKKVFYLLTV

MRVDDLRQYIRDIPNFPTEGVIFRDITPLLKNPDAFATTVDLMAEAVSSLNVTAVAAVEARGFIWGGTLAYRLGVGFIPIRKPGKLPFEVVEKEFELEYGKDVLQIHKDAAGPGDSILIVDDVLATGGTAQAAADLVNTLGADVAGFCFLLRLGTMDGYERLSKLGKKVFYLLTV
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 18979

http://purl.uniprot.org/uniprot/B5Y8Y0#attribution-0F27B14A644DA8A39AD9BF322F5FDB4F
manual: true
evidence: ECO_0000255
source: MF_00004

B5Y831
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-05-03
version: 84
mnemonic: ATPB_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPCABF2B7C796C67AF
alternative name: SIP54BDE05048B44533
alternative name: SIPE5DC476874342920
enzyme: http://purl.uniprot.org/enzyme/7.1.2.2
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPD544391367C7F6CB
annotation: SIP28D78431C2FFBAD1
annotation: SIP36A034133A79F2D3
annotation: SIPDA5CC70CF5AAFA5E
annotation: SIP1BBBC7DF833BCEFA
annotation: PRO_1000143489
annotation: SIPF8A47187BB8D0978
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/1003
classified with: http://purl.uniprot.org/keywords/139
classified with: http://purl.uniprot.org/keywords/375
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/1278
classified with: GO_0005886
classified with: GO_0045261
classified with: GO_0005524
classified with: GO_0046933
classified with: GO_0046961
sequence: B5Y831-1
proteome: Chromosome

B5Y831-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0055
type: Resource
database: eggNOG
comment: Bacteria

cd18110
type: Resource
database: CDD
comment: ATP-synt_F1_beta_C
signature sequence match: CDD cd18110 match 1

cd01133
type: Resource
database: CDD
comment: F1-ATPase_beta_CD
signature sequence match: CDD cd01133 match 1

http://purl.uniprot.org/gene3d/3.40.50.300
type: Resource
database: Gene3D
comment: P-loop containing nucleotide triphosphate hydrolases
signature sequence match: Gene3D 3.40.50.300 match 1

MF_01347
type: Resource
database: HAMAP
comment: ATP_synth_beta_bact
signature sequence match: HAMAP MF 01347 match 1

IPR003593
type: Resource
database: InterPro
comment: AAA+_ATPase

IPR005722
type: Resource
database: InterPro
comment: ATP_synth_F1_bsu

IPR020003
type: Resource
database: InterPro
comment: ATPase_a/bsu_AS

IPR004100
type: Resource
database: InterPro
comment: ATPase_F1/V1/A1_a/bsu_N

IPR036121
type: Resource
database: InterPro
comment: ATPase_F1/V1/A1_a/bsu_N_sf

IPR000194
type: Resource
database: InterPro
comment: ATPase_F1/V1/A1_a/bsu_nucl-bd

IPR024034
type: Resource
database: InterPro
comment: ATPase_F1/V1_b/a_C

IPR027417
type: Resource
database: InterPro
comment: P-loop_NTPase

PTHR15184
type: Resource
database: PANTHER
comment: ATP SYNTHASE
signature sequence match: PANTHER PTHR15184 match 1

PTHR15184:SF71
type: Resource
database: PANTHER
comment: ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL
signature sequence match: PANTHER PTHR15184:SF71 match 1

PF00006
type: Resource
database: Pfam
comment: ATP-synt_ab
signature sequence match: Pfam PF00006 match 1

PF02874
type: Resource
database: Pfam
comment: ATP-synt_ab_N
signature sequence match: Pfam PF02874 match 1

SM00382
type: Resource
database: SMART
comment: AAA
signature sequence match: SMART SM00382 match 1

SSF47917
type: Resource
database: SUPFAM
comment: C-terminal domain of alpha and beta subunits of F1 ATP synthase
signature sequence match: SUPFAM SSF47917 match 1

SSF50615
type: Resource
database: SUPFAM
comment: N-terminal domain of alpha and beta subunits of F1 ATP synthase
signature sequence match: SUPFAM SSF50615 match 1

SSF52540
type: Resource
database: SUPFAM
comment: P-loop containing nucleoside triphosphate hydrolases
signature sequence match: SUPFAM SSF52540 match 1

TIGR01039
type: Resource
database: TIGRFAMs
comment: atpD
signature sequence match: TIGRFAMs TIGR01039 match 1

PS00152
type: Resource
database: PROSITE
comment: ATPASE_ALPHA_BETA
signature sequence match: PROSITE PS00152 match 1

SIPCABF2B7C796C67AF
type: Structured Name
full name: ATP synthase subunit beta
ec name: 7.1.2.2

SIP54BDE05048B44533
type: Structured Name
full name: ATP synthase F1 sector subunit beta

SIPE5DC476874342920
type: Structured Name
full name: F-ATPase subunit beta

atpD
type: Gene
locus name: COPRO5265_0573

SIPD544391367C7F6CB
type: Function Annotation
comment: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.

SIP36A034133A79F2D3
type: Subunit Annotation
comment: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a(1), b(2) and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF(1) is attached to CF(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.

SIP1BBBC7DF833BCEFA
type: Similarity Annotation
comment: Belongs to the ATPase alpha/beta chains family.

PRO_1000143489
type: Chain Annotation
comment: ATP synthase subunit beta
mass: 49052
range: 18636005774143790tt1tt451

18636005774143790tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y831-1

18636005774143790tt451
type: Position
type: ExactPosition
position: 451
reference: B5Y831-1

18636005774143790tt143
type: Position
type: ExactPosition
position: 143
reference: B5Y831-1

18636005774143790tt150
type: Position
type: ExactPosition
position: 150
reference: B5Y831-1

B5Y831-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 49052
value: MEGKVIGIHGPVLDLQFTDYTPFERELIKVRDILVECRALLGEGKVRTVALGPTEGIRRGDKATALGKPMTIKVGEQLIGRVLSGIGAPLDQKEEPEGEERSVFNVPPQVTAVLPVSTVLETGIKALDLLAPFPRGGKIGLFGGAGVGKTVLVMELIHNVAIKHRGYSVFAGVGERTREGQELWEEMRESGVMDHLVMIFGQMNEPPGVRAITPYAAATVAEYLRSQYGGEILLFMDNIFRYAQAGMEVSTLLGRMPSAMGYQPTLFSEVAQIEERINSLAEGAITSVQAVYVPADDITDPAPATIFGHLDSSVVLSRALTEVGIYPAVDPLQSSSKMLDPEVVGYNHVQVAGRVKEFLQRYEELKDIIALLGMEELSPEDREVVLRARKIQMFLSQPFFVAEAFSGAPGKYVPLERTVEGFKAIIDGKLDHVPESALYMIGDISEAGVDV

http://purl.uniprot.org/uniprot/B5Y831#attribution-43A9882434E9506AAFC23F741E3F28D4
manual: true
evidence: ECO_0000255
source: MF_01347

B5Y659
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-05-03
version: 75
mnemonic: AZOR_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP4E84D4F47ACBA92B
alternative name: SIPC801E89D36087299
alternative name: SIP04E0140DB2DA2C6F
alternative name: SIP22708DEBA7C601FB
enzyme: http://purl.uniprot.org/enzyme/1.6.5.-
enzyme: http://purl.uniprot.org/enzyme/1.7.1.17
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP56316772DC5EFD7B
annotation: SIP2E4596CCACC66041
annotation: SIPA50BDAE85199B47E
annotation: SIP7A65FBEB6A63F0F8
annotation: SIP9BC15A6396C416B4
annotation: SIPE4AB32F58CC2E57B
annotation: SIPA38CA43174C4D19E
annotation: PRO_1000138972
annotation: SIP5A5B4AC2DFEDB6A5
annotation: SIP4465D293223D2AD4
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/288
classified with: http://purl.uniprot.org/keywords/520
classified with: http://purl.uniprot.org/keywords/560
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0009055
classified with: GO_0010181
classified with: GO_0016652
classified with: GO_0016655
sequence: B5Y659-1
proteome: Chromosome

B5Y659-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG1182
type: Resource
database: eggNOG
comment: Bacteria

MF_01216
type: Resource
database: HAMAP
comment: Azoreductase_type1
signature sequence match: HAMAP MF 01216 match 1

IPR003680
type: Resource
database: InterPro
comment: Flavodoxin_fold

IPR029039
type: Resource
database: InterPro
comment: Flavoprotein-like_sf

IPR023048
type: Resource
database: InterPro
comment: NADH:quinone_OxRdtase_FMN_depd

PTHR43741
type: Resource
database: PANTHER
comment: FMN-DEPENDENT NADH-AZOREDUCTASE 1
signature sequence match: PANTHER PTHR43741 match 1

PTHR43741:SF7
type: Resource
database: PANTHER
comment: FMN-DEPENDENT NADH:QUINONE OXIDOREDUCTASE
signature sequence match: PANTHER PTHR43741:SF7 match 1

PF02525
type: Resource
database: Pfam
comment: Flavodoxin_2
signature sequence match: Pfam PF02525 match 1

SSF52218
type: Resource
database: SUPFAM
comment: Flavoproteins
signature sequence match: SUPFAM SSF52218 match 1

SIP4E84D4F47ACBA92B
type: Structured Name
full name: FMN-dependent NADH:quinone oxidoreductase
ec name: 1.6.5.-

SIPC801E89D36087299
type: Structured Name
full name: Azo-dye reductase

SIP04E0140DB2DA2C6F
type: Structured Name
full name: FMN-dependent NADH-azo compound oxidoreductase

SIP22708DEBA7C601FB
type: Structured Name
full name: FMN-dependent NADH-azoreductase
ec name: 1.7.1.17

azoR
type: Gene
locus name: COPRO5265_1481

SIP56316772DC5EFD7B
type: Function Annotation
comment: Quinone reductase that provides resistance to thiol-specific stress caused by electrophilic quinones.

SIP2E4596CCACC66041
type: Function Annotation
comment: Also exhibits azoreductase activity. Catalyzes the reductive cleavage of the azo bond in aromatic azo compounds to the corresponding amines.

SIP9BC15A6396C416B4
type: Cofactor Annotation
comment: Binds 1 FMN per subunit.
cofactor: CHEBI_58210

SIPE4AB32F58CC2E57B
type: Subunit Annotation
comment: Homodimer.

SIPA38CA43174C4D19E
type: Similarity Annotation
comment: Belongs to the azoreductase type 1 family.

PRO_1000138972
type: Chain Annotation
comment: FMN-dependent NADH:quinone oxidoreductase
mass: 23175
range: 18636005740722478tt1tt201

18636005740722478tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y659-1

18636005740722478tt201
type: Position
type: ExactPosition
position: 201
reference: B5Y659-1

18636005740722478tt92
type: Position
type: ExactPosition
position: 92
reference: B5Y659-1

18636005740722478tt95
type: Position
type: ExactPosition
position: 95
reference: B5Y659-1

18636005740722478tt136
type: Position
type: ExactPosition
position: 136
reference: B5Y659-1

18636005740722478tt139
type: Position
type: ExactPosition
position: 139
reference: B5Y659-1

B5Y659-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 23175
value: MAKVLYVKANPKNNEESRTFRISEHFINEYKKAHPEDEIIELDLYKENIHFLSKEEINTIMSKDKSNLKDHPVLKYTYQFAEADKYVIATPMWNLSIPAILKAYFDYITVTGITFKYTENGAVGLLKNKKAVVIMSTGGEYLTPPFDQWNFASTYVTTMFKFFGVEDVSLIAAQRLDIIGEDVEKRVSDAMKEAEQLAKQF

http://purl.uniprot.org/uniprot/B5Y659#attribution-CB48F53183FB2D05ACF2F2876DBAEBFA
manual: true
evidence: ECO_0000255
source: MF_01216

B5Y9Z4
type: Protein
reviewed: true
created: 2009-07-28
modified: 2023-05-03
version: 90
mnemonic: BIOF_COPPD
old mnemonic: BIKB_COPPD
citation: SIP37D9E8E91EBB1099
conflicting sequence: SIPDEE6F4E80F138F88
recommended name: SIPD7ADB99A00D2D6E0
alternative name: SIP6AA432A4A9DA7749
alternative name: SIPD3A475FA85257690
alternative name: SIP57EE89F3966BB2DD
enzyme: http://purl.uniprot.org/enzyme/2.3.1.47
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPF479ECA2B4EE0CAF
annotation: SIPF089D75D7587546E
annotation: SIPA05C548DF918871B
annotation: SIP76FF647719D303A4
annotation: SIP0F4B9ABB4AAFD43D
annotation: SIPB310E1D38D954A7D
annotation: SIP79C661FDEC349D42
annotation: PRO_0000380957
annotation: SIP86AA2B8CE22A0210
annotation: SIPB10FA93B524DC04C
annotation: SIPF4BAD5EFA78F1BCB
annotation: SIP895DDFA838D49D5C
annotation: SIPFE80EB5145A0437F
annotation: SIPED52C08DFA2C58E4
annotation: SIP9D5F2F7512AEA484
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/12
classified with: http://purl.uniprot.org/keywords/93
classified with: http://purl.uniprot.org/keywords/663
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0008710
classified with: GO_0008890
classified with: GO_0030170
classified with: GO_0009102
sequence: B5Y9Z4-1
proteome: Chromosome

B5Y9Z4-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

EMBL ACI18052.1
comment: Different initiation.

COG0156
type: Resource
database: eggNOG
comment: Bacteria

cd06454
type: Resource
database: CDD
comment: KBL_like
signature sequence match: CDD cd06454 match 1

http://purl.uniprot.org/gene3d/3.90.1150.10
type: Resource
database: Gene3D
comment: Aspartate Aminotransferase, domain 1
signature sequence match: Gene3D 3.90.1150.10 match 1

http://purl.uniprot.org/gene3d/3.40.640.10
type: Resource
database: Gene3D
comment: Type I PLP-dependent aspartate aminotransferase-like (Major domain)
signature sequence match: Gene3D 3.40.640.10 match 1

IPR001917
type: Resource
database: InterPro
comment: Aminotrans_II_pyridoxalP_BS

IPR004839
type: Resource
database: InterPro
comment: Aminotransferase_I/II

IPR010962
type: Resource
database: InterPro
comment: AONS_Archaea/Firmicutes

IPR004723
type: Resource
database: InterPro
comment: AONS_Archaea/Proteobacteria

IPR015424
type: Resource
database: InterPro
comment: PyrdxlP-dep_Trfase

IPR015421
type: Resource
database: InterPro
comment: PyrdxlP-dep_Trfase_major

IPR015422
type: Resource
database: InterPro
comment: PyrdxlP-dep_Trfase_small

PTHR13693
type: Resource
database: PANTHER
comment: CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE
signature sequence match: PANTHER PTHR13693 match 1

PTHR13693:SF3
type: Resource
database: PANTHER
comment: LD36009P
signature sequence match: PANTHER PTHR13693:SF3 match 1

PF00155
type: Resource
database: Pfam
comment: Aminotran_1_2
signature sequence match: Pfam PF00155 match 1

SSF53383
type: Resource
database: SUPFAM
comment: PLP-dependent transferases
signature sequence match: SUPFAM SSF53383 match 1

TIGR00858
type: Resource
database: TIGRFAMs
comment: bioF
signature sequence match: TIGRFAMs TIGR00858 match 1

TIGR01825
type: Resource
database: TIGRFAMs
comment: gly_Cac_T_rel
signature sequence match: TIGRFAMs TIGR01825 match 1

PS00599
type: Resource
database: PROSITE
comment: AA_TRANSFER_CLASS_2
signature sequence match: PROSITE PS00599 match 1

SIPD7ADB99A00D2D6E0
type: Structured Name
full name: 8-amino-7-oxononanoate synthase
short name: AONS
ec name: 2.3.1.47

SIP6AA432A4A9DA7749
type: Structured Name
full name: 7-keto-8-amino-pelargonic acid synthase
short name: 7-KAP synthase
short name: KAPA synthase

SIPD3A475FA85257690
type: Structured Name
full name: 8-amino-7-ketopelargonate synthase

SIP57EE89F3966BB2DD
type: Structured Name
full name: Alpha-oxoamine synthase

http://purl.uniprot.org/uniprot/B5Y9Z4#gene-MD5F4B19ACB9FBF9EDBD5E1C7225B7F47B5
type: Gene
locus name: COPRO5265_1289

SIPF479ECA2B4EE0CAF
type: Function Annotation
comment: Catalyzes the decarboxylative condensation of pimeloyl-[acyl-carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.

SIP0F4B9ABB4AAFD43D
type: Subunit Annotation
comment: Homodimer.

SIPB310E1D38D954A7D
type: Similarity Annotation
comment: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. BioF subfamily.

SIP79C661FDEC349D42
type: Erroneous Initiation Annotation
comment: Extended N-terminus.
conflicting sequence: SIPDEE6F4E80F138F88

PRO_0000380957
type: Chain Annotation
comment: 8-amino-7-oxononanoate synthase
mass: 43172
range: 18636005793477678tt1tt393

18636005793477678tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y9Z4-1

18636005793477678tt393
type: Position
type: ExactPosition
position: 393
reference: B5Y9Z4-1

18636005793477678tt107
type: Position
type: ExactPosition
position: 107
reference: B5Y9Z4-1

18636005793477678tt108
type: Position
type: ExactPosition
position: 108
reference: B5Y9Z4-1

18636005793477678tt132
type: Position
type: ExactPosition
position: 132
reference: B5Y9Z4-1

18636005793477678tt180
type: Position
type: ExactPosition
position: 180
reference: B5Y9Z4-1

18636005793477678tt205
type: Position
type: ExactPosition
position: 205
reference: B5Y9Z4-1

18636005793477678tt208
type: Position
type: ExactPosition
position: 208
reference: B5Y9Z4-1

18636005793477678tt236
type: Position
type: ExactPosition
position: 236
reference: B5Y9Z4-1

18636005793477678tt239
type: Position
type: ExactPosition
position: 239
reference: B5Y9Z4-1

18636005793477678tt353
type: Position
type: ExactPosition
position: 353
reference: B5Y9Z4-1

SIP9D5F2F7512AEA484
type: Modified Residue Annotation
comment: N6-(pyridoxal phosphate)lysine
range: 18636005793477678tt239tt239

substrate

B5Y9Z4-1
type: Simple Sequence
modified: 2009-07-28
version: 2
mass: 43172
value: MPVEEFERELNERREQGLYVTIRKIGSPQGAWIIVDGKKVLNLSSNNYLGFANHPRLKEAAKKGIDDYGAGPAAVRTIAGDQLPQEKLEEMLAEFKGAEAAVLYQSGFCANLGTIPALVGEGDAIFSDELNHASIIDGCRLSRAKIIRYPHLNVQTLEELLKQERQNYKKAMIITDGVFSMDGDIAPMDKLADLADKYQCILYVDDAHGEGVLGDSGRGIVDYFGLQGRVDVEIGTLSKAFGVVGGFAAGSKLLAELLKQKARPLLFSSAPTAADVYASMEAVRILQESDELVKKLWENANYFKEHMRKAGFDLGNSQTPITPVMIGDEITTQEFSKKLFERNVFAQAISYPTVPKGKARMRVMISATHSRDDLDFAVEQFTAVGKELGVIQS

http://purl.uniprot.org/uniprot/B5Y9Z4#attribution-68097C5C9D39FEEE8BE013645ACBBDD4
creator: UniProtKB
manual: true
evidence: ECO_0000250

http://purl.uniprot.org/uniprot/B5Y9Z4#attribution-609619A7DF3E53CE5E48EDEF8B8F9DD1
manual: true
evidence: ECO_0000250

http://purl.uniprot.org/uniprot/B5Y9Z4#attribution-080ED3982FEC43F7C43A0689717F3D20
manual: true
evidence: ECO_0000305

B5Y8N2
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 72
mnemonic: BUK_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPE9B2CEF89628ECCB
alternative name: SIP5676F702ADEDD3FB
enzyme: http://purl.uniprot.org/enzyme/2.7.2.7
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP0CBC084AAD206B1B
annotation: SIP535D36D8744120E3
annotation: SIP307A786E1D32002E
annotation: PRO_1000128904
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/418
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005737
classified with: GO_0005524
classified with: GO_0047761
classified with: GO_0016310
sequence: B5Y8N2-1
proteome: Chromosome

B5Y8N2-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG3426
type: Resource
database: eggNOG
comment: Bacteria

cd00012
type: Resource
database: CDD
comment: NBD_sugar-kinase_HSP70_actin
signature sequence match: CDD cd00012 match 1

MF_00542
type: Resource
database: HAMAP
comment: Butyrate_kinase
signature sequence match: HAMAP MF 00542 match 1

IPR011245
type: Resource
database: InterPro
comment: Butyrate_kin

PTHR21060:SF3
type: Resource
database: PANTHER
comment: BUTYRATE KINASE 2-RELATED
signature sequence match: PANTHER PTHR21060:SF3 match 1

PIRSF036458
type: Resource
database: PIRSF
comment: Butyrate_kin
signature sequence match: PIRSF PIRSF036458 match 1

TIGR02707
type: Resource
database: TIGRFAMs
comment: butyr_kinase
signature sequence match: TIGRFAMs TIGR02707 match 1

SIPE9B2CEF89628ECCB
type: Structured Name
full name: Probable butyrate kinase
short name: BK
ec name: 2.7.2.7

SIP5676F702ADEDD3FB
type: Structured Name
full name: Branched-chain carboxylic acid kinase

buk
type: Gene
locus name: COPRO5265_0782

SIP307A786E1D32002E
type: Similarity Annotation
comment: Belongs to the acetokinase family.

PRO_1000128904
type: Chain Annotation
comment: Probable butyrate kinase
mass: 38667
range: 18636005775913518tt1tt356

18636005775913518tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y8N2-1

18636005775913518tt356
type: Position
type: ExactPosition
position: 356
reference: B5Y8N2-1

B5Y8N2-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 38667
value: MGFQILTINPGSTSTKVAWFDDDKLVWKDSVEHDAVTLSQFPSIAAQFELRASEVEKAVEKHGSDLNTLDAVVGRGGLLRPISSGVYSVNETMLKELIDARYGEHASNLGAPIAHAIASKVGCPAFIVDPVVVDEMDDISRLSGWPELPRKSIFHALNQKAVARRVARDFFSVPYEQLNLIVAHLGGGISIGAHKKGRVVDVNNALGGEGPMSPERAGTLPIMKLADYLYEHKPDRKEFSKKLVGKGGWVAHLGTNSGKDLEERVKNGDEHAILILKATGYQISKWIAQMAVALAGEVDGIIITGGLAYIPELVDFIQERVLWIAPVFVVPGEDEMLALAEGALRVLRGQEEAKTY

http://purl.uniprot.org/uniprot/B5Y8N2#attribution-6BAF4FD68AD3BDC28B303E3A6F06B718
manual: true
evidence: ECO_0000255
source: MF_00542

B5Y893
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-05-03
version: 70
mnemonic: CH10_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPFDB43817E50FCF12
alternative name: SIP2774763869FB9103
alternative name: SIP5D535EA69F0EC691
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPB755FD9A62883CF4
annotation: SIP5A27682CE468121C
annotation: SIPB192394044D7EB08
annotation: SIP2AA8FA772CEBC03E
annotation: PRO_1000129644
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/143
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005737
classified with: GO_0005524
classified with: GO_0044183
sequence: MEIKPLGDRVLLKPMEEEEKTKSGIVIPDTAKEKPQKGKVLAVGTGRTLDNGTRVPLEVQVGDIVVFSKYAGTEVKVDGEEYLIVSERDILAVVGHEN
proteome: Chromosome

B5Y893-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0234
type: Resource
database: eggNOG
comment: Bacteria

cd00320
type: Resource
database: CDD
comment: cpn10
signature sequence match: CDD cd00320 match 1

http://purl.uniprot.org/gene3d/2.30.33.40
type: Resource
database: Gene3D
comment: GroES chaperonin
signature sequence match: Gene3D 2.30.33.40 match 1

MF_00580
type: Resource
database: HAMAP
comment: CH10
signature sequence match: HAMAP MF 00580 match 1

IPR020818
type: Resource
database: InterPro
comment: Chaperonin_GroES

IPR037124
type: Resource
database: InterPro
comment: Chaperonin_GroES_sf

IPR018369
type: Resource
database: InterPro
comment: Chaprnonin_Cpn10_CS

IPR011032
type: Resource
database: InterPro
comment: GroES-like_sf

PTHR10772:SF58
type: Resource
database: PANTHER
comment: 10 KDA CHAPERONIN
signature sequence match: PANTHER PTHR10772:SF58 match 1

PTHR10772
type: Resource
database: PANTHER
comment: 10 KDA HEAT SHOCK PROTEIN
signature sequence match: PANTHER PTHR10772 match 1

PF00166
type: Resource
database: Pfam
comment: Cpn10
signature sequence match: Pfam PF00166 match 1

PR00297
type: Resource
database: PRINTS
comment: CHAPERONIN10

SM00883
type: Resource
database: SMART
comment: Cpn10
signature sequence match: SMART SM00883 match 1

SSF50129
type: Resource
database: SUPFAM
comment: GroES-like
signature sequence match: SUPFAM SSF50129 match 1

PS00681
type: Resource
database: PROSITE
comment: CHAPERONINS_CPN10
signature sequence match: PROSITE PS00681 match 1

SIPFDB43817E50FCF12
type: Structured Name
full name: Co-chaperonin GroES

SIP2774763869FB9103
type: Structured Name
full name: 10 kDa chaperonin

SIP5D535EA69F0EC691
type: Structured Name
full name: Chaperonin-10
short name: Cpn10

groES
type: Gene
alternative label: groS
locus name: COPRO5265_0635

SIPB755FD9A62883CF4
type: Function Annotation
comment: Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel.

SIP5A27682CE468121C
type: Subunit Annotation
comment: Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.

SIP2AA8FA772CEBC03E
type: Similarity Annotation
comment: Belongs to the GroES chaperonin family.

PRO_1000129644
type: Chain Annotation
comment: Co-chaperonin GroES
mass: 10702
range: 18636005774537518tt1tt98

18636005774537518tt1
type: Position
type: ExactPosition
position: 1
reference: MEIKPLGDRVLLKPMEEEEKTKSGIVIPDTAKEKPQKGKVLAVGTGRTLDNGTRVPLEVQVGDIVVFSKYAGTEVKVDGEEYLIVSERDILAVVGHEN

18636005774537518tt98
type: Position
type: ExactPosition
position: 98
reference: MEIKPLGDRVLLKPMEEEEKTKSGIVIPDTAKEKPQKGKVLAVGTGRTLDNGTRVPLEVQVGDIVVFSKYAGTEVKVDGEEYLIVSERDILAVVGHEN

MEIKPLGDRVLLKPMEEEEKTKSGIVIPDTAKEKPQKGKVLAVGTGRTLDNGTRVPLEVQVGDIVVFSKYAGTEVKVDGEEYLIVSERDILAVVGHEN
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 10702

http://purl.uniprot.org/uniprot/B5Y893#attribution-BE67A4551C804FD86CAC41C18705626C
manual: true
evidence: ECO_0000255
source: MF_00580

B5Y894
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 71
mnemonic: CH60_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPF255B4347D4E348A
alternative name: SIPE5C33196A30979CA
alternative name: SIPE325E657B082D974
enzyme: http://purl.uniprot.org/enzyme/5.6.1.7
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP08D695892DCCC3F7
annotation: SIP3DF8EFA016729581
annotation: SIPFF9647EDB8E4F35E
annotation: SIP8F152CE6AF3A9B8C
annotation: SIPDEC07D2F8A046E61
annotation: PRO_1000129996
annotation: SIP65B5BD5D9ABEF769
annotation: SIPA368969EF5FF17F5
annotation: SIPBB01DABDFF63A353
annotation: SIPBA395DC42C5B5CED
annotation: SIPFD812108453A9A77
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/143
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/413
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005737
classified with: GO_0005524
classified with: GO_0140662
classified with: GO_0016853
classified with: GO_0051082
classified with: GO_0042026
sequence: B5Y894-1
proteome: Chromosome

B5Y894-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0459
type: Resource
database: eggNOG
comment: Bacteria

cd03344
type: Resource
database: CDD
comment: GroEL
signature sequence match: CDD cd03344 match 1

http://purl.uniprot.org/gene3d/3.50.7.10
type: Resource
database: Gene3D
comment: GroEL
signature sequence match: Gene3D 3.50.7.10 match 1

http://purl.uniprot.org/gene3d/1.10.560.10
type: Resource
database: Gene3D
comment: GroEL-like equatorial domain
signature sequence match: Gene3D 1.10.560.10 match 1

http://purl.uniprot.org/gene3d/3.30.260.10
type: Resource
database: Gene3D
comment: TCP-1-like chaperonin intermediate domain
signature sequence match: Gene3D 3.30.260.10 match 1

MF_00600
type: Resource
database: HAMAP
comment: CH60
signature sequence match: HAMAP MF 00600 match 1

IPR018370
type: Resource
database: InterPro
comment: Chaperonin_Cpn60_CS

IPR001844
type: Resource
database: InterPro
comment: Cpn60/GroEL

IPR002423
type: Resource
database: InterPro
comment: Cpn60/GroEL/TCP-1

IPR027409
type: Resource
database: InterPro
comment: GroEL-like_apical_dom_sf

IPR027413
type: Resource
database: InterPro
comment: GROEL-like_equatorial_sf

IPR027410
type: Resource
database: InterPro
comment: TCP-1-like_intermed_sf

PTHR45633
type: Resource
database: PANTHER
comment: 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL
signature sequence match: PANTHER PTHR45633 match 1

PTHR45633:SF3
type: Resource
database: PANTHER
comment: 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL
signature sequence match: PANTHER PTHR45633:SF3 match 1

PF00118
type: Resource
database: Pfam
comment: Cpn60_TCP1
signature sequence match: Pfam PF00118 match 1

PR00298
type: Resource
database: PRINTS
comment: CHAPERONIN60

SSF52029
type: Resource
database: SUPFAM
comment: GroEL apical domain-like
signature sequence match: SUPFAM SSF52029 match 1

SSF48592
type: Resource
database: SUPFAM
comment: GroEL equatorial domain-like
signature sequence match: SUPFAM SSF48592 match 1
signature sequence match: SUPFAM SSF48592 match 2

TIGR02348
type: Resource
database: TIGRFAMs
comment: GroEL
signature sequence match: TIGRFAMs TIGR02348 match 1

PS00296
type: Resource
database: PROSITE
comment: CHAPERONINS_CPN60
signature sequence match: PROSITE PS00296 match 1

SIPF255B4347D4E348A
type: Structured Name
full name: Chaperonin GroEL
ec name: 5.6.1.7

SIPE5C33196A30979CA
type: Structured Name
full name: 60 kDa chaperonin

SIPE325E657B082D974
type: Structured Name
full name: Chaperonin-60
short name: Cpn60

groEL
type: Gene
alternative label: groL
locus name: COPRO5265_0636

SIP08D695892DCCC3F7
type: Function Annotation
comment: Together with its co-chaperonin GroES, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.

SIPFF9647EDB8E4F35E
type: Subunit Annotation
comment: Forms a cylinder of 14 subunits composed of two heptameric rings stacked back-to-back. Interacts with the co-chaperonin GroES.

SIPDEC07D2F8A046E61
type: Similarity Annotation
comment: Belongs to the chaperonin (HSP60) family.

PRO_1000129996
type: Chain Annotation
comment: Chaperonin GroEL
mass: 57887
range: 18636005774537774tt1tt537

18636005774537774tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y894-1

18636005774537774tt537
type: Position
type: ExactPosition
position: 537
reference: B5Y894-1

18636005774537774tt30
type: Position
type: ExactPosition
position: 30
reference: B5Y894-1

18636005774537774tt33
type: Position
type: ExactPosition
position: 33
reference: B5Y894-1

18636005774537774tt87
type: Position
type: ExactPosition
position: 87
reference: B5Y894-1

18636005774537774tt91
type: Position
type: ExactPosition
position: 91
reference: B5Y894-1

18636005774537774tt414
type: Position
type: ExactPosition
position: 414
reference: B5Y894-1

18636005774537774tt477
type: Position
type: ExactPosition
position: 477
reference: B5Y894-1

18636005774537774tt479
type: Position
type: ExactPosition
position: 479
reference: B5Y894-1

18636005774537774tt493
type: Position
type: ExactPosition
position: 493
reference: B5Y894-1

B5Y894-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 57887
value: MAAKLIAFDEEARSKLLTGVLKLSKAVKATLGPKGRYVVLERKFGSPLITNDGVTIAKEIDLEDPYENLGAQLAKEVASKTNDVAGDGTTTATVLAEAMVREGMKNVTAGANPIALRRGIEKAVEAVTEEIKKLSRPVSGKRDITEVATISAKDQQIGSIIAEAMEKVGKDGVVTVEEGKSLGMELEFVEGMQFDRGYVSPYFVTDPERMETVLEDPLIVITDKKISNVQEFLPLLEKIVQYGRSFLLIADDVEGEALATLVVNKLRGTFNCVAVKAPGFGDRRKEMLQDIAIVTGGQVISEELGVSFESVTPDMFGHARSVKVDKESTTIVGGKGSSEEIEKRIAQIRKQLETTESEYEKEKLQERLAKLAGGVAVIKVGAATETEMKEKKHRVEDAVSATKAAMEEGIVAGGGVTLVKASTVLDKLPLENDELIGATIVKKALMEPARVIAENAGFAGEVVVEELKKREYPVGFDAVKGEYVDMFEAGIIDPTKVTRSALQNAASIAAMVLTTEALVVEKPEQEKAQPGMPPEEY

http://purl.uniprot.org/uniprot/B5Y894#attribution-2F1A0E67B478851653C1AADDD6958B54
manual: true
evidence: ECO_0000255
source: MF_00600

B5Y7V9
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 79
mnemonic: COAD_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPF6F66FCD23803F87
alternative name: SIPCEC148E019BD360F
alternative name: SIP35682BD6712EB9F8
enzyme: http://purl.uniprot.org/enzyme/2.7.7.3
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP378F4063CB40A588
annotation: SIPEF21A0928B7C596C
annotation: SIP4C53DD69679F2042
annotation: SIPE22C91081C08F012
annotation: SIPED210419C4CDFBFB
annotation: SIP33D77CAC51B41DAA
annotation: SIP726EE512641AC6D9
annotation: PRO_1000118071
annotation: SIP190FF26853502418
annotation: SIP2A54EC3D900D9A2A
annotation: SIP23324E43DA958D25
annotation: SIP5B59835683D9CE5B
annotation: SIPA4476F44553889A1
annotation: SIPBC0B41F1336B82A0
annotation: SIP3B192B850EFB8EAC
annotation: SIPA022656FBEFF7F5E
annotation: SIPA5B1A8FE4DB80D23
annotation: SIPFEF6530FA9814F41
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/173
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/460
classified with: http://purl.uniprot.org/keywords/548
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005737
classified with: GO_0005524
classified with: GO_0004595
classified with: GO_0015937
sequence: MTKVVYPGTFDPITKGHLDILVRAAQVFDQVTLLVLSNLQKKSLFSLEERVRLAKSAIEESNAPSNIIVDSYEGVTVHYLEEHGIRLIIRGLRAVSDYEYEIQLFLANKYLNSQVETVLMPTSLRYQFVSSSLVKEMVSFGLDVSEFVTPTVERALKEKLEVKQ
proteome: Chromosome

B5Y7V9-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0669
type: Resource
database: eggNOG
comment: Bacteria

cd02163
type: Resource
database: CDD
comment: PPAT
signature sequence match: CDD cd02163 match 1

http://purl.uniprot.org/gene3d/3.40.50.620
type: Resource
database: Gene3D
comment: HUPs
signature sequence match: Gene3D 3.40.50.620 match 1

MF_00151
type: Resource
database: HAMAP
comment: PPAT_bact
signature sequence match: HAMAP MF 00151 match 1

IPR004821
type: Resource
database: InterPro
comment: Cyt_trans-like

IPR001980
type: Resource
database: InterPro
comment: PPAT

IPR014729
type: Resource
database: InterPro
comment: Rossmann-like_a/b/a_fold

PTHR21342
type: Resource
database: PANTHER
comment: PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE
signature sequence match: PANTHER PTHR21342 match 1

PTHR21342:SF1
type: Resource
database: PANTHER
comment: PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE
signature sequence match: PANTHER PTHR21342:SF1 match 1

PF01467
type: Resource
database: Pfam
comment: CTP_transf_like
signature sequence match: Pfam PF01467 match 1

PR01020
type: Resource
database: PRINTS
comment: LPSBIOSNTHSS

SSF52374
type: Resource
database: SUPFAM
comment: Nucleotidylyl transferase
signature sequence match: SUPFAM SSF52374 match 1

TIGR01510
type: Resource
database: TIGRFAMs
comment: coaD_prev_kdtB
signature sequence match: TIGRFAMs TIGR01510 match 1

TIGR00125
type: Resource
database: TIGRFAMs
comment: cyt_tran_rel
signature sequence match: TIGRFAMs TIGR00125 match 1

SIPF6F66FCD23803F87
type: Structured Name
full name: Phosphopantetheine adenylyltransferase
ec name: 2.7.7.3

SIPCEC148E019BD360F
type: Structured Name
full name: Dephospho-CoA pyrophosphorylase

SIP35682BD6712EB9F8
type: Structured Name
full name: Pantetheine-phosphate adenylyltransferase
short name: PPAT

coaD
type: Gene
locus name: COPRO5265_0497

SIP378F4063CB40A588
type: Function Annotation
comment: Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.

SIPED210419C4CDFBFB
type: Subunit Annotation
comment: Homohexamer.

SIP726EE512641AC6D9
type: Similarity Annotation
comment: Belongs to the bacterial CoaD family.

PRO_1000118071
type: Chain Annotation
comment: Phosphopantetheine adenylyltransferase
mass: 18612
range: 18636005759662382tt1tt164

18636005759662382tt1
type: Position
type: ExactPosition
position: 1
reference: MTKVVYPGTFDPITKGHLDILVRAAQVFDQVTLLVLSNLQKKSLFSLEERVRLAKSAIEESNAPSNIIVDSYEGVTVHYLEEHGIRLIIRGLRAVSDYEYEIQLFLANKYLNSQVETVLMPTSLRYQFVSSSLVKEMVSFGLDVSEFVTPTVERALKEKLEVKQ

18636005759662382tt164
type: Position
type: ExactPosition
position: 164
reference: MTKVVYPGTFDPITKGHLDILVRAAQVFDQVTLLVLSNLQKKSLFSLEERVRLAKSAIEESNAPSNIIVDSYEGVTVHYLEEHGIRLIIRGLRAVSDYEYEIQLFLANKYLNSQVETVLMPTSLRYQFVSSSLVKEMVSFGLDVSEFVTPTVERALKEKLEVKQ

18636005759662382tt9
type: Position
type: ExactPosition
position: 9
reference: MTKVVYPGTFDPITKGHLDILVRAAQVFDQVTLLVLSNLQKKSLFSLEERVRLAKSAIEESNAPSNIIVDSYEGVTVHYLEEHGIRLIIRGLRAVSDYEYEIQLFLANKYLNSQVETVLMPTSLRYQFVSSSLVKEMVSFGLDVSEFVTPTVERALKEKLEVKQ

18636005759662382tt10
type: Position
type: ExactPosition
position: 10
reference: MTKVVYPGTFDPITKGHLDILVRAAQVFDQVTLLVLSNLQKKSLFSLEERVRLAKSAIEESNAPSNIIVDSYEGVTVHYLEEHGIRLIIRGLRAVSDYEYEIQLFLANKYLNSQVETVLMPTSLRYQFVSSSLVKEMVSFGLDVSEFVTPTVERALKEKLEVKQ

18636005759662382tt17
type: Position
type: ExactPosition
position: 17
reference: MTKVVYPGTFDPITKGHLDILVRAAQVFDQVTLLVLSNLQKKSLFSLEERVRLAKSAIEESNAPSNIIVDSYEGVTVHYLEEHGIRLIIRGLRAVSDYEYEIQLFLANKYLNSQVETVLMPTSLRYQFVSSSLVKEMVSFGLDVSEFVTPTVERALKEKLEVKQ

18636005759662382tt41
type: Position
type: ExactPosition
position: 41
reference: MTKVVYPGTFDPITKGHLDILVRAAQVFDQVTLLVLSNLQKKSLFSLEERVRLAKSAIEESNAPSNIIVDSYEGVTVHYLEEHGIRLIIRGLRAVSDYEYEIQLFLANKYLNSQVETVLMPTSLRYQFVSSSLVKEMVSFGLDVSEFVTPTVERALKEKLEVKQ

18636005759662382tt76
type: Position
type: ExactPosition
position: 76
reference: MTKVVYPGTFDPITKGHLDILVRAAQVFDQVTLLVLSNLQKKSLFSLEERVRLAKSAIEESNAPSNIIVDSYEGVTVHYLEEHGIRLIIRGLRAVSDYEYEIQLFLANKYLNSQVETVLMPTSLRYQFVSSSLVKEMVSFGLDVSEFVTPTVERALKEKLEVKQ

18636005759662382tt90
type: Position
type: ExactPosition
position: 90
reference: MTKVVYPGTFDPITKGHLDILVRAAQVFDQVTLLVLSNLQKKSLFSLEERVRLAKSAIEESNAPSNIIVDSYEGVTVHYLEEHGIRLIIRGLRAVSDYEYEIQLFLANKYLNSQVETVLMPTSLRYQFVSSSLVKEMVSFGLDVSEFVTPTVERALKEKLEVKQ

18636005759662382tt91
type: Position
type: ExactPosition
position: 91
reference: MTKVVYPGTFDPITKGHLDILVRAAQVFDQVTLLVLSNLQKKSLFSLEERVRLAKSAIEESNAPSNIIVDSYEGVTVHYLEEHGIRLIIRGLRAVSDYEYEIQLFLANKYLNSQVETVLMPTSLRYQFVSSSLVKEMVSFGLDVSEFVTPTVERALKEKLEVKQ

18636005759662382tt93
type: Position
type: ExactPosition
position: 93
reference: MTKVVYPGTFDPITKGHLDILVRAAQVFDQVTLLVLSNLQKKSLFSLEERVRLAKSAIEESNAPSNIIVDSYEGVTVHYLEEHGIRLIIRGLRAVSDYEYEIQLFLANKYLNSQVETVLMPTSLRYQFVSSSLVKEMVSFGLDVSEFVTPTVERALKEKLEVKQ

18636005759662382tt101
type: Position
type: ExactPosition
position: 101
reference: MTKVVYPGTFDPITKGHLDILVRAAQVFDQVTLLVLSNLQKKSLFSLEERVRLAKSAIEESNAPSNIIVDSYEGVTVHYLEEHGIRLIIRGLRAVSDYEYEIQLFLANKYLNSQVETVLMPTSLRYQFVSSSLVKEMVSFGLDVSEFVTPTVERALKEKLEVKQ

18636005759662382tt126
type: Position
type: ExactPosition
position: 126
reference: MTKVVYPGTFDPITKGHLDILVRAAQVFDQVTLLVLSNLQKKSLFSLEERVRLAKSAIEESNAPSNIIVDSYEGVTVHYLEEHGIRLIIRGLRAVSDYEYEIQLFLANKYLNSQVETVLMPTSLRYQFVSSSLVKEMVSFGLDVSEFVTPTVERALKEKLEVKQ

18636005759662382tt132
type: Position
type: ExactPosition
position: 132
reference: MTKVVYPGTFDPITKGHLDILVRAAQVFDQVTLLVLSNLQKKSLFSLEERVRLAKSAIEESNAPSNIIVDSYEGVTVHYLEEHGIRLIIRGLRAVSDYEYEIQLFLANKYLNSQVETVLMPTSLRYQFVSSSLVKEMVSFGLDVSEFVTPTVERALKEKLEVKQ

SIPFEF6530FA9814F41
type: Site Annotation
comment: Transition state stabilizer
range: 18636005759662382tt17tt17

substrate

MTKVVYPGTFDPITKGHLDILVRAAQVFDQVTLLVLSNLQKKSLFSLEERVRLAKSAIEESNAPSNIIVDSYEGVTVHYLEEHGIRLIIRGLRAVSDYEYEIQLFLANKYLNSQVETVLMPTSLRYQFVSSSLVKEMVSFGLDVSEFVTPTVERALKEKLEVKQ
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 18612

http://purl.uniprot.org/uniprot/B5Y7V9#attribution-1FBF028CE5C20B3CECCC520D3E79044A
manual: true
evidence: ECO_0000255
source: MF_00151

B5Y8K7
type: Protein
reviewed: true
created: 2009-03-24
modified: 2023-02-22
version: 75
mnemonic: DCDB_COPPD
old mnemonic: DCD_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP8DDB235DD1195492
alternative name: SIPB4039589F437450E
alternative name: SIP64A2AE5DEED1E86A
enzyme: http://purl.uniprot.org/enzyme/3.5.4.30
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP6C749545AA55597A
annotation: SIP20701BD9DF84116C
annotation: SIP313F6DA7CA5F221F
annotation: SIP20A13068CC847A6B
annotation: SIP29568611CCE18B0B
annotation: PRO_1000096417
annotation: SIPA12C0C0D895395FA
annotation: SIP95A6A6FCA59AF5C2
annotation: SIPC8CBBDA2680B2603
annotation: SIPA5026481F084367B
annotation: SIP054C498BBC147E09
annotation: SIP4806AD8571CC38C3
annotation: SIP129A0913B55BCD49
annotation: SIP177EC21B3E28872B
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/378
classified with: http://purl.uniprot.org/keywords/546
classified with: http://purl.uniprot.org/keywords/547
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0033973
classified with: GO_0008829
classified with: GO_0000166
classified with: GO_0006226
classified with: GO_0006229
sequence: MILSDGLIKELISYRALVIEPLSETQIQPSSVDLTLGSTFLAIDNINVPFLDPKRKETIKYREIHIEKGGQLILQPGFFLLGTTTERLMLPNFLVARVEGRSSLGRMGILIHATAGYVDPGFCGQITLEISNVNNIPVALYPGMRICQVSFELLFENCVIPYGLKGKYQGQEGPEGTRIFLDFLKE
proteome: Chromosome

B5Y8K7-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0717
type: Resource
database: eggNOG
comment: Bacteria

cd07557
type: Resource
database: CDD
comment: trimeric_dUTPase
signature sequence match: CDD cd07557 match 1

MF_00146
type: Resource
database: HAMAP
comment: dCTP_deaminase
signature sequence match: HAMAP MF 00146 match 1

IPR010550
type: Resource
database: InterPro
comment: dCTP_deam_bac

IPR011962
type: Resource
database: InterPro
comment: dCTP_deaminase

IPR036157
type: Resource
database: InterPro
comment: dUTPase-like_sf

IPR033704
type: Resource
database: InterPro
comment: dUTPase_trimeric

PTHR42680
type: Resource
database: PANTHER
comment: DCTP DEAMINASE
signature sequence match: PANTHER PTHR42680 match 1

PTHR42680:SF3
type: Resource
database: PANTHER
comment: DCTP DEAMINASE
signature sequence match: PANTHER PTHR42680:SF3 match 1

PF06559
type: Resource
database: Pfam
comment: DCD
signature sequence match: Pfam PF06559 match 1

SSF51283
type: Resource
database: SUPFAM
comment: dUTPase-like
signature sequence match: SUPFAM SSF51283 match 1

TIGR02274
type: Resource
database: TIGRFAMs
comment: dCTP_deam
signature sequence match: TIGRFAMs TIGR02274 match 1

SIP8DDB235DD1195492
type: Structured Name
full name: dCTP deaminase, dUMP-forming
ec name: 3.5.4.30

SIPB4039589F437450E
type: Structured Name
full name: Bifunctional dCTP deaminase:dUTPase

SIP64A2AE5DEED1E86A
type: Structured Name
full name: DCD-DUT

dcd
type: Gene
locus name: COPRO5265_0757

SIP6C749545AA55597A
type: Function Annotation
comment: Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate.

