SBGN Bricks Ontology Generated: 20:06:2019 07:00 13:07:2018 10:45 hasSubCategory hasSuperCategory An event involving one or more physical entities that modifies the structure, location or free energy of at least one of the participants. biochemical or transport reaction An event involving one or more chemical entities that modifies the electrochemical structure of at least one of the participants. biochemical reaction association Interaction between several biochemical entities that results in the formation of a non-covalent complex. non-covalent binding Rupture of a covalent bond resulting in the conversion of one physical entity into several physical entities. cleavage Complete disappearance of a physical entity. degradation Transformation of a non-covalent complex that results in the formation of several independent biochemical entities dissociation Biochemical reaction that does not result in the modification of covalent bonds of reactants, but rather modifies the conformation of some reactants, that is the relative position of their atoms in space. conformational transition Biochemical reaction that results in the modification of some covalent bonds. conversion Process through which a DNA sequence is copied to produce a complementary RNA. transcription Process in which a polypeptide chain is produced from a messenger RNA. translation Movement of a physical entity without modification of the structure of the entity. translocation reaction Process that involves the participation of chemical or biological entities and is composed of several elementary steps or reactions. composite biochemical process Covalent reaction that results in the addition of a chemical group on a molecule. addition of a chemical group Covalent reaction that results in the removal of a chemical group from a molecule. removal of a chemical group Addition of a proton (H+) to a chemical entity. protonation Removal of a proton (hydrogen ion H+) from a chemical entity. deprotonation Addition of a methyl group (-CH3) to a chemical entity. methylation Addition of an acetyl group (-COCH3) to a chemical entity. acetylation Addition of a phosphate group (-H2PO4) to a chemical entity. phosphorylation Addition of a saccharide group to a chemical entity. glycosylation Addition of a palmitoyl group (CH3-[CH2]14-CO-) to a chemical entity. palmitoylation Addition of a myristoyl (CH3-[CH2]12-CO-) to a chemical entity. myristoylation Addition of a sulfate group (SO4--) to a chemical entity. sulfation Addition of a prenyl group (generic sense) to a chemical entity. prenylation Covalent linkage to the protein ubiquitin. ubiquitination Addition of an hydroxyl group (-OH) to a chemical entity. hydroxylation Removal of a phosphate group (-H2PO4) from a chemical entity. dephosphorylation Mutual or reciprocal action or influence between molecular entities. molecular or genetic interaction Relationship between molecular entities, based on contacts, direct or indirect. molecular interaction A sequential series of actions, motions, or occurrences, such as chemical reactions, that affect one or more entities in a phenomenologically characteristic manner. process Decomposition of a compound by reaction with water, where the hydroxyl and H groups are incorporated into different products hydrolysis An equivocal or conjectural process, whose existence is assumed but not proven. uncertain process One or more processes that are not represented in certain representations or interpretations of a model. omitted process The process by which two or more proteins interact non-covalently to form a protein complex. protein complex formation A transport reaction which results in the entry of the transported entity, into the cell. transcellular membrane influx reaction A transport reaction which results in the removal of the transported entity from the cell. transcellular membrane efflux reaction A sequential series of actions, motions, or occurrences, such as chemical reactions, where a reversal of states that bring the system back to its original state in a characteristic manner occurs. reversible process A sequential series of actions, motions, or occurrences, such as chemical reactions, where a reversal of states that bring the system back to its original state in a characteristic manner does not occur. irreversible process A biochemical process involving the simultaneous transport of two or more substances across a membrane via a protein or protein complex. co-transport reaction The movement of an entity/entities across a biological membrane mediated by a transporter protein. transport reaction A conformational change in a protein resulting in its activation. activation Protein assisted movement of molecules across a membrane from a region of low concentration to high concentration involving the consumption of cellular energy (ATP molecules). active transport Movement of molecules without the need for external energy, and usually from a region of high concentration to low concentration. passive transport A membrane protein mediated transport of two ore more molecules in the same relative direction across a membrane. symporter-mediated transport A membrane protein mediated transport of two or more molecules in opposite directions across a membrane. antiporter-mediated transport Interacting selectively and non-covalently with an RNA sequence in order to modulate transcription. This function is known to occur in phages and viruses, for example the lambda N and the HIV tat proteins are necessary to allow RNA polymerase to read through terminator sequences. RNA-binding transcription regulator activity Interacting selectively and non-covalently with a specific DNA sequence in order to activate or increase the frequency, rate or extent of transcription by a RNA polymerase. DNA-binding transcription activator activity nteracting selectively and non-covalently with a specific DNA sequence in order to stop, prevent, or reduce the frequency, rate or extent of transcription by a RNA polymerase. DNA-binding transcription repressor activity A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs. These actions are described from two distinct but related perspectives: (1) biochemical activity, and (2) role as a component in a larger system/process. molecular function DNA binding transcription factor activity gene-specific transcription factor activity A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. DNA-binding transcription factor activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. catalytic activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. protein kinase activity phosphoprotein phosphohydrolase activity protein phosphatase activity Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity. phosphoprotein phosphatase activity Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. ubiquitin-protein transferase activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells. transporter activity The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule. binding protein amino acid binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). protein binding A biological process represents a specific objective that the organism is genetically programmed to achieve. Biological processes are often described by their outcome or ending state, e.g., the biological process of cell division results in the creation of two daughter cells (a divided cell) from a single parent cell. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence. biological process Catalysis of the transfer of a methyl group to an acceptor molecule. methyltransferase activity Catalysis of the transfer of a methyl group (CH3-) to a protein. protein methyltransferase activity Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein. protein prenyltransferase activity Catalysis of the reaction: palmitoyl-protein + H2O = palmitate + protein. palmitoyl-(protein) hydrolase activity phosphokinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. kinase activity Catalysis of the transfer of an acetyl group to an acceptor molecule. acetyltransferase activity Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule. palmitoyltransferase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. oxidoreductase activity Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2. transferase activity Catalysis of the transfer of a one-carbon group from one compound (donor) to another (acceptor). transferase activity, transferring one-carbon groups Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor). transferase activity, transferring acyl groups Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor). transferase activity, transferring acyl groups other than amino-acyl groups glycosyltransferase activity transglycosidase activity transglycosylase activity Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor). transferase activity, transferring glycosyl groups Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor). transferase activity, transferring phosphorus-containing groups Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. hydrolase activity Catalysis of the hydrolysis of any ester bond. hydrolase activity, acting on ester bonds phosphoric monoester hydrolase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate. phosphatase activity glycosidase activity Catalysis of the hydrolysis of any glycosyl bond. hydrolase activity, acting on glycosyl bonds Catalysis of the hydrolysis of an acetyl group or groups from a substrate molecule. deacetylase activity Catalysis of the removal of an amino group from a substrate, producing ammonia (NH3). deaminase activity small conjugating protein transferase activity Catalysis of the transfer of a ubiquitin-like from one protein to another via the reaction X-ULP + Y --> Y-ULP + X, where both X-ULP and Y-ULP are covalent linkages. ULP represents a ubiquitin-like protein. ubiquitin-like protein transferase activity Catalysis of the removal of a methyl group from a substrate. demethylase activity Catalysis of the hydrolysis of an acetyl group or groups from a protein substrate. protein deacetylase activity Catalysis of the hydrolysis of any glycosyl bond of a protein. protein glycosidase activity Interacting selectively and non-covalently with a domain within the same polypeptide. protein self-association Catalysis of a hydrolase reaction that removes a palmitoyl moiety from some substrate. palmitoyl hydrolase activity deubiquitinase