SIP20A13068CC847A6B
type: Subunit Annotation
comment: Homotrimer.

SIP29568611CCE18B0B
type: Similarity Annotation
comment: Belongs to the dCTP deaminase family.

PRO_1000096417
type: Chain Annotation
comment: dCTP deaminase, dUMP-forming
mass: 20704
range: 18636005775718190tt1tt186

18636005775718190tt1
type: Position
type: ExactPosition
position: 1
reference: MILSDGLIKELISYRALVIEPLSETQIQPSSVDLTLGSTFLAIDNINVPFLDPKRKETIKYREIHIEKGGQLILQPGFFLLGTTTERLMLPNFLVARVEGRSSLGRMGILIHATAGYVDPGFCGQITLEISNVNNIPVALYPGMRICQVSFELLFENCVIPYGLKGKYQGQEGPEGTRIFLDFLKE

18636005775718190tt186
type: Position
type: ExactPosition
position: 186
reference: MILSDGLIKELISYRALVIEPLSETQIQPSSVDLTLGSTFLAIDNINVPFLDPKRKETIKYREIHIEKGGQLILQPGFFLLGTTTERLMLPNFLVARVEGRSSLGRMGILIHATAGYVDPGFCGQITLEISNVNNIPVALYPGMRICQVSFELLFENCVIPYGLKGKYQGQEGPEGTRIFLDFLKE

SIPA12C0C0D895395FA
type: Active Site Annotation
comment: Proton donor/acceptor
range: 18636005775718190tt129tt129

18636005775718190tt129
type: Position
type: ExactPosition
position: 129
reference: MILSDGLIKELISYRALVIEPLSETQIQPSSVDLTLGSTFLAIDNINVPFLDPKRKETIKYREIHIEKGGQLILQPGFFLLGTTTERLMLPNFLVARVEGRSSLGRMGILIHATAGYVDPGFCGQITLEISNVNNIPVALYPGMRICQVSFELLFENCVIPYGLKGKYQGQEGPEGTRIFLDFLKE

18636005775718190tt101
type: Position
type: ExactPosition
position: 101
reference: MILSDGLIKELISYRALVIEPLSETQIQPSSVDLTLGSTFLAIDNINVPFLDPKRKETIKYREIHIEKGGQLILQPGFFLLGTTTERLMLPNFLVARVEGRSSLGRMGILIHATAGYVDPGFCGQITLEISNVNNIPVALYPGMRICQVSFELLFENCVIPYGLKGKYQGQEGPEGTRIFLDFLKE

18636005775718190tt106
type: Position
type: ExactPosition
position: 106
reference: MILSDGLIKELISYRALVIEPLSETQIQPSSVDLTLGSTFLAIDNINVPFLDPKRKETIKYREIHIEKGGQLILQPGFFLLGTTTERLMLPNFLVARVEGRSSLGRMGILIHATAGYVDPGFCGQITLEISNVNNIPVALYPGMRICQVSFELLFENCVIPYGLKGKYQGQEGPEGTRIFLDFLKE

18636005775718190tt119
type: Position
type: ExactPosition
position: 119
reference: MILSDGLIKELISYRALVIEPLSETQIQPSSVDLTLGSTFLAIDNINVPFLDPKRKETIKYREIHIEKGGQLILQPGFFLLGTTTERLMLPNFLVARVEGRSSLGRMGILIHATAGYVDPGFCGQITLEISNVNNIPVALYPGMRICQVSFELLFENCVIPYGLKGKYQGQEGPEGTRIFLDFLKE

18636005775718190tt127
type: Position
type: ExactPosition
position: 127
reference: MILSDGLIKELISYRALVIEPLSETQIQPSSVDLTLGSTFLAIDNINVPFLDPKRKETIKYREIHIEKGGQLILQPGFFLLGTTTERLMLPNFLVARVEGRSSLGRMGILIHATAGYVDPGFCGQITLEISNVNNIPVALYPGMRICQVSFELLFENCVIPYGLKGKYQGQEGPEGTRIFLDFLKE

18636005775718190tt148
type: Position
type: ExactPosition
position: 148
reference: MILSDGLIKELISYRALVIEPLSETQIQPSSVDLTLGSTFLAIDNINVPFLDPKRKETIKYREIHIEKGGQLILQPGFFLLGTTTERLMLPNFLVARVEGRSSLGRMGILIHATAGYVDPGFCGQITLEISNVNNIPVALYPGMRICQVSFELLFENCVIPYGLKGKYQGQEGPEGTRIFLDFLKE

18636005775718190tt162
type: Position
type: ExactPosition
position: 162
reference: MILSDGLIKELISYRALVIEPLSETQIQPSSVDLTLGSTFLAIDNINVPFLDPKRKETIKYREIHIEKGGQLILQPGFFLLGTTTERLMLPNFLVARVEGRSSLGRMGILIHATAGYVDPGFCGQITLEISNVNNIPVALYPGMRICQVSFELLFENCVIPYGLKGKYQGQEGPEGTRIFLDFLKE

18636005775718190tt171
type: Position
type: ExactPosition
position: 171
reference: MILSDGLIKELISYRALVIEPLSETQIQPSSVDLTLGSTFLAIDNINVPFLDPKRKETIKYREIHIEKGGQLILQPGFFLLGTTTERLMLPNFLVARVEGRSSLGRMGILIHATAGYVDPGFCGQITLEISNVNNIPVALYPGMRICQVSFELLFENCVIPYGLKGKYQGQEGPEGTRIFLDFLKE

SIP177EC21B3E28872B
type: Site Annotation
comment: Important for bifunctional activity
range: 18636005775718190tt116tt117

18636005775718190tt116
type: Position
type: ExactPosition
position: 116
reference: MILSDGLIKELISYRALVIEPLSETQIQPSSVDLTLGSTFLAIDNINVPFLDPKRKETIKYREIHIEKGGQLILQPGFFLLGTTTERLMLPNFLVARVEGRSSLGRMGILIHATAGYVDPGFCGQITLEISNVNNIPVALYPGMRICQVSFELLFENCVIPYGLKGKYQGQEGPEGTRIFLDFLKE

18636005775718190tt117
type: Position
type: ExactPosition
position: 117
reference: MILSDGLIKELISYRALVIEPLSETQIQPSSVDLTLGSTFLAIDNINVPFLDPKRKETIKYREIHIEKGGQLILQPGFFLLGTTTERLMLPNFLVARVEGRSSLGRMGILIHATAGYVDPGFCGQITLEISNVNNIPVALYPGMRICQVSFELLFENCVIPYGLKGKYQGQEGPEGTRIFLDFLKE

MILSDGLIKELISYRALVIEPLSETQIQPSSVDLTLGSTFLAIDNINVPFLDPKRKETIKYREIHIEKGGQLILQPGFFLLGTTTERLMLPNFLVARVEGRSSLGRMGILIHATAGYVDPGFCGQITLEISNVNNIPVALYPGMRICQVSFELLFENCVIPYGLKGKYQGQEGPEGTRIFLDFLKE
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 20704

http://purl.uniprot.org/uniprot/B5Y8K7#attribution-3ABB7F69A8843C04FE288B6707F5AE21
manual: true
evidence: ECO_0000255
source: MF_00146

B5Y8C8
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 86
mnemonic: DDL_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP97EEA9C6D689407F
alternative name: SIP68E9DEFDB2526EAF
alternative name: SIPB2B37D09B53E5142
enzyme: http://purl.uniprot.org/enzyme/6.3.2.4
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPD2784EA489F503D6
annotation: SIPB7F4CCB0B1BB5E9E
annotation: SIPC0705083760F7CDB
annotation: SIPB2151186FC2766FA
annotation: SIP748F83F357370DA9
annotation: SIP664A041FA390BED9
annotation: PRO_1000116635
annotation: SIPB41C1A1DFD2B7652
annotation: SIP44C4C1EBCBBEA4AF
annotation: SIP9400741791EF6DE2
annotation: SIPC19D2CFF6E2DF22C
annotation: SIP4C128C3080C8AA90
annotation: SIP73F2A6750ED5F23C
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/961
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/436
classified with: http://purl.uniprot.org/keywords/460
classified with: http://purl.uniprot.org/keywords/464
classified with: http://purl.uniprot.org/keywords/479
classified with: http://purl.uniprot.org/keywords/573
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005737
classified with: GO_0005524
classified with: GO_0008716
classified with: GO_0046872
classified with: GO_0071555
classified with: GO_0009252
classified with: GO_0008360
sequence: B5Y8C8-1
proteome: Chromosome

B5Y8C8-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG1181
type: Resource
database: eggNOG
comment: Bacteria

http://purl.uniprot.org/gene3d/3.30.1490.20
type: Resource
database: Gene3D
comment: ATP-grasp fold, A domain
signature sequence match: Gene3D 3.30.1490.20 match 1

http://purl.uniprot.org/gene3d/3.30.470.20
type: Resource
database: Gene3D
comment: ATP-grasp fold, B domain
signature sequence match: Gene3D 3.30.470.20 match 1

MF_00047
type: Resource
database: HAMAP
comment: Dala_Dala_lig
signature sequence match: HAMAP MF 00047 match 1

IPR011761
type: Resource
database: InterPro
comment: ATP-grasp

IPR013815
type: Resource
database: InterPro
comment: ATP_grasp_subdomain_1

IPR000291
type: Resource
database: InterPro
comment: D-Ala_lig_Van_CS

IPR005905
type: Resource
database: InterPro
comment: D_ala_D_ala

IPR011095
type: Resource
database: InterPro
comment: Dala_Dala_lig_C

IPR011127
type: Resource
database: InterPro
comment: Dala_Dala_lig_N

IPR016185
type: Resource
database: InterPro
comment: PreATP-grasp_dom_sf

PTHR23132
type: Resource
database: PANTHER
comment: D-ALANINE--D-ALANINE LIGASE
signature sequence match: PANTHER PTHR23132 match 1

PTHR23132:SF23
type: Resource
database: PANTHER
comment: D-ALANINE--D-ALANINE LIGASE B
signature sequence match: PANTHER PTHR23132:SF23 match 1

PF07478
type: Resource
database: Pfam
comment: Dala_Dala_lig_C
signature sequence match: Pfam PF07478 match 1

PF01820
type: Resource
database: Pfam
comment: Dala_Dala_lig_N
signature sequence match: Pfam PF01820 match 1

PIRSF039102
type: Resource
database: PIRSF
comment: Ddl/VanB
signature sequence match: PIRSF PIRSF039102 match 1

SSF56059
type: Resource
database: SUPFAM
comment: Glutathione synthetase ATP-binding domain-like
signature sequence match: SUPFAM SSF56059 match 1

SSF52440
type: Resource
database: SUPFAM
comment: PreATP-grasp domain
signature sequence match: SUPFAM SSF52440 match 1

TIGR01205
type: Resource
database: TIGRFAMs
comment: D_ala_D_alaTIGR
signature sequence match: TIGRFAMs TIGR01205 match 1

PS50975
type: Resource
database: PROSITE
comment: ATP_GRASP
signature sequence match: PROSITE PS50975 match 1

PS00843
type: Resource
database: PROSITE
comment: DALA_DALA_LIGASE_1
signature sequence match: PROSITE PS00843 match 1

PS00844
type: Resource
database: PROSITE
comment: DALA_DALA_LIGASE_2
signature sequence match: PROSITE PS00844 match 1

SIP97EEA9C6D689407F
type: Structured Name
full name: D-alanine--D-alanine ligase
ec name: 6.3.2.4

SIP68E9DEFDB2526EAF
type: Structured Name
full name: D-Ala-D-Ala ligase

SIPB2B37D09B53E5142
type: Structured Name
full name: D-alanylalanine synthetase

ddl
type: Gene
locus name: COPRO5265_0677

SIPD2784EA489F503D6
type: Function Annotation
comment: Cell wall formation.

SIPC0705083760F7CDB
type: Cofactor Annotation
comment: Binds 2 magnesium or manganese ions per subunit.
cofactor: CHEBI_18420
cofactor: CHEBI_29035

SIP664A041FA390BED9
type: Similarity Annotation
comment: Belongs to the D-alanine--D-alanine ligase family.

PRO_1000116635
type: Chain Annotation
comment: D-alanine--D-alanine ligase
mass: 33710
range: 18636005775194158tt1tt304

18636005775194158tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y8C8-1

18636005775194158tt304
type: Position
type: ExactPosition
position: 304
reference: B5Y8C8-1

SIPB41C1A1DFD2B7652
type: Domain Extent Annotation
comment: ATP-grasp
range: 18636005775194158tt100tt301

18636005775194158tt100
type: Position
type: ExactPosition
position: 100
reference: B5Y8C8-1

18636005775194158tt301
type: Position
type: ExactPosition
position: 301
reference: B5Y8C8-1

18636005775194158tt129
type: Position
type: ExactPosition
position: 129
reference: B5Y8C8-1

18636005775194158tt184
type: Position
type: ExactPosition
position: 184
reference: B5Y8C8-1

18636005775194158tt256
type: Position
type: ExactPosition
position: 256
reference: B5Y8C8-1

18636005775194158tt268
type: Position
type: ExactPosition
position: 268
reference: B5Y8C8-1

18636005775194158tt270
type: Position
type: ExactPosition
position: 270
reference: B5Y8C8-1

1
subclass of: CHEBI_18420

2
subclass of: CHEBI_18420

B5Y8C8-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 33710
value: MNIVVLFGGTSPEREISLKSGENIAATLRARGHQVETLDTAVPNFVEQLMQLKPDCVFPALHGADGEDGKIQGLLSILHIPYVGSDVRASVITMDKYLTKLVALQSGIPTPSFIYVYDPHLVPDYWDVERKLGSPFIVKPCDVGSTIGLSLVRSASEYEVALEEAFRFSDRLLLEEFIDGFEVTVGLFRLGGDFLVLPPIYVVKPDRIFDYDTKYKPGGAKHVYDLPISVEARERLTSYSKRICKIVGIGGVARLDYIVKDETPYLLEINSIPGMTAESLVPDEVRHAGRDFGEFLEDLIKDAL

http://purl.uniprot.org/uniprot/B5Y8C8#attribution-609619A7DF3E53CE5E48EDEF8B8F9DD1
manual: true
evidence: ECO_0000250

http://purl.uniprot.org/uniprot/B5Y8C8#attribution-A0A5C738C775730E0CCEA3AE6FA50A40
manual: true
evidence: ECO_0000255
source: MF_00047

B5Y7V3
type: Protein
reviewed: true
created: 2009-09-22
modified: 2023-02-22
version: 76
mnemonic: DEOC_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP0E982507E7BF8976
alternative name: SIP373D8463696F2E1E
alternative name: SIPB67C7DC9FEF60F4F
enzyme: http://purl.uniprot.org/enzyme/4.1.2.4
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP8A86725A7AF99592
annotation: SIP459C92186719D298
annotation: SIPC83B3AE178EC51F0
annotation: SIPAAC35E46179B1750
annotation: SIPE1D0D9626F06994C
annotation: PRO_1000202963
annotation: SIP54289BCB54CBEDB1
annotation: SIPB71C0C343A112A6E
annotation: SIPB56DF5505AEFF047
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/456
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/704
classified with: GO_0005737
classified with: GO_0004139
classified with: GO_0016052
classified with: GO_0009264
classified with: GO_0046386
sequence: B5Y7V3-1
proteome: Chromosome

B5Y7V3-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0274
type: Resource
database: eggNOG
comment: Bacteria

cd00959
type: Resource
database: CDD
comment: DeoC
signature sequence match: CDD cd00959 match 1

http://purl.uniprot.org/gene3d/3.20.20.70
type: Resource
database: Gene3D
comment: Aldolase class I
signature sequence match: Gene3D 3.20.20.70 match 1

MF_00114
type: Resource
database: HAMAP
comment: DeoC_type1
signature sequence match: HAMAP MF 00114 match 1

IPR013785
type: Resource
database: InterPro
comment: Aldolase_TIM

IPR011343
type: Resource
database: InterPro
comment: DeoC

IPR002915
type: Resource
database: InterPro
comment: DeoC/FbaB/LacD_aldolase

IPR028581
type: Resource
database: InterPro
comment: DeoC_typeI

PTHR10889:SF1
type: Resource
database: PANTHER
comment: 2-DEOXY-D-RIBOSE 5-PHOSPHATE ALDOLASE
signature sequence match: PANTHER PTHR10889:SF1 match 1

PTHR10889
type: Resource
database: PANTHER
comment: DEOXYRIBOSE-PHOSPHATE ALDOLASE
signature sequence match: PANTHER PTHR10889 match 1

PF01791
type: Resource
database: Pfam
comment: DeoC
signature sequence match: Pfam PF01791 match 1

PIRSF001357
type: Resource
database: PIRSF
comment: DeoC
signature sequence match: PIRSF PIRSF001357 match 1

SM01133
type: Resource
database: SMART
comment: DeoC
signature sequence match: SMART SM01133 match 1

SSF51569
type: Resource
database: SUPFAM
comment: Aldolase
signature sequence match: SUPFAM SSF51569 match 1

TIGR00126
type: Resource
database: TIGRFAMs
comment: deoC
signature sequence match: TIGRFAMs TIGR00126 match 1

SIP0E982507E7BF8976
type: Structured Name
full name: Deoxyribose-phosphate aldolase
short name: DERA
ec name: 4.1.2.4

SIP373D8463696F2E1E
type: Structured Name
full name: 2-deoxy-D-ribose 5-phosphate aldolase

SIPB67C7DC9FEF60F4F
type: Structured Name
full name: Phosphodeoxyriboaldolase
short name: Deoxyriboaldolase

deoC
type: Gene
locus name: COPRO5265_0491

SIP8A86725A7AF99592
type: Function Annotation
comment: Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.

SIPE1D0D9626F06994C
type: Similarity Annotation
comment: Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.

PRO_1000202963
type: Chain Annotation
comment: Deoxyribose-phosphate aldolase
mass: 23200
range: 18636005759660846tt1tt219

18636005759660846tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y7V3-1

18636005759660846tt219
type: Position
type: ExactPosition
position: 219
reference: B5Y7V3-1

SIP54289BCB54CBEDB1
type: Active Site Annotation
comment: Proton donor/acceptor
range: 18636005759660846tt89tt89

18636005759660846tt89
type: Position
type: ExactPosition
position: 89
reference: B5Y7V3-1

SIPB71C0C343A112A6E
type: Active Site Annotation
comment: Schiff-base intermediate with acetaldehyde
range: 18636005759660846tt151tt151

18636005759660846tt151
type: Position
type: ExactPosition
position: 151
reference: B5Y7V3-1

SIPB56DF5505AEFF047
type: Active Site Annotation
comment: Proton donor/acceptor
range: 18636005759660846tt180tt180

18636005759660846tt180
type: Position
type: ExactPosition
position: 180
reference: B5Y7V3-1

B5Y7V3-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 23200
value: MEYNRLIDHTLLKADATVEQIEKLCKEALQYNFFSVCVNSAFVPLAKSFLEGSDVKVATTIGFPLGASATAVKAFEVEQALKEGADEFDMVINVGWLKSKLYRLVHEDIAEVVKAAGGKVVKVIIETCYLTDDEKKIASSIAAAAGAHYVKTSTGFGTGGATVEDVQLIRSVVGPNIGVKASGGIRDAATLKAMVDAGANRIGASASVKIMEELRIEGN

http://purl.uniprot.org/uniprot/B5Y7V3#attribution-D051BD8BB754F39F914034C8E7D0A74A
manual: true
evidence: ECO_0000255
source: MF_00114

B5Y6V5
type: Protein
reviewed: true
created: 2009-07-28
modified: 2023-02-22
version: 82
mnemonic: DNLJ_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP61544389502FCBE3
alternative name: SIPBF6E3D52175D0838
enzyme: http://purl.uniprot.org/enzyme/6.5.1.2
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP33EBB55072FF8569
annotation: SIP613EF6054F9912DE
annotation: SIP36839D6E443B01AF
annotation: SIP81BBBB83F952D809
annotation: PRO_0000380347
annotation: SIP775D3EAD73E2B531
annotation: SIP0FBCAC170E59E5EF
annotation: SIP133A76F84681FEB2
annotation: SIPF5DB3EFEB0179EE4
annotation: SIP9CC87B0D3BCD82CA
annotation: SIP2D4E65D1298AF9DC
annotation: SIP92EEB138730A4FF2
annotation: SIP35943A8FFE8A45BE
annotation: SIP92FE027A7A802692
annotation: SIP934445BDBD69FEC1
annotation: SIP7EC0F2CB5A69E50B
annotation: SIP35C0A7429053FAA0
annotation: SIPEAB06194139B7ED7
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/234
classified with: http://purl.uniprot.org/keywords/235
classified with: http://purl.uniprot.org/keywords/436
classified with: http://purl.uniprot.org/keywords/460
classified with: http://purl.uniprot.org/keywords/464
classified with: http://purl.uniprot.org/keywords/479
classified with: http://purl.uniprot.org/keywords/520
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/862
classified with: GO_0003677
classified with: GO_0003911
classified with: GO_0046872
classified with: GO_0006281
classified with: GO_0006260
sequence: B5Y6V5-1
proteome: Chromosome

B5Y6V5-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0272
type: Resource
database: eggNOG
comment: Bacteria

cd17748
type: Resource
database: CDD
comment: BRCT_DNA_ligase_like
signature sequence match: CDD cd17748 match 1

cd00114
type: Resource
database: CDD
comment: LIGANc
signature sequence match: CDD cd00114 match 1

http://purl.uniprot.org/gene3d/1.10.150.20
type: Resource
database: Gene3D
comment: 5' to 3' exonuclease, C-terminal subdomain
signature sequence match: Gene3D 1.10.150.20 match 1
signature sequence match: Gene3D 1.10.150.20 match 2

http://purl.uniprot.org/gene3d/3.40.50.10190
type: Resource
database: Gene3D
comment: BRCT domain
signature sequence match: Gene3D 3.40.50.10190 match 1

http://purl.uniprot.org/gene3d/3.30.470.30
type: Resource
database: Gene3D
comment: DNA ligase/mRNA capping enzyme
signature sequence match: Gene3D 3.30.470.30 match 1

http://purl.uniprot.org/gene3d/1.10.287.610
type: Resource
database: Gene3D
comment: Helix hairpin bin
signature sequence match: Gene3D 1.10.287.610 match 1

http://purl.uniprot.org/gene3d/2.40.50.140
type: Resource
database: Gene3D
comment: Nucleic acid-binding proteins
signature sequence match: Gene3D 2.40.50.140 match 1
signature sequence match: Gene3D 2.40.50.140 match 2

MF_01588
type: Resource
database: HAMAP
comment: DNA_ligase_A
signature sequence match: HAMAP MF 01588 match 1

IPR001357
type: Resource
database: InterPro
comment: BRCT_dom

IPR036420
type: Resource
database: InterPro
comment: BRCT_dom_sf

IPR041663
type: Resource
database: InterPro
comment: DisA/LigA_HHH

IPR018239
type: Resource
database: InterPro
comment: DNA_ligase_AS

IPR033136
type: Resource
database: InterPro
comment: DNA_ligase_CS

IPR001679
type: Resource
database: InterPro
comment: DNAligase

IPR013839
type: Resource
database: InterPro
comment: DNAligase_adenylation

IPR013840
type: Resource
database: InterPro
comment: DNAligase_N

IPR003583
type: Resource
database: InterPro
comment: Hlx-hairpin-Hlx_DNA-bd_motif

IPR012340
type: Resource
database: InterPro
comment: NA-bd_OB-fold

IPR004150
type: Resource
database: InterPro
comment: NAD_DNA_ligase_OB

IPR010994
type: Resource
database: InterPro
comment: RuvA_2-like

PTHR23389
type: Resource
database: PANTHER
comment: CHROMOSOME TRANSMISSION FIDELITY FACTOR 18
signature sequence match: PANTHER PTHR23389 match 1

PTHR23389:SF9
type: Resource
database: PANTHER
comment: DNA LIGASE
signature sequence match: PANTHER PTHR23389:SF9 match 1

PF00533
type: Resource
database: Pfam
comment: BRCT
signature sequence match: Pfam PF00533 match 1

PF01653
type: Resource
database: Pfam
comment: DNA_ligase_aden
signature sequence match: Pfam PF01653 match 1

PF03120
type: Resource
database: Pfam
comment: DNA_ligase_OB
signature sequence match: Pfam PF03120 match 1

PF12826
type: Resource
database: Pfam
comment: HHH_2
signature sequence match: Pfam PF12826 match 1

PF14520
type: Resource
database: Pfam
comment: HHH_5
signature sequence match: Pfam PF14520 match 1

PIRSF001604
type: Resource
database: PIRSF
comment: LigA
signature sequence match: PIRSF PIRSF001604 match 1

SM00292
type: Resource
database: SMART
comment: BRCT
signature sequence match: SMART SM00292 match 1

SM00278
type: Resource
database: SMART
comment: HhH1
signature sequence match: SMART SM00278 match 1
signature sequence match: SMART SM00278 match 2
signature sequence match: SMART SM00278 match 3
signature sequence match: SMART SM00278 match 4

SM00532
type: Resource
database: SMART
comment: LIGANc
signature sequence match: SMART SM00532 match 1

SSF52113
type: Resource
database: SUPFAM
comment: BRCT domain
signature sequence match: SUPFAM SSF52113 match 1

SSF56091
type: Resource
database: SUPFAM
comment: DNA ligase/mRNA capping enzyme, catalytic domain
signature sequence match: SUPFAM SSF56091 match 1

SSF50249
type: Resource
database: SUPFAM
comment: Nucleic acid-binding proteins
signature sequence match: SUPFAM SSF50249 match 1
signature sequence match: SUPFAM SSF50249 match 2

SSF47781
type: Resource
database: SUPFAM
comment: RuvA domain 2-like
signature sequence match: SUPFAM SSF47781 match 1

TIGR00575
type: Resource
database: TIGRFAMs
comment: dnlj
signature sequence match: TIGRFAMs TIGR00575 match 1

PS50172
type: Resource
database: PROSITE
comment: BRCT
signature sequence match: PROSITE PS50172 match 1

PS01055
type: Resource
database: PROSITE
comment: DNA_LIGASE_N1
signature sequence match: PROSITE PS01055 match 1

PS01056
type: Resource
database: PROSITE
comment: DNA_LIGASE_N2
signature sequence match: PROSITE PS01056 match 1

SIP61544389502FCBE3
type: Structured Name
full name: DNA ligase
ec name: 6.5.1.2

SIPBF6E3D52175D0838
type: Structured Name
full name: Polydeoxyribonucleotide synthase [NAD(+)]

ligA
type: Gene
locus name: COPRO5265_0132

SIP33EBB55072FF8569
type: Function Annotation
comment: DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.

SIP81BBBB83F952D809
type: Similarity Annotation
comment: Belongs to the NAD-dependent DNA ligase family. LigA subfamily.

PRO_0000380347
type: Chain Annotation
comment: DNA ligase
mass: 74776
range: 18636005742884142tt1tt666

18636005742884142tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y6V5-1

18636005742884142tt666
type: Position
type: ExactPosition
position: 666
reference: B5Y6V5-1

SIP775D3EAD73E2B531
type: Domain Extent Annotation
comment: BRCT
range: 18636005742884142tt584tt666

18636005742884142tt584
type: Position
type: ExactPosition
position: 584
reference: B5Y6V5-1

SIP0FBCAC170E59E5EF
type: Active Site Annotation
comment: N6-AMP-lysine intermediate
range: 18636005742884142tt116tt116

18636005742884142tt116
type: Position
type: ExactPosition
position: 116
reference: B5Y6V5-1

18636005742884142tt34
type: Position
type: ExactPosition
position: 34
reference: B5Y6V5-1

18636005742884142tt38
type: Position
type: ExactPosition
position: 38
reference: B5Y6V5-1

18636005742884142tt83
type: Position
type: ExactPosition
position: 83
reference: B5Y6V5-1

18636005742884142tt84
type: Position
type: ExactPosition
position: 84
reference: B5Y6V5-1

18636005742884142tt114
type: Position
type: ExactPosition
position: 114
reference: B5Y6V5-1

18636005742884142tt137
type: Position
type: ExactPosition
position: 137
reference: B5Y6V5-1

18636005742884142tt174
type: Position
type: ExactPosition
position: 174
reference: B5Y6V5-1

18636005742884142tt290
type: Position
type: ExactPosition
position: 290
reference: B5Y6V5-1

18636005742884142tt314
type: Position
type: ExactPosition
position: 314
reference: B5Y6V5-1

18636005742884142tt408
type: Position
type: ExactPosition
position: 408
reference: B5Y6V5-1

18636005742884142tt411
type: Position
type: ExactPosition
position: 411
reference: B5Y6V5-1

18636005742884142tt424
type: Position
type: ExactPosition
position: 424
reference: B5Y6V5-1

18636005742884142tt429
type: Position
type: ExactPosition
position: 429
reference: B5Y6V5-1

B5Y6V5-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 74776
value: MTREEAKKRIERLRELIEYHNYRYYVLDSPEISDEEYDKLYRELVTLEKQFPEFITPDSPTQRVGAPPAKEFATVTHEVPMLSLDNAFTEDEIKAFDQRVRSALNQQHVEYFCEHKLDGLAVSLLYENGLFVRGSTRGNGYVGEDVTANLKTIKTIPLRLKGENIPPVVEIRGEAFMMLRDFEALNEQRQALGQPLFANPRNAAAGSIRQLDSSITAQRKLYFMPYGFGLVQGMDFETQERFLKQCQEWGFRINEHNRKASSIEEALEFIRYWTEHRVELPFPADGVVIKVNNLRYWDILGTTAHAPRYAIAYKFPAEEKETKLKDVVFQVGRTGIITPVAMLEPVVLDGATVSRATLHNFDIVRQLDVRKGDVVKLKRAGMVIPEIIGVAAEKRTGKEEQIEPPTTCPVCGGPTEWDGAYLKCVNITCPAQLKGHLLHWASRDAMDIDGLGESIIENLVDMGLVKNIADLYKLSVQDLLTLPRLAQRSATKLYENIQRSKDRPFFRVLYGLGIPRVGLKTAQMLAEHFGSINALLNATMDELTSIEGIGTDTAETILKALQSPQVHELIDQLKTLGLKMEQESIEGPLKGLTFVFTGTLTSMSRGDAAKLVQSLGGKVASSVSKNVDYVVVGEDPGSKLDKAQKLGLTIIDEEAFLKMVKREHNG

http://purl.uniprot.org/uniprot/B5Y6V5#attribution-205EE578AABEFC2A9D16E41084DB3D31
manual: true
evidence: ECO_0000255
source: MF_01588

B5Y8M4
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 77
mnemonic: EFP_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP42E8051B8F3706F6
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP09EB06D93EB45D14
annotation: SIP27071F60D9CB66B3
annotation: SIP3139A0C870AB5428
annotation: SIPD19890AA9992E4D8
annotation: PRO_1000117889
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/251
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005737
classified with: GO_0003746
sequence: MISTNDLRPGIIVDLDGTLYLIVTAQHVKPGKGSAFVRVKMKKLSDGSTIEQTFRAGEKVQRAYLETKQMQYLYSDGEHFVFMDTDTYEQVTLSGDIMSDVQQWLKEGMMVNVQFYQGKAVGIEVPTFVELEVVETEPGVRGDTAQGGSKPAKLETGAVVQVPLFITEGDIIRVDTRTGEYVERVG
proteome: Chromosome

B5Y8M4-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0231
type: Resource
database: eggNOG
comment: Bacteria

cd04470
type: Resource
database: CDD
comment: S1_EF-P_repeat_1
signature sequence match: CDD cd04470 match 1

cd05794
type: Resource
database: CDD
comment: S1_EF-P_repeat_2
signature sequence match: CDD cd05794 match 1

MF_00141
type: Resource
database: HAMAP
comment: EF_P
signature sequence match: HAMAP MF 00141 match 1

IPR015365
type: Resource
database: InterPro
comment: Elong-fact-P_C

IPR014722
type: Resource
database: InterPro
comment: Rib_L2_dom2

IPR020599
type: Resource
database: InterPro
comment: Transl_elong_fac_P/YeiP

IPR013185
type: Resource
database: InterPro
comment: Transl_elong_KOW-like

IPR001059
type: Resource
database: InterPro
comment: Transl_elong_P/YeiP_cen

IPR013852
type: Resource
database: InterPro
comment: Transl_elong_P/YeiP_CS

IPR011768
type: Resource
database: InterPro
comment: Transl_elongation_fac_P

IPR008991
type: Resource
database: InterPro
comment: Translation_prot_SH3-like_sf

PTHR30053
type: Resource
database: PANTHER
comment: ELONGATION FACTOR P
signature sequence match: PANTHER PTHR30053 match 1

PTHR30053:SF12
type: Resource
database: PANTHER
comment: ELONGATION FACTOR P (EF-P) FAMILY PROTEIN
signature sequence match: PANTHER PTHR30053:SF12 match 1

PF01132
type: Resource
database: Pfam
comment: EFP
signature sequence match: Pfam PF01132 match 1

PF08207
type: Resource
database: Pfam
comment: EFP_N
signature sequence match: Pfam PF08207 match 1

PF09285
type: Resource
database: Pfam
comment: Elong-fact-P_C
signature sequence match: Pfam PF09285 match 1

PIRSF005901
type: Resource
database: PIRSF
comment: EF-P
signature sequence match: PIRSF PIRSF005901 match 1

SM01185
type: Resource
database: SMART
comment: EFP
signature sequence match: SMART SM01185 match 1

SM00841
type: Resource
database: SMART
comment: Elong-fact-P_C
signature sequence match: SMART SM00841 match 1

SSF50104
type: Resource
database: SUPFAM
comment: Translation proteins SH3-like domain
signature sequence match: SUPFAM SSF50104 match 1

TIGR00038
type: Resource
database: TIGRFAMs
comment: efp
signature sequence match: TIGRFAMs TIGR00038 match 1

PS01275
type: Resource
database: PROSITE
comment: EFP
signature sequence match: PROSITE PS01275 match 1

SIP42E8051B8F3706F6
type: Structured Name
full name: Elongation factor P
short name: EF-P

efp
type: Gene
locus name: COPRO5265_0774

SIP09EB06D93EB45D14
type: Function Annotation
comment: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.

SIPD19890AA9992E4D8
type: Similarity Annotation
comment: Belongs to the elongation factor P family.

PRO_1000117889
type: Chain Annotation
comment: Elongation factor P
mass: 20631
range: 18636005775848494tt1tt186

18636005775848494tt1
type: Position
type: ExactPosition
position: 1
reference: MISTNDLRPGIIVDLDGTLYLIVTAQHVKPGKGSAFVRVKMKKLSDGSTIEQTFRAGEKVQRAYLETKQMQYLYSDGEHFVFMDTDTYEQVTLSGDIMSDVQQWLKEGMMVNVQFYQGKAVGIEVPTFVELEVVETEPGVRGDTAQGGSKPAKLETGAVVQVPLFITEGDIIRVDTRTGEYVERVG

18636005775848494tt186
type: Position
type: ExactPosition
position: 186
reference: MISTNDLRPGIIVDLDGTLYLIVTAQHVKPGKGSAFVRVKMKKLSDGSTIEQTFRAGEKVQRAYLETKQMQYLYSDGEHFVFMDTDTYEQVTLSGDIMSDVQQWLKEGMMVNVQFYQGKAVGIEVPTFVELEVVETEPGVRGDTAQGGSKPAKLETGAVVQVPLFITEGDIIRVDTRTGEYVERVG

MISTNDLRPGIIVDLDGTLYLIVTAQHVKPGKGSAFVRVKMKKLSDGSTIEQTFRAGEKVQRAYLETKQMQYLYSDGEHFVFMDTDTYEQVTLSGDIMSDVQQWLKEGMMVNVQFYQGKAVGIEVPTFVELEVVETEPGVRGDTAQGGSKPAKLETGAVVQVPLFITEGDIIRVDTRTGEYVERVG
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 20631

http://purl.uniprot.org/uniprot/B5Y8M4#attribution-68AEDF1632F0BC61D700CEF2CC98DAC2
manual: true
evidence: ECO_0000255
source: MF_00141

B5Y8J0
type: Protein
reviewed: true
created: 2009-07-28
modified: 2023-02-22
version: 71
mnemonic: EFTS_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPFF0ED0AA27B8537C
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP164803175D840C37
annotation: SIPE908D4E891447989
annotation: SIPA105C892EAC0FC7B
annotation: PRO_1000189871
annotation: SIP7DB78A847A021042
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/251
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005737
classified with: GO_0003746
sequence: MEISASLVKQLRDETGAGFMECKKALEETGGDLEKAKLVLKEKGLARAEKKIGRAASQGLIHAYIHGEGKLGVLVEVNCETDFVARTDDFKELVHEIALQIAGMAPEYVAVEDVPEEVIEQEKEIYRKQAENEGKPAEIIDKIVEGKLQNFYKSKVLLEQPYVRDDSKTIKDLIKEKIALLGENIVVRRFVRWTLGE
proteome: Chromosome

B5Y8J0-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0264
type: Resource
database: eggNOG
comment: Bacteria

cd14275
type: Resource
database: CDD
comment: UBA_EF-Ts
signature sequence match: CDD cd14275 match 1

http://purl.uniprot.org/gene3d/1.10.8.10
type: Resource
database: Gene3D
comment: DNA helicase RuvA subunit, C-terminal domain
signature sequence match: Gene3D 1.10.8.10 match 1

http://purl.uniprot.org/gene3d/3.30.479.20
type: Resource
database: Gene3D
comment: Elongation factor Ts, dimerisation domain
signature sequence match: Gene3D 3.30.479.20 match 1

MF_00050
type: Resource
database: HAMAP
comment: EF_Ts
signature sequence match: HAMAP MF 00050 match 1

IPR036402
type: Resource
database: InterPro
comment: EF-Ts_dimer_sf

IPR001816
type: Resource
database: InterPro
comment: Transl_elong_EFTs/EF1B

IPR014039
type: Resource
database: InterPro
comment: Transl_elong_EFTs/EF1B_dimer

IPR018101
type: Resource
database: InterPro
comment: Transl_elong_Ts_CS

IPR009060
type: Resource
database: InterPro
comment: UBA-like_sf

PTHR11741
type: Resource
database: PANTHER
comment: ELONGATION FACTOR TS
signature sequence match: PANTHER PTHR11741 match 1

PTHR11741:SF0
type: Resource
database: PANTHER
comment: ELONGATION FACTOR TS, MITOCHONDRIAL
signature sequence match: PANTHER PTHR11741:SF0 match 1

PF00889
type: Resource
database: Pfam
comment: EF_TS
signature sequence match: Pfam PF00889 match 1

SSF54713
type: Resource
database: SUPFAM
comment: Elongation factor Ts (EF-Ts), dimerisation domain
signature sequence match: SUPFAM SSF54713 match 1

SSF46934
type: Resource
database: SUPFAM
comment: UBA-like
signature sequence match: SUPFAM SSF46934 match 1

TIGR00116
type: Resource
database: TIGRFAMs
comment: tsf
signature sequence match: TIGRFAMs TIGR00116 match 1

PS01126
type: Resource
database: PROSITE
comment: EF_TS_1
signature sequence match: PROSITE PS01126 match 1

PS01127
type: Resource
database: PROSITE
comment: EF_TS_2
signature sequence match: PROSITE PS01127 match 1

SIPFF0ED0AA27B8537C
type: Structured Name
full name: Elongation factor Ts
short name: EF-Ts

tsf
type: Gene
locus name: COPRO5265_0739

SIP164803175D840C37
type: Function Annotation
comment: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.

SIPA105C892EAC0FC7B
type: Similarity Annotation
comment: Belongs to the EF-Ts family.