activity Catalysis of the hydrolysis of ubiquitin from proteins and other molecules. ubiquitinyl hydrolase activity Catalytic activity that acts to modify a protein. catalytic activity, acting on a protein A molecular function that controls the rate, timing and/or magnitude of transcription of genetic information. The function of transcriptional regulators is to modulate gene expression at the transcription step so that they are expressed in the right cell at the right time and in the right amount throughout the life of the cell and the organism. transcription regulator activity category Catalysis of the addition of an hydroxyl group on a substrate. hydroxylase activity Stimulation of a biochemical reaction. stimulatory activity http://sbgnbricks.org/static/bricks/catalytic_activity-PD-narrow_1.png catalytic activity (PD narrow 1) http://sbgnbricks.org/static/bricks/catalytic_activity-PD-narrow_2.png catalytic activity (PD narrow 2) Modulation of a biochemical reaction. modulatory activity http://sbgnbricks.org/static/bricks/stimulatory_activity-PD-narrow_1.png stimulatory activity (PD narrow 1) http://sbgnbricks.org/static/bricks/stimulatory_activity-ER-narrow_1.png stimulatory activity (ER narrow 1) http://sbgnbricks.org/static/bricks/stimulatory_activity-ER-narrow_2.png stimulatory activity (ER narrow 2) http://sbgnbricks.org/static/bricks/stimulatory_activity-ER-narrow_3.png stimulatory activity (ER narrow 3) http://sbgnbricks.org/static/bricks/stimulatory_activity-ER-narrow_4.png stimulatory activity (ER narrow 4) http://sbgnbricks.org/static/bricks/stimulatory_activity-ER-narrow_5.png stimulatory activity (ER narrow 5) http://sbgnbricks.org/static/bricks/stimulatory_activity-ER-narrow_6.png stimulatory activity (ER narrow 6) http://sbgnbricks.org/static/bricks/stimulatory_activity-PD-narrow_3.png stimulatory activity (PD narrow 3) http://sbgnbricks.org/static/bricks/modulatory_activity-PD-narrow_2.png stimulatory activity (PD narrow 2) http://sbgnbricks.org/static/bricks/modulatory_activity-PD-narrow_1.png modulatory activity (PD narrow 1) http://sbgnbricks.org/static/bricks/modulatory_activity-ER-narrow_1.png modulatory activity (ER narrow 1) http://sbgnbricks.org/static/bricks/modulatory_activity-ER-narrow_2.png modulatory activity (ER narrow 2) http://sbgnbricks.org/static/bricks/modulatory_activity-ER-narrow_3.png modulatory activity (ER narrow 3) http://sbgnbricks.org/static/bricks/modulatory_activity-ER-narrow_4.png modulatory activity (ER narrow 4) http://sbgnbricks.org/static/bricks/modulatory_activity-ER-narrow_5.png modulatory activity (ER narrow 5) http://sbgnbricks.org/static/bricks/modulatory_activity-ER-narrow_6.png modulatory activity (ER narrow 6) http://sbgnbricks.org/static/bricks/modulatory_activity-PD-narrow_3.png modulatory activity (PD narrow 3) http://sbgnbricks.org/static/bricks/modulatory_activity-PD-narrow_2.png modulatory activity (PD narrow 2) Catalysis of the addition of an hydroxyl group on a protein. protein hydroxylase activity http://sbgnbricks.org/static/bricks/protein_hydroxylase_activity-PD-narrow_1.png protein hydroxylase activity (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_hydroxylase_activity-PD-narrow_2.png protein hydroxylase activity (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_hydroxylase_activity-PD-narrow_4.png protein hydroxylase activity (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_hydroxylase_activity-PD-narrow_3.png protein hydroxylase activity (PD narrow 3) http://sbgnbricks.org/static/bricks/catalytic_activity,_adding_a_chemical_group_on_a_protein-PD-narrow_1.png catalytic activity, adding a chemical group on a protein (PD narrow 1) http://sbgnbricks.org/static/bricks/catalytic_activity,_adding_a_chemical_group_on_a_protein-PD-narrow_2.png catalytic activity, adding a chemical group on a protein (PD narrow 2) http://sbgnbricks.org/static/bricks/catalytic_activity,_adding_a_chemical_group_on_a_protein-PD-narrow_4.png catalytic activity, adding a chemical group on a protein (PD narrow 4) http://sbgnbricks.org/static/bricks/catalytic_activity,_adding_a_chemical_group_on_a_protein-PD-narrow_3.png catalytic activity, adding a chemical group on a protein (PD narrow 3) http://sbgnbricks.org/static/bricks/catalytic_activity,_acting_on_a_protein-PD-narrow_1.png catalytic activity, acting on a protein (PD narrow 1) catalytic activity, adding a chemical group on a protein http://sbgnbricks.org/static/bricks/catalytic_activity,_acting_on_a_protein-PD-narrow_2.png catalytic activity, acting on a protein (PD narrow 2) http://sbgnbricks.org/static/bricks/catalytic_activity,_acting_on_a_protein-PD-narrow_4.png catalytic activity, acting on a protein (PD narrow 4) http://sbgnbricks.org/static/bricks/catalytic_activity,_acting_on_a_protein-PD-narrow_3.png catalytic activity, acting on a protein (PD narrow 3) http://sbgnbricks.org/static/bricks/catalytic_activity,_activating_a_protein-PD-narrow_1.png catalytic activity, activating a protein (PD narrow 1) combined necessary stimulation of binding activities on another biological activity combined necessary stimulation of biological activities on another biological activity http://sbgnbricks.org/static/bricks/combined_necessary_stimulation_of_binding_activities_on_another_biological_activity-AF-main.png combined necessary stimulation of binding activities on another biological activity (AF main) combined positive influence of biological activities on another biological activity http://sbgnbricks.org/static/bricks/combined_necessary_stimulation_of_biological_activities_on_another_biological_activity-AF-main.png combined necessary stimulation of biological activities on another biological activity (AF main) combined influence of biological activities on another biological activity http://sbgnbricks.org/static/bricks/combined_positive_influence_of_biological_activities_on_another_biological_activity-AF-main.png combined positive influence of biological activities on another biological activity (AF main) combined influence of biological activities on another biological activity or a biological process http://sbgnbricks.org/static/bricks/combined_influence_of_biological_activities_on_another_biological_activity-AF-main.png combined influence of biological activities on another biological activity (AF main) Influence of a biological activity on another biological activity or on a biological process. influence of a biological activity on another biological activity or a biological process AF brick term brick combined positive influence of a DNA-binding transcription activator activity and a biological activity on another biological activity combined positive influence of two biological activities on another biological activity http://sbgnbricks.org/static/bricks/combined_positive_influence_of_a_DNA-binding_transcription_activator_activity_and_a_biological_activity_on_another_biological_activity-AF-main.png combined positive influence of a DNA-binding transcription activator activity and a biological activity on another biological activity (AF main) http://sbgnbricks.org/static/bricks/combined_positive_influence_of_two_biological_activities_on_another_biological_activity-AF-main.png combined positive influence of two biological activities on another biological activity (AF main) simple necessary stimulation of a binding activity on another biological activity Necessary stimulation of a biological activity on another biological activity. simple necessary stimulation of a biological activity on another biological activity http://sbgnbricks.org/static/bricks/simple_necessary_stimulation_of_a_binding_activity_on_another_biological_activity-AF-main.png simple necessary stimulation of a binding activity on another biological activity (AF main) Positive influence of a biological activity on another biological activity. simple positive influence of a biological activity on another biological activity http://sbgnbricks.org/static/bricks/simple_necessary_stimulation_of_a_biological_activity_on_another_biological_activity-AF-main.png simple necessary stimulation of a biological activity on another biological activity (AF main) Influence of a biological activity on another biological activity. simple influence of a biological activity on another biological activity http://sbgnbricks.org/static/bricks/simple_positive_influence_of_a_biological_activity_on_another_biological_activity-AF-main.png simple positive influence of a biological activity on another biological activity (AF main) Influence of a biological activity on another biological activity or on a biological process. simple influence of a biological activity on another biological activity or a biological process http://sbgnbricks.org/static/bricks/simple_influence_of_a_biological_activity_on_another_biological_activity-AF-main.png simple influence of a biological activity on another biological activity (AF main) simple negative influence of a phosphoprotein phosphatase activity on another biological activity Negative influence of a biological activity on another biological activity. simple negative influence of a biological activity on another biological activity http://sbgnbricks.org/static/bricks/simple_negative_influence_of_a_phosphoprotein_phosphatase_activity_on_another_biological_activity-AF-main.png simple negative influence of a phosphoprotein phosphatase activity on another biological activity (AF main) http://sbgnbricks.org/static/bricks/simple_negative_influence_of_a_biological_activity_on_another_biological_activity-AF-main.png simple negative influence of a biological activity on another biological activity (AF main) simple positive influence of a protein kinase activity on another biological activity http://sbgnbricks.org/static/bricks/simple_positive_influence_of_a_protein_kinase_activity_on_another_biological_activity-AF-main.png simple positive influence of a protein kinase activity on another biological activity (AF main) simple positive influence of a transporter activity on another biological activity http://sbgnbricks.org/static/bricks/simple_positive_influence_of_a_transporter_activity_on_another_biological_activity-AF-main.png simple positive influence of a transporter activity on another biological activity (AF main) AF SBGN language ER PD Influence of a biological activity on a biological process. simple influence of a biological activity on a biological process