PRO_1000189871
type: Chain Annotation
comment: Elongation factor Ts
mass: 22140
range: 18636005775650862tt1tt197

18636005775650862tt1
type: Position
type: ExactPosition
position: 1
reference: MEISASLVKQLRDETGAGFMECKKALEETGGDLEKAKLVLKEKGLARAEKKIGRAASQGLIHAYIHGEGKLGVLVEVNCETDFVARTDDFKELVHEIALQIAGMAPEYVAVEDVPEEVIEQEKEIYRKQAENEGKPAEIIDKIVEGKLQNFYKSKVLLEQPYVRDDSKTIKDLIKEKIALLGENIVVRRFVRWTLGE

18636005775650862tt197
type: Position
type: ExactPosition
position: 197
reference: MEISASLVKQLRDETGAGFMECKKALEETGGDLEKAKLVLKEKGLARAEKKIGRAASQGLIHAYIHGEGKLGVLVEVNCETDFVARTDDFKELVHEIALQIAGMAPEYVAVEDVPEEVIEQEKEIYRKQAENEGKPAEIIDKIVEGKLQNFYKSKVLLEQPYVRDDSKTIKDLIKEKIALLGENIVVRRFVRWTLGE

SIP7DB78A847A021042
type: Region Annotation
comment: Involved in Mg(2+) ion dislocation from EF-Tu
range: 18636005775650862tt81tt84

18636005775650862tt81
type: Position
type: ExactPosition
position: 81
reference: MEISASLVKQLRDETGAGFMECKKALEETGGDLEKAKLVLKEKGLARAEKKIGRAASQGLIHAYIHGEGKLGVLVEVNCETDFVARTDDFKELVHEIALQIAGMAPEYVAVEDVPEEVIEQEKEIYRKQAENEGKPAEIIDKIVEGKLQNFYKSKVLLEQPYVRDDSKTIKDLIKEKIALLGENIVVRRFVRWTLGE

18636005775650862tt84
type: Position
type: ExactPosition
position: 84
reference: MEISASLVKQLRDETGAGFMECKKALEETGGDLEKAKLVLKEKGLARAEKKIGRAASQGLIHAYIHGEGKLGVLVEVNCETDFVARTDDFKELVHEIALQIAGMAPEYVAVEDVPEEVIEQEKEIYRKQAENEGKPAEIIDKIVEGKLQNFYKSKVLLEQPYVRDDSKTIKDLIKEKIALLGENIVVRRFVRWTLGE

MEISASLVKQLRDETGAGFMECKKALEETGGDLEKAKLVLKEKGLARAEKKIGRAASQGLIHAYIHGEGKLGVLVEVNCETDFVARTDDFKELVHEIALQIAGMAPEYVAVEDVPEEVIEQEKEIYRKQAENEGKPAEIIDKIVEGKLQNFYKSKVLLEQPYVRDDSKTIKDLIKEKIALLGENIVVRRFVRWTLGE
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 22140

http://purl.uniprot.org/uniprot/B5Y8J0#attribution-7640461A89C5EECC81FABE53E97D5FB6
manual: true
evidence: ECO_0000255
source: MF_00050

B5Y7I0
type: Protein
reviewed: true
created: 2009-09-22
modified: 2023-02-22
version: 73
mnemonic: FMT_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPB847825D2C1252D7
enzyme: http://purl.uniprot.org/enzyme/2.1.2.9
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP11835F91CBD9AC37
annotation: SIPBDA4C5F2C52D0B17
annotation: SIP29D7E78EC839BEC8
annotation: PRO_1000203851
annotation: SIP4347DD2C8F97BDB0
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/648
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/808
classified with: GO_0004479
sequence: B5Y7I0-1
proteome: Chromosome

B5Y7I0-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0223
type: Resource
database: eggNOG
comment: Bacteria

cd08646
type: Resource
database: CDD
comment: FMT_core_Met-tRNA-FMT_N
signature sequence match: CDD cd08646 match 1

cd08704
type: Resource
database: CDD
comment: Met_tRNA_FMT_C
signature sequence match: CDD cd08704 match 1

MF_00182
type: Resource
database: HAMAP
comment: Formyl_trans
signature sequence match: HAMAP MF 00182 match 1

IPR005794
type: Resource
database: InterPro
comment: Fmt

IPR005793
type: Resource
database: InterPro
comment: Formyl_trans_C

IPR002376
type: Resource
database: InterPro
comment: Formyl_transf_N

IPR036477
type: Resource
database: InterPro
comment: Formyl_transf_N_sf

IPR011034
type: Resource
database: InterPro
comment: Formyl_transferase-like_C_sf

IPR044135
type: Resource
database: InterPro
comment: Met-tRNA-FMT_C

IPR041711
type: Resource
database: InterPro
comment: Met-tRNA-FMT_N

PTHR11138
type: Resource
database: PANTHER
comment: METHIONYL-TRNA FORMYLTRANSFERASE
signature sequence match: PANTHER PTHR11138 match 1

PTHR11138:SF5
type: Resource
database: PANTHER
comment: METHIONYL-TRNA FORMYLTRANSFERASE, MITOCHONDRIAL
signature sequence match: PANTHER PTHR11138:SF5 match 1

PF02911
type: Resource
database: Pfam
comment: Formyl_trans_C
signature sequence match: Pfam PF02911 match 1

PF00551
type: Resource
database: Pfam
comment: Formyl_trans_N
signature sequence match: Pfam PF00551 match 1

SSF50486
type: Resource
database: SUPFAM
comment: FMT C-terminal domain-like
signature sequence match: SUPFAM SSF50486 match 1

SSF53328
type: Resource
database: SUPFAM
comment: Formyltransferase
signature sequence match: SUPFAM SSF53328 match 1

SIPB847825D2C1252D7
type: Structured Name
full name: Methionyl-tRNA formyltransferase
ec name: 2.1.2.9

fmt
type: Gene
locus name: COPRO5265_0361

SIP11835F91CBD9AC37
type: Function Annotation
comment: Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus.

SIP29D7E78EC839BEC8
type: Similarity Annotation
comment: Belongs to the Fmt family.

PRO_1000203851
type: Chain Annotation
comment: Methionyl-tRNA formyltransferase
mass: 33894
range: 18636005758808110tt1tt304

18636005758808110tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y7I0-1

18636005758808110tt304
type: Position
type: ExactPosition
position: 304
reference: B5Y7I0-1

18636005758808110tt107
type: Position
type: ExactPosition
position: 107
reference: B5Y7I0-1

18636005758808110tt110
type: Position
type: ExactPosition
position: 110
reference: B5Y7I0-1

B5Y7I0-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 33894
value: MKIAFFSSGTFGLPVLEELKKENHEIVLITKVDAPSGRGLKLQPSPPAVVAEALQIPIVKVNSLKNDFIEWYFSQGFDVAIVVDFGFYIPKQLFQADKPVMVNIHPSLLPKYRGPNPIRRAICSGELETGVTLIKISEKMDEGDIYLQERVLIDPDDDYVSLTPKLQHVSMELLKKFFLELKQGNLRAFPQLGDPSYAPKFTPDELWIDWQKPAHDIQNQVRALADVGAKTTLGSKLVKIFKVRISGMEDSLPPGHYVAEKESLYVGTGQGSLEILSLQQEGRKKQDAASFVKGLREKEGVFGG

http://purl.uniprot.org/uniprot/B5Y7I0#attribution-7ADB9D678307BD581F4CF2062C7F6356
manual: true
evidence: ECO_0000255
source: MF_00182

B5Y9D1
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-05-03
version: 76
mnemonic: FOLD_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPB0E7861556C8069B
domain: SIP48F851C727976C5B
domain: SIP7FDA6903BF270483
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP5BB2538E093E01EA
annotation: SIP2819B719053C6543
annotation: SIP6A92D26DF11A9E8B
annotation: SIP11D2A95C645094B1
annotation: SIP9EC71527DA02ED0B
annotation: SIP6DCAD4A1B84CDC29
annotation: PRO_1000196757
annotation: SIP102CDA415D7848FB
annotation: SIPB6C8C1350685A6E0
annotation: SIPBA929361E7C9F235
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/368
classified with: http://purl.uniprot.org/keywords/378
classified with: http://purl.uniprot.org/keywords/486
classified with: http://purl.uniprot.org/keywords/511
classified with: http://purl.uniprot.org/keywords/521
classified with: http://purl.uniprot.org/keywords/554
classified with: http://purl.uniprot.org/keywords/560
classified with: http://purl.uniprot.org/keywords/658
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0004477
classified with: GO_0004488
classified with: GO_0000105
classified with: GO_0009086
classified with: GO_0006164
classified with: GO_0035999
sequence: B5Y9D1-1
proteome: Chromosome

B5Y9D1-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0190
type: Resource
database: eggNOG
comment: Bacteria

cd01080
type: Resource
database: CDD
comment: NAD_bind_m-THF_DH_Cyclohyd
signature sequence match: CDD cd01080 match 1

http://purl.uniprot.org/gene3d/3.40.50.10860
type: Resource
database: Gene3D
comment: Leucine Dehydrogenase, chain A, domain 1
signature sequence match: Gene3D 3.40.50.10860 match 1

http://purl.uniprot.org/gene3d/3.40.50.720
type: Resource
database: Gene3D
comment: NAD(P)-binding Rossmann-like Domain
signature sequence match: Gene3D 3.40.50.720 match 1

MF_01576
type: Resource
database: HAMAP
comment: THF_DHG_CYH
signature sequence match: HAMAP MF 01576 match 1

IPR046346
type: Resource
database: InterPro
comment: Aminoacid_DH-like_N_sf

IPR036291
type: Resource
database: InterPro
comment: NAD(P)-bd_dom_sf

IPR000672
type: Resource
database: InterPro
comment: THF_DH/CycHdrlase

IPR020630
type: Resource
database: InterPro
comment: THF_DH/CycHdrlase_cat_dom

IPR020631
type: Resource
database: InterPro
comment: THF_DH/CycHdrlase_NAD-bd_dom

PTHR48099:SF5
type: Resource
database: PANTHER
comment: C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC
signature sequence match: PANTHER PTHR48099:SF5 match 1

PTHR48099
type: Resource
database: PANTHER
comment: C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED
signature sequence match: PANTHER PTHR48099 match 1

PF00763
type: Resource
database: Pfam
comment: THF_DHG_CYH
signature sequence match: Pfam PF00763 match 1

PF02882
type: Resource
database: Pfam
comment: THF_DHG_CYH_C
signature sequence match: Pfam PF02882 match 1

PR00085
type: Resource
database: PRINTS
comment: THFDHDRGNASE

SSF53223
type: Resource
database: SUPFAM
comment: Aminoacid dehydrogenase-like, N-terminal domain
signature sequence match: SUPFAM SSF53223 match 1

SSF51735
type: Resource
database: SUPFAM
comment: NAD(P)-binding Rossmann-fold domains
signature sequence match: SUPFAM SSF51735 match 1

SIPB0E7861556C8069B
type: Structured Name
full name: Bifunctional protein FolD

SIP1DCE05B86FF5482A
type: Structured Name
full name: Methylenetetrahydrofolate dehydrogenase
ec name: 1.5.1.5

SIPC5E9CCE6F8486257
type: Structured Name
full name: Methenyltetrahydrofolate cyclohydrolase
ec name: 3.5.4.9

folD
type: Gene
locus name: COPRO5265_1066

SIP5BB2538E093E01EA
type: Function Annotation
comment: Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.

SIP9EC71527DA02ED0B
type: Subunit Annotation
comment: Homodimer.

SIP6DCAD4A1B84CDC29
type: Similarity Annotation
comment: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.

PRO_1000196757
type: Chain Annotation
comment: Bifunctional protein FolD
mass: 29456
range: 18636005792035118tt1tt273

18636005792035118tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y9D1-1

18636005792035118tt273
type: Position
type: ExactPosition
position: 273
reference: B5Y9D1-1

18636005792035118tt155
type: Position
type: ExactPosition
position: 155
reference: B5Y9D1-1

18636005792035118tt157
type: Position
type: ExactPosition
position: 157
reference: B5Y9D1-1

18636005792035118tt180
type: Position
type: ExactPosition
position: 180
reference: B5Y9D1-1

18636005792035118tt221
type: Position
type: ExactPosition
position: 221
reference: B5Y9D1-1

B5Y9D1-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 29456
value: MALIMKGKPVADAIYEELQPMTSLNLTLGIIKYKGSDAGGYLSGLSKAAQRLNVQLRVNEVEQFQELTQSVVVMGKDSQVHGILLLKPFPKEWNFRQASDLIPPEKDVDALHPVNLGKLAQGRGNLVPATPQAVLSILDFYNVLPLEGASALVIGRSEAVGLPAFLQLMQRNATVTVAHSRTKDLPSLSRQADLVVVAVGKPNFLTKDHVKEGAVVIDVGTNVLEDGKVVGDVDRENVEPLVRAITPVPGGVGSVTTACLFKNLFLCYQEQTR

http://purl.uniprot.org/uniprot/B5Y9D1#attribution-F069A5E3914EDBC44119710B6922B871
manual: true
evidence: ECO_0000255
source: MF_01576

B5Y6U9
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 74
mnemonic: GATB_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPC71EC75D25D6A970
enzyme: http://purl.uniprot.org/enzyme/6.3.5.-
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP24F47690C26811D8
annotation: SIP02377BDD90D448E5
annotation: SIPAC73F3B39BD2332E
annotation: SIP8D4CB88EF691F456
annotation: SIPB5A27B18C9EEC407
annotation: PRO_1000117617
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/436
classified with: http://purl.uniprot.org/keywords/648
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0050566
classified with: GO_0005524
classified with: GO_0050567
classified with: GO_0006412
sequence: B5Y6U9-1
proteome: Chromosome

B5Y6U9-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0064
type: Resource
database: eggNOG
comment: Bacteria

MF_00121
type: Resource
database: HAMAP
comment: GatB
signature sequence match: HAMAP MF 00121 match 1

IPR004413
type: Resource
database: InterPro
comment: Apn/Gln-ADT_bsu

IPR017959
type: Resource
database: InterPro
comment: Asn/Gln-tRNA_amidoTrfase_suB/E

IPR006075
type: Resource
database: InterPro
comment: Asn/Gln-tRNA_Trfase_suB/E_cat

IPR018027
type: Resource
database: InterPro
comment: Asn/Gln_amidotransferase

IPR003789
type: Resource
database: InterPro
comment: Asn/Gln_tRNA_amidoTrase-B-like

IPR023168
type: Resource
database: InterPro
comment: GatB_Yqey_C_2

IPR017958
type: Resource
database: InterPro
comment: Gln-tRNA_amidoTrfase_suB_CS

IPR014746
type: Resource
database: InterPro
comment: Gln_synth/guanido_kin_cat_dom

PTHR11659
type: Resource
database: PANTHER
comment: GLUTAMYL-TRNA GLN AMIDOTRANSFERASE SUBUNIT B MITOCHONDRIAL AND PROKARYOTIC PET112-RELATED
signature sequence match: PANTHER PTHR11659 match 1

PTHR11659:SF0
type: Resource
database: PANTHER
comment: GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT B, MITOCHONDRIAL
signature sequence match: PANTHER PTHR11659:SF0 match 1

PF02934
type: Resource
database: Pfam
comment: GatB_N
signature sequence match: Pfam PF02934 match 1

PF02637
type: Resource
database: Pfam
comment: GatB_Yqey
signature sequence match: Pfam PF02637 match 1

SM00845
type: Resource
database: SMART
comment: GatB_Yqey
signature sequence match: SMART SM00845 match 1

SSF89095
type: Resource
database: SUPFAM
comment: GatB/YqeY motif
signature sequence match: SUPFAM SSF89095 match 1

SSF55931
type: Resource
database: SUPFAM
comment: Glutamine synthetase/guanido kinase
signature sequence match: SUPFAM SSF55931 match 1

TIGR00133
type: Resource
database: TIGRFAMs
comment: gatB
signature sequence match: TIGRFAMs TIGR00133 match 1

PS01234
type: Resource
database: PROSITE
comment: GATB
signature sequence match: PROSITE PS01234 match 1

SIPC71EC75D25D6A970
type: Structured Name
full name: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
short name: Asp/Glu-ADT subunit B
ec name: 6.3.5.-

gatB
type: Gene
locus name: COPRO5265_0125

SIP24F47690C26811D8
type: Function Annotation
comment: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).

SIP8D4CB88EF691F456
type: Subunit Annotation
comment: Heterotrimer of A, B and C subunits.

SIPB5A27B18C9EEC407
type: Similarity Annotation
comment: Belongs to the GatB/GatE family. GatB subfamily.

PRO_1000117617
type: Chain Annotation
comment: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
mass: 53379
range: 18636005742819630tt1tt474

18636005742819630tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y6U9-1

18636005742819630tt474
type: Position
type: ExactPosition
position: 474
reference: B5Y6U9-1

B5Y6U9-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 53379
value: MNFKFVAGLEIHVQLNTKTKMFCSCPTEGPDIPNTRVCPVCLGYPGTLPVLNREAVVMAIALGKALHGHINNISRFHRKNYFYPDLPKGYQITQGDVPIIENAYLELSTGKKIPIKRIHLEEDAAKSVHVSSTGRLSGAEETLLDFNRSGIPLIEIVTDPVFESPEEAALFVEELQATLRYLGISNAQMELGQLRCDVNVSVELDGKEGTRVEIKNLNSIRAIRQALSYEYNRHVDAYKRGEIIPQETLAFDEKTNQTPPMRTKQTSEDYRYFPEPDLPPLVLTSDLFEEADKYSGSFLEAYKNALQWIGKESEARTLALNKDQYLMYATFAKEGFDTKLLTRIITIDLPNILSEVGKGWNEINQSYISAILNLQQRGEITAAVAKDLLWQAARDIDPIKYAQEHQLLGKKDLDLEQVISEVLEQNPDAVEKYKKGNVNVVSFLLGQVMKKTKGTADPGETRKLLEERLTKLSE

http://purl.uniprot.org/uniprot/B5Y6U9#attribution-566F024AB45254E6A93C8C84ADE6F906
manual: true
evidence: ECO_0000255
source: MF_00121

B5Y6R9
type: Protein
reviewed: true
created: 2009-09-22
modified: 2023-02-22
version: 68
mnemonic: GCH4_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPBF23C1F59B835ED8
enzyme: http://purl.uniprot.org/enzyme/3.5.4.16
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP0CAA63F461A24A0D
annotation: SIPDE2BA950F7490C3A
annotation: SIP3471448C27960783
annotation: SIPEEB4630C7A776D8E
annotation: PRO_1000215386
annotation: SIP33011052424B2B5B
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/378
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0003934
classified with: GO_0035998
sequence: B5Y6R9-1
proteome: Chromosome

B5Y6R9-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG1469
type: Resource
database: eggNOG
comment: Bacteria

http://purl.uniprot.org/gene3d/3.10.270.10
type: Resource
database: Gene3D
comment: Urate Oxidase
signature sequence match: Gene3D 3.10.270.10 match 1

MF 01527 B
type: Resource
database: HAMAP
comment: GTP_cyclohydrol_B
signature sequence match: HAMAP MF 01527 B match 1

IPR022838
type: Resource
database: InterPro
comment: GTP_cyclohydrolase_FolE2

IPR003801
type: Resource
database: InterPro
comment: GTP_cyclohydrolase_FolE2/MptA

PTHR36445:SF1
type: Resource
database: PANTHER
comment: GTP CYCLOHYDROLASE FOLE2
signature sequence match: PANTHER PTHR36445:SF1 match 1

PTHR36445
type: Resource
database: PANTHER
comment: GTP CYCLOHYDROLASE MPTA
signature sequence match: PANTHER PTHR36445 match 1

PF02649
type: Resource
database: Pfam
comment: GCHY-1
signature sequence match: Pfam PF02649 match 1

SIPBF23C1F59B835ED8
type: Structured Name
full name: GTP cyclohydrolase FolE2
ec name: 3.5.4.16

folE2
type: Gene
locus name: COPRO5265_0095

SIP0CAA63F461A24A0D
type: Function Annotation
comment: Converts GTP to 7,8-dihydroneopterin triphosphate.

SIPEEB4630C7A776D8E
type: Similarity Annotation
comment: Belongs to the GTP cyclohydrolase IV family.

PRO_1000215386
type: Chain Annotation
comment: GTP cyclohydrolase FolE2
mass: 30811
range: 18636005742623022tt1tt271

18636005742623022tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y6R9-1

18636005742623022tt271
type: Position
type: ExactPosition
position: 271
reference: B5Y6R9-1

SIP33011052424B2B5B
type: Site Annotation
comment: May be catalytically important
range: 18636005742623022tt146tt146

18636005742623022tt146
type: Position
type: ExactPosition
position: 146
reference: B5Y6R9-1

B5Y6R9-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 30811
value: MRDVQSERDPRNVPLDYVGIENVRLPITVRTKEGGKQPTVGTFSIGVDFPHSFRGTHMSRFMEVLYQHLEEISQTRLRVTLEDIKERLKATKAMIEVAFPFAIKKSTPVTKLETVMYVDASFKAELNSTRGYVVTSTVTVPVHSLCPCSRDISEFGAHNQRVDVTVSWQGDLWIEDVIALVESSASQPLYPLLKRPDEKYVTEKAYLNPKFVEDIAKDLFLKLDPLSPCFRIKVVSYESIHPHNAVAIKEKRAEVSESSVRSNDQEHRDCT

http://purl.uniprot.org/uniprot/B5Y6R9#attribution-80C26FB8A9676D752FC7A8FACE9541FF
manual: true
evidence: ECO_0000255
source: MF_01527

B5Y8S2
type: Protein
reviewed: true
created: 2009-03-24
modified: 2023-02-22
version: 73
mnemonic: GCSH_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPFA1C38416490BD6B
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP33664840350ABBCE
annotation: SIPDCD275F8B75A8202
annotation: SIPCDC21D98A70E5C9A
annotation: SIP1672B2655DF05F48
annotation: PRO_1000114513
annotation: SIPB84280D2B771EE53
annotation: SIPEB0EA12D62AE0A45
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/450
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005960
classified with: GO_0019464
sequence: MKVLEGLKYSKEHEWVKVLEDNKVSVGITDFAQDELGDIVFVNLPAVGQEIKVGETLASLESVKSASDVYSPVSGKVVEVNEKLKNSPEIINDDPYGEGWIAVIELSDVSVLDTLMSAEEYKQFIGE
proteome: Chromosome

B5Y8S2-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0509
type: Resource
database: eggNOG
comment: Bacteria

cd06848
type: Resource
database: CDD
comment: GCS_H
signature sequence match: CDD cd06848 match 1

MF_00272
type: Resource
database: HAMAP
comment: GcvH
signature sequence match: HAMAP MF 00272 match 1

IPR003016
type: Resource
database: InterPro
comment: 2-oxoA_DH_lipoyl-BS

IPR000089
type: Resource
database: InterPro
comment: Biotin_lipoyl

IPR002930
type: Resource
database: InterPro
comment: GCV_H

IPR033753
type: Resource
database: InterPro
comment: GCV_H/Fam206

IPR017453
type: Resource
database: InterPro
comment: GCV_H_sub

IPR011053
type: Resource
database: InterPro
comment: Single_hybrid_motif

PTHR11715
type: Resource
database: PANTHER
comment: GLYCINE CLEAVAGE SYSTEM H PROTEIN
signature sequence match: PANTHER PTHR11715 match 1

PTHR11715:SF3
type: Resource
database: PANTHER
comment: GLYCINE CLEAVAGE SYSTEM H PROTEIN, MITOCHONDRIAL
signature sequence match: PANTHER PTHR11715:SF3 match 1

PF01597
type: Resource
database: Pfam
comment: GCV_H
signature sequence match: Pfam PF01597 match 1

SSF51230
type: Resource
database: SUPFAM
comment: Single hybrid motif
signature sequence match: SUPFAM SSF51230 match 1

TIGR00527
type: Resource
database: TIGRFAMs
comment: gcvH
signature sequence match: TIGRFAMs TIGR00527 match 1

PS50968
type: Resource
database: PROSITE
comment: BIOTINYL_LIPOYL
signature sequence match: PROSITE PS50968 match 1

PS00189
type: Resource
database: PROSITE
comment: LIPOYL
signature sequence match: PROSITE PS00189 match 1

SIPFA1C38416490BD6B
type: Structured Name
full name: Glycine cleavage system H protein

gcvH
type: Gene
locus name: COPRO5265_0831

SIP33664840350ABBCE
type: Function Annotation
comment: The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.

SIPDCD275F8B75A8202
type: Cofactor Annotation
comment: Binds 1 lipoyl cofactor covalently.
cofactor: CHEBI_83088

SIPCDC21D98A70E5C9A
type: Subunit Annotation
comment: The glycine cleavage system is composed of four proteins: P, T, L and H.

SIP1672B2655DF05F48
type: Similarity Annotation
comment: Belongs to the GcvH family.

PRO_1000114513
type: Chain Annotation
comment: Glycine cleavage system H protein
mass: 13962
range: 18636005776241198tt1tt127

18636005776241198tt1
type: Position
type: ExactPosition
position: 1
reference: MKVLEGLKYSKEHEWVKVLEDNKVSVGITDFAQDELGDIVFVNLPAVGQEIKVGETLASLESVKSASDVYSPVSGKVVEVNEKLKNSPEIINDDPYGEGWIAVIELSDVSVLDTLMSAEEYKQFIGE

18636005776241198tt127
type: Position
type: ExactPosition
position: 127
reference: MKVLEGLKYSKEHEWVKVLEDNKVSVGITDFAQDELGDIVFVNLPAVGQEIKVGETLASLESVKSASDVYSPVSGKVVEVNEKLKNSPEIINDDPYGEGWIAVIELSDVSVLDTLMSAEEYKQFIGE

SIPB84280D2B771EE53
type: Domain Extent Annotation
comment: Lipoyl-binding
range: 18636005776241198tt23tt105

18636005776241198tt23
type: Position
type: ExactPosition
position: 23
reference: MKVLEGLKYSKEHEWVKVLEDNKVSVGITDFAQDELGDIVFVNLPAVGQEIKVGETLASLESVKSASDVYSPVSGKVVEVNEKLKNSPEIINDDPYGEGWIAVIELSDVSVLDTLMSAEEYKQFIGE

18636005776241198tt105
type: Position
type: ExactPosition
position: 105
reference: MKVLEGLKYSKEHEWVKVLEDNKVSVGITDFAQDELGDIVFVNLPAVGQEIKVGETLASLESVKSASDVYSPVSGKVVEVNEKLKNSPEIINDDPYGEGWIAVIELSDVSVLDTLMSAEEYKQFIGE

SIPEB0EA12D62AE0A45
type: Modified Residue Annotation
comment: N6-lipoyllysine
range: 18636005776241198tt64tt64

18636005776241198tt64
type: Position
type: ExactPosition
position: 64
reference: MKVLEGLKYSKEHEWVKVLEDNKVSVGITDFAQDELGDIVFVNLPAVGQEIKVGETLASLESVKSASDVYSPVSGKVVEVNEKLKNSPEIINDDPYGEGWIAVIELSDVSVLDTLMSAEEYKQFIGE

MKVLEGLKYSKEHEWVKVLEDNKVSVGITDFAQDELGDIVFVNLPAVGQEIKVGETLASLESVKSASDVYSPVSGKVVEVNEKLKNSPEIINDDPYGEGWIAVIELSDVSVLDTLMSAEEYKQFIGE
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 13962

http://purl.uniprot.org/uniprot/B5Y8S2#attribution-96D2525EE5104E89ECD908C519A05166
manual: true
evidence: ECO_0000255
source: MF_00272

http://purl.uniprot.org/uniprot/B5Y8S2#attribution-1ED4B45B3D175EC9DD3343E21F7F9C9E
manual: true
evidence: ECO_0000255
source: PRU01066

B5Y9D4
type: Protein
reviewed: true
created: 2009-07-28
modified: 2023-02-22
version: 78
mnemonic: GCSPA_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP6E8DF4B1D8DAD07B
alternative name: SIP96984E92573D98C7
alternative name: SIPC0549E375B29A43E
alternative name: SIPB9D16ABD37822A88
enzyme: http://purl.uniprot.org/enzyme/1.4.4.2
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP9FB14981B2327277
annotation: SIP94FFA8D6B4A0644D
annotation: SIP3DDFF90F585867A8
annotation: SIPB695D0A31C34DAAF
annotation: PRO_1000147981
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/560
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0004375
classified with: GO_0019464
classified with: GO_0009116
sequence: B5Y9D4-1
proteome: Chromosome

B5Y9D4-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0403
type: Resource
database: eggNOG
comment: Bacteria

cd00613
type: Resource
database: CDD
comment: GDC-P
signature sequence match: CDD cd00613 match 1

MF_00712
type: Resource
database: HAMAP
comment: GcvPA
signature sequence match: HAMAP MF 00712 match 1

IPR023010
type: Resource
database: InterPro
comment: GcvPA

IPR020581
type: Resource
database: InterPro
comment: GDC_P

PTHR42806
type: Resource
database: PANTHER
comment: GLYCINE CLEAVAGE SYSTEM P-PROTEIN
signature sequence match: PANTHER PTHR42806 match 1

PTHR42806:SF1
type: Resource
database: PANTHER
comment: GLYCINE DEHYDROGENASE (DECARBOXYLATING)
signature sequence match: PANTHER PTHR42806:SF1 match 1

PF02347
type: Resource
database: Pfam
comment: GDC-P
signature sequence match: Pfam PF02347 match 1

PIRSF006815
type: Resource
database: PIRSF
comment: GcvPA
signature sequence match: PIRSF PIRSF006815 match 1

SIP6E8DF4B1D8DAD07B
type: Structured Name
full name: Probable glycine dehydrogenase (decarboxylating) subunit 1
ec name: 1.4.4.2

SIP96984E92573D98C7
type: Structured Name
full name: Glycine cleavage system P-protein subunit 1

SIPC0549E375B29A43E
type: Structured Name
full name: Glycine decarboxylase subunit 1

SIPB9D16ABD37822A88
type: Structured Name
full name: Glycine dehydrogenase (aminomethyl-transferring) subunit 1

gcvPA
type: Gene
locus name: COPRO5265_1070

SIP9FB14981B2327277
type: Function Annotation
comment: The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.

SIP3DDFF90F585867A8
type: Subunit Annotation
comment: The glycine cleavage system is composed of four proteins: P, T, L and H. In this organism, the P 'protein' is a heterodimer of two subunits.

SIPB695D0A31C34DAAF
type: Similarity Annotation
comment: Belongs to the GcvP family. N-terminal subunit subfamily.

PRO_1000147981
type: Chain Annotation
comment: Probable glycine dehydrogenase (decarboxylating) subunit 1
mass: 48463
range: 18636005792035886tt1tt435

18636005792035886tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y9D4-1

18636005792035886tt435
type: Position
type: ExactPosition
position: 435
reference: B5Y9D4-1

B5Y9D4-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 48463
value: MRYVPHTKEEIKAMLEAVGLRNVDELFSDIPTEALLKRHLQVEGGWDEEQLRAYFRKAASSIPDANSAVYFLGGGVYDHYVPSAVDKIIALPEFYTAYTPYQAEISQGTLQAMFEYQSLICELTGMEVANGSLYDGASAVAEAVLMAMRINGKRRVLVSECVHPDIIEVLRTYQLGQDFEILTLPQKEGVTDLSELEDLSNVSCLVMQNPNYYGFLENMNQASELIHKAGGLFVAAVDPLSLGVLKSPHEYGADVVVGEGQSLGNHMSYGGPHFGFFATKMDYIRYMPGRMAGQTVDVDGRVGYVLTLQTREQHIRREKATSNITSNHWLMALASAVYLSLMGGSLPELGQTILNRSTYLAQKLASVGYPLWQRQYFFKEFPIKARDAEAVQEALADSGYYVGPVIDEHTLLVAVTEKRTKEHMDKLIELMEGLR

http://purl.uniprot.org/uniprot/B5Y9D4#attribution-C32BE40E5FA5C5466406C07152090EB6
manual: true
evidence: ECO_0000255
source: MF_00712

B5Y8G6
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 77
mnemonic: GLYA_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPA8BEDF791B077162
enzyme: http://purl.uniprot.org/enzyme/2.1.2.1
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPFA227146EF6A487E
annotation: SIPB98AA6E0CBB31E3B
annotation: SIP3B60751F4DF0BFDF
annotation: SIP124ACA975CAF1480
annotation: SIP664472614340F4E9
annotation: SIPAC486F54DDFB00F8
annotation: SIPF936E3467893DD39
annotation: SIP8C248910B6073F4C
annotation: PRO_1000116823
annotation: SIP223A761DEDEBA9A0
annotation: SIP3F613CA41A817F0C
annotation: SIPD79AFCF7032310B8
annotation: SIP40EF4C4DD54D2A81
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/28
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/554
classified with: http://purl.uniprot.org/keywords/663
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/808
classified with: GO_0005737
classified with: GO_0004372
classified with: GO_0030170
classified with: GO_0019264
classified with: GO_0035999
sequence: B5Y8G6-1
proteome: Chromosome

B5Y8G6-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0112
type: Resource
database: eggNOG
comment: Bacteria

cd00378
type: Resource
database: CDD
comment: SHMT
signature sequence match: CDD cd00378 match 1

MF_00051
type: Resource
database: HAMAP
comment: SHMT
signature sequence match: HAMAP MF 00051 match 1

IPR001085
type: Resource
database: InterPro
comment: Ser_HO-MeTrfase

IPR019798
type: Resource
database: InterPro
comment: Ser_HO-MeTrfase_PLP_BS

IPR039429
type: Resource
database: InterPro
comment: SHMT-like_dom

PTHR11680
type: Resource
database: PANTHER
comment: SERINE HYDROXYMETHYLTRANSFERASE
signature sequence match: PANTHER PTHR11680 match 1

PTHR11680:SF28
type: Resource
database: PANTHER
comment: SERINE HYDROXYMETHYLTRANSFERASE, MITOCHONDRIAL
signature sequence match: PANTHER PTHR11680:SF28 match 1

PF00464
type: Resource
database: Pfam
comment: SHMT
signature sequence match: Pfam PF00464 match 1

PIRSF000412
type: Resource
database: PIRSF
comment: SHMT
signature sequence match: PIRSF PIRSF000412 match 1

PS00096
type: Resource
database: PROSITE
comment: SHMT
signature sequence match: PROSITE PS00096 match 1

SIPA8BEDF791B077162
type: Structured Name
full name: Serine hydroxymethyltransferase
short name: SHMT
short name: Serine methylase
ec name: 2.1.2.1

glyA
type: Gene
locus name: COPRO5265_0715

SIPFA227146EF6A487E
type: Function Annotation
comment: Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.

SIPAC486F54DDFB00F8
type: Subunit Annotation
comment: Homodimer.

SIP8C248910B6073F4C
type: Similarity Annotation
comment: Belongs to the SHMT family.

PRO_1000116823
type: Chain Annotation
comment: Serine hydroxymethyltransferase
mass: 45078
range: 18636005775455790tt1tt415

18636005775455790tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y8G6-1

18636005775455790tt415
type: Position
type: ExactPosition
position: 415
reference: B5Y8G6-1

18636005775455790tt119
type: Position
type: ExactPosition
position: 119
reference: B5Y8G6-1

18636005775455790tt123
type: Position
type: ExactPosition
position: 123
reference: B5Y8G6-1

18636005775455790tt125
type: Position
type: ExactPosition
position: 125
reference: B5Y8G6-1

SIPD79AFCF7032310B8
type: Site Annotation
comment: Plays an important role in substrate specificity
range: 18636005775455790tt227tt227

18636005775455790tt227
type: Position
type: ExactPosition
position: 227
reference: B5Y8G6-1

SIP40EF4C4DD54D2A81
type: Modified Residue Annotation
comment: N6-(pyridoxal phosphate)lysine
range: 18636005775455790tt228tt228

18636005775455790tt228
type: Position
type: ExactPosition
position: 228
reference: B5Y8G6-1

B5Y8G6-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 45078
value: MRYDHIEEGDPEIFELMRRESLRQNRTLDLIASENLASEAVLEATGSIFTNKYAEGYPNARYYGGCEVADQVEILAIERAKKLFDADHANVQPHSGSQANQAVYLAFLKPGDTILSMSLAAGGHLSHGAPVSMTGKWFNIVHYGVDPKTETIDLNEVEKLALEHKPKLIIAGASAYPRFIDFQGFREIADKVGAIFMVDMAHIAGLVAAGVHPSPVPFADVVTTTTHKTLRGPRGGLILCKAEHAKAIDKAVFPGVQGGPLVHIIAAKAVAFKEDSEPSFKEYSAQVVKNAKTMAETFASKGVRVVTGGTDNHLMLLDVTSVGLTGKEAEELLAEVGIVVNKNAIPFDKLPPRVASGIRIGTPNITTRGLRDEECKLLAEQMSELFITKSEKVKAEIKGLVQELTERYPAYKGWS

http://purl.uniprot.org/uniprot/B5Y8G6#attribution-3599E19C8BC546E40420244F25405B1D
manual: true
evidence: ECO_0000255
source: MF_00051

B5Y7Q7
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 77
mnemonic: GPMA_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP39A413895F350920
enzyme: http://purl.uniprot.org/enzyme/5.4.2.11
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPAEFF9BBBF1D3CBB5
annotation: SIP46C70DF4B7C82159
annotation: SIP7A1DDCAC5521B444
annotation: SIP2ED88246DDC4A398
annotation: PRO_1000135938
annotation: SIPB016FCCFEF0E6E8F
annotation: SIP3C5182CA16553928
annotation: SIPBDB013A1F93D88FD
annotation: SIPE2620D126BE884E8
annotation: SIP87DA1EF1310785AD
annotation: SIP1BF1EF3AC5D2FC54
annotation: SIP32F77D9F9FA81A94
annotation: SIP34F484AB92F22BCD
annotation: SIP1970B31CE69F028B
annotation: SIPD4E820DC82365371
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/312
classified with: http://purl.uniprot.org/keywords/324
classified with: http://purl.uniprot.org/keywords/413
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0046538
classified with: GO_0006094
classified with: GO_0006096
sequence: B5Y7Q7-1
proteome: Chromosome

B5Y7Q7-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0588
type: Resource
database: eggNOG
comment: Bacteria

cd07067
type: Resource
database: CDD
comment: HP_PGM_like
signature sequence match: CDD cd07067 match 1

http://purl.uniprot.org/gene3d/3.40.50.1240
type: Resource
database: Gene3D
comment: Phosphoglycerate mutase-like
signature sequence match: Gene3D 3.40.50.1240 match 1

MF_01039
type: Resource
database: HAMAP
comment: PGAM_GpmA
signature sequence match: HAMAP MF 01039 match 1

IPR013078
type: Resource
database: InterPro
comment: His_Pase_superF_clade-1

IPR029033
type: Resource
database: InterPro
comment: His_PPase_superfam

IPR001345
type: Resource
database: InterPro
comment: PG/BPGM_mutase_AS

IPR005952
type: Resource
database: InterPro
comment: Phosphogly_mut1

PTHR11931
type: Resource
database: PANTHER
comment: PHOSPHOGLYCERATE MUTASE
signature sequence match: PANTHER PTHR11931 match 1

PTHR11931:SF0
type: Resource
database: PANTHER
comment: PHOSPHOGLYCERATE MUTASE
signature sequence match: PANTHER PTHR11931:SF0 match 1

PF00300
type: Resource
database: Pfam
comment: His_Phos_1
signature sequence match: Pfam PF00300 match 1

PIRSF000709
type: Resource
database: PIRSF
comment: 6PFK_2-Ptase
signature sequence match: PIRSF PIRSF000709 match 1

SM00855
type: Resource
database: SMART
comment: PGAM
signature sequence match: SMART SM00855 match 1

SSF53254
type: Resource
database: SUPFAM
comment: Phosphoglycerate mutase-like
signature sequence match: SUPFAM SSF53254 match 1

TIGR01258
type: Resource
database: TIGRFAMs
comment: pgm_1
signature sequence match: TIGRFAMs TIGR01258 match 1

PS00175
type: Resource
database: PROSITE
comment: PG_MUTASE
signature sequence match: PROSITE PS00175 match 1

SIP39A413895F350920
type: Structured Name
full name: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
short name: BPG-dependent PGAM
short name: PGAM
short name: Phosphoglyceromutase
short name: dPGM
ec name: 5.4.2.11

gpmA
type: Gene
locus name: COPRO5265_0439

SIPAEFF9BBBF1D3CBB5
type: Function Annotation
comment: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.

SIP2ED88246DDC4A398
type: Similarity Annotation
comment: Belongs to the phosphoglycerate mutase family. BPG-dependent PGAM subfamily.

PRO_1000135938
type: Chain Annotation
comment: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
mass: 28884
range: 18636005759334190tt1tt248

18636005759334190tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y7Q7-1

18636005759334190tt248
type: Position
type: ExactPosition
position: 248
reference: B5Y7Q7-1

SIPB016FCCFEF0E6E8F
type: Active Site Annotation
comment: Tele-phosphohistidine intermediate
range: 18636005759334190tt9tt9

18636005759334190tt9
type: Position
type: ExactPosition
position: 9
reference: B5Y7Q7-1

SIP3C5182CA16553928
type: Active Site Annotation
comment: Proton donor/acceptor
range: 18636005759334190tt87tt87

18636005759334190tt87
type: Position
type: ExactPosition
position: 87
reference: B5Y7Q7-1

18636005759334190tt8
type: Position
type: ExactPosition
position: 8
reference: B5Y7Q7-1

18636005759334190tt15
type: Position
type: ExactPosition
position: 15
reference: B5Y7Q7-1

18636005759334190tt21
type: Position
type: ExactPosition
position: 21
reference: B5Y7Q7-1

18636005759334190tt22
type: Position
type: ExactPosition
position: 22
reference: B5Y7Q7-1

18636005759334190tt60
type: Position
type: ExactPosition
position: 60
reference: B5Y7Q7-1

18636005759334190tt90
type: Position
type: ExactPosition
position: 90
reference: B5Y7Q7-1

18636005759334190tt98
type: Position
type: ExactPosition
position: 98
reference: B5Y7Q7-1

18636005759334190tt114
type: Position
type: ExactPosition
position: 114
reference: B5Y7Q7-1

18636005759334190tt115
type: Position
type: ExactPosition
position: 115
reference: B5Y7Q7-1

18636005759334190tt183
type: Position
type: ExactPosition
position: 183
reference: B5Y7Q7-1

18636005759334190tt184
type: Position
type: ExactPosition
position: 184
reference: B5Y7Q7-1

SIPD4E820DC82365371
type: Site Annotation
comment: Transition state stabilizer
range: 18636005759334190tt182tt182

18636005759334190tt182
type: Position
type: ExactPosition
position: 182
reference: B5Y7Q7-1

substrate

B5Y7Q7-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 28884
value: MYKVVMIRHGESEWNKLNLFTGWTDVDLSDRGVEEAIWAGKKLKEEGYTFDVAFTSVLKRAIKTLNLVLEQMNLDWIPVYKHWRLNERHYGALQGLNKAEMTERYGEQQVLLWRRSYDVPPPPLEKTDPRWPGNDPRYALVPEDELPLCESLKDTEARVVPYWADMIVPAIKEGKKVLISAHGNSMRAIVKYLDKMSGEEIAKTNIPTGIPLVYELDESMRPIRHYYLADEDFLKAKEQEVANQIYKK

http://purl.uniprot.org/uniprot/B5Y7Q7#attribution-CA3D0BCA15D30F5CA801DC550226CAFB
manual: true
evidence: ECO_0000255
source: MF_01039

B5Y9H0
type: Protein
reviewed: true
created: 2009-07-28
modified: 2023-05-03
version: 69
mnemonic: GRPE_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP3B7139FA524DD3EB
alternative name: SIP346BF82BEFF0C0A5
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPE020AB77254EFBAD
annotation: SIP226363EF7975FD35
annotation: SIPFE9200984A7B5F03
annotation: SIPD1955CE0C734FF38
annotation: PRO_1000164185
annotation: SIP4366859928F256B9
annotation: SIPADD05EA16B159741
annotation: SIPFB326F36CBE15061
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/143
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/346
classified with: GO_0005737
classified with: GO_0000774
classified with: GO_0042803
classified with: GO_0051087
classified with: GO_0006457
sequence: B5Y9H0-1
proteome: Chromosome

B5Y9H0-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0576
type: Resource
database: eggNOG
comment: Bacteria

cd00446
type: Resource
database: CDD
comment: GrpE
signature sequence match: CDD cd00446 match 1

http://purl.uniprot.org/gene3d/2.30.22.10
type: Resource
database: Gene3D
comment: Head domain of nucleotide exchange factor GrpE
signature sequence match: Gene3D 2.30.22.10 match 1

MF_01151
type: Resource
database: HAMAP
comment: GrpE
signature sequence match: HAMAP MF 01151 match 1

IPR000740
type: Resource
database: InterPro
comment: GrpE

IPR013805
type: Resource
database: InterPro
comment: GrpE_coiled_coil

IPR009012
type: Resource
database: InterPro
comment: GrpE_head

PTHR21237
type: Resource
database: PANTHER
comment: GRPE PROTEIN
signature sequence match: PANTHER PTHR21237 match 1

PTHR21237:SF23
type: Resource
database: PANTHER
comment: GRPE PROTEIN HOMOLOG, MITOCHONDRIAL
signature sequence match: PANTHER PTHR21237:SF23 match 1

PF01025
type: Resource
database: Pfam
comment: GrpE
signature sequence match: Pfam PF01025 match 1

PR00773
type: Resource
database: PRINTS
comment: GRPEPROTEIN

SSF58014
type: Resource
database: SUPFAM
comment: Coiled-coil domain of nucleotide exchange factor GrpE
signature sequence match: SUPFAM SSF58014 match 1

SSF51064
type: Resource
database: SUPFAM
comment: Head domain of nucleotide exchange factor GrpE
signature sequence match: SUPFAM SSF51064 match 1

SIP3B7139FA524DD3EB
type: Structured Name
full name: Protein GrpE

SIP346BF82BEFF0C0A5
type: Structured Name
full name: HSP-70 cofactor

grpE
type: Gene
locus name: COPRO5265_1107

SIPE020AB77254EFBAD
type: Function Annotation
comment: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding.