http://sbgnbricks.org/static/bricks/simple_influence_of_a_biological_activity_on_a_biological_process-AF-main.png simple influence of a biological activity on a biological process (AF main) Necessary stimulation of a biological activity on a biological process. simple necessary stimulation of a biological activity on a biological process Positive influence of a biological activity on a biological process. simple positive influence of a biological activity on a biological process http://sbgnbricks.org/static/bricks/simple_necessary_stimulation_of_a_biological_activity_on_a_biological_process-AF-main.png simple necessary stimulation of a biological activity on a biological process (AF main) http://sbgnbricks.org/static/bricks/simple_positive_influence_of_a_biological_activity_on_a_biological_process-AF-main.png simple positive influence of a biological activity on a biological process (AF main) Negative influence of a biological activity on a biological process. simple negative influence of a biological activity on a biological process http://sbgnbricks.org/static/bricks/simple_negative_influence_of_a_biological_activity_on_a_biological_process-AF-main.png simple negative influence of a biological activity on a biological process (AF main) http://sbgnbricks.org/static/bricks/transport_reaction-ER-main.png transport reaction (ER main) http://sbgnbricks.org/static/bricks/transporter_activity-AF-main.png transporter activity (AF main) http://sbgnbricks.org/static/bricks/transport_reaction-PD-narrow_1.png transport reaction (PD narrow 1) http://sbgnbricks.org/static/bricks/transport_reaction-PD-narrow_2.png transport reaction (PD narrow 2) http://sbgnbricks.org/static/bricks/molecular_function-AF-main.png molecular function (AF main) ER brick PD brick Removal of an acetyl group from a chemical entity. deacetylation http://sbgnbricks.org/static/bricks/deacetylation-ER-main.png deacetylation (ER main) http://sbgnbricks.org/static/bricks/removal_of_a_chemical_group-ER-main.png removal of a chemical group (ER main) Removal of a saccharide group from a chemical entity. deglycosylation http://sbgnbricks.org/static/bricks/deglycosylation-ER-main.png deglycosylation (ER main) Removal of an hydroxyl group from a chemical entity. dehydroxylation http://sbgnbricks.org/static/bricks/dehydroxylation-ER-main.png dehydroxylation (ER main) Removal of a myristoyl group from a chemical entity. demyristoylation http://sbgnbricks.org/static/bricks/demyristoylation-ER-main.png demyristoylation (ER main) Removal of a palmitoyl group from a chemical entity. depalmitoylation http://sbgnbricks.org/static/bricks/depalmitoylation-ER-main.png depalmitoylation (ER main) Removal of a prenyl group from a chemical entity. deprenylation http://sbgnbricks.org/static/bricks/deprenylation-ER-main.png deprenylation (ER main) Removal of a sulfate group from a chemical entity. desulfation http://sbgnbricks.org/static/bricks/desulfation-ER-main.png desulfation (ER main) Removal of a ubuquitin protein from a chemical entity. deubiquitination http://sbgnbricks.org/static/bricks/deubiquitination-ER-main.png deubiquitination (ER main) Removal of an acetyl group from a protein. protein deacetylation Covalent reaction that results in the removal of a chemical group from a protein. removal of a chemical group from a protein http://sbgnbricks.org/static/bricks/protein_deacetylation-ER-main.png protein deacetylation (ER main) http://sbgnbricks.org/static/bricks/protein_deacetylation-PD-narrow_1.png protein deacetylation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_deacetylation-PD-narrow_2.png protein deacetylation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_deacetylation-PD-narrow_4.png protein deacetylation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_deacetylation-PD-narrow_3.png protein deacetylation (PD narrow 3) http://sbgnbricks.org/static/bricks/removal_of_a_chemical_group_from_a_protein-ER-main.png removal of a chemical group from a protein (ER main) http://sbgnbricks.org/static/bricks/removal_of_a_chemical_group_from_a_protein-PD-narrow_1.png removal of a chemical group from a protein (PD narrow 1) http://sbgnbricks.org/static/bricks/removal_of_a_chemical_group_from_a_protein-PD-narrow_2.png removal of a chemical group from a protein (PD narrow 2) http://sbgnbricks.org/static/bricks/removal_of_a_chemical_group_from_a_protein-PD-narrow_4.png removal of a chemical group from a protein (PD narrow 4) http://sbgnbricks.org/static/bricks/removal_of_a_chemical_group_from_a_protein-PD-narrow_3.png removal of a chemical group from a protein (PD narrow 3) http://sbgnbricks.org/static/bricks/irreversible_process-PD-main.png irreversible process (PD main) Removal of a saccharide group from a protein. protein deglycosylation http://sbgnbricks.org/static/bricks/protein_deglycosylation-ER-main.png protein deglycosylation (ER main) http://sbgnbricks.org/static/bricks/protein_deglycosylation-PD-narrow_1.png protein deglycosylation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_deglycosylation-PD-narrow_2.png protein deglycosylation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_deglycosylation-PD-narrow_4.png protein deglycosylation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_deglycosylation-PD-narrow_3.png protein deglycosylation (PD narrow 3) Removal of an hydroxyl group from a protein. protein dehydroxylation http://sbgnbricks.org/static/bricks/protein_dehydroxylation-ER-main.png protein dehydroxylation (ER main) http://sbgnbricks.org/static/bricks/protein_dehydroxylation-PD-narrow_1.png protein dehydroxylation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_dehydroxylation-PD-narrow_2.png protein dehydroxylation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_dehydroxylation-PD-narrow_4.png protein dehydroxylation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_dehydroxylation-PD-narrow_3.png protein dehydroxylation (PD narrow 3) Removal of a myristoyl group from a protein. protein demyristoylation http://sbgnbricks.org/static/bricks/protein_demyristoylation-ER-main.png protein demyristoylation (ER main) http://sbgnbricks.org/static/bricks/protein_demyristoylation-PD-narrow_1.png protein demyristoylation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_demyristoylation-PD-narrow_2.png protein demyristoylation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_demyristoylation-PD-narrow_4.png protein demyristoylation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_demyristoylation-PD-narrow_3.png protein demyristoylation (PD narrow 3) Removal of a palmitoyl group from a protein. protein depalmitoylation http://sbgnbricks.org/static/bricks/protein_depalmitoylation-ER-main.png protein depalmitoylation (ER main) http://sbgnbricks.org/static/bricks/protein_depalmitoylation-PD-narrow_1.png protein depalmitoylation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_depalmitoylation-PD-narrow_2.png protein depalmitoylation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_depalmitoylation-PD-narrow_4.png protein depalmitoylation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_depalmitoylation-PD-narrow_3.png protein depalmitoylation (PD narrow 3) Removal of a prenyl group from a protein. protein deprenylation http://sbgnbricks.org/static/bricks/protein_deprenylation-ER-main.png protein deprenylation (ER main) http://sbgnbricks.org/static/bricks/protein_deprenylation-PD-narrow_1.png protein deprenylation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_deprenylation-PD-narrow_2.png protein deprenylation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_deprenylation-PD-narrow_4.png protein deprenylation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_deprenylation-PD-narrow_3.png protein deprenylation (PD narrow 3) Removal of a sulfate group from a protein. protein desulfation http://sbgnbricks.org/static/bricks/protein_desulfation-ER-main.png protein desulfation (ER main) http://sbgnbricks.org/static/bricks/protein_desulfation-PD-narrow_1.png protein desulfation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_desulfation-PD-narrow_2.png protein desulfation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_desulfation-PD-narrow_4.png protein desulfation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_desulfation-PD-narrow_3.png protein desulfation (PD narrow 3) Removal of a ubuquitin protein from a protein. protein deubiquitination http://sbgnbricks.org/static/bricks/protein_deubiquitination-ER-main.png protein deubiquitination (ER main) http://sbgnbricks.org/static/bricks/protein_deubiquitination-PD-narrow_1.png protein deubiquitination (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_deubiquitination-PD-narrow_2.png protein deubiquitination (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_deubiquitination-PD-narrow_4.png protein deubiquitination (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_deubiquitination-PD-narrow_3.png protein deubiquitination (PD narrow 3) Transformation of a non-covalent protein complex that results in the formation of several independent proteins protein complex dissociation http://sbgnbricks.org/static/bricks/protein_complex_dissociation-PD-narrow_1.png protein complex dissociation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_complex_dissociation-PD-narrow_2.png protein complex dissociation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_complex_dissociation-PD-narrow_3.png protein complex dissociation (PD narrow 3) http://sbgnbricks.org/static/bricks/dissociation-PD-narrow_1.png dissociation (PD narrow 1) http://sbgnbricks.org/static/bricks/dissociation-PD-narrow_2.png dissociation (PD narrow 2) http://sbgnbricks.org/static/bricks/dissociation-PD-narrow_3.png dissociation (PD narrow 3) Transformation of a protein multimer that results in the formation of several independent pseudo-identical proteins protein multimer dissociation http://sbgnbricks.org/static/bricks/protein_multimer_dissociation-PD-main.png protein multimer dissociation (PD main) http://sbgnbricks.org/static/bricks/hydrolase_activity-AF-main.png hydrolase activity (AF main) catalytic activity, removing a chemical group from a protein http://sbgnbricks.org/static/bricks/protein_glycosidase_activity-ER-broad_1.png protein glycosidase activity (ER broad 1) http://sbgnbricks.org/static/bricks/protein_glycosidase_activity-ER-broad_3.png protein glycosidase activity (ER broad 