SIP226363EF7975FD35
type: Subunit Annotation
comment: Homodimer.

SIPD1955CE0C734FF38
type: Similarity Annotation
comment: Belongs to the GrpE family.

PRO_1000164185
type: Chain Annotation
comment: Protein GrpE
mass: 25963
range: 18636005792297006tt1tt228

18636005792297006tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y9H0-1

18636005792297006tt228
type: Position
type: ExactPosition
position: 228
reference: B5Y9H0-1

SIP4366859928F256B9
type: Region Annotation
comment: Disordered
range: 18636005792297006tt1tt71

18636005792297006tt71
type: Position
type: ExactPosition
position: 71
reference: B5Y9H0-1

SIPADD05EA16B159741
type: Compositional Bias Annotation
comment: Basic and acidic residues
range: 18636005792297006tt1tt17

18636005792297006tt17
type: Position
type: ExactPosition
position: 17
reference: B5Y9H0-1

SIPFB326F36CBE15061
type: Compositional Bias Annotation
comment: Polar residues
range: 18636005792297006tt18tt71

18636005792297006tt18
type: Position
type: ExactPosition
position: 18
reference: B5Y9H0-1

B5Y9H0-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 25963
value: MDDKQKTNEEVKASSFDSEKSSKNQAFENTEEPAEGFQNVQHDNGSNPAQKQNSEAKEASKDQTNTNNNELSKKLEQLETERLTLQEKIAVLEQQHRELEEFLLKMKHEFALAKEALKRDQEKKERLLAESMARDLFPILDTLDHALEHDGENNGLRLIRSQLVSVLEKYGVVEVGKEGEVFDPNWHEFLGYAEGPENKIIKVVRKGYKIGDTLLRPALVVIGKESSC

http://purl.uniprot.org/uniprot/B5Y9H0#attribution-496B297D0272041F3344CB5250410041
manual: true
evidence: ECO_0000255
source: MF_01151

B5Y8S5
type: Protein
reviewed: true
created: 2009-03-24
modified: 2023-05-03
version: 66
mnemonic: KITH_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPD1DF257F6D6FFF64
enzyme: http://purl.uniprot.org/enzyme/2.7.1.21
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPEDBDE17850C7E765
annotation: SIPB5557590507AD69F
annotation: SIP77D0262B550B74BF
annotation: SIP1212B37A36787445
annotation: PRO_1000095431
annotation: SIP82BBBE373A90B347
annotation: SIP38A9DA2A046E45F4
annotation: SIPBAE636A0AA8AF0C5
annotation: SIP9B72310A62BC21C0
annotation: SIP9E9C5E7DC3ABB8DF
annotation: SIP8AE4D760F348BEF5
annotation: SIP8FB77966625538D7
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/237
classified with: http://purl.uniprot.org/keywords/418
classified with: http://purl.uniprot.org/keywords/479
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/862
classified with: GO_0005737
classified with: GO_0005524
classified with: GO_0004797
classified with: GO_0008270
classified with: GO_0071897
classified with: GO_0016310
sequence: MEIITQDGWLEVITGCMFSGKTEELVRRLRRAVIAKKETIAIKPALDTRYDLVAVVSHSGFSFNAIPVEDPKSILGMAKDAEVVGIDEAQFFTGELVPVIRELLQNKKRVIVAGLDLDFRGEPFGIMPTLLALADEVTKLHAICSVCGNIATKTQRLINGRPARYDDPTILVGGLETYEARCNLHHEVPGKTLTLFKE
proteome: Chromosome

B5Y8S5-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG1435
type: Resource
database: eggNOG
comment: Bacteria

MF_00124
type: Resource
database: HAMAP
comment: Thymidine_kinase
signature sequence match: HAMAP MF 00124 match 1

IPR001267
type: Resource
database: InterPro
comment: Thymidine_kinase

IPR020633
type: Resource
database: InterPro
comment: Thymidine_kinase_CS

PTHR11441
type: Resource
database: PANTHER
comment: THYMIDINE KINASE
signature sequence match: PANTHER PTHR11441 match 1

PTHR11441:SF0
type: Resource
database: PANTHER
comment: THYMIDINE KINASE, CYTOSOLIC
signature sequence match: PANTHER PTHR11441:SF0 match 1

PF00265
type: Resource
database: Pfam
comment: TK
signature sequence match: Pfam PF00265 match 1

PIRSF035805
type: Resource
database: PIRSF
comment: TK_cell
signature sequence match: PIRSF PIRSF035805 match 1

SSF57716
type: Resource
database: SUPFAM
comment: Glucocorticoid receptor-like (DNA-binding domain)
signature sequence match: SUPFAM SSF57716 match 1

PS00603
type: Resource
database: PROSITE
comment: TK_CELLULAR_TYPE
signature sequence match: PROSITE PS00603 match 1

SIPD1DF257F6D6FFF64
type: Structured Name
full name: Thymidine kinase
ec name: 2.7.1.21

tdk
type: Gene
locus name: COPRO5265_0834

SIPB5557590507AD69F
type: Subunit Annotation
comment: Homotetramer.

SIP1212B37A36787445
type: Similarity Annotation
comment: Belongs to the thymidine kinase family.

PRO_1000095431
type: Chain Annotation
comment: Thymidine kinase
mass: 21861
range: 18636005776241966tt1tt198

18636005776241966tt1
type: Position
type: ExactPosition
position: 1
reference: MEIITQDGWLEVITGCMFSGKTEELVRRLRRAVIAKKETIAIKPALDTRYDLVAVVSHSGFSFNAIPVEDPKSILGMAKDAEVVGIDEAQFFTGELVPVIRELLQNKKRVIVAGLDLDFRGEPFGIMPTLLALADEVTKLHAICSVCGNIATKTQRLINGRPARYDDPTILVGGLETYEARCNLHHEVPGKTLTLFKE

18636005776241966tt198
type: Position
type: ExactPosition
position: 198
reference: MEIITQDGWLEVITGCMFSGKTEELVRRLRRAVIAKKETIAIKPALDTRYDLVAVVSHSGFSFNAIPVEDPKSILGMAKDAEVVGIDEAQFFTGELVPVIRELLQNKKRVIVAGLDLDFRGEPFGIMPTLLALADEVTKLHAICSVCGNIATKTQRLINGRPARYDDPTILVGGLETYEARCNLHHEVPGKTLTLFKE

SIP82BBBE373A90B347
type: Active Site Annotation
comment: Proton acceptor
range: 18636005776241966tt88tt88

18636005776241966tt88
type: Position
type: ExactPosition
position: 88
reference: MEIITQDGWLEVITGCMFSGKTEELVRRLRRAVIAKKETIAIKPALDTRYDLVAVVSHSGFSFNAIPVEDPKSILGMAKDAEVVGIDEAQFFTGELVPVIRELLQNKKRVIVAGLDLDFRGEPFGIMPTLLALADEVTKLHAICSVCGNIATKTQRLINGRPARYDDPTILVGGLETYEARCNLHHEVPGKTLTLFKE

18636005776241966tt15
type: Position
type: ExactPosition
position: 15
reference: MEIITQDGWLEVITGCMFSGKTEELVRRLRRAVIAKKETIAIKPALDTRYDLVAVVSHSGFSFNAIPVEDPKSILGMAKDAEVVGIDEAQFFTGELVPVIRELLQNKKRVIVAGLDLDFRGEPFGIMPTLLALADEVTKLHAICSVCGNIATKTQRLINGRPARYDDPTILVGGLETYEARCNLHHEVPGKTLTLFKE

18636005776241966tt22
type: Position
type: ExactPosition
position: 22
reference: MEIITQDGWLEVITGCMFSGKTEELVRRLRRAVIAKKETIAIKPALDTRYDLVAVVSHSGFSFNAIPVEDPKSILGMAKDAEVVGIDEAQFFTGELVPVIRELLQNKKRVIVAGLDLDFRGEPFGIMPTLLALADEVTKLHAICSVCGNIATKTQRLINGRPARYDDPTILVGGLETYEARCNLHHEVPGKTLTLFKE

18636005776241966tt87
type: Position
type: ExactPosition
position: 87
reference: MEIITQDGWLEVITGCMFSGKTEELVRRLRRAVIAKKETIAIKPALDTRYDLVAVVSHSGFSFNAIPVEDPKSILGMAKDAEVVGIDEAQFFTGELVPVIRELLQNKKRVIVAGLDLDFRGEPFGIMPTLLALADEVTKLHAICSVCGNIATKTQRLINGRPARYDDPTILVGGLETYEARCNLHHEVPGKTLTLFKE

18636005776241966tt90
type: Position
type: ExactPosition
position: 90
reference: MEIITQDGWLEVITGCMFSGKTEELVRRLRRAVIAKKETIAIKPALDTRYDLVAVVSHSGFSFNAIPVEDPKSILGMAKDAEVVGIDEAQFFTGELVPVIRELLQNKKRVIVAGLDLDFRGEPFGIMPTLLALADEVTKLHAICSVCGNIATKTQRLINGRPARYDDPTILVGGLETYEARCNLHHEVPGKTLTLFKE

18636005776241966tt144
type: Position
type: ExactPosition
position: 144
reference: MEIITQDGWLEVITGCMFSGKTEELVRRLRRAVIAKKETIAIKPALDTRYDLVAVVSHSGFSFNAIPVEDPKSILGMAKDAEVVGIDEAQFFTGELVPVIRELLQNKKRVIVAGLDLDFRGEPFGIMPTLLALADEVTKLHAICSVCGNIATKTQRLINGRPARYDDPTILVGGLETYEARCNLHHEVPGKTLTLFKE

18636005776241966tt147
type: Position
type: ExactPosition
position: 147
reference: MEIITQDGWLEVITGCMFSGKTEELVRRLRRAVIAKKETIAIKPALDTRYDLVAVVSHSGFSFNAIPVEDPKSILGMAKDAEVVGIDEAQFFTGELVPVIRELLQNKKRVIVAGLDLDFRGEPFGIMPTLLALADEVTKLHAICSVCGNIATKTQRLINGRPARYDDPTILVGGLETYEARCNLHHEVPGKTLTLFKE

18636005776241966tt182
type: Position
type: ExactPosition
position: 182
reference: MEIITQDGWLEVITGCMFSGKTEELVRRLRRAVIAKKETIAIKPALDTRYDLVAVVSHSGFSFNAIPVEDPKSILGMAKDAEVVGIDEAQFFTGELVPVIRELLQNKKRVIVAGLDLDFRGEPFGIMPTLLALADEVTKLHAICSVCGNIATKTQRLINGRPARYDDPTILVGGLETYEARCNLHHEVPGKTLTLFKE

18636005776241966tt185
type: Position
type: ExactPosition
position: 185
reference: MEIITQDGWLEVITGCMFSGKTEELVRRLRRAVIAKKETIAIKPALDTRYDLVAVVSHSGFSFNAIPVEDPKSILGMAKDAEVVGIDEAQFFTGELVPVIRELLQNKKRVIVAGLDLDFRGEPFGIMPTLLALADEVTKLHAICSVCGNIATKTQRLINGRPARYDDPTILVGGLETYEARCNLHHEVPGKTLTLFKE

MEIITQDGWLEVITGCMFSGKTEELVRRLRRAVIAKKETIAIKPALDTRYDLVAVVSHSGFSFNAIPVEDPKSILGMAKDAEVVGIDEAQFFTGELVPVIRELLQNKKRVIVAGLDLDFRGEPFGIMPTLLALADEVTKLHAICSVCGNIATKTQRLINGRPARYDDPTILVGGLETYEARCNLHHEVPGKTLTLFKE
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 21861

http://purl.uniprot.org/uniprot/B5Y8S5#attribution-42B98F4A280C1336EE08D7CDEE33E553
manual: true
evidence: ECO_0000255
source: MF_00124

B5Y7S6
type: Protein
reviewed: true
created: 2009-03-24
modified: 2023-05-03
version: 71
mnemonic: KTHY_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPDDF2DBC7F9F615ED
alternative name: SIP4D3B11F3CE4CE29B
enzyme: http://purl.uniprot.org/enzyme/2.7.4.9
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPAC26F9F7BD7C14CE
annotation: SIP32942E2B28420E20
annotation: SIP476907AF8F67A95E
annotation: PRO_1000097388
annotation: SIP841E013DB72C6683
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/418
classified with: http://purl.uniprot.org/keywords/545
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005524
classified with: GO_0004798
classified with: GO_0006233
classified with: GO_0006235
classified with: GO_0016310
sequence: MFIVVEGIDGCGKSTVASLLAAEIGKKRPVFHTFEPGHVRDGLYRELIMENVDNPFVVAALFTIDRAEHVKKMIKPALAKGEWVVCERYADSTLAYQGYGMGLDKELINRMNEEAIDGLWPDKIFYLDIEPHLALARLQNKEKDALEGQGLEFLQRVREGYEEIARTRGYIYMDATLPPEIIVKRILEEVKLQ
proteome: Chromosome

B5Y7S6-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0125
type: Resource
database: eggNOG
comment: Bacteria

cd01672
type: Resource
database: CDD
comment: TMPK
signature sequence match: CDD cd01672 match 1

MF_00165
type: Resource
database: HAMAP
comment: Thymidylate_kinase
signature sequence match: HAMAP MF 00165 match 1

IPR039430
type: Resource
database: InterPro
comment: Thymidylate_kin-like_dom

IPR018095
type: Resource
database: InterPro
comment: Thymidylate_kin_CS

IPR018094
type: Resource
database: InterPro
comment: Thymidylate_kinase

PTHR10344
type: Resource
database: PANTHER
comment: THYMIDYLATE KINASE
signature sequence match: PANTHER PTHR10344 match 1

PTHR10344:SF4
type: Resource
database: PANTHER
comment: UMP-CMP KINASE 2, MITOCHONDRIAL
signature sequence match: PANTHER PTHR10344:SF4 match 1

PF02223
type: Resource
database: Pfam
comment: Thymidylate_kin
signature sequence match: Pfam PF02223 match 1

TIGR00041
type: Resource
database: TIGRFAMs
comment: DTMP_kinase
signature sequence match: TIGRFAMs TIGR00041 match 1

PS01331
type: Resource
database: PROSITE
comment: THYMIDYLATE_KINASE
signature sequence match: PROSITE PS01331 match 1

SIPDDF2DBC7F9F615ED
type: Structured Name
full name: Thymidylate kinase
ec name: 2.7.4.9

SIP4D3B11F3CE4CE29B
type: Structured Name
full name: dTMP kinase

tmk
type: Gene
locus name: COPRO5265_0461

SIPAC26F9F7BD7C14CE
type: Function Annotation
comment: Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis.

SIP476907AF8F67A95E
type: Similarity Annotation
comment: Belongs to the thymidylate kinase family.

PRO_1000097388
type: Chain Annotation
comment: Thymidylate kinase
mass: 21983
range: 18636005759465006tt1tt193

18636005759465006tt1
type: Position
type: ExactPosition
position: 1
reference: MFIVVEGIDGCGKSTVASLLAAEIGKKRPVFHTFEPGHVRDGLYRELIMENVDNPFVVAALFTIDRAEHVKKMIKPALAKGEWVVCERYADSTLAYQGYGMGLDKELINRMNEEAIDGLWPDKIFYLDIEPHLALARLQNKEKDALEGQGLEFLQRVREGYEEIARTRGYIYMDATLPPEIIVKRILEEVKLQ

18636005759465006tt193
type: Position
type: ExactPosition
position: 193
reference: MFIVVEGIDGCGKSTVASLLAAEIGKKRPVFHTFEPGHVRDGLYRELIMENVDNPFVVAALFTIDRAEHVKKMIKPALAKGEWVVCERYADSTLAYQGYGMGLDKELINRMNEEAIDGLWPDKIFYLDIEPHLALARLQNKEKDALEGQGLEFLQRVREGYEEIARTRGYIYMDATLPPEIIVKRILEEVKLQ

18636005759465006tt7
type: Position
type: ExactPosition
position: 7
reference: MFIVVEGIDGCGKSTVASLLAAEIGKKRPVFHTFEPGHVRDGLYRELIMENVDNPFVVAALFTIDRAEHVKKMIKPALAKGEWVVCERYADSTLAYQGYGMGLDKELINRMNEEAIDGLWPDKIFYLDIEPHLALARLQNKEKDALEGQGLEFLQRVREGYEEIARTRGYIYMDATLPPEIIVKRILEEVKLQ

18636005759465006tt14
type: Position
type: ExactPosition
position: 14
reference: MFIVVEGIDGCGKSTVASLLAAEIGKKRPVFHTFEPGHVRDGLYRELIMENVDNPFVVAALFTIDRAEHVKKMIKPALAKGEWVVCERYADSTLAYQGYGMGLDKELINRMNEEAIDGLWPDKIFYLDIEPHLALARLQNKEKDALEGQGLEFLQRVREGYEEIARTRGYIYMDATLPPEIIVKRILEEVKLQ

MFIVVEGIDGCGKSTVASLLAAEIGKKRPVFHTFEPGHVRDGLYRELIMENVDNPFVVAALFTIDRAEHVKKMIKPALAKGEWVVCERYADSTLAYQGYGMGLDKELINRMNEEAIDGLWPDKIFYLDIEPHLALARLQNKEKDALEGQGLEFLQRVREGYEEIARTRGYIYMDATLPPEIIVKRILEEVKLQ
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 21983

http://purl.uniprot.org/uniprot/B5Y7S6#attribution-A2FEB91BDB282987A0BB510D5FD4108B
manual: true
evidence: ECO_0000255
source: MF_00165

B5Y8Q8
type: Protein
reviewed: true
created: 2010-08-10
modified: 2023-05-03
version: 83
mnemonic: LON_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP61CAE49D3392EE1A
alternative name: SIP3CBBFFFBED342ADF
enzyme: http://purl.uniprot.org/enzyme/3.4.21.53
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP52467605C9CCBD49
annotation: SIP5CD398045C76FF76
annotation: SIP60364677782048A8
annotation: SIP831F4A1872A4B292
annotation: SIP9BB553E4E4D2A994
annotation: SIPBD82566627DF5717
annotation: PRO_0000396550
annotation: SIP4067F4C542BF35F6
annotation: SIP0F15C31F2B3F4416
annotation: SIPBA7349804E6574F5
annotation: SIP639F8E4C3E3CAE4B
annotation: SIP61D56ACEAE9BE3A3
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/720
classified with: http://purl.uniprot.org/keywords/346
classified with: GO_0005737
classified with: GO_0005524
classified with: GO_0016887
classified with: GO_0004176
classified with: GO_0043565
classified with: GO_0004252
classified with: GO_0034605
classified with: GO_0006515
sequence: B5Y8Q8-1
proteome: Chromosome

B5Y8Q8-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0466
type: Resource
database: eggNOG
comment: Bacteria

cd19500
type: Resource
database: CDD
comment: RecA-like_Lon
signature sequence match: CDD cd19500 match 1

http://purl.uniprot.org/gene3d/2.30.130.40
type: Resource
database: Gene3D
comment: LON domain-like
signature sequence match: Gene3D 2.30.130.40 match 1

MF_01973
type: Resource
database: HAMAP
comment: lon_bact
signature sequence match: HAMAP MF 01973 match 1

IPR003959
type: Resource
database: InterPro
comment: ATPase_AAA_core

IPR027543
type: Resource
database: InterPro
comment: Lon_bac

IPR004815
type: Resource
database: InterPro
comment: Lon_bac/euk-typ

IPR008269
type: Resource
database: InterPro
comment: Lon_proteolytic

IPR027065
type: Resource
database: InterPro
comment: Lon_Prtase

IPR003111
type: Resource
database: InterPro
comment: Lon_prtase_N

IPR046336
type: Resource
database: InterPro
comment: Lon_prtase_N_sf

IPR008268
type: Resource
database: InterPro
comment: Peptidase_S16_AS

IPR015947
type: Resource
database: InterPro
comment: PUA-like_sf

IPR020568
type: Resource
database: InterPro
comment: Ribosomal_S5_D2-typ_fold

IPR014721
type: Resource
database: InterPro
comment: Ribosomal_S5_D2-typ_fold_subgr

PTHR10046
type: Resource
database: PANTHER
comment: ATP DEPENDENT LON PROTEASE FAMILY MEMBER
signature sequence match: PANTHER PTHR10046 match 1

PTHR10046:SF24
type: Resource
database: PANTHER
comment: LON PROTEASE HOMOLOG 2, PEROXISOMAL
signature sequence match: PANTHER PTHR10046:SF24 match 1

PF00004
type: Resource
database: Pfam
comment: AAA
signature sequence match: Pfam PF00004 match 1

PF05362
type: Resource
database: Pfam
comment: Lon_C
signature sequence match: Pfam PF05362 match 1

PF02190
type: Resource
database: Pfam
comment: LON_substr_bdg
signature sequence match: Pfam PF02190 match 1

PIRSF001174
type: Resource
database: PIRSF
comment: Lon_proteas
signature sequence match: PIRSF PIRSF001174 match 1

PR00830
type: Resource
database: PRINTS
comment: ENDOLAPTASE

SM00464
type: Resource
database: SMART
comment: LON
signature sequence match: SMART SM00464 match 1

SSF88697
type: Resource
database: SUPFAM
comment: PUA domain-like
signature sequence match: SUPFAM SSF88697 match 1

SSF54211
type: Resource
database: SUPFAM
comment: Ribosomal protein S5 domain 2-like
signature sequence match: SUPFAM SSF54211 match 1
signature sequence match: SUPFAM SSF54211 match 2

TIGR00763
type: Resource
database: TIGRFAMs
comment: lon
signature sequence match: TIGRFAMs TIGR00763 match 1

PS51787
type: Resource
database: PROSITE
comment: LON_N
signature sequence match: PROSITE PS51787 match 1

PS51786
type: Resource
database: PROSITE
comment: LON_PROTEOLYTIC
signature sequence match: PROSITE PS51786 match 1

PS01046
type: Resource
database: PROSITE
comment: LON_SER
signature sequence match: PROSITE PS01046 match 1

SIP61CAE49D3392EE1A
type: Structured Name
full name: Lon protease
ec name: 3.4.21.53

SIP3CBBFFFBED342ADF
type: Structured Name
full name: ATP-dependent protease La

lon
type: Gene
locus name: COPRO5265_0816

SIP52467605C9CCBD49
type: Function Annotation
comment: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.

SIP60364677782048A8
type: Subunit Annotation
comment: Homohexamer. Organized in a ring with a central cavity.

SIP9BB553E4E4D2A994
type: Induction Annotation
comment: By heat shock.

SIPBD82566627DF5717
type: Similarity Annotation
comment: Belongs to the peptidase S16 family.

PRO_0000396550
type: Chain Annotation
comment: Lon protease
mass: 85999
range: 18636005776111662tt1tt768

18636005776111662tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y8Q8-1

18636005776111662tt768
type: Position
type: ExactPosition
position: 768
reference: B5Y8Q8-1

SIP4067F4C542BF35F6
type: Domain Extent Annotation
comment: Lon N-terminal
range: 18636005776111662tt5tt195

18636005776111662tt5
type: Position
type: ExactPosition
position: 5
reference: B5Y8Q8-1

18636005776111662tt195
type: Position
type: ExactPosition
position: 195
reference: B5Y8Q8-1

SIP0F15C31F2B3F4416
type: Domain Extent Annotation
comment: Lon proteolytic
range: 18636005776111662tt585tt766

18636005776111662tt585
type: Position
type: ExactPosition
position: 585
reference: B5Y8Q8-1

18636005776111662tt766
type: Position
type: ExactPosition
position: 766
reference: B5Y8Q8-1

18636005776111662tt672
type: Position
type: ExactPosition
position: 672
reference: B5Y8Q8-1

18636005776111662tt715
type: Position
type: ExactPosition
position: 715
reference: B5Y8Q8-1

18636005776111662tt349
type: Position
type: ExactPosition
position: 349
reference: B5Y8Q8-1

18636005776111662tt356
type: Position
type: ExactPosition
position: 356
reference: B5Y8Q8-1

B5Y8Q8-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 85999
value: MSEKLPVIPLKNVVMFPGIVLPLLIGRPKSIKALEEAMKGTKQVILLAQKDENIDEPAPSDLYDVGVIGEVIQIFRAPDGTVRMVVEAKTRVKASVSDSGEFLEGNYEVLEEVEGDATRTEALVKATIARFEEYARLSGRIPIEVVAGIGGLDNPGKIADMVAANMFISYYEKQKVLELLSIPERLEHVLQLLLREIEVLKLSQEIEETVRERMEKNQREYILREQLKAIQEELGEKDERTIEIEQYKKRIEESGMPEEARKKAEEELDRLQRMPPYSAELAVIRTYLDWLVSLPWNARTEDEDDLKTVKQKLDKSHYGLDDAKERIVEFIATKKLSSNPKAPILCLVGPPGVGKTSLAKAIATALNRKLVRISLGGIRDEAEIRGHRRTYVGAMPGRIIQGIRSAGTKNPVFVLDEIDKLSSDFLGDPSAALLEALDPEQNYAFQDHYLEVPFDLSEVFFITTANNLYTIPPALLDRMEVIRVPGYTEEEKLHIAKDFILPKLYEQSGLNPEEVSFSDQAIIRIIREYTREAGVRNLERNLLSILRKLAVEKLEKGFSRVRITVKNVEDYLGVPKFRYGKALEKPEIGVVAGLAWTEFGGETMLIECQVVKGKGQLILTGSLGQTLKESAMAALTYVRSRAKQLGIDEEFYKKYDIHVHAPEGAIPKDGPSAGITIATAMISALKKEPVPNDLAMTGEITITGKVLPIGGVKEKVLAAHRIGLDRVILPKDNKINMEEIGDEVKKKLRFYFVDTMDQVVEIVFGKTS

http://purl.uniprot.org/uniprot/B5Y8Q8#attribution-9166DAC537A1E30C973281F569878D62
manual: true
evidence: ECO_0000255
source: MF_01973

http://purl.uniprot.org/uniprot/B5Y8Q8#attribution-65047B5AE601AA6DF0656D53B75E9A1A
manual: true
evidence: ECO_0000255
source: PRU01122

http://purl.uniprot.org/uniprot/B5Y8Q8#attribution-F0BDAAE288EB7793D0BE5B8D00E0E832
manual: true
evidence: ECO_0000255
source: PRU01123

B5Y8R8
type: Protein
reviewed: true
created: 2009-06-16
modified: 2023-02-22
version: 74
mnemonic: MIAA_COPPD
citation: SIP37D9E8E91EBB1099
conflicting sequence: SIPD4CF71EA4BCE9F63
recommended name: SIPE5C716C2B2ABE366
alternative name: SIP820BA5BDF2F8060E
alternative name: SIP53570FAC3202C737
enzyme: http://purl.uniprot.org/enzyme/2.5.1.75
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPCB717CA0D06C02A7
annotation: SIP9ED89FA106CC9044
annotation: SIP71509EE9C79D72A7
annotation: SIPA06BB7DBDF90031F
annotation: SIPADE5F139B3561510
annotation: SIP362D96FD7060047E
annotation: PRO_0000377126
annotation: SIPD7CD9722CE7C2F4A
annotation: SIPBF6588E50D10150C
annotation: SIP2ADB58292CF38AA6
annotation: SIP6CE531DC9C09ACB1
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/460
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/808
classified with: http://purl.uniprot.org/keywords/819
classified with: GO_0005524
classified with: GO_0052381
classified with: GO_0008033
sequence: B5Y8R8-1
proteome: Chromosome

B5Y8R8-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

EMBL ACI17388.1
comment: Different initiation.

COG0324
type: Resource
database: eggNOG
comment: Bacteria

MF_00185
type: Resource
database: HAMAP
comment: IPP_trans
signature sequence match: HAMAP MF 00185 match 1

IPR039657
type: Resource
database: InterPro
comment: Dimethylallyltransferase

IPR018022
type: Resource
database: InterPro
comment: IPT

PTHR11088
type: Resource
database: PANTHER
comment: TRNA DIMETHYLALLYLTRANSFERASE
signature sequence match: PANTHER PTHR11088 match 1

PTHR11088:SF60
type: Resource
database: PANTHER
comment: TRNA DIMETHYLALLYLTRANSFERASE 9
signature sequence match: PANTHER PTHR11088:SF60 match 1

PF01715
type: Resource
database: Pfam
comment: IPPT
signature sequence match: Pfam PF01715 match 1

TIGR00174
type: Resource
database: TIGRFAMs
comment: miaA
signature sequence match: TIGRFAMs TIGR00174 match 1

SIPE5C716C2B2ABE366
type: Structured Name
full name: tRNA dimethylallyltransferase
ec name: 2.5.1.75

SIP820BA5BDF2F8060E
type: Structured Name
full name: Dimethylallyl diphosphate:tRNA dimethylallyltransferase
short name: DMAPP:tRNA dimethylallyltransferase
short name: DMATase

SIP53570FAC3202C737
type: Structured Name
full name: Isopentenyl-diphosphate:tRNA isopentenyltransferase
short name: IPP transferase
short name: IPPT
short name: IPTase

miaA
type: Gene
locus name: COPRO5265_0826

SIPCB717CA0D06C02A7
type: Function Annotation
comment: Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A).

SIPA06BB7DBDF90031F
type: Subunit Annotation
comment: Monomer.

SIPADE5F139B3561510
type: Similarity Annotation
comment: Belongs to the IPP transferase family.

PRO_0000377126
type: Chain Annotation
comment: tRNA dimethylallyltransferase
mass: 35391
range: 18636005776177198tt1tt312

18636005776177198tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y8R8-1

18636005776177198tt312
type: Position
type: ExactPosition
position: 312
reference: B5Y8R8-1

18636005776177198tt10
type: Position
type: ExactPosition
position: 10
reference: B5Y8R8-1

18636005776177198tt17
type: Position
type: ExactPosition
position: 17
reference: B5Y8R8-1

18636005776177198tt12
type: Position
type: ExactPosition
position: 12
reference: B5Y8R8-1

SIP2ADB58292CF38AA6
type: Site Annotation
comment: Interaction with substrate tRNA
range: 18636005776177198tt102tt102

18636005776177198tt102
type: Position
type: ExactPosition
position: 102
reference: B5Y8R8-1

SIP6CE531DC9C09ACB1
type: Site Annotation
comment: Interaction with substrate tRNA
range: 18636005776177198tt125tt125

18636005776177198tt125
type: Position
type: ExactPosition
position: 125
reference: B5Y8R8-1

substrate

B5Y8R8-1
type: Simple Sequence
modified: 2009-06-16
version: 2
mass: 35391
value: MGKPLISILGPTGVGKTDLAFRLACSLDKANILSVDTGSFYKAATIGTAKPPKEFTSRVRHWFIDILECQEVYSVGAFVSDCSSILQDLWAEGVTPIVVAGTLFYYYALVGERSFSAVPSDSTVREKVEEKARVYGEEYLRQELRKVDPEREKNILPGDIRRLTRALEIAELGFKPTEAVVTNKLDFDINLKIGLKMPRDLYRTRLRDRVEYMISAGLIEEVQDILSKTGNSSLPCLNQIGYKEVCSYLKGEIKNKDELVERIFLSHWTYARKQIKWLKKDKTIVWFDVSEKSPDTLVEEVLTLVQSTLENC

http://purl.uniprot.org/uniprot/B5Y8R8#attribution-11E3D5F5BA2E296178F693DEDC766919
manual: true
evidence: ECO_0000255
source: MF_00185

http://purl.uniprot.org/uniprot/B5Y8R8#attribution-080ED3982FEC43F7C43A0689717F3D20
manual: true
evidence: ECO_0000305

B5Y8R7
type: Protein
reviewed: true
created: 2009-05-05
modified: 2023-02-22
version: 78
mnemonic: MIAB_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPAEBA398F3C467152
alternative name: SIP8A030668BE5678A2
alternative name: SIPB9D8C57CC9EADCD7
enzyme: http://purl.uniprot.org/enzyme/2.8.4.3
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP624E115F20143CE5
annotation: SIP27C3CF0F47D2F952
annotation: SIPCD2881CC49F54163
annotation: SIP61EB6F86BAF9F02E
annotation: SIP0C6A75990C205973
annotation: SIPA89BFD1897C4CEEA
annotation: PRO_0000374237
annotation: SIP8FCEC8499499243B
annotation: SIP01A42043A1B9AD4B
annotation: SIPFF32A67C6C75C9A5
annotation: SIP66D56014BE2071C9
annotation: SIP468A0738D331362E
annotation: SIP5D3EA5D2D7234A2E
annotation: SIP337C0E37093AE301
annotation: SIPFAD519B6AE473630
annotation: SIP0F4D63F534D954F5
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/4
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/949
classified with: http://purl.uniprot.org/keywords/808
classified with: http://purl.uniprot.org/keywords/819
classified with: GO_0005737
classified with: GO_0051539
classified with: GO_0046872
classified with: GO_0035596
classified with: GO_0006400
sequence: B5Y8R7-1
proteome: Chromosome

B5Y8R7-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0621
type: Resource
database: eggNOG
comment: Bacteria

cd01335
type: Resource
database: CDD
comment: Radical_SAM
signature sequence match: CDD cd01335 match 1

http://purl.uniprot.org/gene3d/3.40.50.12160
type: Resource
database: Gene3D
comment: Methylthiotransferase, N-terminal domain
signature sequence match: Gene3D 3.40.50.12160 match 1

http://purl.uniprot.org/gene3d/3.80.30.20
type: Resource
database: Gene3D
comment: tm_1862 like domain
signature sequence match: Gene3D 3.80.30.20 match 1

MF_01864
type: Resource
database: HAMAP
comment: tRNA_metthiotr_MiaB
signature sequence match: HAMAP MF 01864 match 1

IPR006638
type: Resource
database: InterPro
comment: Elp3/MiaA/NifB-like_rSAM

IPR005839
type: Resource
database: InterPro
comment: Methylthiotransferase

IPR020612
type: Resource
database: InterPro
comment: Methylthiotransferase_CS

IPR013848
type: Resource
database: InterPro
comment: Methylthiotransferase_N

IPR038135
type: Resource
database: InterPro
comment: Methylthiotransferase_N_sf

IPR006463
type: Resource
database: InterPro
comment: MiaB_methiolase

IPR007197
type: Resource
database: InterPro
comment: rSAM

IPR023404
type: Resource
database: InterPro
comment: rSAM_horseshoe

IPR002792
type: Resource
database: InterPro
comment: TRAM_dom

PTHR43020
type: Resource
database: PANTHER
comment: CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1
signature sequence match: PANTHER PTHR43020 match 1

PTHR43020:SF2
type: Resource
database: PANTHER
comment: MITOCHONDRIAL TRNA METHYLTHIOTRANSFERASE CDK5RAP1
signature sequence match: PANTHER PTHR43020:SF2 match 1

PF04055
type: Resource
database: Pfam
comment: Radical_SAM
signature sequence match: Pfam PF04055 match 1

PF01938
type: Resource
database: Pfam
comment: TRAM
signature sequence match: Pfam PF01938 match 1

PF00919
type: Resource
database: Pfam
comment: UPF0004
signature sequence match: Pfam PF00919 match 1

SFLDF00273
type: Resource
database: SFLD
comment: (dimethylallyl)adenosine_tRNA
signature sequence match: SFLD SFLDF00273 match 1

SFLDG01082
type: Resource
database: SFLD
comment: B12-binding_domain_containing
signature sequence match: SFLD SFLDG01082 match 1

SFLDG01061
type: Resource
database: SFLD
comment: methylthiotransferase
signature sequence match: SFLD SFLDG01061 match 1

SM00729
type: Resource
database: SMART
comment: Elp3
signature sequence match: SMART SM00729 match 1

SSF102114
type: Resource
database: SUPFAM
comment: Radical SAM enzymes
signature sequence match: SUPFAM SSF102114 match 1

TIGR01574
type: Resource
database: TIGRFAMs
comment: miaB-methiolase
signature sequence match: TIGRFAMs TIGR01574 match 1

TIGR00089
type: Resource
database: TIGRFAMs
comment: radical SAM methylthiotransferase, MiaB/RimO family
signature sequence match: TIGRFAMs TIGR00089 match 1

PS51449
type: Resource
database: PROSITE
comment: MTTASE_N
signature sequence match: PROSITE PS51449 match 1

PS01278
type: Resource
database: PROSITE
comment: MTTASE_RADICAL
signature sequence match: PROSITE PS01278 match 1

PS51918
type: Resource
database: PROSITE
comment: RADICAL_SAM
signature sequence match: PROSITE PS51918 match 1

PS50926
type: Resource
database: PROSITE
comment: TRAM
signature sequence match: PROSITE PS50926 match 1

SIPAEBA398F3C467152
type: Structured Name
full name: tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
ec name: 2.8.4.3

SIP8A030668BE5678A2
type: Structured Name
full name: (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB

SIPB9D8C57CC9EADCD7
type: Structured Name
full name: tRNA-i(6)A37 methylthiotransferase

miaB
type: Gene
locus name: COPRO5265_0825

SIP624E115F20143CE5
type: Function Annotation
comment: Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.

SIPCD2881CC49F54163
type: Cofactor Annotation
comment: Binds 2 [4Fe-4S] clusters. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
cofactor: CHEBI_49883

SIP61EB6F86BAF9F02E
type: Subunit Annotation
comment: Monomer.

SIPA89BFD1897C4CEEA
type: Similarity Annotation
comment: Belongs to the methylthiotransferase family. MiaB subfamily.

PRO_0000374237
type: Chain Annotation
comment: tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
mass: 48122
range: 18636005776176942tt1tt426

18636005776176942tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y8R7-1

18636005776176942tt426
type: Position
type: ExactPosition
position: 426
reference: B5Y8R7-1

SIP8FCEC8499499243B
type: Domain Extent Annotation
comment: MTTase N-terminal
range: 18636005776176942tt1tt112

18636005776176942tt112
type: Position
type: ExactPosition
position: 112
reference: B5Y8R7-1

SIP01A42043A1B9AD4B
type: Domain Extent Annotation
comment: Radical SAM core
range: 18636005776176942tt130tt360

18636005776176942tt130
type: Position
type: ExactPosition
position: 130
reference: B5Y8R7-1

18636005776176942tt360
type: Position
type: ExactPosition
position: 360
reference: B5Y8R7-1

SIPFF32A67C6C75C9A5
type: Domain Extent Annotation
comment: TRAM
range: 18636005776176942tt363tt426

18636005776176942tt363
type: Position
type: ExactPosition
position: 363
reference: B5Y8R7-1

18636005776176942tt10
type: Position
type: ExactPosition
position: 10
reference: B5Y8R7-1

18636005776176942tt46
type: Position
type: ExactPosition
position: 46
reference: B5Y8R7-1

18636005776176942tt75
type: Position
type: ExactPosition
position: 75
reference: B5Y8R7-1

18636005776176942tt144
type: Position
type: ExactPosition
position: 144
reference: B5Y8R7-1

18636005776176942tt148
type: Position
type: ExactPosition
position: 148
reference: B5Y8R7-1

18636005776176942tt151
type: Position
type: ExactPosition
position: 151
reference: B5Y8R7-1

1
subclass of: CHEBI_49883

2
subclass of: CHEBI_49883
comment: 4Fe-4S-S-AdoMet

B5Y8R7-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 48122
value: MKYYIFTYGCQMNKNDSEMVSGILKSSGWEEAKNVVDSDLVVINTCSVRLHAEERAIGTISALKKLGKKVVVMGCMSEVRGNEIMSRFPHVQAVLGPSYEAHILDVLNGERRILVGDEKVDFEKYSSANRKEKHSVYVSIMKGCDDFCTYCIVPFTRGRVQSRDPESILEEVRVCVDNGAVEITLLGQNVNDYGKDLSGWDFVSLVERVATIDGVRRIRFMSPHPANFKKDDITRLANLPQVAPYYHLPLQSGDDEILRRMNRKYTTGEFAELVGFIRESVPNVAIGTDLIVGFPGESDEHFQNTFKFLEKMQFDVVYMAIYSPRPGTAAARQETSFVPAEVAKARYDELLRLQEKISYSINQRYVGTLQEVLIDREDKTTGKFIGRTPTNKTVVFTSIRHVSPGEFVDVRINEAKSWVLYGEAAD

http://purl.uniprot.org/uniprot/B5Y8R7#attribution-BC21C7574F145C51D71164C2E000C0F6
manual: true
evidence: ECO_0000255
source: MF_01864

http://purl.uniprot.org/uniprot/B5Y8R7#attribution-3F4EA4141FE4507DF0695D0A72C2893B
manual: true
evidence: ECO_0000255
source: PRU01266

B5Y8H0
type: Protein
reviewed: true
created: 2009-03-24
modified: 2023-02-22
version: 84
mnemonic: MURA_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP6A98CA58F9006F19
alternative name: SIP2E66DBCB945FE152
alternative name: SIPFF4EEF15765D66CC
enzyme: http://purl.uniprot.org/enzyme/2.5.1.7
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP56106C69268CC6BB
annotation: SIP4223F44E409FC058
annotation: SIP84FA991400199223
annotation: SIPCB7C323D1E288683
annotation: SIPAA5194739AF32441
annotation: PRO_1000094682
annotation: SIPABD597905A07369E
annotation: SIP511DC97A1DA225B0
annotation: SIPEA8D8FB6B209FBE3
annotation: SIPFB0EFB9F9F51BBB5
annotation: SIP10A867573655F168
annotation: SIP7085D3AC94116D89
annotation: SIPDA94E57A8186D88B
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/132
classified with: http://purl.uniprot.org/keywords/961
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/573
classified with: http://purl.uniprot.org/keywords/670
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/808
classified with: GO_0005737
classified with: GO_0008760
classified with: GO_0007049
classified with: GO_0051301
classified with: GO_0071555
classified with: GO_0009252
classified with: GO_0008360
classified with: GO_0019277
sequence: B5Y8H0-1
proteome: Chromosome

B5Y8H0-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0766
type: Resource
database: eggNOG
comment: Bacteria

cd01555
type: Resource
database: CDD
comment: UdpNAET
signature sequence match: CDD cd01555 match 1

http://purl.uniprot.org/gene3d/3.65.10.10
type: Resource
database: Gene3D
comment: Enolpyruvate transferase domain
signature sequence match: Gene3D 3.65.10.10 match 1
signature sequence match: Gene3D 3.65.10.10 match 2

MF_00111
type: Resource
database: HAMAP
comment: MurA
signature sequence match: HAMAP MF 00111 match 1

IPR001986
type: Resource
database: InterPro
comment: Enolpyruvate_Tfrase_dom

IPR036968
type: Resource
database: InterPro
comment: Enolpyruvate_Tfrase_sf

IPR013792
type: Resource
database: InterPro
comment: RNA3'P_cycl/enolpyr_Trfase_a/b

IPR005750
type: Resource
database: InterPro
comment: UDP_GlcNAc_COvinyl_MurA

PTHR43783
type: Resource
database: PANTHER
comment: UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYLTRANSFERASE
signature sequence match: PANTHER PTHR43783 match 1

PTHR43783:SF1
type: Resource
database: PANTHER
comment: UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYLTRANSFERASE
signature sequence match: PANTHER PTHR43783:SF1 match 1

PF00275
type: Resource
database: Pfam
comment: EPSP_synthase
signature sequence match: Pfam PF00275 match 1

SSF55205
type: Resource
database: SUPFAM
comment: EPT/RTPC-like
signature sequence match: SUPFAM SSF55205 match 1

TIGR01072
type: Resource
database: TIGRFAMs
comment: murA
signature sequence match: TIGRFAMs TIGR01072 match 1

SIP6A98CA58F9006F19
type: Structured Name
full name: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
ec name: 2.5.1.7

SIP2E66DBCB945FE152
type: Structured Name
full name: Enoylpyruvate transferase

SIPFF4EEF15765D66CC
type: Structured Name
full name: UDP-N-acetylglucosamine enolpyruvyl transferase
short name: EPT

murA
type: Gene
locus name: COPRO5265_0719

SIP56106C69268CC6BB
type: Function Annotation
comment: Cell wall formation. Adds enolpyruvyl to UDP-N-acetylglucosamine.