3) http://sbgnbricks.org/static/bricks/protein_glycosidase_activity-ER-broad_2.png protein glycosidase activity (ER broad 2) http://sbgnbricks.org/static/bricks/protein_glycosidase_activity-AF-main.png protein glycosidase activity (AF main) http://sbgnbricks.org/static/bricks/protein_glycosidase_activity-PD-narrow_1.png protein glycosidase activity (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_glycosidase_activity-PD-narrow_2.png protein glycosidase activity (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_glycosidase_activity-PD-narrow_4.png protein glycosidase activity (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_glycosidase_activity-PD-narrow_3.png protein glycosidase activity (PD narrow 3) http://sbgnbricks.org/static/bricks/glycosidase_activity-AF-main.png glycosidase activity (AF main) http://sbgnbricks.org/static/bricks/catalytic_activity,_removing_a_chemical_group_from_a_protein-PD-narrow_1.png catalytic activity, removing a chemical group from a protein (PD narrow 1) http://sbgnbricks.org/static/bricks/catalytic_activity,_removing_a_chemical_group_from_a_protein-PD-narrow_2.png catalytic activity, removing a chemical group from a protein (PD narrow 2) http://sbgnbricks.org/static/bricks/catalytic_activity,_removing_a_chemical_group_from_a_protein-PD-narrow_4.png catalytic activity, removing a chemical group from a protein (PD narrow 4) http://sbgnbricks.org/static/bricks/catalytic_activity,_removing_a_chemical_group_from_a_protein-PD-narrow_3.png catalytic activity, removing a chemical group from a protein (PD narrow 3) http://sbgnbricks.org/static/bricks/catalytic_activity,_activating_a_protein-PD-narrow_2.png catalytic activity, activating a protein (PD narrow 2) http://sbgnbricks.org/static/bricks/catalytic_activity,_activating_a_protein-PD-narrow_4.png catalytic activity, activating a protein (PD narrow 4) http://sbgnbricks.org/static/bricks/catalytic_activity,_activating_a_protein-PD-narrow_3.png catalytic activity, activating a protein (PD narrow 3) Catalytic activity that acts to activate a protein. catalytic activity, activating a protein http://sbgnbricks.org/static/bricks/catalytic_activity,_activating_a_protein-PD-broad_1.png catalytic activity, activating a protein (PD broad 1) http://sbgnbricks.org/static/bricks/transferase_activity-AF-main.png transferase activity (AF main) catalytic activity, acting on simple chemicals Catalysis of a metabolic reaction, one whose reactants and products are small molecules. metabolic catalytic activity http://sbgnbricks.org/static/bricks/metabolic_catalytic_activity-PD-narrow_1.png metabolic catalytic activity (PD narrow 1) http://sbgnbricks.org/static/bricks/metabolic_catalytic_activity-PD-narrow_2.png metabolic catalytic activity (PD narrow 2) An equivocal or conjectural irreversible process, whose existence is assumed but not proven. uncertain irreversible process http://sbgnbricks.org/static/bricks/uncertain_irreversible_process-PD-main.png uncertain irreversible process (PD main) http://sbgnbricks.org/static/bricks/uncertain_irreversible_process-PD-main.png uncertain reversible process (PD main) An equivocal or conjectural reversible process, whose existence is assumed but not proven. uncertain reversible process http://sbgnbricks.org/static/bricks/binding-AF-main.png binding (AF main) http://sbgnbricks.org/static/bricks/non-covalent_binding-PD-narrow_1.png non-covalent binding (PD narrow 1) http://sbgnbricks.org/static/bricks/non-covalent_binding-PD-narrow_2.png non-covalent binding (PD narrow 2) http://sbgnbricks.org/static/bricks/non-covalent_binding-PD-narrow_3.png non-covalent binding (PD narrow 3) http://sbgnbricks.org/static/bricks/non-covalent_binding-ER-main.png non-covalent binding (ER main) A conformational change in a protein resulting in its deactivation. deactivation http://sbgnbricks.org/static/bricks/deactivation-PD-narrow_3.png deactivation (PD broad 1) http://sbgnbricks.org/static/bricks/deactivation-ER-main.png deactivation (ER main) http://sbgnbricks.org/static/bricks/deactivation-PD-narrow_1.png deactivation (PD narrow 1) http://sbgnbricks.org/static/bricks/deactivation-PD-narrow_2.png deactivation (PD narrow 2) http://sbgnbricks.org/static/bricks/deactivation-PD-narrow_3.png deactivation (PD narrow 3) http://sbgnbricks.org/static/bricks/deactivation-PD-narrow_4.png deactivation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_binding-ER-narrow_1.png protein binding (ER narrow 1) http://sbgnbricks.org/static/bricks/protein_binding-PD-narrow_2.png protein binding (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_binding-ER-narrow_2.png protein binding (ER narrow 2) http://sbgnbricks.org/static/bricks/protein_binding-PD-narrow_1.png protein binding (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_binding-PD-narrow_3.png protein binding (PD narrow 3) http://sbgnbricks.org/static/bricks/protein_self-association-ER-main.png protein self-association (ER main) The process by which a number of pseudo-identical proteins interact non-covalently to form a protein multimer. protein multimerisation http://sbgnbricks.org/static/bricks/protein_multimerisation-ER-main.png protein multimerisation (ER main) http://sbgnbricks.org/static/bricks/protein_multimerisation-PD-main.png protein multimerisation (PD main) http://sbgnbricks.org/static/bricks/protein_complex_formation-ER-main.png protein complex formation (ER main) http://sbgnbricks.org/static/bricks/protein_complex_formation-PD-narrow_1.png protein complex formation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_complex_formation-PD-narrow_2.png protein complex formation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_complex_formation-PD-narrow_3.png protein complex formation (PD narrow 3) http://sbgnbricks.org/static/bricks/phosphoprotein_phosphatase_activity-ER-broad_1.png phosphoprotein phosphatase activity (ER broad 1) http://sbgnbricks.org/static/bricks/phosphoprotein_phosphatase_activity-ER-broad_3.png phosphoprotein phosphatase activity (ER broad 3) http://sbgnbricks.org/static/bricks/phosphoprotein_phosphatase_activity-ER-broad_2.png phosphoprotein phosphatase activity (ER broad 2) http://sbgnbricks.org/static/bricks/phosphoprotein_phosphatase_activity-AF-main.png phosphoprotein phosphatase activity (AF main) http://sbgnbricks.org/static/bricks/phosphoprotein_phosphatase_activity-PD-narrow_2.png phosphoprotein phosphatase activity (PD narrow 2) http://sbgnbricks.org/static/bricks/phosphoprotein_phosphatase_activity-PD-narrow_1.png phosphoprotein phosphatase activity (PD narrow 1) http://sbgnbricks.org/static/bricks/phosphoprotein_phosphatase_activity-PD-narrow_4.png phosphoprotein phosphatase activity (PD narrow 4) http://sbgnbricks.org/static/bricks/phosphoprotein_phosphatase_activity-PD-narrow_3.png phosphoprotein phosphatase activity (PD narrow 3) http://sbgnbricks.org/static/bricks/phosphoprotein_phosphatase_activity-AF-synonym_2.png phosphoprotein phosphatase activity (AF synonym 2) http://sbgnbricks.org/static/bricks/phosphoprotein_phosphatase_activity-AF-synonym_1.png phosphoprotein phosphatase activity (AF synonym 1) Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3. https://identifiers.org/quickgo/GO:0042578 phosphoric ester hydrolase activity http://sbgnbricks.org/static/bricks/phosphatase_activity-AF-main.png phosphatase activity (AF main) Catalysis of the transfer of an acetyl group to an acceptor protein. protein acetyltransferase activity http://sbgnbricks.org/static/bricks/protein_acetyltransferase_activity-ER-broad_2.png protein acetyltransferase activity (ER broad 2) http://sbgnbricks.org/static/bricks/protein_acetyltransferase_activity-ER-broad_1.png protein acetyltransferase activity (ER broad 1) http://sbgnbricks.org/static/bricks/protein_acetyltransferase_activity-ER-broad_3.png protein acetyltransferase activity (ER broad 3) http://sbgnbricks.org/static/bricks/protein_acetyltransferase_activity-AF-main.png protein acetyltransferase activity (AF main) http://sbgnbricks.org/static/bricks/protein_acetyltransferase_activity-PD-narrow_2.png protein acetyltransferase activity (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_acetyltransferase_activity-PD-narrow_1.png protein acetyltransferase activity (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_acetyltransferase_activity-PD-narrow_4.png protein acetyltransferase activity (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_acetyltransferase_activity-PD-narrow_3.png protein acetyltransferase activity (PD narrow 3) http://sbgnbricks.org/static/bricks/acetyltransferase_activity-AF-main.png acetyltransferase activity (AF main) Catalysis of the removal of a methyl group from a substrate protein. protein demethylase activity http://sbgnbricks.org/static/bricks/protein_demethylase_activity-ER-broad_2.png protein demethylase activity (ER broad 2) http://sbgnbricks.org/static/bricks/protein_demethylase_activity-ER-broad_1.png protein demethylase activity (ER broad 1) http://sbgnbricks.org/static/bricks/protein_demethylase_activity-ER-broad_3.png protein demethylase activity (ER broad 3) http://sbgnbricks.org/static/bricks/protein_demethylase_activity-AF-main.png protein demethylase activity (AF main) http://sbgnbricks.org/static/bricks/protein_demethylase_activity-PD-narrow_1.png protein demethylase activity (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_demethylase_activity-PD-narrow_2.png protein demethylase activity (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_demethylase_activity-PD-narrow_4.png protein demethylase activity (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_demethylase_activity-PD-narrow_3.png protein demethylase activity (PD narrow 3) http://sbgnbricks.org/static/bricks/demethylase_activity-AF-main.png demethylase activity (AF main) Catalysis of the transfer of a glycosyl group from one compound (donor) to a protein (acceptor). protein glycosyltransferase activity http://sbgnbricks.org/static/bricks/protein_glycosyltransferase_activity-ER-broad_3.png protein glycosyltransferase activity (ER broad 3) http://sbgnbricks.org/static/bricks/protein_glycosyltransferase_activity-ER-broad_2.png protein glycosyltransferase activity (ER broad 2) http://sbgnbricks.org/static/bricks/protein_glycosyltransferase_activity-ER-broad_1.png protein glycosyltransferase activity (ER broad 1) http://sbgnbricks.org/static/bricks/protein_glycosyltransferase_activity-AF-main.png protein glycosyltransferase activity (AF main) http://sbgnbricks.org/static/bricks/protein_glycosyltransferase_activity-PD-narrow_2.png protein glycosyltransferase activity (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_glycosyltransferase_activity-PD-narrow_1.png protein glycosyltransferase activity (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_glycosyltransferase_activity-PD-narrow_4.png protein glycosyltransferase activity (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_glycosyltransferase_activity-PD-narrow_3.png protein glycosyltransferase activity (PD narrow 3) http://sbgnbricks.org/static/bricks/transferase_activity,_transferring_glycosyl_groups-AF-main.png transferase activity, transferring glycosyl groups (AF main) http://sbgnbricks.org/static/bricks/transferase_activity,_transferring_glycosyl_groups-AF-synonym_3.png transferase activity, transferring glycosyl groups (AF synonym 3) http://sbgnbricks.org/static/bricks/transferase_activity,_transferring_glycosyl_groups-AF-synonym_2.png transferase activity, transferring glycosyl groups (AF synonym 2) http://sbgnbricks.org/static/bricks/transferase_activity,_transferring_glycosyl_groups-AF-synonym_1.png transferase activity, transferring glycosyl groups (AF synonym 1) http://sbgnbricks.org/static/bricks/protein_deacetylase_activity-ER-broad_2.png protein deacetylase activity (ER broad 2) http://sbgnbricks.org/static/bricks/protein_deacetylase_activity-ER-broad_1.png protein deacetylase activity (ER broad 1) http://sbgnbricks.org/static/bricks/protein_deacetylase_activity-ER-broad_3.png protein deacetylase activity (ER broad 3) http://sbgnbricks.org/static/bricks/protein_deacetylase_activity-AF-main.png protein deacetylase activity (AF main) http://sbgnbricks.org/static/bricks/protein_deacetylase_activity-PD-narrow_2.png protein deacetylase activity (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_deacetylase_activity-PD-narrow_1.png protein deacetylase activity (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_deacetylase_activity-PD-narrow_4.png protein deacetylase activity (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_deacetylase_activity-PD-narrow_3.png protein deacetylase activity (PD narrow 3) http://sbgnbricks.org/static/bricks/deacetylase_activity-AF-main.png deacetylase activity (AF main) http://sbgnbricks.org/static/bricks/protein_kinase_activity-ER-broad_1.png protein kinase activity (ER broad 1) http://sbgnbricks.org/static/bricks/protein_kinase_activity-ER-broad_2.png protein kinase activity (ER broad 2) http://sbgnbricks.org/static/bricks/protein_kinase_activity-ER-broad_3.png protein kinase activity (ER broad 3) http://sbgnbricks.org/static/bricks/protein_kinase_activity-AF-main.png protein kinase activity (AF main) http://sbgnbricks.org/static/bricks/protein_kinase_activity-PD-narrow_2.png protein kinase activity (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_kinase_activity-PD-narrow_1.png protein kinase activity (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_kinase_activity-PD-narrow_4.png protein kinase activity (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_kinase_activity-PD-narrow_3.png protein kinase activity (PD narrow 3) http://sbgnbricks.org/static/bricks/kinase_activity-AF-main.png kinase activity (AF main) http://sbgnbricks.org/static/bricks/kinase_activity-AF-synonym_1.png kinase activity (AF synonym 1) http://sbgnbricks.org/static/bricks/protein_methyltransferase_activity-ER-broad_1.png protein methyltransferase activity (ER broad 1) http://sbgnbricks.org/static/bricks/protein_methyltransferase_activity-ER-broad_2.png protein methyltransferase activity (ER broad 2) http://sbgnbricks.org/static/bricks/protein_methyltransferase_activity-ER-broad_3.png protein methyltransferase activity (ER broad 3) http://sbgnbricks.org/static/bricks/protein_methyltransferase_activity-AF-main.png protein methyltransferase activity (AF main) http://sbgnbricks.org/static/bricks/protein_methyltransferase_activity-PD-narrow_1.png protein methyltransferase activity (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_methyltransferase_activity-PD-narrow_2.png protein methyltransferase activity (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_methyltransferase_activity-PD-narrow_4.png protein methyltransferase activity (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_methyltransferase_activity-PD-narrow_3.png protein methyltransferase activity (PD narrow 3) http://sbgnbricks.org/static/bricks/methyltransferase_activity-AF-main.png methyltransferase activity (AF main) Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor protein. protein palmitoyltransferase activity http://sbgnbricks.org/static/bricks/protein_palmitoyltransferase_activity-ER-broad_2.png protein palmitoyltransferase activity (ER broad 2) http://sbgnbricks.org/static/bricks/protein_palmitoyltransferase_activity-ER-broad_3.png protein palmitoyltransferase activity (ER broad 3) http://sbgnbricks.org/static/bricks/protein_palmitoyltransferase_activity-ER-broad_1.png protein palmitoyltransferase activity (ER broad 1) http://sbgnbricks.org/static/bricks/protein_palmitoyltransferase_activity-AF-main.png protein palmitoyltransferase activity (AF main) http://sbgnbricks.org/static/bricks/protein_palmitoyltransferase_activity-PD-narrow_1.png protein palmitoyltransferase activity (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_palmitoyltransferase_activity-PD-narrow_2.png protein palmitoyltransferase activity (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_palmitoyltransferase_activity-PD-narrow_4.png protein palmitoyltransferase activity (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_palmitoyltransferase_activity-PD-narrow_3.png protein palmitoyltransferase activity (PD narrow 3) http://sbgnbricks.org/static/bricks/palmitoyltransferase_activity-AF-main.png palmitoyltransferase activity (AF main) Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group to a molecule. transferase activity, transferring prenyl groups http://sbgnbricks.org/static/bricks/protein_prenyltransferase_activity-ER-broad_1.png protein prenyltransferase activity (ER broad 1) http://sbgnbricks.org/static/bricks/protein_prenyltransferase_activity-ER-broad_3.png protein prenyltransferase activity (ER broad 3) http://sbgnbricks.org/static/bricks/protein_prenyltransferase_activity-ER-broad_2.png protein prenyltransferase activity (ER broad 2) http://sbgnbricks.org/static/bricks/protein_prenyltransferase_activity-AF-main.png protein prenyltransferase activity (AF main) http://sbgnbricks.org/static/bricks/protein_prenyltransferase_activity-PD-narrow_2.png protein prenyltransferase activity (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_prenyltransferase_activity-PD-narrow_1.png protein prenyltransferase activity (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_prenyltransferase_activity-PD-narrow_4.png protein prenyltransferase activity (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_prenyltransferase_activity-PD-narrow_3.png protein prenyltransferase activity (PD narrow 3) http://sbgnbricks.org/static/bricks/prenyltransferase_activity-AF-main.png prenyltransferase activity (AF main) protein deubiquitinase activity Catalysis of the hydrolysis of ubiquitin from a protein. protein ubiquitinyl hydrolase activity http://sbgnbricks.org/static/bricks/protein_ubiquitinyl_hydrolase_activity-ER-broad_3.png protein ubiquitinyl hydrolase activity (ER broad 3) http://sbgnbricks.org/static/bricks/protein_ubiquitinyl_hydrolase_activity-ER-broad_1.png protein ubiquitinyl hydrolase activity (ER broad 1) http://sbgnbricks.org/static/bricks/protein_ubiquitinyl_hydrolase_activity-ER-broad_2.png protein ubiquitinyl hydrolase activity (ER broad 2) http://sbgnbricks.org/static/bricks/protein_ubiquitinyl_hydrolase_activity-AF-main.png protein ubiquitinyl hydrolase activity (AF main) http://sbgnbricks.org/static/bricks/protein_ubiquitinyl_hydrolase_activity-PD-narrow_2.png protein ubiquitinyl hydrolase activity (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_ubiquitinyl_hydrolase_activity-PD-narrow_1.png protein ubiquitinyl hydrolase activity (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_ubiquitinyl_hydrolase_activity-PD-narrow_4.png protein ubiquitinyl hydrolase activity (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_ubiquitinyl_hydrolase_activity-PD-narrow_3.png protein ubiquitinyl hydrolase activity (PD narrow 3) http://sbgnbricks.org/static/bricks/protein_ubiquitinyl_hydrolase_activity-AF-synonym_1.png protein ubiquitinyl hydrolase activity (AF synonym 1) http://sbgnbricks.org/static/bricks/ubiquitinyl_hydrolase_activity-AF-main.png ubiquitinyl hydrolase activity (AF main) http://sbgnbricks.org/static/bricks/ubiquitinyl_hydrolase_activity-AF-synonym_1.png ubiquitinyl hydrolase activity (AF synonym 1) http://sbgnbricks.org/static/bricks/ubiquitin-protein_transferase_activity-ER-broad_2.png ubiquitin-protein transferase activity (ER broad 2) http://sbgnbricks.org/static/bricks/ubiquitin-protein_transferase_activity-ER-broad_3.png ubiquitin-protein transferase activity (ER broad 3) http://sbgnbricks.org/static/bricks/ubiquitin-protein_transferase_activity-ER-broad_1.png ubiquitin-protein transferase activity (ER broad 1) http://sbgnbricks.org/static/bricks/ubiquitin-protein_transferase_activity-AF-main.png ubiquitin-protein transferase activity (AF main) http://sbgnbricks.org/static/bricks/ubiquitin-protein_transferase_activity-PD-narrow_1.png ubiquitin-protein transferase activity (PD narrow 1) http://sbgnbricks.org/static/bricks/ubiquitin-protein_transferase_activity-PD-narrow_2.png ubiquitin-protein transferase activity (PD narrow 2) http://sbgnbricks.org/static/bricks/ubiquitin-protein_transferase_activity-PD-narrow_4.png ubiquitin-protein transferase activity (PD narrow 4) http://sbgnbricks.org/static/bricks/ubiquitin-protein_transferase_activity-PD-narrow_3.png ubiquitin-protein transferase activity (PD narrow 3) Covalent reaction that results in the addition of a chemical group on a protein. addition of a chemical group on a protein http://sbgnbricks.org/static/bricks/addition_of_a_chemical_group_on_a_protein-ER-main.png addition of a chemical group on a protein (ER main) http://sbgnbricks.org/static/bricks/addition_of_a_chemical_group_on_a_protein-PD-narrow_1.png addition of a chemical group on a protein (PD narrow 1) http://sbgnbricks.org/static/bricks/addition_of_a_chemical_group_on_a_protein-ER-narrow.png