SIPAA5194739AF32441
type: Similarity Annotation
comment: Belongs to the EPSP synthase family. MurA subfamily.

PRO_1000094682
type: Chain Annotation
comment: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
mass: 44326
range: 18636005775519790tt1tt425

18636005775519790tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y8H0-1

18636005775519790tt425
type: Position
type: ExactPosition
position: 425
reference: B5Y8H0-1

SIPABD597905A07369E
type: Active Site Annotation
comment: Proton donor
range: 18636005775519790tt115tt115

18636005775519790tt115
type: Position
type: ExactPosition
position: 115
reference: B5Y8H0-1

18636005775519790tt22
type: Position
type: ExactPosition
position: 22
reference: B5Y8H0-1

18636005775519790tt23
type: Position
type: ExactPosition
position: 23
reference: B5Y8H0-1

18636005775519790tt91
type: Position
type: ExactPosition
position: 91
reference: B5Y8H0-1

18636005775519790tt120
type: Position
type: ExactPosition
position: 120
reference: B5Y8H0-1

18636005775519790tt124
type: Position
type: ExactPosition
position: 124
reference: B5Y8H0-1

18636005775519790tt305
type: Position
type: ExactPosition
position: 305
reference: B5Y8H0-1

18636005775519790tt327
type: Position
type: ExactPosition
position: 327
reference: B5Y8H0-1

SIPDA94E57A8186D88B
type: Modified Residue Annotation
comment: 2-(S-cysteinyl)pyruvic acid O-phosphothioketal
range: 18636005775519790tt115tt115

B5Y8H0-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 44326
value: MSVLIIDGGIPLKGKVTAQGCKNSALAILAAAALCEDRVYLTNVPDIGDVKTMMSILRSLGYKVTWGSGLTIKPGVIKNYDLTHTGAGSIRGSLLFLGALLGRLGKVVLPMPGGCNIGTRPIDLHLKGLSLMGASLDIQGGNIVGEAPSGLKGAYVYLDFPSVGATENIMIAGALASGETTIENAAQDQQVVELGKFLMACGVKIHGLGTKVIRIKGKKEIGGVTFRISGDSIEAGTYAIAAAATRGSITVDGVDVTFLRPLLFKLQEAGIEVVVTNGHEVTVLPSPRPKGITIKTMPFPGFPTDLQPLMMSLLATAEGRSVITETVYDGRMGHVSELWKMGANIEVEGNTAIITGVEKLTGAPVVANNLRAGAALVVAGLSAEGRSVVYGMEHVMRGYSNIHQKLRALDAKVELVSDEEAVNIA

http://purl.uniprot.org/uniprot/B5Y8H0#attribution-CC386CAA8C549D76A8B556AC8890BA1A
manual: true
evidence: ECO_0000255
source: MF_00111

B5Y804
type: Protein
reviewed: true
created: 2009-07-28
modified: 2023-02-22
version: 76
mnemonic: NADD_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP078599EEAB49E8F0
alternative name: SIPFF4EB2E5D84318E2
alternative name: SIP5F9FE7C1138F1DFA
alternative name: SIP771ED6DCE9C56ECA
enzyme: http://purl.uniprot.org/enzyme/2.7.7.18
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPC4188C45D08813A0
annotation: SIP2AC0187B843A7929
annotation: SIP368038F911B06A6F
annotation: SIP1D4888E3645DC674
annotation: PRO_1000125348
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/520
classified with: http://purl.uniprot.org/keywords/548
classified with: http://purl.uniprot.org/keywords/662
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005524
classified with: GO_0004515
classified with: GO_0009435
sequence: MIKPLKSSRTGLLAGVFDPVHIGHLFMAHLAMEAANLDRVWFVPTHIPPHKDSAKVPYFHRVNMLEMALKEEPKFVLMELEREARPTYSYETILSVKHVLGEKPYFILGSDEWEELHNWRRYDLLVKNAIFIVVPRKPITVARPEAEAIFTDMTPINVSSTYIRQRVAKGKPITYLVPKTVETYIHENHLYYP
proteome: Chromosome

B5Y804-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG1057
type: Resource
database: eggNOG
comment: Bacteria

cd02165
type: Resource
database: CDD
comment: NMNAT
signature sequence match: CDD cd02165 match 1

MF_00244
type: Resource
database: HAMAP
comment: NaMN_adenylyltr
signature sequence match: HAMAP MF 00244 match 1

IPR005248
type: Resource
database: InterPro
comment: NadD/NMNAT

PTHR39321
type: Resource
database: PANTHER
comment: NICOTINATE-NUCLEOTIDE ADENYLYLTRANSFERASE-RELATED
signature sequence match: PANTHER PTHR39321 match 1

PTHR39321:SF3
type: Resource
database: PANTHER
comment: NICOTINATE-NUCLEOTIDE ADENYLYLTRANSFERASE-RELATED
signature sequence match: PANTHER PTHR39321:SF3 match 1

TIGR00482
type: Resource
database: TIGRFAMs
comment: nicotinate (nicotinamide) nucleotide adenylyltransferase
signature sequence match: TIGRFAMs TIGR00482 match 1

SIP078599EEAB49E8F0
type: Structured Name
full name: Probable nicotinate-nucleotide adenylyltransferase
ec name: 2.7.7.18

SIPFF4EB2E5D84318E2
type: Structured Name
full name: Deamido-NAD(+) diphosphorylase

SIP5F9FE7C1138F1DFA
type: Structured Name
full name: Deamido-NAD(+) pyrophosphorylase

SIP771ED6DCE9C56ECA
type: Structured Name
full name: Nicotinate mononucleotide adenylyltransferase
short name: NaMN adenylyltransferase

nadD
type: Gene
locus name: COPRO5265_0545

SIPC4188C45D08813A0
type: Function Annotation
comment: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).

SIP1D4888E3645DC674
type: Similarity Annotation
comment: Belongs to the NadD family.

PRO_1000125348
type: Chain Annotation
comment: Probable nicotinate-nucleotide adenylyltransferase
mass: 22451
range: 18636005773947950tt1tt193

18636005773947950tt1
type: Position
type: ExactPosition
position: 1
reference: MIKPLKSSRTGLLAGVFDPVHIGHLFMAHLAMEAANLDRVWFVPTHIPPHKDSAKVPYFHRVNMLEMALKEEPKFVLMELEREARPTYSYETILSVKHVLGEKPYFILGSDEWEELHNWRRYDLLVKNAIFIVVPRKPITVARPEAEAIFTDMTPINVSSTYIRQRVAKGKPITYLVPKTVETYIHENHLYYP

18636005773947950tt193
type: Position
type: ExactPosition
position: 193
reference: MIKPLKSSRTGLLAGVFDPVHIGHLFMAHLAMEAANLDRVWFVPTHIPPHKDSAKVPYFHRVNMLEMALKEEPKFVLMELEREARPTYSYETILSVKHVLGEKPYFILGSDEWEELHNWRRYDLLVKNAIFIVVPRKPITVARPEAEAIFTDMTPINVSSTYIRQRVAKGKPITYLVPKTVETYIHENHLYYP

MIKPLKSSRTGLLAGVFDPVHIGHLFMAHLAMEAANLDRVWFVPTHIPPHKDSAKVPYFHRVNMLEMALKEEPKFVLMELEREARPTYSYETILSVKHVLGEKPYFILGSDEWEELHNWRRYDLLVKNAIFIVVPRKPITVARPEAEAIFTDMTPINVSSTYIRQRVAKGKPITYLVPKTVETYIHENHLYYP
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 22451

http://purl.uniprot.org/uniprot/B5Y804#attribution-98F399F34700BDC9A5F5DD3D020F7DA5
manual: true
evidence: ECO_0000255
source: MF_00244

B5Y8Q4
type: Protein
reviewed: true
created: 2009-03-24
modified: 2023-02-22
version: 75
mnemonic: NADE_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP304048741B8C6737
enzyme: http://purl.uniprot.org/enzyme/6.3.1.5
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP053E28F9CAABF34E
annotation: SIP56851D25F266F994
annotation: SIP3A12310EE9288051
annotation: SIP1F7B5FC6A84BE57B
annotation: SIP64A60ACE725B62D8
annotation: PRO_1000099017
annotation: SIP030BBE0A952917AC
annotation: SIP7DB616EF3E67BC3B
annotation: SIP976E28CB8277B193
annotation: SIPCD464D70D3E2291B
annotation: SIPC93E4EFC8055C9BA
annotation: SIP9FC0E3B21DF21747
annotation: SIPE0E817B6EB0ED569
annotation: SIP828FCDE4D23DC196
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/436
classified with: http://purl.uniprot.org/keywords/460
classified with: http://purl.uniprot.org/keywords/479
classified with: http://purl.uniprot.org/keywords/520
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005737
classified with: GO_0005524
classified with: GO_0004359
classified with: GO_0046872
classified with: GO_0003952
classified with: GO_0008795
classified with: GO_0009435
sequence: B5Y8Q4-1
proteome: Chromosome

B5Y8Q4-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0171
type: Resource
database: eggNOG
comment: Bacteria

cd00553
type: Resource
database: CDD
comment: NAD_synthase
signature sequence match: CDD cd00553 match 1

MF_00193
type: Resource
database: HAMAP
comment: NadE_ammonia_dep
signature sequence match: HAMAP MF 00193 match 1

IPR022310
type: Resource
database: InterPro
comment: NAD/GMP_synthase

IPR003694
type: Resource
database: InterPro
comment: NAD_synthase

IPR022926
type: Resource
database: InterPro
comment: NH(3)-dep_NAD(+)_synth

PTHR23090:SF9
type: Resource
database: PANTHER
comment: GLUTAMINE-DEPENDENT NAD(+) SYNTHETASE
signature sequence match: PANTHER PTHR23090:SF9 match 1

PTHR23090
type: Resource
database: PANTHER
comment: NH 3 /GLUTAMINE-DEPENDENT NAD + SYNTHETASE
signature sequence match: PANTHER PTHR23090 match 1

PF02540
type: Resource
database: Pfam
comment: NAD_synthase
signature sequence match: Pfam PF02540 match 1
signature sequence match: Pfam PF02540 match 2

SSF52402
type: Resource
database: SUPFAM
comment: Adenine nucleotide alpha hydrolases-like
signature sequence match: SUPFAM SSF52402 match 1

TIGR00552
type: Resource
database: TIGRFAMs
comment: nadE
signature sequence match: TIGRFAMs TIGR00552 match 1

SIP304048741B8C6737
type: Structured Name
full name: NH(3)-dependent NAD(+) synthetase
ec name: 6.3.1.5

nadE
type: Gene
locus name: COPRO5265_0809

SIP053E28F9CAABF34E
type: Function Annotation
comment: Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.

SIP1F7B5FC6A84BE57B
type: Subunit Annotation
comment: Homodimer.

SIP64A60ACE725B62D8
type: Similarity Annotation
comment: Belongs to the NAD synthetase family.

PRO_1000099017
type: Chain Annotation
comment: NH(3)-dependent NAD(+) synthetase
mass: 34067
range: 18636005776110638tt1tt296

18636005776110638tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y8Q4-1

18636005776110638tt296
type: Position
type: ExactPosition
position: 296
reference: B5Y8Q4-1

18636005776110638tt30
type: Position
type: ExactPosition
position: 30
reference: B5Y8Q4-1

18636005776110638tt37
type: Position
type: ExactPosition
position: 37
reference: B5Y8Q4-1

18636005776110638tt36
type: Position
type: ExactPosition
position: 36
reference: B5Y8Q4-1

18636005776110638tt157
type: Position
type: ExactPosition
position: 157
reference: B5Y8Q4-1

18636005776110638tt182
type: Position
type: ExactPosition
position: 182
reference: B5Y8Q4-1

18636005776110638tt190
type: Position
type: ExactPosition
position: 190
reference: B5Y8Q4-1

18636005776110638tt197
type: Position
type: ExactPosition
position: 197
reference: B5Y8Q4-1

18636005776110638tt206
type: Position
type: ExactPosition
position: 206
reference: B5Y8Q4-1

18636005776110638tt228
type: Position
type: ExactPosition
position: 228
reference: B5Y8Q4-1

B5Y8Q4-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 34067
value: MNTAMEETQRIEQFLRKALVSERKHGYLIGVSGGLDSAVVLKLLVQAVGKENVLGLILPDRDTEKKSTTLARSLLEQEKVPYKVISMTPLLRHLGVYKDMPLFLLPTRGLKESIVRRFYNDYTKKLNKPVFFAQWEEPPTQLPYFYEGIAYYRIKHRVRMATLYYYAEKNDYLLVGCTNLSERLIGFYVKYGDDVCDVAPIAHLYKTEVRQLSEYLSVPEDIRNRPPSPDLIPGITDEYSLGINYETLDQILAGLEEGKTAEDLKQLFPADIVELVINQVKFTQKLEGKPYMLKRA

http://purl.uniprot.org/uniprot/B5Y8Q4#attribution-9D37965185A375EFBE2D3042DCC444A6
manual: true
evidence: ECO_0000255
source: MF_00193

B5Y805
type: Protein
reviewed: true
created: 2009-10-13
modified: 2023-02-22
version: 89
mnemonic: OBG_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPA5E2429383B9177E
alternative name: SIP15086E8A78F9CF30
enzyme: http://purl.uniprot.org/enzyme/3.6.5.-
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPF224A0079C342C85
annotation: SIPD983EAE69AEA6D68
annotation: SIP482EB036AAB9E360
annotation: SIPC8B7327ABDC29616
annotation: SIP44A231BC46B97270
annotation: PRO_0000385857
annotation: SIP5F519D2AD4FE3FD0
annotation: SIP75F832E3759B7F81
annotation: SIP186D9757628E81C4
annotation: SIP6EED73329172F9CF
annotation: SIP4C6C80EB84CAC0F5
annotation: SIP9361E293CFC85041
annotation: SIP0221D660AD7907B3
annotation: SIP1F5974B5BA0C46B0
annotation: SIP9931E3EE7D2C63EF
annotation: SIP1C12AAFD0EACB7D9
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/342
classified with: http://purl.uniprot.org/keywords/378
classified with: http://purl.uniprot.org/keywords/460
classified with: http://purl.uniprot.org/keywords/479
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005737
classified with: GO_0005525
classified with: GO_0003924
classified with: GO_0000287
classified with: GO_0042254
sequence: B5Y805-1
proteome: Chromosome

B5Y805-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0536
type: Resource
database: eggNOG
comment: Bacteria

cd01898
type: Resource
database: CDD
comment: Obg
signature sequence match: CDD cd01898 match 1

http://purl.uniprot.org/gene3d/3.30.300.350
type: Resource
database: Gene3D
comment: GTP-binding protein OBG, C-terminal domain
signature sequence match: Gene3D 3.30.300.350 match 1

http://purl.uniprot.org/gene3d/2.70.210.12
type: Resource
database: Gene3D
comment: GTP1/OBG domain
signature sequence match: Gene3D 2.70.210.12 match 1

MF_01454
type: Resource
database: HAMAP
comment: GTPase_Obg
signature sequence match: HAMAP MF 01454 match 1

IPR031167
type: Resource
database: InterPro
comment: G_OBG

IPR006073
type: Resource
database: InterPro
comment: GTP-bd

IPR014100
type: Resource
database: InterPro
comment: GTP-bd_Obg/CgtA

IPR036346
type: Resource
database: InterPro
comment: GTP-bd_prot_GTP1/OBG_C_sf

IPR006074
type: Resource
database: InterPro
comment: GTP1-OBG_CS

IPR006169
type: Resource
database: InterPro
comment: GTP1_OBG_dom

IPR036726
type: Resource
database: InterPro
comment: GTP1_OBG_dom_sf

IPR045086
type: Resource
database: InterPro
comment: OBG_GTPase

IPR015349
type: Resource
database: InterPro
comment: OCT_dom

IPR005225
type: Resource
database: InterPro
comment: Small_GTP-bd_dom

PTHR11702
type: Resource
database: PANTHER
comment: DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED
signature sequence match: PANTHER PTHR11702 match 1

PTHR11702:SF31
type: Resource
database: PANTHER
comment: MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 2
signature sequence match: PANTHER PTHR11702:SF31 match 1

PF09269
type: Resource
database: Pfam
comment: DUF1967
signature sequence match: Pfam PF09269 match 1

PF01018
type: Resource
database: Pfam
comment: GTP1_OBG
signature sequence match: Pfam PF01018 match 1

PF01926
type: Resource
database: Pfam
comment: MMR_HSR1
signature sequence match: Pfam PF01926 match 1

PR00326
type: Resource
database: PRINTS
comment: GTP1OBG

SSF102741
type: Resource
database: SUPFAM
comment: Obg GTP-binding protein C-terminal domain
signature sequence match: SUPFAM SSF102741 match 1

SSF82051
type: Resource
database: SUPFAM
comment: Obg GTP-binding protein N-terminal domain
signature sequence match: SUPFAM SSF82051 match 1

TIGR02729
type: Resource
database: TIGRFAMs
comment: Obg_CgtA
signature sequence match: TIGRFAMs TIGR02729 match 1

TIGR00231
type: Resource
database: TIGRFAMs
comment: small_GTP
signature sequence match: TIGRFAMs TIGR00231 match 1

PS51710
type: Resource
database: PROSITE
comment: G_OBG
signature sequence match: PROSITE PS51710 match 1

PS00905
type: Resource
database: PROSITE
comment: GTP1_OBG
signature sequence match: PROSITE PS00905 match 1

PS51883
type: Resource
database: PROSITE
comment: OBG
signature sequence match: PROSITE PS51883 match 1

PS51881
type: Resource
database: PROSITE
comment: OCT
signature sequence match: PROSITE PS51881 match 1

SIPA5E2429383B9177E
type: Structured Name
full name: GTPase Obg
ec name: 3.6.5.-

SIP15086E8A78F9CF30
type: Structured Name
full name: GTP-binding protein Obg

obg
type: Gene
locus name: COPRO5265_0546

SIPF224A0079C342C85
type: Function Annotation
comment: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control.

SIP482EB036AAB9E360
type: Subunit Annotation
comment: Monomer.

SIP44A231BC46B97270
type: Similarity Annotation
comment: Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.

PRO_0000385857
type: Chain Annotation
comment: GTPase Obg
mass: 46625
range: 18636005773948206tt1tt419

18636005773948206tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y805-1

18636005773948206tt419
type: Position
type: ExactPosition
position: 419
reference: B5Y805-1

SIP5F519D2AD4FE3FD0
type: Domain Extent Annotation
comment: Obg
range: 18636005773948206tt1tt158

18636005773948206tt158
type: Position
type: ExactPosition
position: 158
reference: B5Y805-1

SIP75F832E3759B7F81
type: Domain Extent Annotation
comment: OBG-type G
range: 18636005773948206tt159tt328

18636005773948206tt159
type: Position
type: ExactPosition
position: 159
reference: B5Y805-1

18636005773948206tt328
type: Position
type: ExactPosition
position: 328
reference: B5Y805-1

SIP186D9757628E81C4
type: Domain Extent Annotation
comment: OCT
range: 18636005773948206tt344tt419

18636005773948206tt344
type: Position
type: ExactPosition
position: 344
reference: B5Y805-1

18636005773948206tt165
type: Position
type: ExactPosition
position: 165
reference: B5Y805-1

18636005773948206tt172
type: Position
type: ExactPosition
position: 172
reference: B5Y805-1

18636005773948206tt190
type: Position
type: ExactPosition
position: 190
reference: B5Y805-1

18636005773948206tt194
type: Position
type: ExactPosition
position: 194
reference: B5Y805-1

18636005773948206tt192
type: Position
type: ExactPosition
position: 192
reference: B5Y805-1

18636005773948206tt211
type: Position
type: ExactPosition
position: 211
reference: B5Y805-1

18636005773948206tt214
type: Position
type: ExactPosition
position: 214
reference: B5Y805-1

18636005773948206tt281
type: Position
type: ExactPosition
position: 281
reference: B5Y805-1

18636005773948206tt284
type: Position
type: ExactPosition
position: 284
reference: B5Y805-1

18636005773948206tt309
type: Position
type: ExactPosition
position: 309
reference: B5Y805-1

18636005773948206tt311
type: Position
type: ExactPosition
position: 311
reference: B5Y805-1

B5Y805-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 46625
value: MIFIDTAEIIVYGGKGGDGAASFRREKFIEKGGPDGGDGGKGGDVYLVTDPALLTLYDFKYQKEFRAEDGEPGRSQKQFGKDGKDLFIRIPVGVIVADLETQTVVDMDKPGMKLLVARGGRGGKGNARMATATRRAPRFRELGHEGEMRRLRLELKLVAHVGLVGLPNAGKSSLISVISKAKPEIAPYPFTTRSPVLGIVKKAEQSFVVSDVPGLIEGAHEGKGLGLTFLRHVERTKVLAIVIDAAAIDGYEPMQAYETIIGELRAYNPNLLEKPRVLVLNKIDLLQPEHIDQLKVQFADKESHVVLTSAATGEGTNQLVDVLFELISPTLSTEEPTAEFMTMELPPLPEDFSIRREDEYWVVEGRWARYISRYDTTQPWDFQYVQREIRRKKLEEMLRQMGAKEGETVVIHDKAFEIL

http://purl.uniprot.org/uniprot/B5Y805#attribution-CA55A6D082E74FEDCDF6D0E52041874D
manual: true
evidence: ECO_0000255
source: MF_01454

http://purl.uniprot.org/uniprot/B5Y805#attribution-2F6CCA153DA6DC3BA011659F6470DA1F
manual: true
evidence: ECO_0000255
source: PRU01229

http://purl.uniprot.org/uniprot/B5Y805#attribution-7650C0E2CBEE34285196D431E2D25EA6
manual: true
evidence: ECO_0000255
source: PRU01231

B5Y863
type: Protein
reviewed: true
created: 2009-03-24
modified: 2023-02-22
version: 76
mnemonic: PANC_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP9D963CB3F4807F35
alternative name: SIPEB3B39D183590639
alternative name: SIPDE2CA4D6DE1E7E69
enzyme: http://purl.uniprot.org/enzyme/6.3.2.1
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP4295116B2EBBCFFD
annotation: SIP9ABD7BA05CBB9683
annotation: SIP75CFC1F67741E1A3
annotation: SIP4C74EBD02A1EF0FA
annotation: SIPF8B983B9A31D62A0
annotation: SIP0A84C12879884FAC
annotation: SIPC872CFFBB320D483
annotation: PRO_1000097052
annotation: SIPDB7D1202D1772DAC
annotation: SIPE43E129096A39209
annotation: SIP8E125C5BFF22994F
annotation: SIP06B3836448E498CB
annotation: SIP16B423FE3085A2A4
annotation: SIPC22C52FF47B15AA2
annotation: SIPA104D514DE443432
annotation: SIP8748419349541334
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/436
classified with: http://purl.uniprot.org/keywords/566
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005737
classified with: GO_0005524
classified with: GO_0004592
classified with: GO_0015940
sequence: B5Y863-1
proteome: Chromosome

B5Y863-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0414
type: Resource
database: eggNOG
comment: Bacteria

cd00560
type: Resource
database: CDD
comment: PanC
signature sequence match: CDD cd00560 match 1

http://purl.uniprot.org/gene3d/3.30.1300.10
type: Resource
database: Gene3D
comment: Pantoate-beta-alanine ligase, C-terminal domain
signature sequence match: Gene3D 3.30.1300.10 match 1

MF_00158
type: Resource
database: HAMAP
comment: PanC
signature sequence match: HAMAP MF 00158 match 1

IPR003721
type: Resource
database: InterPro
comment: Pantoate_ligase

IPR042176
type: Resource
database: InterPro
comment: Pantoate_ligase_C

PTHR21299
type: Resource
database: PANTHER
comment: CYTIDYLATE KINASE/PANTOATE-BETA-ALANINE LIGASE
signature sequence match: PANTHER PTHR21299 match 1

PTHR21299:SF1
type: Resource
database: PANTHER
comment: PANTOATE--BETA-ALANINE LIGASE
signature sequence match: PANTHER PTHR21299:SF1 match 1

PF02569
type: Resource
database: Pfam
comment: Pantoate_ligase
signature sequence match: Pfam PF02569 match 1

TIGR00018
type: Resource
database: TIGRFAMs
comment: panC
signature sequence match: TIGRFAMs TIGR00018 match 1

SIP9D963CB3F4807F35
type: Structured Name
full name: Pantothenate synthetase
short name: PS
ec name: 6.3.2.1

SIPEB3B39D183590639
type: Structured Name
full name: Pantoate--beta-alanine ligase

SIPDE2CA4D6DE1E7E69
type: Structured Name
full name: Pantoate-activating enzyme

panC
type: Gene
locus name: COPRO5265_0605

SIP4295116B2EBBCFFD
type: Function Annotation
comment: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate.

SIP4C74EBD02A1EF0FA
type: Subunit Annotation
comment: Homodimer.

SIP0A84C12879884FAC
type: Annotation
comment: The reaction proceeds by a bi uni uni bi ping pong mechanism.

SIPC872CFFBB320D483
type: Similarity Annotation
comment: Belongs to the pantothenate synthetase family.

PRO_1000097052
type: Chain Annotation
comment: Pantothenate synthetase
mass: 32605
range: 18636005774340910tt1tt287

18636005774340910tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y863-1

18636005774340910tt287
type: Position
type: ExactPosition
position: 287
reference: B5Y863-1

SIPDB7D1202D1772DAC
type: Active Site Annotation
comment: Proton donor
range: 18636005774340910tt37tt37

18636005774340910tt37
type: Position
type: ExactPosition
position: 37
reference: B5Y863-1

18636005774340910tt30
type: Position
type: ExactPosition
position: 30
reference: B5Y863-1

18636005774340910tt61
type: Position
type: ExactPosition
position: 61
reference: B5Y863-1

18636005774340910tt150
type: Position
type: ExactPosition
position: 150
reference: B5Y863-1

18636005774340910tt153
type: Position
type: ExactPosition
position: 153
reference: B5Y863-1

18636005774340910tt156
type: Position
type: ExactPosition
position: 156
reference: B5Y863-1

18636005774340910tt179
type: Position
type: ExactPosition
position: 179
reference: B5Y863-1

18636005774340910tt187
type: Position
type: ExactPosition
position: 187
reference: B5Y863-1

18636005774340910tt190
type: Position
type: ExactPosition
position: 190
reference: B5Y863-1

B5Y863-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 32605
value: MEIVRDIKTMREKVAEMKRQGKSVGLVPTMGYLHEGHLALIDTARKENDVVVVSDFVNPLQFGPNEDYLVYPRDMDRDAQLCSEHGVDFLFVPTVEEMYPKKGNQVDVFVDVKHLDENLCGRFRPGHFRGVVTVVTKLFNIVSPNRAYFGMKDIQQLRIIEEMVNDLNMNIEIVPVPTVREPSGLALSSRNTYLSAEEREKAASIYKSLLMAKDLILEKGVISTAEVIGTCTRFLSQQGFKVQYFQLVDYDTLELLPKIEPPQKIIIATAVFLGKVRLIDNLVIEVR

http://purl.uniprot.org/uniprot/B5Y863#attribution-625F1820351D55C56936092174245B6A
manual: true
evidence: ECO_0000255
source: MF_00158

B5Y862
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 75
mnemonic: PAND_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPB10BFE6183EB48A5
alternative name: SIP79FB7EEA55221A45
enzyme: http://purl.uniprot.org/enzyme/4.1.1.11
component: SIP1B473EB04A933FFE
component: SIP964C5AE500EF0BC0
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP4B3A0127CCEF6B65
annotation: SIP8062B12293751440
annotation: SIPB8DAA5275F635A59
annotation: SIPF889FDF1D465C0DA
annotation: SIP612EDAACB6B6181A
annotation: SIPBE89AE38F8F071DC
annotation: SIPF1E5FCDC5FB15040
annotation: SIP662FEBE8CD288598
annotation: PRO_1000191964
annotation: PRO_1000191965
annotation: SIP44B657A21E6F0AD8
annotation: SIP9821396D3D425F3B
annotation: SIP43BF7166C301808F
annotation: SIP3E940B71B2AD487D
annotation: SIP2C5C7EF35F9F11CE
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/68
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/210
classified with: http://purl.uniprot.org/keywords/566
classified with: http://purl.uniprot.org/keywords/670
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/704
classified with: http://purl.uniprot.org/keywords/865
classified with: GO_0005737
classified with: GO_0004068
classified with: GO_0006523
classified with: GO_0015940
sequence: MLITVLKSKIHNARVTVCNVDYEGSLSLDEELIKQANLRPYEKVLVANVTNGERFETYIIPAPANSREVGLNGAAARSAVVGDRVIVMAFAMKEPDEEVDTTVLIMDEENNIKEVKKLKA
proteome: Chromosome

B5Y862-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0853
type: Resource
database: eggNOG
comment: Bacteria

cd06919
type: Resource
database: CDD
comment: Asp_decarbox
signature sequence match: CDD cd06919 match 1

MF_00446
type: Resource
database: HAMAP
comment: PanD
signature sequence match: HAMAP MF 00446 match 1

IPR009010
type: Resource
database: InterPro
comment: Asp_de-COase-like_dom_sf

IPR003190
type: Resource
database: InterPro
comment: Asp_decarbox

PTHR21012
type: Resource
database: PANTHER
comment: ASPARTATE 1-DECARBOXYLASE
signature sequence match: PANTHER PTHR21012 match 1

PTHR21012:SF0
type: Resource
database: PANTHER
comment: ASPARTATE 1-DECARBOXYLASE
signature sequence match: PANTHER PTHR21012:SF0 match 1

PF02261
type: Resource
database: Pfam
comment: Asp_decarbox
signature sequence match: Pfam PF02261 match 1

PIRSF006246
type: Resource
database: PIRSF
comment: Asp_decarbox
signature sequence match: PIRSF PIRSF006246 match 1

SSF50692
type: Resource
database: SUPFAM
comment: ADC-like
signature sequence match: SUPFAM SSF50692 match 1

TIGR00223
type: Resource
database: TIGRFAMs
comment: panD
signature sequence match: TIGRFAMs TIGR00223 match 1

SIPB10BFE6183EB48A5
type: Structured Name
full name: Aspartate 1-decarboxylase
ec name: 4.1.1.11

SIP79FB7EEA55221A45
type: Structured Name
full name: Aspartate alpha-decarboxylase

SIPAE11D3F66809737F
type: Structured Name
full name: Aspartate 1-decarboxylase beta chain

SIPE9CC4BDD17A290D7
type: Structured Name
full name: Aspartate 1-decarboxylase alpha chain

panD
type: Gene
locus name: COPRO5265_0604

SIP4B3A0127CCEF6B65
type: Function Annotation
comment: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.

SIPB8DAA5275F635A59
type: Cofactor Annotation
comment: Binds 1 pyruvoyl group covalently per subunit.
cofactor: CHEBI_15361

SIP612EDAACB6B6181A
type: Subunit Annotation
comment: Heterooctamer of four alpha and four beta subunits.

SIPF1E5FCDC5FB15040
type: PTM Annotation
comment: Is synthesized initially as an inactive proenzyme, which is activated by self-cleavage at a specific serine bond to produce a beta-subunit with a hydroxyl group at its C-terminus and an alpha-subunit with a pyruvoyl group at its N-terminus.

SIP662FEBE8CD288598
type: Similarity Annotation
comment: Belongs to the PanD family.

PRO_1000191964
type: Chain Annotation
comment: Aspartate 1-decarboxylase beta chain
mass: 2704
range: 18636005774340654tt1tt24

18636005774340654tt1
type: Position
type: ExactPosition
position: 1
reference: MLITVLKSKIHNARVTVCNVDYEGSLSLDEELIKQANLRPYEKVLVANVTNGERFETYIIPAPANSREVGLNGAAARSAVVGDRVIVMAFAMKEPDEEVDTTVLIMDEENNIKEVKKLKA

18636005774340654tt24
type: Position
type: ExactPosition
position: 24
reference: MLITVLKSKIHNARVTVCNVDYEGSLSLDEELIKQANLRPYEKVLVANVTNGERFETYIIPAPANSREVGLNGAAARSAVVGDRVIVMAFAMKEPDEEVDTTVLIMDEENNIKEVKKLKA

PRO_1000191965
type: Chain Annotation
comment: Aspartate 1-decarboxylase alpha chain
mass: 10588
range: 18636005774340654tt25tt120

18636005774340654tt25
type: Position
type: ExactPosition
position: 25
reference: MLITVLKSKIHNARVTVCNVDYEGSLSLDEELIKQANLRPYEKVLVANVTNGERFETYIIPAPANSREVGLNGAAARSAVVGDRVIVMAFAMKEPDEEVDTTVLIMDEENNIKEVKKLKA

18636005774340654tt120
type: Position
type: ExactPosition
position: 120
reference: MLITVLKSKIHNARVTVCNVDYEGSLSLDEELIKQANLRPYEKVLVANVTNGERFETYIIPAPANSREVGLNGAAARSAVVGDRVIVMAFAMKEPDEEVDTTVLIMDEENNIKEVKKLKA

SIP44B657A21E6F0AD8
type: Active Site Annotation
comment: Schiff-base intermediate with substrate; via pyruvic acid
range: 18636005774340654tt25tt25

SIP9821396D3D425F3B
type: Active Site Annotation
comment: Proton donor
range: 18636005774340654tt58tt58

18636005774340654tt58
type: Position
type: ExactPosition
position: 58
reference: MLITVLKSKIHNARVTVCNVDYEGSLSLDEELIKQANLRPYEKVLVANVTNGERFETYIIPAPANSREVGLNGAAARSAVVGDRVIVMAFAMKEPDEEVDTTVLIMDEENNIKEVKKLKA

18636005774340654tt57
type: Position
type: ExactPosition
position: 57
reference: MLITVLKSKIHNARVTVCNVDYEGSLSLDEELIKQANLRPYEKVLVANVTNGERFETYIIPAPANSREVGLNGAAARSAVVGDRVIVMAFAMKEPDEEVDTTVLIMDEENNIKEVKKLKA

18636005774340654tt73
type: Position
type: ExactPosition
position: 73
reference: MLITVLKSKIHNARVTVCNVDYEGSLSLDEELIKQANLRPYEKVLVANVTNGERFETYIIPAPANSREVGLNGAAARSAVVGDRVIVMAFAMKEPDEEVDTTVLIMDEENNIKEVKKLKA

18636005774340654tt75
type: Position
type: ExactPosition
position: 75
reference: MLITVLKSKIHNARVTVCNVDYEGSLSLDEELIKQANLRPYEKVLVANVTNGERFETYIIPAPANSREVGLNGAAARSAVVGDRVIVMAFAMKEPDEEVDTTVLIMDEENNIKEVKKLKA

SIP2C5C7EF35F9F11CE
type: Modified Residue Annotation
comment: Pyruvic acid (Ser)
range: 18636005774340654tt25tt25

substrate

MLITVLKSKIHNARVTVCNVDYEGSLSLDEELIKQANLRPYEKVLVANVTNGERFETYIIPAPANSREVGLNGAAARSAVVGDRVIVMAFAMKEPDEEVDTTVLIMDEENNIKEVKKLKA
type: Simple Sequence
modified: 2008-11-25
version: 1
precursor: true
mass: 13274

http://purl.uniprot.org/uniprot/B5Y862#attribution-1C35B1AAFBC7AD87B898039D170B9A93
manual: true
evidence: ECO_0000255
source: MF_00446

B5Y5X6
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 75
mnemonic: PCP_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPD7663670220827D6
alternative name: SIPBB3907EC04E71FB2
alternative name: SIPD9CB2F7517ABE791
enzyme: http://purl.uniprot.org/enzyme/3.4.19.3
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP703CB30A4EF325D0
annotation: SIP2330F2376FB8448F
annotation: SIP1EB5DCAA1ACEE84D
annotation: SIP080D1234F385F20C
annotation: SIPF10CF7A3D068A1DC
annotation: PRO_1000123993
annotation: SIP8C89A80B288CA805
annotation: SIPF9088A9195D84F1C
annotation: SIP34C5541D1E20FFAF
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/788
classified with: GO_0005829
classified with: GO_0016920
classified with: GO_0006508
sequence: B5Y5X6-1
proteome: Chromosome

B5Y5X6-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG2039
type: Resource
database: eggNOG
comment: Bacteria

cd00501
type: Resource
database: CDD
comment: Peptidase_C15
signature sequence match: CDD cd00501 match 1

http://purl.uniprot.org/gene3d/3.40.630.20
type: Resource
database: Gene3D
comment: Peptidase C15, pyroglutamyl peptidase I-like
signature sequence match: Gene3D 3.40.630.20 match 1

MF_00417
type: Resource
database: HAMAP
comment: Pyrrolid_peptidase
signature sequence match: HAMAP MF 00417 match 1

IPR000816
type: Resource
database: InterPro
comment: Peptidase_C15

IPR016125
type: Resource
database: InterPro
comment: Peptidase_C15-like

IPR036440
type: Resource
database: InterPro
comment: Peptidase_C15-like_sf

IPR029762
type: Resource
database: InterPro
comment: PGP-I_bact-type

IPR033693
type: Resource
database: InterPro
comment: PGPEP1_Glu_AS

PTHR23402
type: Resource
database: PANTHER
comment: PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED
signature sequence match: PANTHER PTHR23402 match 1

PTHR23402:SF1
type: Resource
database: PANTHER
comment: RE07960P
signature sequence match: PANTHER PTHR23402:SF1 match 1

PF01470
type: Resource
database: Pfam
comment: Peptidase_C15
signature sequence match: Pfam PF01470 match 1

PIRSF015592
type: Resource
database: PIRSF
comment: Prld-crbxl_pptds
signature sequence match: PIRSF PIRSF015592 match 1

PR00706
type: Resource
database: PRINTS
comment: PYROGLUPTASE

SSF53182
type: Resource
database: SUPFAM
comment: Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
signature sequence match: SUPFAM SSF53182 match 1

TIGR00504
type: Resource
database: TIGRFAMs
comment: pyro_pdase
signature sequence match: TIGRFAMs TIGR00504 match 1

PS01333
type: Resource
database: PROSITE
comment: PYRASE_GLU
signature sequence match: PROSITE PS01333 match 1

SIPD7663670220827D6
type: Structured Name
full name: Pyrrolidone-carboxylate peptidase
ec name: 3.4.19.3

SIPBB3907EC04E71FB2
type: Structured Name
full name: 5-oxoprolyl-peptidase

SIPD9CB2F7517ABE791
type: Structured Name
full name: Pyroglutamyl-peptidase I
short name: PGP-I
short name: Pyrase

pcp
type: Gene
locus name: COPRO5265_1354

SIP703CB30A4EF325D0
type: Function Annotation
comment: Removes 5-oxoproline from various penultimate amino acid residues except L-proline.

SIP1EB5DCAA1ACEE84D
type: Subunit Annotation
comment: Homotetramer.

SIPF10CF7A3D068A1DC
type: Similarity Annotation
comment: Belongs to the peptidase C15 family.

PRO_1000123993
type: Chain Annotation
comment: Pyrrolidone-carboxylate peptidase
mass: 22204
range: 18636005726238254tt1tt207

18636005726238254tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y5X6-1

18636005726238254tt207
type: Position
type: ExactPosition
position: 207
reference: B5Y5X6-1

18636005726238254tt80
type: Position
type: ExactPosition
position: 80
reference: B5Y5X6-1

18636005726238254tt143
type: Position
type: ExactPosition
position: 143
reference: B5Y5X6-1

18636005726238254tt167
type: Position
type: ExactPosition
position: 167
reference: B5Y5X6-1

B5Y5X6-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 22204
value: MSRILLTGFEPFGGEKVNPSELAVKQLEGKTIAGLEVVAGVLPVVTVKCIDEAVKLIEKYEPVAVLNVGQAGGRVELSIEKVAINVKDYRIPDNEGNQIRYAPVVEGGPDAYFATIPVEKIADSLVEKVIPASVSYTAGTYCCNEVFYGVSHYLRNNKPGVLNGFIHIPFILEQAAGAKPPRASMPLEVIVKGLEIAVEVVAEGLEK

http://purl.uniprot.org/uniprot/B5Y5X6#attribution-3F13023A9BCD81BED1346878DBF2C3E4
manual: true
evidence: ECO_0000255
source: MF_00417

B5Y8I0
type: Protein
reviewed: true
created: 2009-03-24
modified: 2023-05-03
version: 71
mnemonic: PGK_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP59357C0F4F7DE683
enzyme: http://purl.uniprot.org/enzyme/2.7.2.3
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP3933A9568E7E0F2A
annotation: SIPE9C63F2A73549234
annotation: SIPB52649CF1D185F8F
annotation: SIPD735CB86067A3685
annotation: SIPBC925D04FF238AF2
annotation: PRO_1000096334
annotation: SIP484F31F185CB23C0
annotation: SIP31E66D655B7DEA80
annotation: SIPCBF864331CAE75FD
annotation: SIPCA7D42FA5A297983
annotation: SIPE3AF0E5B1AB71370
annotation: SIP3710832F195EDD7B
annotation: SIP5F7B4DFF4742F62D
annotation: SIP5F2D99FEE49F0717
annotation: SIP1D941177B1360B0A
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/324
classified with: http://purl.uniprot.org/keywords/418
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005737
classified with: GO_0005524
classified with: GO_0004618
classified with: GO_0006096
classified with: GO_0016310
sequence: B5Y8I0-1
proteome: Chromosome

B5Y8I0-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0126
type: Resource
database: eggNOG
comment: Bacteria

http://purl.uniprot.org/gene3d/3.40.50.1260
type: Resource
database: Gene3D
comment: Phosphoglycerate kinase, N-terminal domain
signature sequence match: Gene3D 3.40.50.1260 match 1
signature sequence match: Gene3D 3.40.50.1260 match 2

MF_00145
type: Resource
database: HAMAP
comment: Phosphoglyc_kinase
signature sequence match: HAMAP MF 00145 match 1

IPR001576
type: Resource
database: InterPro
comment: Phosphoglycerate_kinase

IPR015911
type: Resource
database: InterPro
comment: Phosphoglycerate_kinase_CS

IPR015824
type: Resource
database: InterPro
comment: Phosphoglycerate_kinase_N

IPR036043
type: Resource
database: InterPro
comment: Phosphoglycerate_kinase_sf

PTHR11406
type: Resource
database: PANTHER
comment: PHOSPHOGLYCERATE KINASE
signature sequence match: PANTHER PTHR11406 match 1

PTHR11406:SF23
type: Resource
database: PANTHER
comment: PHOSPHOGLYCERATE KINASE 1, CHLOROPLASTIC-RELATED
signature sequence match: PANTHER PTHR11406:SF23 match 1

PF00162
type: Resource
database: Pfam
comment: PGK
signature sequence match: Pfam PF00162 match 1

PIRSF000724
type: Resource
database: PIRSF
comment: Pgk
signature sequence match: PIRSF PIRSF000724 match 1

PR00477
type: Resource
database: PRINTS
comment: PHGLYCKINASE

SSF53748
type: Resource
database: SUPFAM
comment: Phosphoglycerate kinase
signature sequence match: SUPFAM SSF53748 match 1

PS00111
type: Resource
database: PROSITE
comment: PGLYCERATE_KINASE
signature sequence match: PROSITE PS00111 match 1

SIP59357C0F4F7DE683
type: Structured Name
full name: Phosphoglycerate kinase
ec name: 2.7.2.3

pgk
type: Gene
locus name: COPRO5265_0729

SIPB52649CF1D185F8F
type: Subunit Annotation
comment: Monomer.