addition of a chemical group on a protein (ER narrow) http://sbgnbricks.org/static/bricks/addition_of_a_chemical_group_on_a_protein-PD-narrow_2.png addition of a chemical group on a protein (PD narrow 2) http://sbgnbricks.org/static/bricks/addition_of_a_chemical_group_on_a_protein-PD-narrow_4.png addition of a chemical group on a protein (PD narrow 4) http://sbgnbricks.org/static/bricks/addition_of_a_chemical_group_on_a_protein-PD-narrow_3.png addition of a chemical group on a protein (PD narrow 3) http://sbgnbricks.org/static/bricks/addition_of_a_chemical_group-ER-main.png addition of a chemical group (ER main) http://sbgnbricks.org/static/bricks/addition_of_a_chemical_group-ER-narrow.png addition of a chemical group (ER narrow) Removal of a methyl group from a chemical entity. demethylation http://sbgnbricks.org/static/bricks/demethylation-ER-main.png demethylation (ER main) http://sbgnbricks.org/static/bricks/prenylation-ER-main.png prenylation (ER main) http://sbgnbricks.org/static/bricks/prenylation-ER-narrow.png prenylation (ER narrow) Inhibition of a biochemical reaction. inhibitory activity http://sbgnbricks.org/static/bricks/inhibitory_activity-PD-narrow_1.png inhibitory activity (PD narrow 1) http://sbgnbricks.org/static/bricks/inhibitory_activity-ER-narrow_1.png inhibitory activity (ER narrow 1) http://sbgnbricks.org/static/bricks/inhibitory_activity-ER-narrow_2.png inhibitory activity (ER narrow 2) http://sbgnbricks.org/static/bricks/inhibitory_activity-ER-narrow_3.png inhibitory activity (ER narrow 3) http://sbgnbricks.org/static/bricks/inhibitory_activity-ER-narrow_4.png inhibitory activity (ER narrow 4) http://sbgnbricks.org/static/bricks/inhibitory_activity-ER-narrow_5.png inhibitory activity (ER narrow 5) http://sbgnbricks.org/static/bricks/inhibitory_activity-ER-narrow_6.png inhibitory activity (ER narrow 6) http://sbgnbricks.org/static/bricks/inhibitory_activity-PD-narrow_3.png inhibitory activity (PD narrow 3) http://sbgnbricks.org/static/bricks/modulatory_activity-PD-narrow_2.png inhibitory activity (PD narrow 2) Removal of a methyl group from a protein. protein demethylation http://sbgnbricks.org/static/bricks/protein_demethylation-ER-main.png protein demethylation (ER main) http://sbgnbricks.org/static/bricks/protein_demethylation-PD-narrow_1.png protein demethylation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_demethylation-PD-narrow_2.png protein demethylation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_demethylation-PD-narrow_3.png protein demethylation (PD narrow 3) http://sbgnbricks.org/static/bricks/protein_dephosphorylation-ER-main.png protein dephosphorylation (ER main) http://sbgnbricks.org/static/bricks/protein_dephosphorylation-PD-narrow_1.png protein dephosphorylation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_dephosphorylation-PD-narrow_2.png protein dephosphorylation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_demethylation-PD-narrow_4.png protein demethylation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_dephosphorylation-PD-narrow_4.png protein dephosphorylation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_dephosphorylation-PD-narrow_3.png protein dephosphorylation (PD narrow 3) Removal of a phosphate group (-H2PO4) from a protein. protein dephosphorylation http://sbgnbricks.org/static/bricks/dephosphorylation-ER-main.png dephosphorylation (ER main) Addition of a prenyl group (generic sense) to a protein. protein prenylation http://sbgnbricks.org/static/bricks/protein_prenylation-ER-main.png protein prenylation (ER main) http://sbgnbricks.org/static/bricks/protein_prenylation-PD-narrow_2.png protein prenylation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_prenylation-ER-narrow.png protein prenylation (ER narrow) http://sbgnbricks.org/static/bricks/protein_prenylation-PD-narrow_1.png protein prenylation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_prenylation-PD-narrow_4.png protein prenylation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_prenylation-PD-narrow_3.png protein prenylation (PD narrow 3) Covalent reaction that results in the addition of a chemical group on a protein. protein acetylation http://sbgnbricks.org/static/bricks/protein_acetylation-ER-main.png protein acetylation (ER main) http://sbgnbricks.org/static/bricks/protein_acetylation-ER-narrow.png protein acetylation (ER narrow) http://sbgnbricks.org/static/bricks/protein_acetylation-PD-narrow_1.png protein acetylation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_acetylation-PD-narrow_2.png protein acetylation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_acetylation-PD-narrow_4.png protein acetylation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_acetylation-PD-narrow_3.png protein acetylation (PD narrow 3) http://sbgnbricks.org/static/bricks/acetylation-ER-main.png acetylation (ER main) http://sbgnbricks.org/static/bricks/acetylation-ER-narrow.png acetylation (ER narrow) http://sbgnbricks.org/static/bricks/glycosylation-ER-main.png glycosylation (ER main) http://sbgnbricks.org/static/bricks/glycosylation-ER-narrow.png glycosylation (ER narrow) Addition of a saccharide group to a protein. protein glycosylation http://sbgnbricks.org/static/bricks/protein_glycosylation-ER-main.png protein glycosylation (ER main) http://sbgnbricks.org/static/bricks/protein_glycosylation-PD-narrow_1.png protein glycosylation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_glycosylation-PD-narrow_2.png protein glycosylation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_glycosylation-ER-narrow.png protein glycosylation (ER narrow) http://sbgnbricks.org/static/bricks/protein_glycosylation-PD-narrow_4.png protein glycosylation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_glycosylation-PD-narrow_3.png protein glycosylation (PD narrow 3) Addition of an hydroxyl group (-OH) to a protein. protein hydroxylation http://sbgnbricks.org/static/bricks/protein_hydroxylation-ER-main.png protein hydroxylation (ER main) http://sbgnbricks.org/static/bricks/protein_hydroxylation-PD-narrow_2.png protein hydroxylation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_hydroxylation-ER-narrow.png protein hydroxylation (ER narrow) http://sbgnbricks.org/static/bricks/protein_hydroxylation-PD-narrow_1.png protein hydroxylation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_hydroxylation-PD-narrow_4.png protein hydroxylation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_hydroxylation-PD-narrow_3.png protein hydroxylation (PD narrow 3) http://sbgnbricks.org/static/bricks/hydroxylation-ER-main.png hydroxylation (ER main) http://sbgnbricks.org/static/bricks/hydroxylation-ER-narrow.png hydroxylation (ER narrow) Addition of a methyl group (-CH3) to a protein. protein methylation http://sbgnbricks.org/static/bricks/protein_methylation-ER-main.png protein methylation (ER main) http://sbgnbricks.org/static/bricks/protein_methylation-PD-narrow_2.png protein methylation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_methylation-ER-narrow.png protein methylation (ER narrow) http://sbgnbricks.org/static/bricks/protein_methylation-PD-narrow_1.png protein methylation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_methylation-PD-narrow_4.png protein methylation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_methylation-PD-narrow_3.png protein methylation (PD narrow 3) http://sbgnbricks.org/static/bricks/methylation-ER-main.png methylation (ER main) http://sbgnbricks.org/static/bricks/methylation-ER-narrow.png methylation (ER narrow) Addition of a myristoyl (CH3-[CH2]12-CO-) to a protein. protein myristoylation http://sbgnbricks.org/static/bricks/protein_myristoylation-ER-main.png protein myristoylation (ER main) http://sbgnbricks.org/static/bricks/protein_myristoylation-PD-narrow_1.png protein myristoylation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_myristoylation-PD-narrow_2.png protein myristoylation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_myristoylation-ER-narrow.png protein myristoylation (ER narrow) http://sbgnbricks.org/static/bricks/protein_myristoylation-PD-narrow_4.png protein myristoylation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_myristoylation-PD-narrow_3.png protein myristoylation (PD narrow 3) http://sbgnbricks.org/static/bricks/myristoylation-ER-main.png myristoylation (ER main) http://sbgnbricks.org/static/bricks/myristoylation-ER-narrow.png myristoylation (ER narrow) Addition of a palmitoyl group (CH3-[CH2]14-CO-) to a protein. protein palmitoylation http://sbgnbricks.org/static/bricks/protein_palmitoylation-ER-main.png protein palmitoylation (ER main) http://sbgnbricks.org/static/bricks/protein_palmitoylation-PD-narrow_1.png protein palmitoylation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_palmitoylation-ER-narrow.png protein palmitoylation (ER narrow) http://sbgnbricks.org/static/bricks/protein_palmitoylation-PD-narrow_2.png protein palmitoylation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_palmitoylation-PD-narrow_4.png protein palmitoylation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_palmitoylation-PD-narrow_3.png protein palmitoylation (PD narrow 3) http://sbgnbricks.org/static/bricks/palmitoylation-ER-main.png palmitoylation (ER main) http://sbgnbricks.org/static/bricks/palmitoylation-ER-narrow.png palmitoylation (ER narrow) Addition of a phosphate group (-H2PO4) to a protein. protein phosphorylation http://sbgnbricks.org/static/bricks/protein_phosphorylation-ER-main.png protein phosphorylation (ER main) http://sbgnbricks.org/static/bricks/protein_phosphorylation-PD-narrow_1.png protein phosphorylation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_phosphorylation-PD-narrow_2.png protein phosphorylation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_phosphorylation-ER-narrow.png protein phosphorylation (ER narrow) http://sbgnbricks.org/static/bricks/protein_phosphorylation-PD-narrow_4.png protein phosphorylation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_phosphorylation-PD-narrow_3.png protein phosphorylation (PD narrow 3) http://sbgnbricks.org/static/bricks/phosphorylation-ER-main.png phosphorylation (ER main) http://sbgnbricks.org/static/bricks/phosphorylation-ER-narrow.png phosphorylation (ER narrow) Addition of a proton (H+) to a protein. protein protonation http://sbgnbricks.org/static/bricks/protein_protonation-ER-main.png protein