SIPBC925D04FF238AF2
type: Similarity Annotation
comment: Belongs to the phosphoglycerate kinase family.

PRO_1000096334
type: Chain Annotation
comment: Phosphoglycerate kinase
mass: 42974
range: 18636005775585326tt1tt393

18636005775585326tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y8I0-1

18636005775585326tt393
type: Position
type: ExactPosition
position: 393
reference: B5Y8I0-1

18636005775585326tt21
type: Position
type: ExactPosition
position: 21
reference: B5Y8I0-1

18636005775585326tt23
type: Position
type: ExactPosition
position: 23
reference: B5Y8I0-1

18636005775585326tt37
type: Position
type: ExactPosition
position: 37
reference: B5Y8I0-1

18636005775585326tt60
type: Position
type: ExactPosition
position: 60
reference: B5Y8I0-1

18636005775585326tt63
type: Position
type: ExactPosition
position: 63
reference: B5Y8I0-1

18636005775585326tt119
type: Position
type: ExactPosition
position: 119
reference: B5Y8I0-1

18636005775585326tt152
type: Position
type: ExactPosition
position: 152
reference: B5Y8I0-1

18636005775585326tt202
type: Position
type: ExactPosition
position: 202
reference: B5Y8I0-1

18636005775585326tt291
type: Position
type: ExactPosition
position: 291
reference: B5Y8I0-1

18636005775585326tt322
type: Position
type: ExactPosition
position: 322
reference: B5Y8I0-1

18636005775585326tt348
type: Position
type: ExactPosition
position: 348
reference: B5Y8I0-1

18636005775585326tt351
type: Position
type: ExactPosition
position: 351
reference: B5Y8I0-1

substrate

B5Y8I0-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 42974
value: MKLRSIRDAEVRNKRVIVRVDFNVPLDAEGNVVDDFRIRAALPTIEYLVENGAKVILISHLGRPKGKRDKKYSLVGVAKRLAELLHKEILFAPDVVGEEVELAVNGLRSGDILLCENVRFHEEEEKNDAEFAKNIASLGEIFVNDAFSASHRAHATVEGITKFLPSYAGFLMEKEVNYLSMLTENPQRPYYLVLGGAKVSDKVALLQNLLPKVDGMVIGGAMVFTFWKAQGKEIGKSIVEDDLVGFAKELLEQATTQNKEIVLAKDFVVADENKEHVEIKAISDFGPADIGYDIGPESIKEFKNALVKARTVFWNGPLGLFEDAKFAEGTKQVGAFLADFPGTVVVGGGDTANAVREMELFEKFAHVSTGGGASLEFLEGKVLPGIAPLVVEG

http://purl.uniprot.org/uniprot/B5Y8I0#attribution-7B4479559A60A28F8F76BE746BAE7525
manual: true
evidence: ECO_0000255
source: MF_00145

B5Y8I4
type: Protein
reviewed: true
created: 2009-09-01
modified: 2023-05-03
version: 83
mnemonic: PNP_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP1975DD6B13D88AA0
alternative name: SIP9C50E15438F826F0
enzyme: http://purl.uniprot.org/enzyme/2.7.7.8
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP1FC2378A07BDE6A5
annotation: SIP07137E64D0FB475E
annotation: SIP5AFC024F0DBE87E0
annotation: SIP5B55066DB392F60B
annotation: SIPF2FE4BC2776692A0
annotation: PRO_0000381878
annotation: SIP657E12149B452EAB
annotation: SIPE38C8CDEFC27E2C6
annotation: SIP6D2D673946F8BCC8
annotation: SIP101F8B71B895CC52
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/460
classified with: http://purl.uniprot.org/keywords/479
classified with: http://purl.uniprot.org/keywords/548
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/694
classified with: GO_0005737
classified with: GO_0000287
classified with: GO_0004654
classified with: GO_0003723
classified with: GO_0006402
classified with: GO_0006396
sequence: B5Y8I4-1
proteome: Chromosome

B5Y8I4-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

cd02393
type: Resource
database: CDD
comment: KH-I_PNPase
signature sequence match: CDD cd02393 match 1

cd11363
type: Resource
database: CDD
comment: RNase_PH_PNPase_1
signature sequence match: CDD cd11363 match 1

cd11364
type: Resource
database: CDD
comment: RNase_PH_PNPase_2
signature sequence match: CDD cd11364 match 1

http://purl.uniprot.org/gene3d/3.30.230.70
type: Resource
database: Gene3D
comment: GHMP Kinase, N-terminal domain
signature sequence match: Gene3D 3.30.230.70 match 1
signature sequence match: Gene3D 3.30.230.70 match 2

http://purl.uniprot.org/gene3d/3.30.1370.10
type: Resource
database: Gene3D
comment: K Homology domain, type 1
signature sequence match: Gene3D 3.30.1370.10 match 1

MF_01595
type: Resource
database: HAMAP
comment: PNPase
signature sequence match: HAMAP MF 01595 match 1

IPR001247
type: Resource
database: InterPro
comment: ExoRNase_PH_dom1

IPR015847
type: Resource
database: InterPro
comment: ExoRNase_PH_dom2

IPR036345
type: Resource
database: InterPro
comment: ExoRNase_PH_dom2_sf

IPR004087
type: Resource
database: InterPro
comment: KH_dom

IPR004088
type: Resource
database: InterPro
comment: KH_dom_type_1

IPR036612
type: Resource
database: InterPro
comment: KH_dom_type_1_sf

IPR012162
type: Resource
database: InterPro
comment: PNPase

IPR027408
type: Resource
database: InterPro
comment: PNPase/RNase_PH_dom_sf

IPR015848
type: Resource
database: InterPro
comment: PNPase_PH_RNA-bd_bac/org-type

IPR022967
type: Resource
database: InterPro
comment: S1_dom

IPR003029
type: Resource
database: InterPro
comment: S1_domain

PTHR11252
type: Resource
database: PANTHER
comment: POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE
signature sequence match: PANTHER PTHR11252 match 1

PTHR11252:SF0
type: Resource
database: PANTHER
comment: POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIAL
signature sequence match: PANTHER PTHR11252:SF0 match 1

PF00013
type: Resource
database: Pfam
comment: KH_1
signature sequence match: Pfam PF00013 match 1

PF03726
type: Resource
database: Pfam
comment: PNPase
signature sequence match: Pfam PF03726 match 1

PF01138
type: Resource
database: Pfam
comment: RNase_PH
signature sequence match: Pfam PF01138 match 1
signature sequence match: Pfam PF01138 match 2

PF03725
type: Resource
database: Pfam
comment: RNase_PH_C
signature sequence match: Pfam PF03725 match 1
signature sequence match: Pfam PF03725 match 2

PF00575
type: Resource
database: Pfam
comment: S1
signature sequence match: Pfam PF00575 match 1

PIRSF005499
type: Resource
database: PIRSF
comment: PNPase
signature sequence match: PIRSF PIRSF005499 match 1

SM00322
type: Resource
database: SMART
comment: KH
signature sequence match: SMART SM00322 match 1

SM00316
type: Resource
database: SMART
comment: S1
signature sequence match: SMART SM00316 match 1

SSF54791
type: Resource
database: SUPFAM
comment: Eukaryotic type KH-domain (KH-domain type I)
signature sequence match: SUPFAM SSF54791 match 1

SSF55666
type: Resource
database: SUPFAM
comment: Ribonuclease PH domain 2-like
signature sequence match: SUPFAM SSF55666 match 1
signature sequence match: SUPFAM SSF55666 match 2

TIGR03591
type: Resource
database: TIGRFAMs
comment: polynuc_phos
signature sequence match: TIGRFAMs TIGR03591 match 1

PS50084
type: Resource
database: PROSITE
comment: KH_TYPE_1
signature sequence match: PROSITE PS50084 match 1

PS50126
type: Resource
database: PROSITE
comment: S1
signature sequence match: PROSITE PS50126 match 1

SIP1975DD6B13D88AA0
type: Structured Name
full name: Polyribonucleotide nucleotidyltransferase
ec name: 2.7.7.8

SIP9C50E15438F826F0
type: Structured Name
full name: Polynucleotide phosphorylase
short name: PNPase

pnp
type: Gene
locus name: COPRO5265_0733

SIP1FC2378A07BDE6A5
type: Function Annotation
comment: Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction.

SIPF2FE4BC2776692A0
type: Similarity Annotation
comment: Belongs to the polyribonucleotide nucleotidyltransferase family.

PRO_0000381878
type: Chain Annotation
comment: Polyribonucleotide nucleotidyltransferase
mass: 76623
range: 18636005775586350tt1tt697

18636005775586350tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y8I4-1

18636005775586350tt697
type: Position
type: ExactPosition
position: 697
reference: B5Y8I4-1

SIP657E12149B452EAB
type: Domain Extent Annotation
comment: KH
range: 18636005775586350tt553tt612

18636005775586350tt553
type: Position
type: ExactPosition
position: 553
reference: B5Y8I4-1

18636005775586350tt612
type: Position
type: ExactPosition
position: 612
reference: B5Y8I4-1

SIPE38C8CDEFC27E2C6
type: Domain Extent Annotation
comment: S1 motif
range: 18636005775586350tt622tt690

18636005775586350tt622
type: Position
type: ExactPosition
position: 622
reference: B5Y8I4-1

18636005775586350tt690
type: Position
type: ExactPosition
position: 690
reference: B5Y8I4-1

18636005775586350tt487
type: Position
type: ExactPosition
position: 487
reference: B5Y8I4-1

18636005775586350tt493
type: Position
type: ExactPosition
position: 493
reference: B5Y8I4-1

B5Y8I4-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 76623
value: MIERKKIEVTGTVAGKKVIFQSGFLALQANGAVLARFGDTVALSTVLMSSEPKLDIDFFPLTVDYEEKSYAVGKIPGGFFKKEGRPTDMEILKARLIDRSIRPMFPDGMRNEVQVLNMILAADMENPPDIVALNGTAAALAVSDIPIPELIAGVRVGYIDGEYVLNPTFAEMSESQLDLVVAGTRDSIVMIEAGAAEVDKSILIGGLKFAQEGIRQIIDLIAELKEKVGRPKAEITVVSFPQEQLDFMRNHEDRFRAALITPIKQERERAVSELKKALFQEMLEVFPDLDEAMFNLMFGEVEKEVVRAYMKSTRKRVDGRAFDEIRPLYAESSVLPKVHGSGLFIRGQTQVLSTVTLGSFSDVQFIDAIGLEEFKRFMHQYDFPPFSTGEVKPRRGPSRREIGHGALVERALSYLIPSEEVFPYTIRVVSEVLESNGSTSMASTCASSIALMSAGVPMARHVGGIAMGLIEYNDENVVLTDIQGLEDHLGDMDFKVAGTREGITALQLDVKVKGISVETLDKAIDQAEVARSKILDVLYDAIPSPRPLSETAPRIVKIEIPVDKIGEVIGPGGRNVKRITQETGATIDIREDGVAFVKGLTDESVNMAKQQVEMIVKDPEVGEELTARVVRVTPSYAIVEIAPGKTGLLHVSEVSETRIRSLEDVLSVGQTIKVWVKEKDGEGRLRFSAKEKKSEAH

http://purl.uniprot.org/uniprot/B5Y8I4#attribution-D4CDD9B331F78B06E96C4B6681B4EC3A
manual: true
evidence: ECO_0000255
source: MF_01595

B5Y6G9
type: Protein
reviewed: true
created: 2010-01-19
modified: 2023-02-22
version: 63
mnemonic: PSUG_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPE3A48FA24AE8EA69
enzyme: http://purl.uniprot.org/enzyme/4.2.1.70
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP0398C2D667F2919A
annotation: SIP242170C279B6E4DF
annotation: SIP4CD346F6E55A5B49
annotation: SIP0373E8A07B74BAC8
annotation: SIP1A607A4DB31FA28B
annotation: PRO_0000390513
annotation: SIP8F32C6AF89CEDA17
annotation: SIP9AFCAF94FA72DD6A
annotation: SIPE6C476D2ED506C61
annotation: SIP62E35DD42CA346BA
annotation: SIP2D0E86F5C69EA4CD
annotation: SIP89BEE6D64470E29E
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/326
classified with: http://purl.uniprot.org/keywords/456
classified with: http://purl.uniprot.org/keywords/464
classified with: http://purl.uniprot.org/keywords/479
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0016798
classified with: GO_0046872
classified with: GO_0004730
classified with: GO_0046113
sequence: B5Y6G9-1
proteome: Chromosome

B5Y6G9-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG2313
type: Resource
database: eggNOG
comment: Bacteria

http://purl.uniprot.org/gene3d/3.40.1790.10
type: Resource
database: Gene3D
comment: Indigoidine synthase domain
signature sequence match: Gene3D 3.40.1790.10 match 1

MF_01876
type: Resource
database: HAMAP
comment: PsiMP_glycosidase
signature sequence match: HAMAP MF 01876 match 1

IPR022830
type: Resource
database: InterPro
comment: Indigdn_synthA-like

IPR007342
type: Resource
database: InterPro
comment: PsuG

PTHR42909:SF1
type: Resource
database: PANTHER
comment: PFKB DOMAIN-CONTAINING PROTEIN
signature sequence match: PANTHER PTHR42909:SF1 match 1

PTHR42909
type: Resource
database: PANTHER
comment: ZGC:136858
signature sequence match: PANTHER PTHR42909 match 1

PF04227
type: Resource
database: Pfam
comment: Indigoidine_A
signature sequence match: Pfam PF04227 match 1

SSF110581
type: Resource
database: SUPFAM
comment: Indigoidine synthase A-like
signature sequence match: SUPFAM SSF110581 match 1

SIPE3A48FA24AE8EA69
type: Structured Name
full name: Pseudouridine-5'-phosphate glycosidase
short name: PsiMP glycosidase
ec name: 4.2.1.70

psuG
type: Gene
locus name: COPRO5265_1592

SIP0398C2D667F2919A
type: Function Annotation
comment: Catalyzes the reversible cleavage of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway.

SIP4CD346F6E55A5B49
type: Cofactor Annotation
comment: Binds 1 Mn(2+) ion per subunit.
cofactor: CHEBI_29035

SIP0373E8A07B74BAC8
type: Subunit Annotation
comment: Homotrimer.

SIP1A607A4DB31FA28B
type: Similarity Annotation
comment: Belongs to the pseudouridine-5'-phosphate glycosidase family.

PRO_0000390513
type: Chain Annotation
comment: Pseudouridine-5'-phosphate glycosidase
mass: 32113
range: 18636005741902126tt1tt302

18636005741902126tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y6G9-1

18636005741902126tt302
type: Position
type: ExactPosition
position: 302
reference: B5Y6G9-1

SIP8F32C6AF89CEDA17
type: Active Site Annotation
comment: Proton donor
range: 18636005741902126tt22tt22

18636005741902126tt22
type: Position
type: ExactPosition
position: 22
reference: B5Y6G9-1

SIP9AFCAF94FA72DD6A
type: Active Site Annotation
comment: Nucleophile
range: 18636005741902126tt156tt156

18636005741902126tt156
type: Position
type: ExactPosition
position: 156
reference: B5Y6G9-1

18636005741902126tt83
type: Position
type: ExactPosition
position: 83
reference: B5Y6G9-1

18636005741902126tt103
type: Position
type: ExactPosition
position: 103
reference: B5Y6G9-1

18636005741902126tt135
type: Position
type: ExactPosition
position: 135
reference: B5Y6G9-1

18636005741902126tt137
type: Position
type: ExactPosition
position: 137
reference: B5Y6G9-1

18636005741902126tt139
type: Position
type: ExactPosition
position: 139
reference: B5Y6G9-1

substrate

B5Y6G9-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 32113
value: MLQIAPHVKEAIETLKPVVALESTIITHGMPYPANLHTALEVEQVIKEAGAVPATIGVINGIIKVGLSEEEITYLSQAKDLHKISLKDLSVAAAKKLSGGTTVSATMFASYKAGIQVFATGGIGGVHRDARESFDVSTDLEALGSIPITVVCAGAKAILDLPATLEYLETKGVLVVGYKTDEFPAFYYGRSGLKLEHSVTTPGELAQIIRERDALEINKAILVGNPPPEEMALEKGKVEQLIEAALQQAKVNNIKGKDVTPFLLDYLAKNSKGETLETNIALVKNNAYVGSLIAKALMAAKI

http://purl.uniprot.org/uniprot/B5Y6G9#attribution-B91E721A2390E5D0360F51FEDE6BABE1
manual: true
evidence: ECO_0000255
source: MF_01876

B5Y8L1
type: Protein
reviewed: true
created: 2009-03-24
modified: 2023-05-03
version: 69
mnemonic: PTH_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPE11CBC5695DEB5A9
enzyme: http://purl.uniprot.org/enzyme/3.1.1.29
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPE127B74E73E333D7
annotation: SIPC09ED00B4209B365
annotation: SIP9498B7586FA0148E
annotation: SIPAD30B83E2E1054A2
annotation: SIPBE5892CE7416B638
annotation: PRO_1000092931
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/378
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005737
classified with: GO_0004045
classified with: GO_0006412
sequence: MLLIVGLGNPGIEYEKTRHNIGWWVLDLLRTKLTGLNLRLLCYSRVYELKHELKKEVDFIVYPLTYMNNSGKAVKCLYEPRMDLVVIHDDLDLTVGKTRVRFGGSSAGHKGVSSIIDALGTDSFWRVKVGIGRPFSKQEVINYVLGEPQKNEKEVLIRAADYIADQLCLLITDRNFSRFQQNINSFNSNENN
proteome: Chromosome

B5Y8L1-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0193
type: Resource
database: eggNOG
comment: Bacteria

cd00462
type: Resource
database: CDD
comment: PTH
signature sequence match: CDD cd00462 match 1

http://purl.uniprot.org/gene3d/3.40.50.1470
type: Resource
database: Gene3D
comment: Peptidyl-tRNA hydrolase
signature sequence match: Gene3D 3.40.50.1470 match 1

MF_00083
type: Resource
database: HAMAP
comment: Pept_tRNA_hydro_bact
signature sequence match: HAMAP MF 00083 match 1

IPR001328
type: Resource
database: InterPro
comment: Pept_tRNA_hydro

IPR018171
type: Resource
database: InterPro
comment: Pept_tRNA_hydro_CS

IPR036416
type: Resource
database: InterPro
comment: Pept_tRNA_hydro_sf

PTHR17224
type: Resource
database: PANTHER
comment: PEPTIDYL-TRNA HYDROLASE
signature sequence match: PANTHER PTHR17224 match 1

PTHR17224:SF1
type: Resource
database: PANTHER
comment: PEPTIDYL-TRNA HYDROLASE-RELATED
signature sequence match: PANTHER PTHR17224:SF1 match 1

PF01195
type: Resource
database: Pfam
comment: Pept_tRNA_hydro
signature sequence match: Pfam PF01195 match 1

SSF53178
type: Resource
database: SUPFAM
comment: Peptidyl-tRNA hydrolase-like
signature sequence match: SUPFAM SSF53178 match 1

TIGR00447
type: Resource
database: TIGRFAMs
comment: pth
signature sequence match: TIGRFAMs TIGR00447 match 1

PS01195
type: Resource
database: PROSITE
comment: PEPT_TRNA_HYDROL_1
signature sequence match: PROSITE PS01195 match 1

SIPE11CBC5695DEB5A9
type: Structured Name
full name: Peptidyl-tRNA hydrolase
short name: PTH
ec name: 3.1.1.29

pth
type: Gene
locus name: COPRO5265_0761

SIPE127B74E73E333D7
type: Function Annotation
comment: The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis.

SIP9498B7586FA0148E
type: Subunit Annotation
comment: Monomer.

SIPBE5892CE7416B638
type: Similarity Annotation
comment: Belongs to the PTH family.

PRO_1000092931
type: Chain Annotation
comment: Peptidyl-tRNA hydrolase
mass: 21936
range: 18636005775782190tt1tt192

18636005775782190tt1
type: Position
type: ExactPosition
position: 1
reference: MLLIVGLGNPGIEYEKTRHNIGWWVLDLLRTKLTGLNLRLLCYSRVYELKHELKKEVDFIVYPLTYMNNSGKAVKCLYEPRMDLVVIHDDLDLTVGKTRVRFGGSSAGHKGVSSIIDALGTDSFWRVKVGIGRPFSKQEVINYVLGEPQKNEKEVLIRAADYIADQLCLLITDRNFSRFQQNINSFNSNENN

18636005775782190tt192
type: Position
type: ExactPosition
position: 192
reference: MLLIVGLGNPGIEYEKTRHNIGWWVLDLLRTKLTGLNLRLLCYSRVYELKHELKKEVDFIVYPLTYMNNSGKAVKCLYEPRMDLVVIHDDLDLTVGKTRVRFGGSSAGHKGVSSIIDALGTDSFWRVKVGIGRPFSKQEVINYVLGEPQKNEKEVLIRAADYIADQLCLLITDRNFSRFQQNINSFNSNENN

MLLIVGLGNPGIEYEKTRHNIGWWVLDLLRTKLTGLNLRLLCYSRVYELKHELKKEVDFIVYPLTYMNNSGKAVKCLYEPRMDLVVIHDDLDLTVGKTRVRFGGSSAGHKGVSSIIDALGTDSFWRVKVGIGRPFSKQEVINYVLGEPQKNEKEVLIRAADYIADQLCLLITDRNFSRFQQNINSFNSNENN
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 21936

http://purl.uniprot.org/uniprot/B5Y8L1#attribution-554FF6EFA4ABEC76CCF0010DAD7FDEE8
manual: true
evidence: ECO_0000255
source: MF_00083

B5Y714
type: Protein
reviewed: true
created: 2009-03-24
modified: 2023-02-22
version: 74
mnemonic: PUR7_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPED1E33AC32864A85
alternative name: SIP62D4B5FC234B1D94
enzyme: http://purl.uniprot.org/enzyme/6.3.2.6
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP1ECA6AEA84E566BA
annotation: SIP4F8150BE0D31F550
annotation: SIPDB4311604804D14F
annotation: PRO_1000095977
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/436
classified with: http://purl.uniprot.org/keywords/658
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005524
classified with: GO_0004639
classified with: GO_0006189
classified with: GO_0009236
sequence: B5Y714-1
proteome: Chromosome

B5Y714-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0152
type: Resource
database: eggNOG
comment: Bacteria

cd01415
type: Resource
database: CDD
comment: SAICAR_synt_PurC
signature sequence match: CDD cd01415 match 1

MF_00137
type: Resource
database: HAMAP
comment: SAICAR_synth
signature sequence match: HAMAP MF 00137 match 1

IPR028923
type: Resource
database: InterPro
comment: SAICAR_synt/ADE2_N

IPR033934
type: Resource
database: InterPro
comment: SAICAR_synt_PurC

IPR001636
type: Resource
database: InterPro
comment: SAICAR_synth

IPR018236
type: Resource
database: InterPro
comment: SAICAR_synthetase_CS

PTHR43599
type: Resource
database: PANTHER
comment: MULTIFUNCTIONAL PROTEIN ADE2
signature sequence match: PANTHER PTHR43599 match 1

PTHR43599:SF3
type: Resource
database: PANTHER
comment: MULTIFUNCTIONAL PROTEIN ADE2
signature sequence match: PANTHER PTHR43599:SF3 match 1

PF01259
type: Resource
database: Pfam
comment: SAICAR_synt
signature sequence match: Pfam PF01259 match 1

SSF56104
type: Resource
database: SUPFAM
comment: SAICAR synthase-like
signature sequence match: SUPFAM SSF56104 match 1

TIGR00081
type: Resource
database: TIGRFAMs
comment: purC
signature sequence match: TIGRFAMs TIGR00081 match 1

PS01057
type: Resource
database: PROSITE
comment: SAICAR_SYNTHETASE_1
signature sequence match: PROSITE PS01057 match 1

PS01058
type: Resource
database: PROSITE
comment: SAICAR_SYNTHETASE_2
signature sequence match: PROSITE PS01058 match 1

SIPED1E33AC32864A85
type: Structured Name
full name: Phosphoribosylaminoimidazole-succinocarboxamide synthase
ec name: 6.3.2.6

SIP62D4B5FC234B1D94
type: Structured Name
full name: SAICAR synthetase

purC
type: Gene
locus name: COPRO5265_0191

SIPDB4311604804D14F
type: Similarity Annotation
comment: Belongs to the SAICAR synthetase family.

PRO_1000095977
type: Chain Annotation
comment: Phosphoribosylaminoimidazole-succinocarboxamide synthase
mass: 27054
range: 18636005757236270tt1tt236

18636005757236270tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y714-1

18636005757236270tt236
type: Position
type: ExactPosition
position: 236
reference: B5Y714-1

B5Y714-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 27054
value: MEKLDLLYEGKAKRVYKTDDPRYYIIEYKDEATAFDGKKKGIIQGKGTVNNKVSAVFFQLLEENGVPTHFVELLSPTEMLVKRVEIIPLEVIVRNYAAGSISRRLGLEEGIKFDQPIVEFCYKNDELGDPMVNNYHILAMKLANEEEINALTQQALRINQILSQFLLGKNIILVDFKLEFGRTDEGDIVLADEISPDTCRFWDSATMEKLDKDRFRRDMGGVEEAYMEIARRLGCV

http://purl.uniprot.org/uniprot/B5Y714#attribution-56893EA8E9B146E4DA8B727D1FB49657
manual: true
evidence: ECO_0000255
source: MF_00137

B5Y6A9
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-05-03
version: 63
mnemonic: PXPA_COPPD
old mnemonic: Y1531_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPC40A45A3BC8CC648
alternative name: SIPDD11BE61BC60541C
enzyme: http://purl.uniprot.org/enzyme/3.5.2.9
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP75E494BD6E2FFC6D
annotation: SIP7DB98C62E010D9F7
annotation: SIPBFFEB504E218F8CB
annotation: SIP1D6AE61BABED2CF8
annotation: PRO_1000132047
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/378
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0017168
classified with: GO_0005524
classified with: GO_0005975
sequence: B5Y6A9-1
proteome: Chromosome

B5Y6A9-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG1540
type: Resource
database: eggNOG
comment: Bacteria

cd10787
type: Resource
database: CDD
comment: LamB_YcsF_like
signature sequence match: CDD cd10787 match 1

http://purl.uniprot.org/gene3d/3.20.20.370
type: Resource
database: Gene3D
comment: Glycoside hydrolase/deacetylase
signature sequence match: Gene3D 3.20.20.370 match 1

MF_00691
type: Resource
database: HAMAP
comment: PxpA
signature sequence match: HAMAP MF 00691 match 1

IPR011330
type: Resource
database: InterPro
comment: Glyco_hydro/deAcase_b/a-brl

IPR005501
type: Resource
database: InterPro
comment: LamB/YcsF/PxpA-like

PTHR30292:SF0
type: Resource
database: PANTHER
comment: 5-OXOPROLINASE SUBUNIT A
signature sequence match: PANTHER PTHR30292:SF0 match 1

PTHR30292
type: Resource
database: PANTHER
comment: UNCHARACTERIZED PROTEIN YBGL-RELATED
signature sequence match: PANTHER PTHR30292 match 1

PF03746
type: Resource
database: Pfam
comment: LamB_YcsF
signature sequence match: Pfam PF03746 match 1

SSF88713
type: Resource
database: SUPFAM
comment: Glycoside hydrolase/deacetylase
signature sequence match: SUPFAM SSF88713 match 1

SIPC40A45A3BC8CC648
type: Structured Name
full name: 5-oxoprolinase subunit A
short name: 5-OPase subunit A
ec name: 3.5.2.9

SIPDD11BE61BC60541C
type: Structured Name
full name: 5-oxoprolinase (ATP-hydrolyzing) subunit A

pxpA
type: Gene
locus name: COPRO5265_1531

SIP75E494BD6E2FFC6D
type: Function Annotation
comment: Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.

SIPBFFEB504E218F8CB
type: Subunit Annotation
comment: Forms a complex composed of PxpA, PxpB and PxpC.

SIP1D6AE61BABED2CF8
type: Similarity Annotation
comment: Belongs to the LamB/PxpA family.

PRO_1000132047
type: Chain Annotation
comment: 5-oxoprolinase subunit A
mass: 28149
range: 18636005741508910tt1tt261

18636005741508910tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y6A9-1

18636005741508910tt261
type: Position
type: ExactPosition
position: 261
reference: B5Y6A9-1

B5Y6A9-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 28149
value: MPLKVDLNADMGESFGAYKLGLDRELLNLVTSANIACGFHAGDYMVMQKTVNMAASKNVAVGAHPGFPDLQGFGRRNMQLSPEEVRNLVIYQIGALQPFARAEGTELKHVKPHGALYNMAAVNYELAKAIAEAVKKTVPDAILLALANSEMVKAANDVGIRVTQEVFADRAYNEDGTLVPRSMPGAVIDDPLQATERALEMVLEGKVTAINGKEIPIVAHSICVHGDNPKAVELASSIRKQLEKAHVEVVELTYVLKAAYS

http://purl.uniprot.org/uniprot/B5Y6A9#attribution-7B116ACED0F0D15BB6D9BA8251B34EA3
manual: true
evidence: ECO_0000255
source: MF_00691

B5YA17
type: Protein
reviewed: true
created: 2009-03-24
modified: 2023-02-22
version: 77
mnemonic: PYRB_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP24F0874DB873DA3D
alternative name: SIP4E262F28113146D6
enzyme: http://purl.uniprot.org/enzyme/2.1.3.2
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP7D1DDB76D5CA8682
annotation: SIP760D0F8A5B55872D
annotation: SIP54434E5B071A3873
annotation: PRO_1000088753
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/665
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/808
classified with: GO_0016597
classified with: GO_0004070
classified with: GO_0006207
classified with: GO_0044205
classified with: GO_0006520
sequence: B5YA17-1
proteome: Chromosome

B5YA17-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0540
type: Resource
database: eggNOG
comment: Bacteria

http://purl.uniprot.org/gene3d/3.40.50.1370
type: Resource
database: Gene3D
comment: Aspartate/ornithine carbamoyltransferase
signature sequence match: Gene3D 3.40.50.1370 match 1
signature sequence match: Gene3D 3.40.50.1370 match 2

MF_00001
type: Resource
database: HAMAP
comment: Asp_carb_tr
signature sequence match: HAMAP MF 00001 match 1

IPR006132
type: Resource
database: InterPro
comment: Asp/Orn_carbamoyltranf_P-bd

IPR006130
type: Resource
database: InterPro
comment: Asp/Orn_carbamoylTrfase

IPR036901
type: Resource
database: InterPro
comment: Asp/Orn_carbamoylTrfase_sf

IPR002082
type: Resource
database: InterPro
comment: Asp_carbamoyltransf

IPR006131
type: Resource
database: InterPro
comment: Asp_carbamoyltransf_Asp/Orn-bd

PTHR45753:SF6
type: Resource
database: PANTHER
comment: ASPARTATE CARBAMOYLTRANSFERASE
signature sequence match: PANTHER PTHR45753:SF6 match 1

PTHR45753
type: Resource
database: PANTHER
comment: ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL
signature sequence match: PANTHER PTHR45753 match 1

PF00185
type: Resource
database: Pfam
comment: OTCace
signature sequence match: Pfam PF00185 match 1

PF02729
type: Resource
database: Pfam
comment: OTCace_N
signature sequence match: Pfam PF02729 match 1

PR00100
type: Resource
database: PRINTS
comment: AOTCASE

PR00101
type: Resource
database: PRINTS
comment: ATCASE

SSF53671
type: Resource
database: SUPFAM
comment: Aspartate/ornithine carbamoyltransferase
signature sequence match: SUPFAM SSF53671 match 1

TIGR00670
type: Resource
database: TIGRFAMs
comment: asp_carb_tr
signature sequence match: TIGRFAMs TIGR00670 match 1

PS00097
type: Resource
database: PROSITE
comment: CARBAMOYLTRANSFERASE
signature sequence match: PROSITE PS00097 match 1

SIP24F0874DB873DA3D
type: Structured Name
full name: Aspartate carbamoyltransferase
ec name: 2.1.3.2

SIP4E262F28113146D6
type: Structured Name
full name: Aspartate transcarbamylase
short name: ATCase

pyrB
type: Gene
locus name: COPRO5265_1313

SIP54434E5B071A3873
type: Similarity Annotation
comment: Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.

PRO_1000088753
type: Chain Annotation
comment: Aspartate carbamoyltransferase
mass: 33438
range: 18636005925009198tt1tt303

18636005925009198tt1
type: Position
type: ExactPosition
position: 1
reference: B5YA17-1

18636005925009198tt303
type: Position
type: ExactPosition
position: 303
reference: B5YA17-1

B5YA17-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 33438
value: MKHLLGLEKLSRDEILSILHLAAPMKDIILREVKKVPTLRGKIIGTLFYEPSTRTKNSFELAAKLLSADVVSVSVATSSVKKGESLKDTVLTLEAMGIEAIVIRHSRNGVPAYLSSCSKASIINAGDGQHEHPSQALLDLFTIQQYKGRIEGLKVLIVGDIMHSRVAKSNIYGLSKLGAEIIVSGPPTLIPEEVKNYAQVEYDLDNAIKKADVVNVLRLQLERQEAGLITSLEEYHRFYGLTKERMAKAKEDLLVLHPGPMNRGVEIDEEVAYCDKSAIQEQVSNGVAVRMAIYYTLMGGREE

http://purl.uniprot.org/uniprot/B5YA17#attribution-2412AEE9CD9104AAA7D197DA6AE3649C
manual: true
evidence: ECO_0000255
source: MF_00001

B5Y8A3
type: Protein
reviewed: true
created: 2009-07-28
modified: 2023-02-22
version: 83
mnemonic: PYRG_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPC5ADC39C1BAC0028
alternative name: SIP30B87ACAD624C010
alternative name: SIPBBF72A7315C38F26
alternative name: SIPAEDEB73C3BC60026
enzyme: http://purl.uniprot.org/enzyme/6.3.4.2
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPB947E9A01B6A7D38
annotation: SIP43BC29E53A6F805F
annotation: SIP899DC1A60DC7584D
annotation: SIPC4C70E6CF7A377A0
annotation: SIP1A33397E8619A119
annotation: SIP25158EFDA2ED7078
annotation: SIP9FA9AAA0BB6B76B6
annotation: SIPB35991A831BCC8C4
annotation: SIPBDF469A90C860DFE
annotation: PRO_1000164937
annotation: SIP9ADE580726CDFEC4
annotation: SIP4612B87ACEADAAB7
annotation: SIPB07B5235A33EC185
annotation: SIP917362D9D22F4B6D
annotation: SIPAE4F4D85C50943CF
annotation: SIPFA09CAA44ED68371
annotation: SIP379C80DE6537DEFB
annotation: SIP023A24564F20B05C
annotation: SIP4915061B33CD2FC2
annotation: SIPAE4514B6D5AE937D
annotation: SIP2DB75671EBC201B9
annotation: SIP2A4FDAEFEE48CC53
annotation: SIPFC493B3A13E879BB
annotation: SIPECE9247D58230A9F
annotation: SIPDC7AE1B957C4B628
annotation: SIP92C49877488A627A
annotation: SIPBB301FAC5270C19E
annotation: SIP398439A427820F73
annotation: SIPAC4F8D9949F087D9
annotation: SIPDA6F71B0D527B4C5
annotation: SIP1EC8D6ADE04006AE
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/315
classified with: http://purl.uniprot.org/keywords/436
classified with: http://purl.uniprot.org/keywords/460
classified with: http://purl.uniprot.org/keywords/479
classified with: http://purl.uniprot.org/keywords/665
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005524
classified with: GO_0003883
classified with: GO_0004359
classified with: GO_0046872
classified with: GO_0044210
classified with: GO_0006541
sequence: B5Y8A3-1
proteome: Chromosome

B5Y8A3-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0504
type: Resource
database: eggNOG
comment: Bacteria

cd03113
type: Resource
database: CDD
comment: CTPS_N
signature sequence match: CDD cd03113 match 1

cd01746
type: Resource
database: CDD
comment: GATase1_CTP_Synthase
signature sequence match: CDD cd01746 match 1

MF_01227
type: Resource
database: HAMAP
comment: PyrG
signature sequence match: HAMAP MF 01227 match 1

IPR029062
type: Resource
database: InterPro
comment: Class_I_gatase-like

IPR004468
type: Resource
database: InterPro
comment: CTP_synthase

IPR017456
type: Resource
database: InterPro
comment: CTP_synthase_N

IPR017926
type: Resource
database: InterPro
comment: GATASE

IPR033828
type: Resource
database: InterPro
comment: GATase1_CTP_Synthase

PTHR11550
type: Resource
database: PANTHER
comment: CTP SYNTHASE
signature sequence match: PANTHER PTHR11550 match 1

PTHR11550:SF0
type: Resource
database: PANTHER
comment: CTP SYNTHASE-RELATED
signature sequence match: PANTHER PTHR11550:SF0 match 1

PF06418
type: Resource
database: Pfam
comment: CTP_synth_N
signature sequence match: Pfam PF06418 match 1

PF00117
type: Resource
database: Pfam
comment: GATase
signature sequence match: Pfam PF00117 match 1

SSF52317
type: Resource
database: SUPFAM
comment: Class I glutamine amidotransferase-like
signature sequence match: SUPFAM SSF52317 match 1

TIGR00337
type: Resource
database: TIGRFAMs
comment: PyrG
signature sequence match: TIGRFAMs TIGR00337 match 1

PS51273
type: Resource
database: PROSITE
comment: GATASE_TYPE_1
signature sequence match: PROSITE PS51273 match 1

SIPC5ADC39C1BAC0028
type: Structured Name
full name: CTP synthase
ec name: 6.3.4.2

SIP30B87ACAD624C010
type: Structured Name
full name: Cytidine 5'-triphosphate synthase

SIPBBF72A7315C38F26
type: Structured Name
full name: Cytidine triphosphate synthetase
short name: CTP synthetase
short name: CTPS

SIPAEDEB73C3BC60026
type: Structured Name
full name: UTP--ammonia ligase

pyrG
type: Gene
locus name: COPRO5265_0650

SIPB947E9A01B6A7D38
type: Function Annotation
comment: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.

SIP1A33397E8619A119
type: Activity Regulation Annotation
comment: Allosterically activated by GTP, when glutamine is the substrate; GTP has no effect on the reaction when ammonia is the substrate. The allosteric effector GTP functions by stabilizing the protein conformation that binds the tetrahedral intermediate(s) formed during glutamine hydrolysis. Inhibited by the product CTP, via allosteric rather than competitive inhibition.

SIP9FA9AAA0BB6B76B6
type: Subunit Annotation
comment: Homotetramer.

SIPB35991A831BCC8C4
type: Annotation
comment: CTPSs have evolved a hybrid strategy for distinguishing between UTP and CTP. The overlapping regions of the product feedback inhibitory and substrate sites recognize a common feature in both compounds, the triphosphate moiety. To differentiate isosteric substrate and product pyrimidine rings, an additional pocket far from the expected kinase/ligase catalytic site, specifically recognizes the cytosine and ribose portions of the product inhibitor.

SIPBDF469A90C860DFE
type: Similarity Annotation
comment: Belongs to the CTP synthase family.

PRO_1000164937
type: Chain Annotation
comment: CTP synthase
mass: 59458
range: 18636005775061806tt1tt537

18636005775061806tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y8A3-1

18636005775061806tt537
type: Position
type: ExactPosition
position: 537
reference: B5Y8A3-1

SIP9ADE580726CDFEC4
type: Domain Extent Annotation
comment: Glutamine amidotransferase type-1
range: 18636005775061806tt297tt535

18636005775061806tt297
type: Position
type: ExactPosition
position: 297
reference: B5Y8A3-1

18636005775061806tt535
type: Position
type: ExactPosition
position: 535
reference: B5Y8A3-1

SIP4612B87ACEADAAB7
type: Region Annotation
comment: Amidoligase domain
range: 18636005775061806tt1tt267

18636005775061806tt267
type: Position
type: ExactPosition
position: 267
reference: B5Y8A3-1

SIPB07B5235A33EC185
type: Active Site Annotation
comment: Nucleophile; for glutamine hydrolysis
range: 18636005775061806tt382tt382

18636005775061806tt382
type: Position
type: ExactPosition
position: 382
reference: B5Y8A3-1

18636005775061806tt508
type: Position
type: ExactPosition
position: 508
reference: B5Y8A3-1

18636005775061806tt510
type: Position
type: ExactPosition
position: 510
reference: B5Y8A3-1

18636005775061806tt15
type: Position
type: ExactPosition
position: 15
reference: B5Y8A3-1

18636005775061806tt16
type: Position
type: ExactPosition
position: 16
reference: B5Y8A3-1

18636005775061806tt21
type: Position
type: ExactPosition
position: 21
reference: B5Y8A3-1

18636005775061806tt56
type: Position
type: ExactPosition
position: 56
reference: B5Y8A3-1

18636005775061806tt73
type: Position
type: ExactPosition
position: 73
reference: B5Y8A3-1

18636005775061806tt141
type: Position
type: ExactPosition
position: 141
reference: B5Y8A3-1

18636005775061806tt148
type: Position
type: ExactPosition
position: 148
reference: B5Y8A3-1

18636005775061806tt150
type: Position
type: ExactPosition
position: 150
reference: B5Y8A3-1

18636005775061806tt188
type: Position
type: ExactPosition
position: 188
reference: B5Y8A3-1

18636005775061806tt193
type: Position
type: ExactPosition
position: 193
reference: B5Y8A3-1

18636005775061806tt224
type: Position
type: ExactPosition
position: 224
reference: B5Y8A3-1

18636005775061806tt355
type: Position
type: ExactPosition
position: 355
reference: B5Y8A3-1

18636005775061806tt383
type: Position
type: ExactPosition
position: 383
reference: B5Y8A3-1

18636005775061806tt386
type: Position
type: ExactPosition
position: 386
reference: B5Y8A3-1

18636005775061806tt406
type: Position
type: ExactPosition
position: 406
reference: B5Y8A3-1

18636005775061806tt463
type: Position
type: ExactPosition
position: 463
reference: B5Y8A3-1

SIP314F64166B8BBE5A
subclass of: CHEBI_37563
comment: allosteric inhibitor

B5Y8A3-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 59458
value: MTNTKFVFVTGGVLSSVGKGIAAASMGMLFKARGYKVTAIKMDPYLNVDAGTMSPYQHGEVFVTEDGAETDLDLGHYERFLDENLSGKNNITSGKIYSQVITKERKGDYLGSTVQVIPHVTDAIKESILYGAQGADLAVVEIGGTVGDIESLPFLEAVRQLRRELGPNGSVVVHVTYVPILETTHEAKTKPTQHSVKELRSIGLQPDAIVLRSHTPLEKHVLEKTSLFCDVPLEGVINSYDVESVYDVPLLLEQEKLISVLEERLFGTTTEADLKKWKEMLSRQSERTLKVALVGKYVVLPDAYLSVIEAIRHAAMKLGVAAHVSLMSSDELEKCDDEQLSEKLSNMDALVVPGGFGARGIEGMVKVLRYARENKMPTLGLCLGMQVMSIEFARNVLGLKDANSTEFDPNTTYPVISLLPEQMQVRDLGGSMRLGAYPCTLVEGTRVHALYNKPVVFERHRHRFEFNNEFREAFENNGFQVSGLYEPKDLVEVLELKDHPFYVGVQYHPEFKSRPMVPHPLFLGLLSEAVAKASPVL

http://purl.uniprot.org/uniprot/B5Y8A3#attribution-30E4E1D26B43640F73A789260579B573
manual: true
evidence: ECO_0000255
source: MF_01227

B5Y926
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 75
mnemonic: RBFA_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP361F233A19F0E18E
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP6A0DDFD96B7F1837
annotation: SIP63CA62F537B6837D
annotation: SIP8CBB3B2DEAA41200
annotation: SIP832ADDF72F1EEA51
annotation: PRO_1000193244
annotation: SIP565AFB9451E3E4C3
annotation: SIP78FF9AAC65E99539
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/690
classified with: GO_0005737
classified with: GO_0030490
sequence: MKPLRKERLQQAIKQELSKILLEDMNDERLKFVTITDVELSDDQKYLKVYFSTMPGKNSEQILQSLERVKGYVSGEVARTLRLRFAPEIKFELDNSIERGVRMVKLLEDLEKKDEVKEDESHEDESTDHTEETNEEP
proteome: Chromosome

B5Y926-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0858
type: Resource
database: eggNOG
comment: Bacteria

MF_00003
type: Resource
database: HAMAP
comment: RbfA
signature sequence match: HAMAP MF 00003 match 1

IPR015946
type: Resource
database: InterPro
comment: KH_dom-like_a/b

IPR000238
type: Resource
database: InterPro
comment: RbfA

IPR023799
type: Resource
database: InterPro
comment: RbfA_dom_sf

IPR020053
type: Resource
database: InterPro
comment: Ribosome-bd_factorA_CS

PTHR33515
type: Resource
database: PANTHER
comment: RIBOSOME-BINDING FACTOR A, CHLOROPLASTIC-RELATED
signature sequence match: PANTHER PTHR33515 match 1

PTHR33515:SF1
type: Resource
database: PANTHER
comment: RIBOSOME-BINDING FACTOR A, CHLOROPLASTIC-RELATED
signature sequence match: PANTHER PTHR33515:SF1 match 1

PF02033
type: Resource
database: Pfam
comment: RBFA
signature sequence match: Pfam PF02033 match 1

SSF89919
type: Resource
database: SUPFAM
comment: Ribosome-binding factor A, RbfA
signature sequence match: SUPFAM SSF89919 match 1

TIGR00082
type: Resource
database: TIGRFAMs
comment: rbfA
signature sequence match: TIGRFAMs TIGR00082 match 1

PS01319
type: Resource
database: PROSITE
comment: RBFA
signature sequence match: PROSITE PS01319 match 1

SIP361F233A19F0E18E
type: Structured Name
full name: Ribosome-binding factor A

rbfA
type: Gene
locus name: COPRO5265_0944

SIP6A0DDFD96B7F1837
type: Function Annotation
comment: One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.

SIP63CA62F537B6837D
type: Subunit Annotation
comment: Monomer. Binds 30S ribosomal subunits, but not 50S ribosomal subunits or 70S ribosomes.

SIP832ADDF72F1EEA51
type: Similarity Annotation
comment: Belongs to the RbfA family.

PRO_1000193244
type: Chain Annotation
comment: Ribosome-binding factor A
mass: 16130
range: 18636005790856750tt1tt137

18636005790856750tt1
type: Position
type: ExactPosition
position: 1
reference: MKPLRKERLQQAIKQELSKILLEDMNDERLKFVTITDVELSDDQKYLKVYFSTMPGKNSEQILQSLERVKGYVSGEVARTLRLRFAPEIKFELDNSIERGVRMVKLLEDLEKKDEVKEDESHEDESTDHTEETNEEP

18636005790856750tt137
type: Position
type: ExactPosition
position: 137
reference: MKPLRKERLQQAIKQELSKILLEDMNDERLKFVTITDVELSDDQKYLKVYFSTMPGKNSEQILQSLERVKGYVSGEVARTLRLRFAPEIKFELDNSIERGVRMVKLLEDLEKKDEVKEDESHEDESTDHTEETNEEP

SIP565AFB9451E3E4C3
type: Region Annotation
comment: Disordered
range: 18636005790856750tt112tt137

18636005790856750tt112
type: Position
type: ExactPosition
position: 112
reference: MKPLRKERLQQAIKQELSKILLEDMNDERLKFVTITDVELSDDQKYLKVYFSTMPGKNSEQILQSLERVKGYVSGEVARTLRLRFAPEIKFELDNSIERGVRMVKLLEDLEKKDEVKEDESHEDESTDHTEETNEEP

SIP78FF9AAC65E99539
type: Compositional Bias Annotation
comment: Basic and acidic residues
range: 18636005790856750tt112tt128

18636005790856750tt128
type: Position
type: ExactPosition
position: 128
reference: MKPLRKERLQQAIKQELSKILLEDMNDERLKFVTITDVELSDDQKYLKVYFSTMPGKNSEQILQSLERVKGYVSGEVARTLRLRFAPEIKFELDNSIERGVRMVKLLEDLEKKDEVKEDESHEDESTDHTEETNEEP

MKPLRKERLQQAIKQELSKILLEDMNDERLKFVTITDVELSDDQKYLKVYFSTMPGKNSEQILQSLERVKGYVSGEVARTLRLRFAPEIKFELDNSIERGVRMVKLLEDLEKKDEVKEDESHEDESTDHTEETNEEP
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 16130

http://purl.uniprot.org/uniprot/B5Y926#attribution-F2EED02C3A9A3E2322FDA30A50F21196
manual: true
evidence: ECO_0000255
source: MF_00003

B5Y646
type: Protein
reviewed: true
created: 2009-07-28
modified: 2023-02-22
version: 67
mnemonic: RBSD_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP118EB4BCD835373B
enzyme: http://purl.uniprot.org/enzyme/5.4.99.62
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP1A4D82AB226E8C5F
annotation: SIP5EB254E52E962DCC
annotation: SIP18AD34851F051572
annotation: SIP9353AF5A47CC8EE5
annotation: SIP074BF0B186268ED6
annotation: SIP5DD2224B6BF19D7A
annotation: PRO_1000187139
annotation: SIP2150300A2536722A
annotation: SIP65C3AD3FB3B380EC
annotation: SIPED2F5D01BCBB9C6D
annotation: SIPFDD0DAB52E72CDD1
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/119
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/413
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0005737
classified with: GO_0062193
classified with: GO_0016872
classified with: GO_0048029
classified with: GO_0019303
sequence: MKKTILINSRLSEVIASMGHTDTIAIADSGLPIPKGVERIDLALTRDIPRFLDTLRVILSELCVEEAIIATEMKEKSPETYAELLKILGNIPIKEVSHEELKVMTKECVAVVRTGEYTPYCNIILRSGVVF
proteome: Chromosome

B5Y646-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG1869
type: Resource
database: eggNOG
comment: Bacteria

http://purl.uniprot.org/gene3d/3.40.1650.10
type: Resource
database: Gene3D
comment: RbsD-like domain
signature sequence match: Gene3D 3.40.1650.10 match 1

MF_01661
type: Resource
database: HAMAP
comment: D_rib_pyranase
signature sequence match: HAMAP MF 01661 match 1

IPR023064
type: Resource
database: InterPro
comment: D-ribose_pyranase

IPR023750
type: Resource
database: InterPro
comment: RbsD-like_sf

IPR007721
type: Resource
database: InterPro
comment: RbsD_FucU

PTHR37831
type: Resource
database: PANTHER
comment: D-RIBOSE PYRANASE
signature sequence match: PANTHER PTHR37831 match 1

PTHR37831:SF1
type: Resource
database: PANTHER
comment: D-RIBOSE PYRANASE
signature sequence match: PANTHER PTHR37831:SF1 match 1

PF05025
type: Resource
database: Pfam
comment: RbsD_FucU
signature sequence match: Pfam PF05025 match 1

SSF102546
type: Resource
database: SUPFAM
comment: RbsD-like
signature sequence match: SUPFAM SSF102546 match 1

SIP118EB4BCD835373B
type: Structured Name
full name: D-ribose pyranase
ec name: 5.4.99.62

rbsD
type: Gene
locus name: COPRO5265_1468

SIP1A4D82AB226E8C5F
type: Function Annotation
comment: Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.

SIP9353AF5A47CC8EE5
type: Subunit Annotation
comment: Homodecamer.

SIP5DD2224B6BF19D7A
type: Similarity Annotation
comment: Belongs to the RbsD / FucU family. RbsD subfamily.

PRO_1000187139
type: Chain Annotation
comment: D-ribose pyranase
mass: 14569
range: 18636005740656174tt1tt131

18636005740656174tt1
type: Position
type: ExactPosition
position: 1
reference: MKKTILINSRLSEVIASMGHTDTIAIADSGLPIPKGVERIDLALTRDIPRFLDTLRVILSELCVEEAIIATEMKEKSPETYAELLKILGNIPIKEVSHEELKVMTKECVAVVRTGEYTPYCNIILRSGVVF

18636005740656174tt131
type: Position
type: ExactPosition
position: 131
reference: MKKTILINSRLSEVIASMGHTDTIAIADSGLPIPKGVERIDLALTRDIPRFLDTLRVILSELCVEEAIIATEMKEKSPETYAELLKILGNIPIKEVSHEELKVMTKECVAVVRTGEYTPYCNIILRSGVVF

SIP2150300A2536722A
type: Active Site Annotation
comment: Proton donor
range: 18636005740656174tt20tt20

18636005740656174tt20
type: Position
type: ExactPosition
position: 20
reference: MKKTILINSRLSEVIASMGHTDTIAIADSGLPIPKGVERIDLALTRDIPRFLDTLRVILSELCVEEAIIATEMKEKSPETYAELLKILGNIPIKEVSHEELKVMTKECVAVVRTGEYTPYCNIILRSGVVF

18636005740656174tt28
type: Position
type: ExactPosition
position: 28
reference: MKKTILINSRLSEVIASMGHTDTIAIADSGLPIPKGVERIDLALTRDIPRFLDTLRVILSELCVEEAIIATEMKEKSPETYAELLKILGNIPIKEVSHEELKVMTKECVAVVRTGEYTPYCNIILRSGVVF

18636005740656174tt98
type: Position
type: ExactPosition
position: 98
reference: MKKTILINSRLSEVIASMGHTDTIAIADSGLPIPKGVERIDLALTRDIPRFLDTLRVILSELCVEEAIIATEMKEKSPETYAELLKILGNIPIKEVSHEELKVMTKECVAVVRTGEYTPYCNIILRSGVVF

18636005740656174tt120
type: Position
type: ExactPosition
position: 120
reference: MKKTILINSRLSEVIASMGHTDTIAIADSGLPIPKGVERIDLALTRDIPRFLDTLRVILSELCVEEAIIATEMKEKSPETYAELLKILGNIPIKEVSHEELKVMTKECVAVVRTGEYTPYCNIILRSGVVF

18636005740656174tt122
type: Position
type: ExactPosition
position: 122
reference: MKKTILINSRLSEVIASMGHTDTIAIADSGLPIPKGVERIDLALTRDIPRFLDTLRVILSELCVEEAIIATEMKEKSPETYAELLKILGNIPIKEVSHEELKVMTKECVAVVRTGEYTPYCNIILRSGVVF

substrate

MKKTILINSRLSEVIASMGHTDTIAIADSGLPIPKGVERIDLALTRDIPRFLDTLRVILSELCVEEAIIATEMKEKSPETYAELLKILGNIPIKEVSHEELKVMTKECVAVVRTGEYTPYCNIILRSGVVF
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 14569

http://purl.uniprot.org/uniprot/B5Y646#attribution-EDE8F9F069E951291701C3024E3C19E1
manual: true
evidence: ECO_0000255
source: MF_01661

B5Y930
type: Protein
reviewed: true
created: 2009-09-22
modified: 2023-02-22
version: 62
mnemonic: RIMP_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPCD792196D3FF1BE0
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP7C6013AA72E511BB
annotation: SIPB16EFC1583D5621A
annotation: SIPB6AA54EA9F4F2861
annotation: PRO_0000384633
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/690
classified with: GO_0005737
classified with: GO_0042274
sequence: MLSPKDRADLEERISKIVVSKGFYFIDLEERMEKGAHIISVVVHGEPSVTIGDCEKLTRAILPLLESFPWYGDNDHLEVTSPGLDRVLKREWEYEIFKGRVIDISFDRDGKSQTIRAKLVGRENENVVIEYEGNYFRIPFDQVRKAKLVFDEGGKEHGKKQKRSHRKGT
proteome: Chromosome

B5Y930-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0779
type: Resource
database: eggNOG
comment: Bacteria

cd01734
type: Resource
database: CDD
comment: YlxS_C
signature sequence match: CDD cd01734 match 1

http://purl.uniprot.org/gene3d/3.30.300.70
type: Resource
database: Gene3D
comment: RimP-like superfamily, N-terminal
signature sequence match: Gene3D 3.30.300.70 match 1

MF_01077
type: Resource
database: HAMAP
comment: RimP
signature sequence match: HAMAP MF 01077 match 1

IPR003728
type: Resource
database: InterPro
comment: Ribosome_maturation_RimP

IPR028998
type: Resource
database: InterPro
comment: RimP_C

IPR036847
type: Resource
database: InterPro
comment: RimP_C_sf

IPR028989
type: Resource
database: InterPro
comment: RimP_N

IPR035956
type: Resource
database: InterPro
comment: RimP_N_sf

PTHR33867
type: Resource
database: PANTHER
comment: RIBOSOME MATURATION FACTOR RIMP
signature sequence match: PANTHER PTHR33867 match 1

PTHR33867:SF1
type: Resource
database: PANTHER
comment: RIBOSOME MATURATION FACTOR RIMP
signature sequence match: PANTHER PTHR33867:SF1 match 1

PF17384
type: Resource
database: Pfam
comment: DUF150_C
signature sequence match: Pfam PF17384 match 1

PF02576
type: Resource
database: Pfam
comment: RimP_N
signature sequence match: Pfam PF02576 match 1

SSF74942
type: Resource
database: SUPFAM
comment: YhbC-like, C-terminal domain
signature sequence match: SUPFAM SSF74942 match 1

SSF75420
type: Resource
database: SUPFAM
comment: YhbC-like, N-terminal domain
signature sequence match: SUPFAM SSF75420 match 1

SIPCD792196D3FF1BE0
type: Structured Name
full name: Ribosome maturation factor RimP

rimP
type: Gene
locus name: COPRO5265_0948

SIP7C6013AA72E511BB
type: Function Annotation
comment: Required for maturation of 30S ribosomal subunits.

SIPB6AA54EA9F4F2861
type: Similarity Annotation
comment: Belongs to the RimP family.

PRO_0000384633
type: Chain Annotation
comment: Ribosome maturation factor RimP
mass: 19548
range: 18636005790920750tt1tt169

18636005790920750tt1
type: Position
type: ExactPosition
position: 1
reference: MLSPKDRADLEERISKIVVSKGFYFIDLEERMEKGAHIISVVVHGEPSVTIGDCEKLTRAILPLLESFPWYGDNDHLEVTSPGLDRVLKREWEYEIFKGRVIDISFDRDGKSQTIRAKLVGRENENVVIEYEGNYFRIPFDQVRKAKLVFDEGGKEHGKKQKRSHRKGT

18636005790920750tt169
type: Position
type: ExactPosition
position: 169
reference: MLSPKDRADLEERISKIVVSKGFYFIDLEERMEKGAHIISVVVHGEPSVTIGDCEKLTRAILPLLESFPWYGDNDHLEVTSPGLDRVLKREWEYEIFKGRVIDISFDRDGKSQTIRAKLVGRENENVVIEYEGNYFRIPFDQVRKAKLVFDEGGKEHGKKQKRSHRKGT

MLSPKDRADLEERISKIVVSKGFYFIDLEERMEKGAHIISVVVHGEPSVTIGDCEKLTRAILPLLESFPWYGDNDHLEVTSPGLDRVLKREWEYEIFKGRVIDISFDRDGKSQTIRAKLVGRENENVVIEYEGNYFRIPFDQVRKAKLVFDEGGKEHGKKQKRSHRKGT
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 19548

http://purl.uniprot.org/uniprot/B5Y930#attribution-A242CE4D7E847DED17F500F1FD8AA31B
manual: true
evidence: ECO_0000255
source: MF_01077

B5Y932
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 70
mnemonic: RL10_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPDB781F58527A8244
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPDEE3BFA334F70D44
annotation: SIPB1E05B8A5FE95A74
annotation: SIPACE93AB2A6D31197
annotation: PRO_1000120939
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/689
classified with: http://purl.uniprot.org/keywords/699
classified with: GO_1990904
classified with: GO_0005840
classified with: GO_0070180
classified with: GO_0006412
sequence: MTRVRPEKQAVVEQLREWIDQSKGMVFFSFEGLTSKDMQAMRADMKRNGLTVKVVKNTLLELAVKEVGLNVDESLFRGTTALLFSNEDELAPFKLFVEQVKKYGVLQAKGGILEGRWISAKEVDAIAKLPGRQELYAQLVGVVSSPMRGLVTVLSGPYRNLVYVLQAIKEKKEKAA
proteome: Chromosome

B5Y932-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0244
type: Resource
database: eggNOG
comment: Bacteria

cd05797
type: Resource
database: CDD
comment: Ribosomal_L10
signature sequence match: CDD cd05797 match 1

MF_00362
type: Resource
database: HAMAP
comment: Ribosomal_L10
signature sequence match: HAMAP MF 00362 match 1

IPR022973
type: Resource
database: InterPro
comment: Ribosomal_L10

IPR043141
type: Resource
database: InterPro
comment: Ribosomal_L10-like_sf

IPR001790
type: Resource
database: InterPro
comment: Ribosomal_L10P

PTHR11560
type: Resource
database: PANTHER
comment: 39S RIBOSOMAL PROTEIN L10, MITOCHONDRIAL
signature sequence match: PANTHER PTHR11560 match 1

PTHR11560:SF8
type: Resource
database: PANTHER
comment: 39S RIBOSOMAL PROTEIN L10, MITOCHONDRIAL
signature sequence match: PANTHER PTHR11560:SF8 match 1

PF00466
type: Resource
database: Pfam
comment: Ribosomal_L10
signature sequence match: Pfam PF00466 match 1

SSF160369
type: Resource
database: SUPFAM
comment: Ribosomal protein L10-like
signature sequence match: SUPFAM SSF160369 match 1

SIPDB781F58527A8244
type: Structured Name
full name: 50S ribosomal protein L10

rplJ
type: Gene
locus name: COPRO5265_0950

SIPDEE3BFA334F70D44
type: Function Annotation
comment: Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.

SIPB1E05B8A5FE95A74
type: Subunit Annotation
comment: Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.

SIPACE93AB2A6D31197
type: Similarity Annotation
comment: Belongs to the universal ribosomal protein uL10 family.

PRO_1000120939
type: Chain Annotation
comment: 50S ribosomal protein L10
mass: 19690
range: 18636005790921262tt1tt176

18636005790921262tt1
type: Position
type: ExactPosition
position: 1
reference: MTRVRPEKQAVVEQLREWIDQSKGMVFFSFEGLTSKDMQAMRADMKRNGLTVKVVKNTLLELAVKEVGLNVDESLFRGTTALLFSNEDELAPFKLFVEQVKKYGVLQAKGGILEGRWISAKEVDAIAKLPGRQELYAQLVGVVSSPMRGLVTVLSGPYRNLVYVLQAIKEKKEKAA

18636005790921262tt176
type: Position
type: ExactPosition
position: 176
reference: MTRVRPEKQAVVEQLREWIDQSKGMVFFSFEGLTSKDMQAMRADMKRNGLTVKVVKNTLLELAVKEVGLNVDESLFRGTTALLFSNEDELAPFKLFVEQVKKYGVLQAKGGILEGRWISAKEVDAIAKLPGRQELYAQLVGVVSSPMRGLVTVLSGPYRNLVYVLQAIKEKKEKAA

MTRVRPEKQAVVEQLREWIDQSKGMVFFSFEGLTSKDMQAMRADMKRNGLTVKVVKNTLLELAVKEVGLNVDESLFRGTTALLFSNEDELAPFKLFVEQVKKYGVLQAKGGILEGRWISAKEVDAIAKLPGRQELYAQLVGVVSSPMRGLVTVLSGPYRNLVYVLQAIKEKKEKAA
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 19690

http://purl.uniprot.org/uniprot/B5Y932#attribution-4F51B3F1D434022CF2FC011294FC5833
manual: true
evidence: ECO_0000255
source: MF_00362

B5Y934
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 67
mnemonic: RL11_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPA579268DFBFC294D
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP3288727363A19A2F
annotation: SIP6064B317077012B6
annotation: SIPF5701E19EF2E8FA4
annotation: SIP5F3D4260AEBBB501
annotation: PRO_1000195606
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/488
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/689
classified with: http://purl.uniprot.org/keywords/699
classified with: GO_1990904
classified with: GO_0005840
classified with: GO_0070180
classified with: GO_0003735
classified with: GO_0006412
sequence: MAKKIAAQFRLLLPAGKATPAPPVGPALGQRGVNIMEFIKRFNAATASMGDVLVPVDVTVFADKSFTFEVRTPPASFLLKKAAKVEKGSGEPNKVTVGKVTRAQVEEIAKQKMKDLNTEDLEAAVRIIEGTARSMGIQVVD
proteome: Chromosome

B5Y934-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0080
type: Resource
database: eggNOG
comment: Bacteria

cd00349
type: Resource
database: CDD
comment: Ribosomal_L11
signature sequence match: CDD cd00349 match 1

http://purl.uniprot.org/gene3d/1.10.10.250
type: Resource
database: Gene3D
comment: Ribosomal protein L11, C-terminal domain
signature sequence match: Gene3D 1.10.10.250 match 1

http://purl.uniprot.org/gene3d/3.30.1550.10
type: Resource
database: Gene3D
comment: Ribosomal protein L11/L12, N-terminal domain
signature sequence match: Gene3D 3.30.1550.10 match 1

MF_00736
type: Resource
database: HAMAP
comment: Ribosomal_L11
signature sequence match: HAMAP MF 00736 match 1

IPR000911
type: Resource
database: InterPro
comment: Ribosomal_L11/L12

IPR036796
type: Resource
database: InterPro
comment: Ribosomal_L11/L12_N_sf

IPR006519
type: Resource
database: InterPro
comment: Ribosomal_L11_bac-typ

IPR020783
type: Resource
database: InterPro
comment: Ribosomal_L11_C

IPR036769
type: Resource
database: InterPro
comment: Ribosomal_L11_C_sf

IPR020785
type: Resource
database: InterPro
comment: Ribosomal_L11_CS

IPR020784
type: Resource
database: InterPro
comment: Ribosomal_L11_N

PTHR11661:SF1
type: Resource
database: PANTHER
comment: 39S RIBOSOMAL PROTEIN L11, MITOCHONDRIAL
signature sequence match: PANTHER PTHR11661:SF1 match 1

PTHR11661
type: Resource
database: PANTHER
comment: 60S RIBOSOMAL PROTEIN L12
signature sequence match: PANTHER PTHR11661 match 1

PF00298
type: Resource
database: Pfam
comment: Ribosomal_L11
signature sequence match: Pfam PF00298 match 1

PF03946
type: Resource
database: Pfam
comment: Ribosomal_L11_N
signature sequence match: Pfam PF03946 match 1

SM00649
type: Resource
database: SMART
comment: RL11
signature sequence match: SMART SM00649 match 1

SSF54747
type: Resource
database: SUPFAM
comment: Ribosomal L11/L12e N-terminal domain
signature sequence match: SUPFAM SSF54747 match 1

SSF46906
type: Resource
database: SUPFAM
comment: Ribosomal protein L11, C-terminal domain
signature sequence match: SUPFAM SSF46906 match 1

TIGR01632
type: Resource
database: TIGRFAMs
comment: L11_bact
signature sequence match: TIGRFAMs TIGR01632 match 1

PS00359
type: Resource
database: PROSITE
comment: RIBOSOMAL_L11
signature sequence match: PROSITE PS00359 match 1

SIPA579268DFBFC294D
type: Structured Name
full name: 50S ribosomal protein L11

rplK
type: Gene
locus name: COPRO5265_0952

SIP3288727363A19A2F
type: Function Annotation
comment: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.

SIP6064B317077012B6
type: Subunit Annotation
comment: Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.

SIPF5701E19EF2E8FA4
type: PTM Annotation
comment: One or more lysine residues are methylated.

SIP5F3D4260AEBBB501
type: Similarity Annotation
comment: Belongs to the universal ribosomal protein uL11 family.

PRO_1000195606
type: Chain Annotation
comment: 50S ribosomal protein L11
mass: 15079
range: 18636005790921774tt1tt141

18636005790921774tt1
type: Position
type: ExactPosition
position: 1
reference: MAKKIAAQFRLLLPAGKATPAPPVGPALGQRGVNIMEFIKRFNAATASMGDVLVPVDVTVFADKSFTFEVRTPPASFLLKKAAKVEKGSGEPNKVTVGKVTRAQVEEIAKQKMKDLNTEDLEAAVRIIEGTARSMGIQVVD

18636005790921774tt141
type: Position
type: ExactPosition
position: 141
reference: MAKKIAAQFRLLLPAGKATPAPPVGPALGQRGVNIMEFIKRFNAATASMGDVLVPVDVTVFADKSFTFEVRTPPASFLLKKAAKVEKGSGEPNKVTVGKVTRAQVEEIAKQKMKDLNTEDLEAAVRIIEGTARSMGIQVVD

MAKKIAAQFRLLLPAGKATPAPPVGPALGQRGVNIMEFIKRFNAATASMGDVLVPVDVTVFADKSFTFEVRTPPASFLLKKAAKVEKGSGEPNKVTVGKVTRAQVEEIAKQKMKDLNTEDLEAAVRIIEGTARSMGIQVVD
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 15079

http://purl.uniprot.org/uniprot/B5Y934#attribution-B6454D9C74F28FA7DC5828513FC3A6DA
manual: true
evidence: ECO_0000255
source: MF_00736

B5Y7R3
type: Protein
reviewed: true
created: 2009-09-22
modified: 2023-02-22
version: 74
mnemonic: RL13_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPA62C23AA869CD541
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP015D86804BC13ACB
annotation: SIPBE7FFEC9B59F3EA6
annotation: SIPF07AC1E44753AD1F
annotation: PRO_1000214944
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/689
classified with: GO_1990904
classified with: GO_0005840
classified with: GO_0003735
classified with: GO_0006412
sequence: MKTIMAKPGQVERKWYVVDAAGKPLGRLSAGIARILMGKHKPIWTPGVDCGDFVIVINAEKVALSGSKELKKVYYDHSGYLGGQRVTPAWQLRQKKPEQLIYRSVKGMLPKNSLGRRQITHLKVYAGPEHPHQAQQPEKIELP
proteome: Chromosome

B5Y7R3-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0102
type: Resource
database: eggNOG
comment: Bacteria

cd00392
type: Resource
database: CDD
comment: Ribosomal_L13
signature sequence match: CDD cd00392 match 1

http://purl.uniprot.org/gene3d/3.90.1180.10
type: Resource
database: Gene3D
comment: Ribosomal protein L13
signature sequence match: Gene3D 3.90.1180.10 match 1

MF_01366
type: Resource
database: HAMAP
comment: Ribosomal_L13
signature sequence match: HAMAP MF 01366 match 1

IPR005822
type: Resource
database: InterPro
comment: Ribosomal_L13

IPR005823
type: Resource
database: InterPro
comment: Ribosomal_L13_bac-type

IPR023563
type: Resource
database: InterPro
comment: Ribosomal_L13_CS

IPR036899
type: Resource
database: InterPro
comment: Ribosomal_L13_sf

PTHR11545:SF2
type: Resource
database: PANTHER
comment: 39S RIBOSOMAL PROTEIN L13, MITOCHONDRIAL
signature sequence match: PANTHER PTHR11545:SF2 match 1

PTHR11545
type: Resource
database: PANTHER
comment: RIBOSOMAL PROTEIN L13
signature sequence match: PANTHER PTHR11545 match 1

PF00572
type: Resource
database: Pfam
comment: Ribosomal_L13
signature sequence match: Pfam PF00572 match 1

PIRSF002181
type: Resource
database: PIRSF
comment: Ribosomal_L13
signature sequence match: PIRSF PIRSF002181 match 1

SSF52161
type: Resource
database: SUPFAM
comment: Ribosomal protein L13
signature sequence match: SUPFAM SSF52161 match 1

TIGR01066
type: Resource
database: TIGRFAMs
comment: rplM_bact
signature sequence match: TIGRFAMs TIGR01066 match 1

PS00783
type: Resource
database: PROSITE
comment: RIBOSOMAL_L13
signature sequence match: PROSITE PS00783 match 1

SIPA62C23AA869CD541
type: Structured Name
full name: 50S ribosomal protein L13

rplM
type: Gene
locus name: COPRO5265_0445

SIP015D86804BC13ACB
type: Function Annotation
comment: This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.

SIPBE7FFEC9B59F3EA6
type: Subunit Annotation
comment: Part of the 50S ribosomal subunit.

SIPF07AC1E44753AD1F
type: Similarity Annotation
comment: Belongs to the universal ribosomal protein uL13 family.

PRO_1000214944
type: Chain Annotation
comment: 50S ribosomal protein L13
mass: 16034
range: 18636005759398702tt1tt143

18636005759398702tt1
type: Position
type: ExactPosition
position: 1
reference: MKTIMAKPGQVERKWYVVDAAGKPLGRLSAGIARILMGKHKPIWTPGVDCGDFVIVINAEKVALSGSKELKKVYYDHSGYLGGQRVTPAWQLRQKKPEQLIYRSVKGMLPKNSLGRRQITHLKVYAGPEHPHQAQQPEKIELP

18636005759398702tt143
type: Position
type: ExactPosition
position: 143
reference: MKTIMAKPGQVERKWYVVDAAGKPLGRLSAGIARILMGKHKPIWTPGVDCGDFVIVINAEKVALSGSKELKKVYYDHSGYLGGQRVTPAWQLRQKKPEQLIYRSVKGMLPKNSLGRRQITHLKVYAGPEHPHQAQQPEKIELP

MKTIMAKPGQVERKWYVVDAAGKPLGRLSAGIARILMGKHKPIWTPGVDCGDFVIVINAEKVALSGSKELKKVYYDHSGYLGGQRVTPAWQLRQKKPEQLIYRSVKGMLPKNSLGRRQITHLKVYAGPEHPHQAQQPEKIELP
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 16034

http://purl.uniprot.org/uniprot/B5Y7R3#attribution-2EF1722D2A1FABF9B34D160C66ED042D
manual: true
evidence: ECO_0000255
source: MF_01366

B5Y978
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 71
mnemonic: RL14_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPF8661DE41CEAA438
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP8D8F2516B2882FAF
annotation: SIPB790A226203C5019
annotation: SIP433B0B0056F255F9
annotation: PRO_1000144248
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/689
classified with: http://purl.uniprot.org/keywords/699
classified with: GO_0015934
classified with: GO_0019843
classified with: GO_0003735
classified with: GO_0006412
sequence: MIRPYTKLKVADNTGVKTIQVIRVLRGPRVAYGTIGDIVVANVREVLPNSDFKKGDVVKAVVVRLAKEIKRPDGTCVKFDDNAAVIIDQLGEPSGTRVFGPVARELREKGYLKIISLAPEVL
proteome: Chromosome

B5Y978-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0093
type: Resource
database: eggNOG
comment: Bacteria

http://purl.uniprot.org/gene3d/2.40.150.20
type: Resource
database: Gene3D
comment: Ribosomal protein L14
signature sequence match: Gene3D 2.40.150.20 match 1

MF_01367
type: Resource
database: HAMAP
comment: Ribosomal_L14
signature sequence match: HAMAP MF 01367 match 1

IPR036853
type: Resource
database: InterPro
comment: Ribosomal_L14_sf

IPR000218
type: Resource
database: InterPro
comment: Ribosomal_L14P

IPR005745
type: Resource
database: InterPro
comment: Ribosomal_L14P_bac-type

IPR019972
type: Resource
database: InterPro
comment: Ribosomal_L14P_CS

PTHR11761
type: Resource
database: PANTHER
comment: 50S/60S RIBOSOMAL PROTEIN L14/L23
signature sequence match: PANTHER PTHR11761 match 1

PTHR11761:SF3
type: Resource
database: PANTHER
comment: 54S RIBOSOMAL PROTEIN L38, MITOCHONDRIAL
signature sequence match: PANTHER PTHR11761:SF3 match 1

PF00238
type: Resource
database: Pfam
comment: Ribosomal_L14
signature sequence match: Pfam PF00238 match 1

SM01374
type: Resource
database: SMART
comment: Ribosomal_L14
signature sequence match: SMART SM01374 match 1

SSF50193
type: Resource
database: SUPFAM
comment: Ribosomal protein L14
signature sequence match: SUPFAM SSF50193 match 1

TIGR01067
type: Resource
database: TIGRFAMs
comment: rplN_bact
signature sequence match: TIGRFAMs TIGR01067 match 1

PS00049
type: Resource
database: PROSITE
comment: RIBOSOMAL_L14
signature sequence match: PROSITE PS00049 match 1

SIPF8661DE41CEAA438
type: Structured Name
full name: 50S ribosomal protein L14

rplN
type: Gene
locus name: COPRO5265_1003

SIP8D8F2516B2882FAF
type: Function Annotation
comment: Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.

SIPB790A226203C5019
type: Subunit Annotation
comment: Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.

SIP433B0B0056F255F9
type: Similarity Annotation
comment: Belongs to the universal ribosomal protein uL14 family.

PRO_1000144248
type: Chain Annotation
comment: 50S ribosomal protein L14
mass: 13355
range: 18636005791184942tt1tt122

18636005791184942tt1
type: Position
type: ExactPosition
position: 1
reference: MIRPYTKLKVADNTGVKTIQVIRVLRGPRVAYGTIGDIVVANVREVLPNSDFKKGDVVKAVVVRLAKEIKRPDGTCVKFDDNAAVIIDQLGEPSGTRVFGPVARELREKGYLKIISLAPEVL

18636005791184942tt122
type: Position
type: ExactPosition
position: 122
reference: MIRPYTKLKVADNTGVKTIQVIRVLRGPRVAYGTIGDIVVANVREVLPNSDFKKGDVVKAVVVRLAKEIKRPDGTCVKFDDNAAVIIDQLGEPSGTRVFGPVARELREKGYLKIISLAPEVL

MIRPYTKLKVADNTGVKTIQVIRVLRGPRVAYGTIGDIVVANVREVLPNSDFKKGDVVKAVVVRLAKEIKRPDGTCVKFDDNAAVIIDQLGEPSGTRVFGPVARELREKGYLKIISLAPEVL
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 13355

http://purl.uniprot.org/uniprot/B5Y978#attribution-71912748EB2D42C436765F2C8442B64F
manual: true
evidence: ECO_0000255
source: MF_01367

B5Y969
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-05-03
version: 67
mnemonic: RL15_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP46ABBAE3A5EAF66E
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP05AAE9367CCCFAA9
annotation: SIP20B3BB108915ABD1
annotation: SIP6722FDB5769A22C8
annotation: PRO_1000142798
annotation: SIPC63C8735C1A2B295
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/689
classified with: http://purl.uniprot.org/keywords/699
classified with: GO_0015934
classified with: GO_0019843
classified with: GO_0003735
classified with: GO_0006412
sequence: MRLHTLQPAPGAKSTRKRVGRGTSSGHGKTSGFGHKGQKARSGRVGKRGFEGGQTPLYKKLPKIMRFKNYPFKIEYEVVNVEKLNRFDSGTVVDIGTLVDTGLVSSLSAKVKILGQGEITKALQVKVHAISKSAKEKIEAAGGSVEVVD
proteome: Chromosome

B5Y969-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0200
type: Resource
database: eggNOG
comment: Bacteria

MF_01341
type: Resource
database: HAMAP
comment: Ribosomal_L15
signature sequence match: HAMAP MF 01341 match 1

IPR036227
type: Resource
database: InterPro
comment: L18e/L15P_sf

IPR030878
type: Resource
database: InterPro
comment: Ribosomal_L15

IPR005749
type: Resource
database: InterPro
comment: Ribosomal_L15_bac-type

IPR001196
type: Resource
database: InterPro
comment: Ribosomal_L15_CS

IPR021131
type: Resource
database: InterPro
comment: Ribosomal_L18e/L15P

PTHR12934:SF11
type: Resource
database: PANTHER
comment: 39S RIBOSOMAL PROTEIN L15, MITOCHONDRIAL
signature sequence match: PANTHER PTHR12934:SF11 match 1

PTHR12934
type: Resource
database: PANTHER
comment: 50S RIBOSOMAL PROTEIN L15
signature sequence match: PANTHER PTHR12934 match 1

PF00828
type: Resource
database: Pfam
comment: Ribosomal_L27A
signature sequence match: Pfam PF00828 match 1

SSF52080
type: Resource
database: SUPFAM
comment: Ribosomal proteins L15p and L18e
signature sequence match: SUPFAM SSF52080 match 1

TIGR01071
type: Resource
database: TIGRFAMs
comment: rplO_bact
signature sequence match: TIGRFAMs TIGR01071 match 1

PS00475
type: Resource
database: PROSITE
comment: RIBOSOMAL_L15
signature sequence match: PROSITE PS00475 match 1

SIP46ABBAE3A5EAF66E
type: Structured Name
full name: 50S ribosomal protein L15

rplO
type: Gene
locus name: COPRO5265_0994

SIP05AAE9367CCCFAA9
type: Function Annotation
comment: Binds to the 23S rRNA.

SIP20B3BB108915ABD1
type: Subunit Annotation
comment: Part of the 50S ribosomal subunit.

SIP6722FDB5769A22C8
type: Similarity Annotation
comment: Belongs to the universal ribosomal protein uL15 family.

PRO_1000142798
type: Chain Annotation
comment: 50S ribosomal protein L15
mass: 16004
range: 18636005791119662tt1tt149

18636005791119662tt1
type: Position
type: ExactPosition
position: 1
reference: MRLHTLQPAPGAKSTRKRVGRGTSSGHGKTSGFGHKGQKARSGRVGKRGFEGGQTPLYKKLPKIMRFKNYPFKIEYEVVNVEKLNRFDSGTVVDIGTLVDTGLVSSLSAKVKILGQGEITKALQVKVHAISKSAKEKIEAAGGSVEVVD

18636005791119662tt149
type: Position
type: ExactPosition
position: 149
reference: MRLHTLQPAPGAKSTRKRVGRGTSSGHGKTSGFGHKGQKARSGRVGKRGFEGGQTPLYKKLPKIMRFKNYPFKIEYEVVNVEKLNRFDSGTVVDIGTLVDTGLVSSLSAKVKILGQGEITKALQVKVHAISKSAKEKIEAAGGSVEVVD

SIPC63C8735C1A2B295
type: Region Annotation
comment: Disordered
range: 18636005791119662tt1tt53

18636005791119662tt53
type: Position
type: ExactPosition
position: 53
reference: MRLHTLQPAPGAKSTRKRVGRGTSSGHGKTSGFGHKGQKARSGRVGKRGFEGGQTPLYKKLPKIMRFKNYPFKIEYEVVNVEKLNRFDSGTVVDIGTLVDTGLVSSLSAKVKILGQGEITKALQVKVHAISKSAKEKIEAAGGSVEVVD

MRLHTLQPAPGAKSTRKRVGRGTSSGHGKTSGFGHKGQKARSGRVGKRGFEGGQTPLYKKLPKIMRFKNYPFKIEYEVVNVEKLNRFDSGTVVDIGTLVDTGLVSSLSAKVKILGQGEITKALQVKVHAISKSAKEKIEAAGGSVEVVD
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 16004

http://purl.uniprot.org/uniprot/B5Y969#attribution-B7C91BAB581D2FE26DA61E8139327041
manual: true
evidence: ECO_0000255
source: MF_01341

B5Y981
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 62
mnemonic: RL16_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP6C6304A718F43212
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP663E17EAB6F3DC93
annotation: SIPF5C18FF34B01F093
annotation: SIP21F06B0E2F826C40
annotation: PRO_1000142951
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/689
classified with: http://purl.uniprot.org/keywords/699
classified with: http://purl.uniprot.org/keywords/820
classified with: GO_1990904
classified with: GO_0005840
classified with: GO_0019843
classified with: GO_0003735
classified with: GO_0000049
classified with: GO_0006412
sequence: MLMPKRVKYRKNHLPHIKGKETRGLKLAFGDYGIQAVGRGYVDSRMIESCRVIMAKNIGKTGKYWIRIFPDVAWTKKPLEVRMGGGKGDPEKWIFPVKPGRIMFELTGVDEDTAKHIARLIGFRLPFEVRLISRV
proteome: Chromosome

B5Y981-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0197
type: Resource
database: eggNOG
comment: Bacteria

cd01433
type: Resource
database: CDD
comment: Ribosomal_L16_L10e
signature sequence match: CDD cd01433 match 1

http://purl.uniprot.org/gene3d/3.90.1170.10
type: Resource
database: Gene3D
comment: Ribosomal protein L10e/L16
signature sequence match: Gene3D 3.90.1170.10 match 1

MF_01342
type: Resource
database: HAMAP
comment: Ribosomal_L16
signature sequence match: HAMAP MF 01342 match 1

IPR016180
type: Resource
database: InterPro
comment: Ribosomal_L10e/L16

IPR036920
type: Resource
database: InterPro
comment: Ribosomal_L10e/L16_sf

IPR000114
type: Resource
database: InterPro
comment: Ribosomal_L16

IPR020798
type: Resource
database: InterPro
comment: Ribosomal_L16_CS

PTHR12220:SF13
type: Resource
database: PANTHER
comment: 39S RIBOSOMAL PROTEIN L16, MITOCHONDRIAL
signature sequence match: PANTHER PTHR12220:SF13 match 1

PTHR12220
type: Resource
database: PANTHER
comment: 50S/60S RIBOSOMAL PROTEIN L16
signature sequence match: PANTHER PTHR12220 match 1

PF00252
type: Resource
database: Pfam
comment: Ribosomal_L16
signature sequence match: Pfam PF00252 match 1

PR00060
type: Resource
database: PRINTS
comment: RIBOSOMALL16

SSF54686
type: Resource
database: SUPFAM
comment: Ribosomal protein L16p/L10e
signature sequence match: SUPFAM SSF54686 match 1

TIGR01164
type: Resource
database: TIGRFAMs
comment: rplP_bact
signature sequence match: TIGRFAMs TIGR01164 match 1

PS00701
type: Resource
database: PROSITE
comment: RIBOSOMAL_L16_2
signature sequence match: PROSITE PS00701 match 1

SIP6C6304A718F43212
type: Structured Name
full name: 50S ribosomal protein L16

rplP
type: Gene
locus name: COPRO5265_1006

SIP663E17EAB6F3DC93
type: Function Annotation
comment: Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.

SIPF5C18FF34B01F093
type: Subunit Annotation
comment: Part of the 50S ribosomal subunit.

SIP21F06B0E2F826C40
type: Similarity Annotation
comment: Belongs to the universal ribosomal protein uL16 family.