protonation (ER main) http://sbgnbricks.org/static/bricks/protein_protonation-PD-narrow_2.png protein protonation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_protonation-PD-narrow_1.png protein protonation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_protonation-ER-narrow.png protein protonation (ER narrow) http://sbgnbricks.org/static/bricks/protein_protonation-PD-narrow_4.png protein protonation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_protonation-PD-narrow_3.png protein protonation (PD narrow 3) http://sbgnbricks.org/static/bricks/protonation-ER-main.png protonation (ER main) http://sbgnbricks.org/static/bricks/protonation-ER-narrow.png protonation (ER narrow) Addition of a sulfate group (SO4--) to a protein. protein sulfation http://sbgnbricks.org/static/bricks/protein_sulfation-ER-main.png protein sulfation (ER main) http://sbgnbricks.org/static/bricks/protein_sulfation-PD-narrow_1.png protein sulfation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_sulfation-ER-narrow.png protein sulfation (ER narrow) http://sbgnbricks.org/static/bricks/protein_sulfation-PD-narrow_2.png protein sulfation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_sulfation-PD-narrow_4.png protein sulfation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_sulfation-PD-narrow_3.png protein sulfation (PD narrow 3) http://sbgnbricks.org/static/bricks/sulfation-ER-main.png sulfation (ER main) http://sbgnbricks.org/static/bricks/sulfation-ER-narrow.png sulfation (ER narrow) Covalent linkage of a protein to the protein ubiquitin. protein ubiquitination http://sbgnbricks.org/static/bricks/protein_ubiquitination-ER-main.png protein ubiquitination (ER main) http://sbgnbricks.org/static/bricks/protein_ubiquitination-PD-narrow_1.png protein ubiquitination (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_ubiquitination-PD-narrow_2.png protein ubiquitination (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_ubiquitination-ER-narrow.png protein ubiquitination (ER narrow) http://sbgnbricks.org/static/bricks/protein_ubiquitination-PD-narrow_4.png protein ubiquitination (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_ubiquitination-PD-narrow_3.png protein ubiquitination (PD narrow 3) http://sbgnbricks.org/static/bricks/ubiquitination-ER-main.png ubiquitination (ER main) http://sbgnbricks.org/static/bricks/ubiquitination-ER-narrow.png ubiquitination (ER narrow) http://sbgnbricks.org/static/bricks/degradation-ER-main.png degradation (ER main) http://sbgnbricks.org/static/bricks/degradation-PD-main.png degradation (PD main) http://sbgnbricks.org/static/bricks/transcription-PD-alternate.png transcription (PD alternate) http://sbgnbricks.org/static/bricks/transcription-PD-main.png transcription (PD main) http://sbgnbricks.org/static/bricks/transcription-ER-main.png transcription (ER main) http://sbgnbricks.org/static/bricks/translation-PD-alternate.png translation (PD alternate) http://sbgnbricks.org/static/bricks/translation-ER-main.png translation (ER main) http://sbgnbricks.org/static/bricks/translation-PD-main.png translation (PD main) http://sbgnbricks.org/static/bricks/translocation_reaction-ER-main.png translocation reaction (ER main) http://sbgnbricks.org/static/bricks/translocation_reaction-PD-narrow_1.png translocation reaction (PD narrow 1) http://sbgnbricks.org/static/bricks/translocation_reaction-PD-narrow_2.png translocation reaction (PD narrow 2) http://sbgnbricks.org/static/bricks/deprotonation-ER-main.png deprotonation (ER main) http://sbgnbricks.org/static/bricks/biological_process-AF-main.png biological process (AF main) http://sbgnbricks.org/static/bricks/biological_process-PD-main.png biological process (PD main) http://sbgnbricks.org/static/bricks/biological_process-ER-main.png biological process (ER main) http://sbgnbricks.org/static/bricks/transcellular_membrane_influx_reaction-PD-main.png transcellular membrane influx reaction (PD main) http://sbgnbricks.org/static/bricks/transcellular_membrane_efflux_reaction-PD-main.png transcellular membrane efflux reaction (PD main) http://sbgnbricks.org/static/bricks/reversible_process-PD-main.png reversible process (PD main) http://sbgnbricks.org/static/bricks/passive_transport-PD-narrow_1.png passive transport (PD narrow 1) http://sbgnbricks.org/static/bricks/passive_transport-PD-narrow_2.png passive transport (PD narrow 2) http://sbgnbricks.org/static/bricks/activation-PD-broad_1.png activation (PD broad 1) http://sbgnbricks.org/static/bricks/activation-ER-main.png activation (ER main) http://sbgnbricks.org/static/bricks/activation-PD-narrow_3.png activation (PD narrow 3) http://sbgnbricks.org/static/bricks/activation-PD-narrow_4.png activation (PD narrow 4) http://sbgnbricks.org/static/bricks/activation-PD-narrow_1.png activation (PD narrow 1) http://sbgnbricks.org/static/bricks/activation-PD-narrow_2.png activation (PD narrow 2) http://sbgnbricks.org/static/bricks/active_transport-PD-narrow_1.png active transport (PD narrow 1) http://sbgnbricks.org/static/bricks/active_transport-PD-narrow_2.png active transport (PD narrow 2) http://sbgnbricks.org/static/bricks/symporter-mediated_transport-PD-narrow_1.png symporter-mediated transport (PD narrow 1) http://sbgnbricks.org/static/bricks/symporter-mediated_transport-PD-narrow_2.png symporter-mediated transport (PD narrow 2) http://sbgnbricks.org/static/bricks/antiporter-mediated_transport-PD-main.png antiporter-mediated transport (PD main) Closing of a channel. channel closing http://sbgnbricks.org/static/bricks/channel_closing-PD-main.png channel closing (PD main) http://sbgnbricks.org/static/bricks/channel_closing-ER-main.png channel closing (ER main) Opening of a channel. channel opening http://sbgnbricks.org/static/bricks/channel_opening-PD-main.png channel opening (PD main) http://sbgnbricks.org/static/bricks/channel_opening-ER-main.png channel opening (ER main) Irreversible biochemical reaction whose participants are simple chemicals. irreversible metabolic reaction Biochemical reaction whose participants are simple chemicals. metabolic reaction http://sbgnbricks.org/static/bricks/irreversible_metabolic_reaction-PD-main.png irreversible metabolic reaction (PD main) Reversible biochemical reaction whose participants are simple chemicals. reversible metabolic reaction http://sbgnbricks.org/static/bricks/reversible_metabolic_reaction-PD-main.png reversible metabolic reaction (PD main) Reversible opening/closing of a channel. reversible channel opening/closing http://sbgnbricks.org/static/bricks/reversible_channel_opening__closing-PD-main.png reversible channel opening/closing (PD main) http://sbgnbricks.org/static/bricks/DNA-binding_transcription_activator_activity-PD-main.png DNA-binding transcription activator activity (PD main) http://sbgnbricks.org/static/bricks/DNA-binding_transcription_activator_activity-ER-main.png DNA-binding transcription activator activity (ER main) http://sbgnbricks.org/static/bricks/DNA-binding_transcription_activator_activity-AF-main.png DNA-binding transcription activator activity (AF main) http://sbgnbricks.org/static/bricks/DNA-binding_transcription_factor_activity-AF-main.png DNA-binding transcription factor activity (AF main) http://sbgnbricks.org/static/bricks/DNA-binding_transcription_factor_activity-ER-main.png DNA-binding transcription factor activity (ER main) http://sbgnbricks.org/static/bricks/DNA-binding_transcription_factor_activity-PD-main.png DNA-binding transcription factor activity (PD main) http://sbgnbricks.org/static/bricks/DNA-binding_transcription_factor_activity-AF-synonym_1.png DNA-binding transcription factor activity (AF synonym 1) http://sbgnbricks.org/static/bricks/DNA-binding_transcription_factor_activity-AF-synonym_2.png DNA-binding transcription factor activity (AF synonym 2) http://sbgnbricks.org/static/bricks/DNA-binding_transcription_repressor_activity-AF-main.png DNA-binding transcription repressor activity (AF main) http://sbgnbricks.org/static/bricks/DNA-binding_transcription_repressor_activity-ER-main.png DNA-binding transcription repressor activity (ER main) http://sbgnbricks.org/static/bricks/DNA-binding_transcription_repressor_activity-PD-main.png DNA-binding transcription repressor activity (PD main) http://sbgnbricks.org/static/bricks/RNA-binding_transcription_regulator_activity-AF-main.png RNA-binding transcription regulator activity (AF main) http://sbgnbricks.org/static/bricks/RNA-binding_transcription_regulator_activity-PD-main.png RNA-binding transcription regulator activity (PD main) http://sbgnbricks.org/static/bricks/RNA-binding_transcription_regulator_activity-ER-main.png RNA-binding transcription regulator activity (ER main) http://sbgnbricks.org/static/bricks/RNA-binding_transcription_regulator_activity-AF-synonym_1.png RNA-binding transcription regulator activity (AF synonym 1) One or more processes that are not represented in certain representations or interpretations of a model, at least on of which being irreversible. omitted irreversible process http://sbgnbricks.org/static/bricks/omitted_irreversible_process-PD-main.png omitted irreversible process (PD main) One or more reversible processes that are not represented in certain representations or interpretations of a model. omitted reversible process http://sbgnbricks.org/static/bricks/omitted_reversible_process-PD-main.png omitted reversible process (PD main) http://sbgnbricks.org/static/bricks/palmitoyl_hydrolase_activity-AF-main.png palmitoyl hydrolase activity (AF main) Removal of a proton (hydrogen ion H+) from a protein. protein deprotonation http://sbgnbricks.org/static/bricks/protein_deprotonation-ER-main.png protein deprotonation (ER main) http://sbgnbricks.org/static/bricks/protein_deprotonation-PD-narrow_1.png protein deprotonation (PD narrow 1) http://sbgnbricks.org/static/bricks/protein_deprotonation-PD-narrow_2.png protein deprotonation (PD narrow 2) http://sbgnbricks.org/static/bricks/protein_deprotonation-PD-narrow_4.png protein deprotonation (PD narrow 4) http://sbgnbricks.org/static/bricks/protein_deprotonation-PD-narrow_3.png protein deprotonation (PD narrow 3) http://sbgnbricks.org/static/bricks/palmitoyl-(protein)_hydrolase_activity-ER-broad_1.png palmitoyl-(protein) hydrolase activity (ER broad 1) http://sbgnbricks.org/static/bricks/palmitoyl-(protein)_hydrolase_activity-ER-broad_3.png palmitoyl-(protein) hydrolase activity (ER broad 