PRO_1000142951
type: Chain Annotation
comment: 50S ribosomal protein L16
mass: 15511
range: 18636005791248686tt1tt135

18636005791248686tt1
type: Position
type: ExactPosition
position: 1
reference: MLMPKRVKYRKNHLPHIKGKETRGLKLAFGDYGIQAVGRGYVDSRMIESCRVIMAKNIGKTGKYWIRIFPDVAWTKKPLEVRMGGGKGDPEKWIFPVKPGRIMFELTGVDEDTAKHIARLIGFRLPFEVRLISRV

18636005791248686tt135
type: Position
type: ExactPosition
position: 135
reference: MLMPKRVKYRKNHLPHIKGKETRGLKLAFGDYGIQAVGRGYVDSRMIESCRVIMAKNIGKTGKYWIRIFPDVAWTKKPLEVRMGGGKGDPEKWIFPVKPGRIMFELTGVDEDTAKHIARLIGFRLPFEVRLISRV

MLMPKRVKYRKNHLPHIKGKETRGLKLAFGDYGIQAVGRGYVDSRMIESCRVIMAKNIGKTGKYWIRIFPDVAWTKKPLEVRMGGGKGDPEKWIFPVKPGRIMFELTGVDEDTAKHIARLIGFRLPFEVRLISRV
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 15511

http://purl.uniprot.org/uniprot/B5Y981#attribution-EE64B39CB47F66B891040A67B4A27558
manual: true
evidence: ECO_0000255
source: MF_01342

B5Y959
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 65
mnemonic: RL17_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP9C553C519C391EBE
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP91ECC5F704D66B32
annotation: SIP022F3A769DB574C2
annotation: PRO_1000144404
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/689
classified with: GO_1990904
classified with: GO_0005840
classified with: GO_0003735
classified with: GO_0006412
sequence: MKHRVDGRKLGRKTEARIALLRTLSKQLVIHGEVETTLPKAKELKRFADKLVTHAKSKELHDIRLVEKHLGDRELVKKLTDEIAPRFAEVNGGYTTVLKTGFRKGDGAPTAIVRWSK
proteome: Chromosome

B5Y959-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0203
type: Resource
database: eggNOG
comment: Bacteria

http://purl.uniprot.org/gene3d/3.90.1030.10
type: Resource
database: Gene3D
comment: Ribosomal protein L17
signature sequence match: Gene3D 3.90.1030.10 match 1

MF_01368
type: Resource
database: HAMAP
comment: Ribosomal_L17
signature sequence match: HAMAP MF 01368 match 1

IPR000456
type: Resource
database: InterPro
comment: Ribosomal_L17

IPR036373
type: Resource
database: InterPro
comment: Ribosomal_L17_sf

PTHR14413:SF16
type: Resource
database: PANTHER
comment: 39S RIBOSOMAL PROTEIN L17, MITOCHONDRIAL
signature sequence match: PANTHER PTHR14413:SF16 match 1

PTHR14413
type: Resource
database: PANTHER
comment: RIBOSOMAL PROTEIN L17
signature sequence match: PANTHER PTHR14413 match 1

PF01196
type: Resource
database: Pfam
comment: Ribosomal_L17
signature sequence match: Pfam PF01196 match 1

SSF64263
type: Resource
database: SUPFAM
comment: Prokaryotic ribosomal protein L17
signature sequence match: SUPFAM SSF64263 match 1

TIGR00059
type: Resource
database: TIGRFAMs
comment: L17
signature sequence match: TIGRFAMs TIGR00059 match 1

SIP9C553C519C391EBE
type: Structured Name
full name: 50S ribosomal protein L17

rplQ
type: Gene
locus name: COPRO5265_0984

SIP91ECC5F704D66B32
type: Subunit Annotation
comment: Part of the 50S ribosomal subunit. Contacts protein L32.

SIP022F3A769DB574C2
type: Similarity Annotation
comment: Belongs to the bacterial ribosomal protein bL17 family.

PRO_1000144404
type: Chain Annotation
comment: 50S ribosomal protein L17
mass: 13249
range: 18636005791054126tt1tt117

18636005791054126tt1
type: Position
type: ExactPosition
position: 1
reference: MKHRVDGRKLGRKTEARIALLRTLSKQLVIHGEVETTLPKAKELKRFADKLVTHAKSKELHDIRLVEKHLGDRELVKKLTDEIAPRFAEVNGGYTTVLKTGFRKGDGAPTAIVRWSK

18636005791054126tt117
type: Position
type: ExactPosition
position: 117
reference: MKHRVDGRKLGRKTEARIALLRTLSKQLVIHGEVETTLPKAKELKRFADKLVTHAKSKELHDIRLVEKHLGDRELVKKLTDEIAPRFAEVNGGYTTVLKTGFRKGDGAPTAIVRWSK

MKHRVDGRKLGRKTEARIALLRTLSKQLVIHGEVETTLPKAKELKRFADKLVTHAKSKELHDIRLVEKHLGDRELVKKLTDEIAPRFAEVNGGYTTVLKTGFRKGDGAPTAIVRWSK
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 13249

http://purl.uniprot.org/uniprot/B5Y959#attribution-1652EB431B6D51675583D9EE45059C46
manual: true
evidence: ECO_0000255
source: MF_01368

B5Y8F5
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 71
mnemonic: RL19_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP73C146119A340687
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP889821323ACFF14D
annotation: SIP46B91CAEEF566A23
annotation: PRO_1000193814
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/689
classified with: GO_1990904
classified with: GO_0005840
classified with: GO_0003735
classified with: GO_0006412
sequence: MDIIRRIEQTMMREDVPPVEVGDTVRVKWRFTERDRSGEDKSRVQAYEGIVIAKKGTGISESIVVRKISSGVGVEKTFPLHSPNLVDLEVVTRGKVRRAKLYYLREKKHLVVKKKSRF
proteome: Chromosome

B5Y8F5-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0335
type: Resource
database: eggNOG
comment: Bacteria

MF_00402
type: Resource
database: HAMAP
comment: Ribosomal_L19
signature sequence match: HAMAP MF 00402 match 1

IPR038657
type: Resource
database: InterPro
comment: L19_sf

IPR001857
type: Resource
database: InterPro
comment: Ribosomal_L19

IPR018257
type: Resource
database: InterPro
comment: Ribosomal_L19_CS

PTHR15680:SF9
type: Resource
database: PANTHER
comment: 39S RIBOSOMAL PROTEIN L19, MITOCHONDRIAL
signature sequence match: PANTHER PTHR15680:SF9 match 1

PTHR15680
type: Resource
database: PANTHER
comment: RIBOSOMAL PROTEIN L19
signature sequence match: PANTHER PTHR15680 match 1

PF01245
type: Resource
database: Pfam
comment: Ribosomal_L19
signature sequence match: Pfam PF01245 match 1

PIRSF002191
type: Resource
database: PIRSF
comment: Ribosomal_L19
signature sequence match: PIRSF PIRSF002191 match 1

PR00061
type: Resource
database: PRINTS
comment: RIBOSOMALL19

TIGR01024
type: Resource
database: TIGRFAMs
comment: rplS_bact
signature sequence match: TIGRFAMs TIGR01024 match 1

PS01015
type: Resource
database: PROSITE
comment: RIBOSOMAL_L19
signature sequence match: PROSITE PS01015 match 1

SIP73C146119A340687
type: Structured Name
full name: 50S ribosomal protein L19

rplS
type: Gene
locus name: COPRO5265_0704

SIP889821323ACFF14D
type: Function Annotation
comment: This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.

SIP46B91CAEEF566A23
type: Similarity Annotation
comment: Belongs to the bacterial ribosomal protein bL19 family.

PRO_1000193814
type: Chain Annotation
comment: 50S ribosomal protein L19
mass: 13639
range: 18636005775389998tt1tt118

18636005775389998tt1
type: Position
type: ExactPosition
position: 1
reference: MDIIRRIEQTMMREDVPPVEVGDTVRVKWRFTERDRSGEDKSRVQAYEGIVIAKKGTGISESIVVRKISSGVGVEKTFPLHSPNLVDLEVVTRGKVRRAKLYYLREKKHLVVKKKSRF

18636005775389998tt118
type: Position
type: ExactPosition
position: 118
reference: MDIIRRIEQTMMREDVPPVEVGDTVRVKWRFTERDRSGEDKSRVQAYEGIVIAKKGTGISESIVVRKISSGVGVEKTFPLHSPNLVDLEVVTRGKVRRAKLYYLREKKHLVVKKKSRF

MDIIRRIEQTMMREDVPPVEVGDTVRVKWRFTERDRSGEDKSRVQAYEGIVIAKKGTGISESIVVRKISSGVGVEKTFPLHSPNLVDLEVVTRGKVRRAKLYYLREKKHLVVKKKSRF
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 13639

http://purl.uniprot.org/uniprot/B5Y8F5#attribution-9C6EA03186610A5B683578101200D8DA
manual: true
evidence: ECO_0000255
source: MF_00402

B5Y807
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 67
mnemonic: RL21_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPB8AC73FBCB9DD92F
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP9A02720ACA1B8C9B
annotation: SIPC8EB3D4313B95E21
annotation: SIP030940F36B0F3C3D
annotation: PRO_1000143777
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/689
classified with: http://purl.uniprot.org/keywords/699
classified with: GO_0005737
classified with: GO_1990904
classified with: GO_0005840
classified with: GO_0019843
classified with: GO_0003735
classified with: GO_0006412
sequence: MYALLEIRGKQYKVKENSTILVPGWEEIKPEEVKVLMVKDEANTVVGTPFVEGAEIELEPVKQIRTKKIKVRRFKAKVNYHRKKSHRIRYTILRINGIKTSVLTEG
proteome: Chromosome

B5Y807-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0261
type: Resource
database: eggNOG
comment: Bacteria

MF_01363
type: Resource
database: HAMAP
comment: Ribosomal_L21
signature sequence match: HAMAP MF 01363 match 1

IPR036164
type: Resource
database: InterPro
comment: L21-like_sf

IPR028909
type: Resource
database: InterPro
comment: L21p-like

IPR001787
type: Resource
database: InterPro
comment: Ribosomal_L21

PTHR21349:SF0
type: Resource
database: PANTHER
comment: 39S RIBOSOMAL PROTEIN L21, MITOCHONDRIAL
signature sequence match: PANTHER PTHR21349:SF0 match 1

PTHR21349
type: Resource
database: PANTHER
comment: 50S RIBOSOMAL PROTEIN L21
signature sequence match: PANTHER PTHR21349 match 1

PF00829
type: Resource
database: Pfam
comment: Ribosomal_L21p
signature sequence match: Pfam PF00829 match 1

SSF141091
type: Resource
database: SUPFAM
comment: L21p-like
signature sequence match: SUPFAM SSF141091 match 1

TIGR00061
type: Resource
database: TIGRFAMs
comment: L21
signature sequence match: TIGRFAMs TIGR00061 match 1

SIPB8AC73FBCB9DD92F
type: Structured Name
full name: 50S ribosomal protein L21

rplU
type: Gene
locus name: COPRO5265_0548

SIP9A02720ACA1B8C9B
type: Function Annotation
comment: This protein binds to 23S rRNA in the presence of protein L20.

SIPC8EB3D4313B95E21
type: Subunit Annotation
comment: Part of the 50S ribosomal subunit. Contacts protein L20.

SIP030940F36B0F3C3D
type: Similarity Annotation
comment: Belongs to the bacterial ribosomal protein bL21 family.

PRO_1000143777
type: Chain Annotation
comment: 50S ribosomal protein L21
mass: 12335
range: 18636005773948718tt1tt106

18636005773948718tt1
type: Position
type: ExactPosition
position: 1
reference: MYALLEIRGKQYKVKENSTILVPGWEEIKPEEVKVLMVKDEANTVVGTPFVEGAEIELEPVKQIRTKKIKVRRFKAKVNYHRKKSHRIRYTILRINGIKTSVLTEG

18636005773948718tt106
type: Position
type: ExactPosition
position: 106
reference: MYALLEIRGKQYKVKENSTILVPGWEEIKPEEVKVLMVKDEANTVVGTPFVEGAEIELEPVKQIRTKKIKVRRFKAKVNYHRKKSHRIRYTILRINGIKTSVLTEG

MYALLEIRGKQYKVKENSTILVPGWEEIKPEEVKVLMVKDEANTVVGTPFVEGAEIELEPVKQIRTKKIKVRRFKAKVNYHRKKSHRIRYTILRINGIKTSVLTEG
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 12335

http://purl.uniprot.org/uniprot/B5Y807#attribution-F5429C503554F8427CDFBC6D669D02B4
manual: true
evidence: ECO_0000255
source: MF_01363

B5Y806
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 68
mnemonic: RL27_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPD634EB4EE680C5C1
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP987FB2ABD99CC8AE
annotation: PRO_1000128725
annotation: SIPD5E9C30646455AA1
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/689
classified with: GO_1990904
classified with: GO_0005840
classified with: GO_0003735
classified with: GO_0006412
sequence: MAHHKGGGSSRNGKDSNPQYLGVKAYGGEKVKPGSIIVRQRGNHFWPGKNVGQGKDFTLFALAEGVVQFEKKGGKKFVSVIPNEQK
proteome: Chromosome

B5Y806-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0211
type: Resource
database: eggNOG
comment: Bacteria

MF_00539
type: Resource
database: HAMAP
comment: Ribosomal_L27
signature sequence match: HAMAP MF 00539 match 1

IPR001684
type: Resource
database: InterPro
comment: Ribosomal_L27

IPR018261
type: Resource
database: InterPro
comment: Ribosomal_L27_CS

PTHR15893:SF0
type: Resource
database: PANTHER
comment: 39S RIBOSOMAL PROTEIN L27, MITOCHONDRIAL
signature sequence match: PANTHER PTHR15893:SF0 match 1

PTHR15893
type: Resource
database: PANTHER
comment: RIBOSOMAL PROTEIN L27
signature sequence match: PANTHER PTHR15893 match 1

PF01016
type: Resource
database: Pfam
comment: Ribosomal_L27
signature sequence match: Pfam PF01016 match 1

PR00063
type: Resource
database: PRINTS
comment: RIBOSOMALL27

SSF110324
type: Resource
database: SUPFAM
comment: Ribosomal L27 protein-like
signature sequence match: SUPFAM SSF110324 match 1

TIGR00062
type: Resource
database: TIGRFAMs
comment: L27
signature sequence match: TIGRFAMs TIGR00062 match 1

PS00831
type: Resource
database: PROSITE
comment: RIBOSOMAL_L27
signature sequence match: PROSITE PS00831 match 1

SIPD634EB4EE680C5C1
type: Structured Name
full name: 50S ribosomal protein L27

rpmA
type: Gene
locus name: COPRO5265_0547

SIP987FB2ABD99CC8AE
type: Similarity Annotation
comment: Belongs to the bacterial ribosomal protein bL27 family.

PRO_1000128725
type: Chain Annotation
comment: 50S ribosomal protein L27
mass: 9311
range: 18636005773948462tt1tt86

18636005773948462tt1
type: Position
type: ExactPosition
position: 1
reference: MAHHKGGGSSRNGKDSNPQYLGVKAYGGEKVKPGSIIVRQRGNHFWPGKNVGQGKDFTLFALAEGVVQFEKKGGKKFVSVIPNEQK

18636005773948462tt86
type: Position
type: ExactPosition
position: 86
reference: MAHHKGGGSSRNGKDSNPQYLGVKAYGGEKVKPGSIIVRQRGNHFWPGKNVGQGKDFTLFALAEGVVQFEKKGGKKFVSVIPNEQK

SIPD5E9C30646455AA1
type: Region Annotation
comment: Disordered
range: 18636005773948462tt1tt21

18636005773948462tt21
type: Position
type: ExactPosition
position: 21
reference: MAHHKGGGSSRNGKDSNPQYLGVKAYGGEKVKPGSIIVRQRGNHFWPGKNVGQGKDFTLFALAEGVVQFEKKGGKKFVSVIPNEQK

MAHHKGGGSSRNGKDSNPQYLGVKAYGGEKVKPGSIIVRQRGNHFWPGKNVGQGKDFTLFALAEGVVQFEKKGGKKFVSVIPNEQK
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 9311

http://purl.uniprot.org/uniprot/B5Y806#attribution-0C2DF4279EF5852A7132646F9EA289F3
manual: true
evidence: ECO_0000255
source: MF_00539

B5Y795
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 61
mnemonic: RL28_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPB542057B9F339864
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP0C223823CA1006A1
annotation: PRO_1000121611
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/689
classified with: GO_1990904
classified with: GO_0005840
classified with: GO_0003735
classified with: GO_0006412
sequence: MARVCSVCGKGTTFGHNVSHSNRRTNRRWVANLKRVHGRFPDGKVRTAYVCVKCLKAGKVEIL
proteome: Chromosome

B5Y795-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

http://purl.uniprot.org/gene3d/2.30.170.40
type: Resource
database: Gene3D
comment: Ribosomal protein L28/L24
signature sequence match: Gene3D 2.30.170.40 match 1

MF_00373
type: Resource
database: HAMAP
comment: Ribosomal_L28
signature sequence match: HAMAP MF 00373 match 1

IPR034704
type: Resource
database: InterPro
comment: L28p-like

IPR026569
type: Resource
database: InterPro
comment: Ribo_L28/L24

IPR037147
type: Resource
database: InterPro
comment: Ribo_L28/L24_sf

IPR001383
type: Resource
database: InterPro
comment: Ribosomal_L28

PTHR39080
type: Resource
database: PANTHER
comment: 50S RIBOSOMAL PROTEIN L28
signature sequence match: PANTHER PTHR39080 match 1

PTHR39080:SF1
type: Resource
database: PANTHER
comment: 50S RIBOSOMAL PROTEIN L28-1
signature sequence match: PANTHER PTHR39080:SF1 match 1

PF00830
type: Resource
database: Pfam
comment: Ribosomal_L28
signature sequence match: Pfam PF00830 match 1

SSF143800
type: Resource
database: SUPFAM
comment: L28p-like
signature sequence match: SUPFAM SSF143800 match 1

TIGR00009
type: Resource
database: TIGRFAMs
comment: L28
signature sequence match: TIGRFAMs TIGR00009 match 1

SIPB542057B9F339864
type: Structured Name
full name: 50S ribosomal protein L28

rpmB
type: Gene
locus name: COPRO5265_0274

SIP0C223823CA1006A1
type: Similarity Annotation
comment: Belongs to the bacterial ribosomal protein bL28 family.

PRO_1000121611
type: Chain Annotation
comment: 50S ribosomal protein L28
mass: 7070
range: 18636005757760814tt1tt63

18636005757760814tt1
type: Position
type: ExactPosition
position: 1
reference: MARVCSVCGKGTTFGHNVSHSNRRTNRRWVANLKRVHGRFPDGKVRTAYVCVKCLKAGKVEIL

18636005757760814tt63
type: Position
type: ExactPosition
position: 63
reference: MARVCSVCGKGTTFGHNVSHSNRRTNRRWVANLKRVHGRFPDGKVRTAYVCVKCLKAGKVEIL

MARVCSVCGKGTTFGHNVSHSNRRTNRRWVANLKRVHGRFPDGKVRTAYVCVKCLKAGKVEIL
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 7070

http://purl.uniprot.org/uniprot/B5Y795#attribution-0FFBD69F48B7729C321767B2FAF32169
manual: true
evidence: ECO_0000255
source: MF_00373

B5Y980
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 69
mnemonic: RL29_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIPBD2059D257FA87FA
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPEBC342C5A6C44C29
annotation: PRO_1000121752
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/689
classified with: GO_1990904
classified with: GO_0005840
classified with: GO_0003735
classified with: GO_0006412
sequence: MQGTELREKTTEELEALLKELRAKLVNLKFQLSVGKLTDHTAITKTKRDIARVLTVLRERGIKL
proteome: Chromosome

B5Y980-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0255
type: Resource
database: eggNOG
comment: Bacteria

cd00427
type: Resource
database: CDD
comment: Ribosomal_L29_HIP
signature sequence match: CDD cd00427 match 1

MF_00374
type: Resource
database: HAMAP
comment: Ribosomal_L29
signature sequence match: HAMAP MF 00374 match 1

IPR001854
type: Resource
database: InterPro
comment: Ribosomal_L29/L35

IPR036049
type: Resource
database: InterPro
comment: Ribosomal_L29/L35_sf

PTHR10916:SF0
type: Resource
database: PANTHER
comment: 50S RIBOSOMAL PROTEIN L29, CHLOROPLASTIC
signature sequence match: PANTHER PTHR10916:SF0 match 1

PTHR10916
type: Resource
database: PANTHER
comment: 60S RIBOSOMAL PROTEIN L35/50S RIBOSOMAL PROTEIN L29
signature sequence match: PANTHER PTHR10916 match 1

PF00831
type: Resource
database: Pfam
comment: Ribosomal_L29
signature sequence match: Pfam PF00831 match 1

SSF46561
type: Resource
database: SUPFAM
comment: Ribosomal protein L29 (L29p)
signature sequence match: SUPFAM SSF46561 match 1

TIGR00012
type: Resource
database: TIGRFAMs
comment: L29
signature sequence match: TIGRFAMs TIGR00012 match 1

SIPBD2059D257FA87FA
type: Structured Name
full name: 50S ribosomal protein L29

rpmC
type: Gene
locus name: COPRO5265_1005

SIPEBC342C5A6C44C29
type: Similarity Annotation
comment: Belongs to the universal ribosomal protein uL29 family.

PRO_1000121752
type: Chain Annotation
comment: 50S ribosomal protein L29
mass: 7346
range: 18636005791248430tt1tt64

18636005791248430tt1
type: Position
type: ExactPosition
position: 1
reference: MQGTELREKTTEELEALLKELRAKLVNLKFQLSVGKLTDHTAITKTKRDIARVLTVLRERGIKL

18636005791248430tt64
type: Position
type: ExactPosition
position: 64
reference: MQGTELREKTTEELEALLKELRAKLVNLKFQLSVGKLTDHTAITKTKRDIARVLTVLRERGIKL

MQGTELREKTTEELEALLKELRAKLVNLKFQLSVGKLTDHTAITKTKRDIARVLTVLRERGIKL
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 7346

http://purl.uniprot.org/uniprot/B5Y980#attribution-B6A0C8DF4ABA16111D321CEB4C83C8EF
manual: true
evidence: ECO_0000255
source: MF_00374

B5Y985
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 68
mnemonic: RL2_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP60BF86D54C08C14A
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP2CA4E87A4A4E4FF3
annotation: SIP373F70FF56867AEC
annotation: SIP3F4B8095E5A0377E
annotation: PRO_1000141531
annotation: SIPF9D2DB2095DB7CA7
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/689
classified with: http://purl.uniprot.org/keywords/699
classified with: GO_0015934
classified with: GO_0019843
classified with: GO_0003735
classified with: GO_0016740
classified with: GO_0006412
sequence: B5Y985-1
proteome: Chromosome

B5Y985-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0090
type: Resource
database: eggNOG
comment: Bacteria

http://purl.uniprot.org/gene3d/4.10.950.10
type: Resource
database: Gene3D
comment: Ribosomal protein L2, domain 3
signature sequence match: Gene3D 4.10.950.10 match 1

MF 01320 B
type: Resource
database: HAMAP
comment: Ribosomal_L2_B
signature sequence match: HAMAP MF 01320 B match 1

IPR022666
type: Resource
database: InterPro
comment: Rbsml_prot_L2_RNA-bd_dom

IPR002171
type: Resource
database: InterPro
comment: Ribosomal_L2

IPR005880
type: Resource
database: InterPro
comment: Ribosomal_L2_bac/org-type

IPR022669
type: Resource
database: InterPro
comment: Ribosomal_L2_C

IPR022671
type: Resource
database: InterPro
comment: Ribosomal_L2_CS

IPR014726
type: Resource
database: InterPro
comment: Ribosomal_L2_dom3

PTHR13691:SF5
type: Resource
database: PANTHER
comment: 39S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL
signature sequence match: PANTHER PTHR13691:SF5 match 1

PTHR13691
type: Resource
database: PANTHER
comment: RIBOSOMAL PROTEIN L2
signature sequence match: PANTHER PTHR13691 match 1

PF00181
type: Resource
database: Pfam
comment: Ribosomal_L2
signature sequence match: Pfam PF00181 match 1

PF03947
type: Resource
database: Pfam
comment: Ribosomal_L2_C
signature sequence match: Pfam PF03947 match 1

PIRSF002158
type: Resource
database: PIRSF
comment: Ribosomal_L2
signature sequence match: PIRSF PIRSF002158 match 1

SM01383
type: Resource
database: SMART
comment: Ribosomal_L2
signature sequence match: SMART SM01383 match 1

SM01382
type: Resource
database: SMART
comment: Ribosomal_L2_C
signature sequence match: SMART SM01382 match 1

TIGR01171
type: Resource
database: TIGRFAMs
comment: rplB_bact
signature sequence match: TIGRFAMs TIGR01171 match 1

PS00467
type: Resource
database: PROSITE
comment: RIBOSOMAL_L2
signature sequence match: PROSITE PS00467 match 1

SIP60BF86D54C08C14A
type: Structured Name
full name: 50S ribosomal protein L2

rplB
type: Gene
locus name: COPRO5265_1010

SIP2CA4E87A4A4E4FF3
type: Function Annotation
comment: One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.

SIP373F70FF56867AEC
type: Subunit Annotation
comment: Part of the 50S ribosomal subunit. Forms a bridge to the 30S subunit in the 70S ribosome.

SIP3F4B8095E5A0377E
type: Similarity Annotation
comment: Belongs to the universal ribosomal protein uL2 family.

PRO_1000141531
type: Chain Annotation
comment: 50S ribosomal protein L2
mass: 30617
range: 18636005791249710tt1tt276

18636005791249710tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y985-1

18636005791249710tt276
type: Position
type: ExactPosition
position: 276
reference: B5Y985-1

SIPF9D2DB2095DB7CA7
type: Region Annotation
comment: Disordered
range: 18636005791249710tt203tt276

18636005791249710tt203
type: Position
type: ExactPosition
position: 203
reference: B5Y985-1

B5Y985-1
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 30617
value: MPVRRYKPVTSSTRHRVVIDYKSVITKTEPEKSLLAPLKKSGGRNNAGRISVRFRGGGHKRRYRIIDFKRDKDGIPGKITSIEYDPNRTAFIALVTYADGEKRYILAPDEIEVGDVIISGEEAPIRVGNALPLSKIPTGTTIHNIELYPGRGGQLVRSAGTWAQLMAKEGDYAHVRLPSGEIRLINVKCKATIGRVSNLDHENVSSGKAGRTRWLGRRPQVRGTAMNPVDHPHGGGEGKSPIGHPSPLSPWGWKTLGWKTRRGKKPSDKFIVKRRK

http://purl.uniprot.org/uniprot/B5Y985#attribution-7377742883DC9316360504369FB4CA26
manual: true
evidence: ECO_0000255
source: MF_01320

B5Y973
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-05-03
version: 73
mnemonic: RL6_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP9F49E73E4CE6D15B
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP5DD5C51D738D30F7
annotation: SIPE550661AA78E2D1C
annotation: SIP9C2DB8AA89CBBD20
annotation: PRO_1000143967
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/689
classified with: http://purl.uniprot.org/keywords/699
classified with: GO_1990904
classified with: GO_0005840
classified with: GO_0019843
classified with: GO_0003735
classified with: GO_0006412
sequence: MSRIGKKPVVVPKGVTVTIDGSTVTVKGPKGTLTRTFDPRIKISLIEDQIIVERTSEEKEVRALHGTTRALIQNMVTGVSEGFSVTLKIRGVGYRAELKGKDLQMSLGFSHPVVIQSIEGIQFQVPSADTVVVSGIDKQLVTQVAANIRRYRIPDAYKGKGIWYEGEQRPLKPGKAVGKGK
proteome: Chromosome

B5Y973-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0097
type: Resource
database: eggNOG
comment: Bacteria

http://purl.uniprot.org/gene3d/3.90.930.12
type: Resource
database: Gene3D
comment: Ribosomal protein L6, alpha-beta domain
signature sequence match: Gene3D 3.90.930.12 match 1
signature sequence match: Gene3D 3.90.930.12 match 2

MF 01365 B
type: Resource
database: HAMAP
comment: Ribosomal_L6_B
signature sequence match: HAMAP MF 01365 B match 1

IPR000702
type: Resource
database: InterPro
comment: Ribosomal_L6

IPR020040
type: Resource
database: InterPro
comment: Ribosomal_L6_a/b-dom

IPR036789
type: Resource
database: InterPro
comment: Ribosomal_L6_a/b-dom_sf

IPR019906
type: Resource
database: InterPro
comment: Ribosomal_L6_bac-type

IPR002358
type: Resource
database: InterPro
comment: Ribosomal_L6_CS

PTHR11655:SF14
type: Resource
database: PANTHER
comment: 54S RIBOSOMAL PROTEIN L6, MITOCHONDRIAL
signature sequence match: PANTHER PTHR11655:SF14 match 1

PTHR11655
type: Resource
database: PANTHER
comment: 60S/50S RIBOSOMAL PROTEIN L6/L9
signature sequence match: PANTHER PTHR11655 match 1

PF00347
type: Resource
database: Pfam
comment: Ribosomal_L6
signature sequence match: Pfam PF00347 match 1
signature sequence match: Pfam PF00347 match 2

PIRSF002162
type: Resource
database: PIRSF
comment: Ribosomal_L6
signature sequence match: PIRSF PIRSF002162 match 1

PR00059
type: Resource
database: PRINTS
comment: RIBOSOMALL6

SSF56053
type: Resource
database: SUPFAM
comment: Ribosomal protein L6
signature sequence match: SUPFAM SSF56053 match 1
signature sequence match: SUPFAM SSF56053 match 2

TIGR03654
type: Resource
database: TIGRFAMs
comment: L6_bact
signature sequence match: TIGRFAMs TIGR03654 match 1

PS00525
type: Resource
database: PROSITE
comment: RIBOSOMAL_L6_1
signature sequence match: PROSITE PS00525 match 1

SIP9F49E73E4CE6D15B
type: Structured Name
full name: 50S ribosomal protein L6

rplF
type: Gene
locus name: COPRO5265_0998

SIP5DD5C51D738D30F7
type: Function Annotation
comment: This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.

SIPE550661AA78E2D1C
type: Subunit Annotation
comment: Part of the 50S ribosomal subunit.

SIP9C2DB8AA89CBBD20
type: Similarity Annotation
comment: Belongs to the universal ribosomal protein uL6 family.

PRO_1000143967
type: Chain Annotation
comment: 50S ribosomal protein L6
mass: 19725
range: 18636005791183662tt1tt181

18636005791183662tt1
type: Position
type: ExactPosition
position: 1
reference: MSRIGKKPVVVPKGVTVTIDGSTVTVKGPKGTLTRTFDPRIKISLIEDQIIVERTSEEKEVRALHGTTRALIQNMVTGVSEGFSVTLKIRGVGYRAELKGKDLQMSLGFSHPVVIQSIEGIQFQVPSADTVVVSGIDKQLVTQVAANIRRYRIPDAYKGKGIWYEGEQRPLKPGKAVGKGK

18636005791183662tt181
type: Position
type: ExactPosition
position: 181
reference: MSRIGKKPVVVPKGVTVTIDGSTVTVKGPKGTLTRTFDPRIKISLIEDQIIVERTSEEKEVRALHGTTRALIQNMVTGVSEGFSVTLKIRGVGYRAELKGKDLQMSLGFSHPVVIQSIEGIQFQVPSADTVVVSGIDKQLVTQVAANIRRYRIPDAYKGKGIWYEGEQRPLKPGKAVGKGK

MSRIGKKPVVVPKGVTVTIDGSTVTVKGPKGTLTRTFDPRIKISLIEDQIIVERTSEEKEVRALHGTTRALIQNMVTGVSEGFSVTLKIRGVGYRAELKGKDLQMSLGFSHPVVIQSIEGIQFQVPSADTVVVSGIDKQLVTQVAANIRRYRIPDAYKGKGIWYEGEQRPLKPGKAVGKGK
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 19725

http://purl.uniprot.org/uniprot/B5Y973#attribution-D3FFDDBA2D56707D9D07FF5FE86CC63C
manual: true
evidence: ECO_0000255
source: MF_01365

B5Y931
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 72
mnemonic: RL7_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP28A6812D26DDDB3E
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIPBCAD5D88F04B362D
annotation: SIP2420FAAFBF2738F5
annotation: SIPAE0363EAF790CED5
annotation: PRO_1000121418
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/689
classified with: GO_1990904
classified with: GO_0005840
classified with: GO_0003735
classified with: GO_0006412
sequence: MTIEEIISEIENMSVSQLAELVKALEEKFGVSASMPVAVAAPVAGPAAAAPAEEEKTSFDVILKEAGAKKLEVIKVVREITGLGLKEAKDLVESAPKPIKEGVTKEEAEELKKKLEEAGAVIELQ
proteome: Chromosome

B5Y931-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0222
type: Resource
database: eggNOG
comment: Bacteria

cd00387
type: Resource
database: CDD
comment: Ribosomal_L7_L12
signature sequence match: CDD cd00387 match 1

http://purl.uniprot.org/gene3d/1.20.5.710
type: Resource
database: Gene3D
comment: Single helix bin
signature sequence match: Gene3D 1.20.5.710 match 1

MF_00368
type: Resource
database: HAMAP
comment: Ribosomal_L7_L12
signature sequence match: HAMAP MF 00368 match 1

IPR000206
type: Resource
database: InterPro
comment: Ribosomal_L7/12

IPR014719
type: Resource
database: InterPro
comment: Ribosomal_L7/12_C/ClpS-like

IPR013823
type: Resource
database: InterPro
comment: Ribosomal_L7/L12_C

IPR008932
type: Resource
database: InterPro
comment: Ribosomal_L7/L12_oligo

IPR036235
type: Resource
database: InterPro
comment: Ribosomal_L7/L12_oligo_N_sf

PTHR45987
type: Resource
database: PANTHER
comment: 39S RIBOSOMAL PROTEIN L12
signature sequence match: PANTHER PTHR45987 match 1

PTHR45987:SF4
type: Resource
database: PANTHER
comment: 39S RIBOSOMAL PROTEIN L12, MITOCHONDRIAL
signature sequence match: PANTHER PTHR45987:SF4 match 1

PF00542
type: Resource
database: Pfam
comment: Ribosomal_L12
signature sequence match: Pfam PF00542 match 1

PF16320
type: Resource
database: Pfam
comment: Ribosomal_L12_N
signature sequence match: Pfam PF16320 match 1

SSF54736
type: Resource
database: SUPFAM
comment: ClpS-like
signature sequence match: SUPFAM SSF54736 match 1

SSF48300
type: Resource
database: SUPFAM
comment: Ribosomal protein L7/12, oligomerisation (N-terminal) domain
signature sequence match: SUPFAM SSF48300 match 1

TIGR00855
type: Resource
database: TIGRFAMs
comment: L12
signature sequence match: TIGRFAMs TIGR00855 match 1

SIP28A6812D26DDDB3E
type: Structured Name
full name: 50S ribosomal protein L7/L12

rplL
type: Gene
locus name: COPRO5265_0949

SIPBCAD5D88F04B362D
type: Function Annotation
comment: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.

SIP2420FAAFBF2738F5
type: Subunit Annotation
comment: Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors.

SIPAE0363EAF790CED5
type: Similarity Annotation
comment: Belongs to the bacterial ribosomal protein bL12 family.

PRO_1000121418
type: Chain Annotation
comment: 50S ribosomal protein L7/L12
mass: 13253
range: 18636005790921006tt1tt125

18636005790921006tt1
type: Position
type: ExactPosition
position: 1
reference: MTIEEIISEIENMSVSQLAELVKALEEKFGVSASMPVAVAAPVAGPAAAAPAEEEKTSFDVILKEAGAKKLEVIKVVREITGLGLKEAKDLVESAPKPIKEGVTKEEAEELKKKLEEAGAVIELQ

18636005790921006tt125
type: Position
type: ExactPosition
position: 125
reference: MTIEEIISEIENMSVSQLAELVKALEEKFGVSASMPVAVAAPVAGPAAAAPAEEEKTSFDVILKEAGAKKLEVIKVVREITGLGLKEAKDLVESAPKPIKEGVTKEEAEELKKKLEEAGAVIELQ

MTIEEIISEIENMSVSQLAELVKALEEKFGVSASMPVAVAAPVAGPAAAAPAEEEKTSFDVILKEAGAKKLEVIKVVREITGLGLKEAKDLVESAPKPIKEGVTKEEAEELKKKLEEAGAVIELQ
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 13253

http://purl.uniprot.org/uniprot/B5Y931#attribution-11708D8908E6D7A55FA3E57E4633D9D1
manual: true
evidence: ECO_0000255
source: MF_00368

B5Y878
type: Protein
reviewed: true
created: 2009-04-14
modified: 2023-02-22
version: 70
mnemonic: RL9_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP3FF96EE8EF306212
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP9E6E3B10011ECABC
annotation: SIP68B3470B7E378EAA
annotation: PRO_1000126894
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/689
classified with: http://purl.uniprot.org/keywords/699
classified with: GO_1990904
classified with: GO_0005840
classified with: GO_0019843
classified with: GO_0003735
classified with: GO_0006412
sequence: MKVYLLQDLPGTGKKGQIVDVAEGYARNYLFKNNLAILADEKLIEQVKKREEREQRKEEERYQKALDLKKELEGKAVVVKAPGGETGKLYGAVTTRQIAHALKEQLKLEVDSKDINMPDPIKSVGVYDVDIHLFKDVWATVKVKVEKE
proteome: Chromosome

B5Y878-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG0359
type: Resource
database: eggNOG
comment: Bacteria

http://purl.uniprot.org/gene3d/3.10.430.100
type: Resource
database: Gene3D
comment: Ribosomal protein L9, C-terminal domain
signature sequence match: Gene3D 3.10.430.100 match 1

http://purl.uniprot.org/gene3d/3.40.5.10
type: Resource
database: Gene3D
comment: Ribosomal protein L9, N-terminal domain
signature sequence match: Gene3D 3.40.5.10 match 1

MF_00503
type: Resource
database: HAMAP
comment: Ribosomal_L9
signature sequence match: HAMAP MF 00503 match 1

IPR000244
type: Resource
database: InterPro
comment: Ribosomal_L9

IPR009027
type: Resource
database: InterPro
comment: Ribosomal_L9/RNase_H1_N

IPR020594
type: Resource
database: InterPro
comment: Ribosomal_L9_bac/chp

IPR020069
type: Resource
database: InterPro
comment: Ribosomal_L9_C

IPR036791
type: Resource
database: InterPro
comment: Ribosomal_L9_C_sf

IPR020070
type: Resource
database: InterPro
comment: Ribosomal_L9_N

IPR036935
type: Resource
database: InterPro
comment: Ribosomal_L9_N_sf

PTHR21368:SF18
type: Resource
database: PANTHER
comment: 39S RIBOSOMAL PROTEIN L9, MITOCHONDRIAL
signature sequence match: PANTHER PTHR21368:SF18 match 1

PTHR21368
type: Resource
database: PANTHER
comment: 50S RIBOSOMAL PROTEIN L9
signature sequence match: PANTHER PTHR21368 match 1

PF03948
type: Resource
database: Pfam
comment: Ribosomal_L9_C
signature sequence match: Pfam PF03948 match 1

PF01281
type: Resource
database: Pfam
comment: Ribosomal_L9_N
signature sequence match: Pfam PF01281 match 1

SSF55658
type: Resource
database: SUPFAM
comment: L9 N-domain-like
signature sequence match: SUPFAM SSF55658 match 1

SSF55653
type: Resource
database: SUPFAM
comment: Ribosomal protein L9 C-domain
signature sequence match: SUPFAM SSF55653 match 1

TIGR00158
type: Resource
database: TIGRFAMs
comment: L9
signature sequence match: TIGRFAMs TIGR00158 match 1

SIP3FF96EE8EF306212
type: Structured Name
full name: 50S ribosomal protein L9

rplI
type: Gene
locus name: COPRO5265_0620

SIP9E6E3B10011ECABC
type: Function Annotation
comment: Binds to the 23S rRNA.

SIP68B3470B7E378EAA
type: Similarity Annotation
comment: Belongs to the bacterial ribosomal protein bL9 family.

PRO_1000126894
type: Chain Annotation
comment: 50S ribosomal protein L9
mass: 16837
range: 18636005774407726tt1tt148

18636005774407726tt1
type: Position
type: ExactPosition
position: 1
reference: MKVYLLQDLPGTGKKGQIVDVAEGYARNYLFKNNLAILADEKLIEQVKKREEREQRKEEERYQKALDLKKELEGKAVVVKAPGGETGKLYGAVTTRQIAHALKEQLKLEVDSKDINMPDPIKSVGVYDVDIHLFKDVWATVKVKVEKE

18636005774407726tt148
type: Position
type: ExactPosition
position: 148
reference: MKVYLLQDLPGTGKKGQIVDVAEGYARNYLFKNNLAILADEKLIEQVKKREEREQRKEEERYQKALDLKKELEGKAVVVKAPGGETGKLYGAVTTRQIAHALKEQLKLEVDSKDINMPDPIKSVGVYDVDIHLFKDVWATVKVKVEKE

MKVYLLQDLPGTGKKGQIVDVAEGYARNYLFKNNLAILADEKLIEQVKKREEREQRKEEERYQKALDLKKELEGKAVVVKAPGGETGKLYGAVTTRQIAHALKEQLKLEVDSKDINMPDPIKSVGVYDVDIHLFKDVWATVKVKVEKE
type: Simple Sequence
modified: 2008-11-25
version: 1
mass: 16837

http://purl.uniprot.org/uniprot/B5Y878#attribution-4F835318439D7C7FBE2DB50B58E507CD
manual: true
evidence: ECO_0000255
source: MF_00503

B5Y9X7
type: Protein
reviewed: true
created: 2009-03-24
modified: 2023-02-22
version: 67
mnemonic: RLMH_COPPD
citation: SIP37D9E8E91EBB1099
recommended name: SIP5B591CFAF2299C39
alternative name: SIP1DB615CE4D75808B
alternative name: SIPAE7964E61F9BD6E2
alternative name: SIP16DD80A510D6369A
enzyme: http://purl.uniprot.org/enzyme/2.1.1.177
organism: http://purl.uniprot.org/taxonomy/309798
annotation: SIP5CA524B7302C095B
annotation: SIP9DB1C3248E412830
annotation: SIPF12A90172E877720
annotation: SIPEE295533B6008DE6
annotation: SIP265F35CF449CC6F1
annotation: PRO_0000366584
annotation: SIP2F8CBD472F107825
annotation: SIPD1A4882352EE19D6
annotation: SIP20EE1012536C6156
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/489
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/698
classified with: http://purl.uniprot.org/keywords/949
classified with: GO_0005737
classified with: GO_0070038
sequence: B5Y9X7-1
proteome: Chromosome

B5Y9X7-citation-SIP37D9E8E91EBB1099
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ATCC 35245 / DSM 5265 / OCM 4 / BT
type: Strain

COG1576
type: Resource
database: eggNOG
comment: Bacteria

cd18081
type: Resource
database: CDD
comment: RlmH-like
signature sequence match: CDD cd18081 match 1

MF_00658
type: Resource
database: HAMAP
comment: 23SrRNA_methyltr_H
signature sequence match: HAMAP MF 00658 match 1

IPR029028
type: Resource
database: InterPro
comment: Alpha/beta_knot_MTases

IPR003742
type: Resource
database: InterPro
comment: RlmH-like

IPR029026
type: Resource
database: InterPro
comment: tRNA_m1G_MTases_N

PTHR33603
type: Resource
database: PANTHER
comment: METHYLTRANSFERASE
signature sequence match: PANTHER PTHR33603 match 1

PTHR33603:SF1
type: Resource
database: PANTHER
comment: RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE H
signature sequence match: PANTHER PTHR33603:SF1 match 1

PF02590
type: Resource
database: Pfam
comment: SPOUT_MTase
signature sequence match: Pfam PF02590 match 1

PIRSF004505
type: Resource
database: PIRSF
comment: MT_bac
signature sequence match: PIRSF PIRSF004505 match 1

SSF75217
type: Resource
database: SUPFAM
comment: alpha/beta knot
signature sequence match: SUPFAM SSF75217 match 1

SIP5B591CFAF2299C39
type: Structured Name
full name: Ribosomal RNA large subunit methyltransferase H
ec name: 2.1.1.177

SIP1DB615CE4D75808B
type: Structured Name
full name: 23S rRNA (pseudouridine1915-N3)-methyltransferase

SIPAE7964E61F9BD6E2
type: Structured Name
full name: 23S rRNA m3Psi1915 methyltransferase

SIP16DD80A510D6369A
type: Structured Name
full name: rRNA (pseudouridine-N3-)-methyltransferase RlmH

rlmH
type: Gene
locus name: COPRO5265_1272

SIP5CA524B7302C095B
type: Function Annotation
comment: Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA.

SIPF12A90172E877720
type: Subunit Annotation
comment: Homodimer.

SIP265F35CF449CC6F1
type: Similarity Annotation
comment: Belongs to the RNA methyltransferase RlmH family.

PRO_0000366584
type: Chain Annotation
comment: Ribosomal RNA large subunit methyltransferase H
mass: 16081
range: 18636005793347374tt1tt139

18636005793347374tt1
type: Position
type: ExactPosition
position: 1
reference: B5Y9X7-1