3) http://sbgnbricks.org/static/bricks/palmitoyl-(protein)_hydrolase_activity-ER-broad_2.png palmitoyl-(protein) hydrolase activity (ER broad 2) http://sbgnbricks.org/static/bricks/palmitoyl-(protein)_hydrolase_activity-AF-main.png palmitoyl-(protein) hydrolase activity (AF main) http://sbgnbricks.org/static/bricks/palmitoyl-(protein)_hydrolase_activity-PD-narrow_1.png palmitoyl-(protein) hydrolase activity (PD narrow 1) http://sbgnbricks.org/static/bricks/palmitoyl-(protein)_hydrolase_activity-PD-narrow_2.png palmitoyl-(protein) hydrolase activity (PD narrow 2) http://sbgnbricks.org/static/bricks/palmitoyl-(protein)_hydrolase_activity-PD-narrow_4.png palmitoyl-(protein) hydrolase activity (PD narrow 4) http://sbgnbricks.org/static/bricks/palmitoyl-(protein)_hydrolase_activity-PD-narrow_3.png palmitoyl-(protein) hydrolase activity (PD narrow 3) Catalytic activity that acts to deactivate a protein. catalytic activity, deactivating a protein http://sbgnbricks.org/static/bricks/catalytic_activity,_deactivating_a_protein-PD-broad_1.png catalytic activity, deactivating a protein (PD broad 1) http://sbgnbricks.org/static/bricks/catalytic_activity,_deactivating_a_protein-PD-narrow_1.png catalytic activity, deactivating a protein (PD narrow 1) http://sbgnbricks.org/static/bricks/catalytic_activity,_deactivating_a_protein-PD-narrow_2.png catalytic activity, deactivating a protein (PD narrow 2) http://sbgnbricks.org/static/bricks/catalytic_activity,_deactivating_a_protein-PD-narrow_4.png catalytic activity, deactivating a protein (PD narrow 4) http://sbgnbricks.org/static/bricks/catalytic_activity,_deactivating_a_protein-PD-narrow_3.png catalytic activity, deactivating a protein (PD narrow 3) combined influence of biological activities on a biological process http://sbgnbricks.org/static/bricks/combined_influence_of_biological_activities_on_a_biological_process-AF-main.png combined influence of biological activities on a biological process (AF main) combined necessary stimulation of biological activities on a biological process combined positive influence of biological activities on a biological process http://sbgnbricks.org/static/bricks/combined_necessary_stimulation_of_biological_activities_on_a_biological_process-AF-main.png combined necessary stimulation of biological activities on a biological process (AF main) http://sbgnbricks.org/static/bricks/combined_positive_influence_of_biological_activities_on_a_biological_process-AF-main.png combined positive influence of biological activities on a biological process (AF main) combined negative influence of biological activities on a biological process http://sbgnbricks.org/static/bricks/combined_negative_influence_of_biological_activities_on_a_biological_process-AF-main.png combined negative influence of biological activities on a biological process (AF main) combined negative influence of biological activities on another biological activity http://sbgnbricks.org/static/bricks/combined_negative_influence_of_biological_activities_on_another_biological_activity-AF-main.png combined negative influence of biological activities on another biological activity (AF main) simple positive influence of a protein kinase activity on another protein kinase activity http://sbgnbricks.org/static/bricks/simple_positive_influence_of_a_protein_kinase_activity_on_another_protein_kinase_activity-AF-main.png simple positive influence of a protein kinase activity on another protein kinase activity (AF main) http://sbgnbricks.org/static/bricks/stimulatory_activity-ER-narrow_7.png stimulatory activity (ER narrow 7) http://sbgnbricks.org/static/bricks/stimulatory_activity-ER-narrow_8.png stimulatory activity (ER narrow 8) http://sbgnbricks.org/static/bricks/stimulatory_activity-ER-narrow_9.png stimulatory activity (ER narrow 9) http://sbgnbricks.org/static/bricks/modulatory_activity-ER-narrow_7.png modulatory activity (ER narrow 7) http://sbgnbricks.org/static/bricks/modulatory_activity-ER-narrow_8.png modulatory activity (ER narrow 8) http://sbgnbricks.org/static/bricks/modulatory_activity-ER-narrow_9.png modulatory activity (ER narrow 9) http://sbgnbricks.org/static/bricks/inhibitory_activity-ER-narrow_7.png inhibitory activity (ER narrow 7) http://sbgnbricks.org/static/bricks/inhibitory_activity-ER-narrow_8.png inhibitory activity (ER narrow 8) http://sbgnbricks.org/static/bricks/inhibitory_activity-ER-narrow_9.png inhibitory activity (ER narrow 9) combined necessary stimulation of binding activities on a protein kinase activity http://sbgnbricks.org/static/bricks/combined_necessary_stimulation_of_binding_activities_on_a_protein_kinase_activity-AF-main.png combined necessary stimulation of binding activities on a protein kinase activity (AF main) simple positive influence of a biological activity on a binding activity http://sbgnbricks.org/static/bricks/simple_positive_influence_of_a_biological_activity_on_a_binding_activity-AF-main.png simple positive influence of a biological activity on a binding activity (AF main) The bricks that represent generic activities. https://identifiers.org/quickgo/GO:0003674 generic activities The bricks that represent the addition or removal of a hydroxyl goup, and the catalysis of these processes. https://identifiers.org/quickgo/GO:0018126 hydroxylation and dehydroxylation The bricks that represent the addition or removal of a chemical goup on molecules and in particular proteins, and the catalysis of these processes. https://identifiers.org/quickgo/GO:0036211 conversion The bricks that represent the formation or dissociation of complexes, that are formed of several subunits linked non-covalently together. complex association and dissociation generic influences The bricks representing transcription. https://identifiers.org/quickgo/GO:0097659 transcription The bricks that represent the addition or removal of a phosphoryl goup, and the catalysis of these processes. https://identifiers.org/quickgo/GO:0006468 https://identifiers.org/quickgo/GO:0006470 https://identifiers.org/quickgo/GO:0016310 https://identifiers.org/quickgo/GO:0016311 phosphorylation and dephosphorylation The bricks representing transport processes, where a biochemical entity mediates the translocation of another biochemical entity from one compartment to another. transport The bricks that represent the addition or removal of a acetyl goup, and the catalysis of these processes. https://identifiers.org/quickgo/GO:0006473 https://identifiers.org/quickgo/GO:0006476 acetylation and deacetylation The bricks that represent the addition or removal of a glycosyl goup, and the catalysis of these processes. https://identifiers.org/quickgo/GO:0006486 https://identifiers.org/quickgo/GO:0006517 https://identifiers.org/quickgo/GO:0070085 glycosylation and deglycosylation The bricks that represent the addition or removal of a myristoyl goup, and the catalysis of these processes. https://identifiers.org/quickgo/GO:0018377 myristoylation and demyristoylation The bricks that represent the addition or removal of a palmitoyl goup, and the catalysis of these processes. https://identifiers.org/quickgo/GO:0002084 https://identifiers.org/quickgo/GO:0018345 palmitoylation and depalmitoylation The bricks that represent the addition or removal of a prenyl goup, and the catalysis of these processes. https://identifiers.org/quickgo/GO:0018342 https://identifiers.org/quickgo/GO:0097354 prenylation and deprenylation The bricks that represent the addition or removal of a sulfate goup, and the catalysis of these processes. https://identifiers.org/quickgo/GO:0006477 https://identifiers.org/quickgo/GO:0051923 sulfation and desulfation The bricks that represent the addition or removal of a ubiquitinyl goup, and the catalysis of these processes. https://identifiers.org/quickgo/GO:0016567 https://identifiers.org/quickgo/GO:0016579 ubiquitination and deubiquitination The bricks that represent generic irreversible processes. generic irreversible processes The bricks that represent the activation and deactivation of a protein by a change in its conformation. activation and deactivation The bricks that represent biochemical reactions whose reactants and products are small molecules. metabolic reaction The bricks that represent generic reversible processes. generic reversible processes The bricks that represent the addition or removal of a methyl goup, and the catalysis of these processes. https://identifiers.org/quickgo/GO:0006479 https://identifiers.org/quickgo/GO:0006482 https://identifiers.org/quickgo/GO:0032259 https://identifiers.org/quickgo/GO:0070988 methylation and demethylation The bricks that represent the addition or removal of protons, and the catalysis of these processes. protonation and deprotonation The bricks representing translation. https://identifiers.org/quickgo/GO:0006412 translation The bricks representing translocation processes, where a biochemical entity is moved from one compartement to another. translocation The bricks that represent large biological processes. https://identifiers.org/quickgo/GO:0008150 generic biological processes The bricks representing active transport processes, where a biochemical entity mediates the translocation of another biochemical entity from one compartment to another, without consumption of energy. passive transport The bricks representing active transport processes, where a biochemical entity mediates the translocation of another biochemical entity from one compartment to another, with consumption of energy. active transport The bricks that represent the opening and closing of a transmenbrane channel. https://identifiers.org/quickgo/GO:0055085 channel opening and closing The bricks that represent generic processes and activities, that are involved in all kinds of biological processes (metabolism, signaling, gene expression). generic The bricks that represent biochemical processes and activities that are involved in signaling pathways, mainly protein post-translational modifications and their catalysis. https://identifiers.org/quickgo/GO:0023052 signalling The bricks representing biochemical processes and activities related to gene expression, such as transcription and translation processes. https://identifiers.org/quickgo/GO:0010467 gene expression The bricks representing translocation and transport processes. https://identifiers.org/quickgo/GO:0006810 translocation and transport The bricks that represent biochemical processes and activities involved in metabolism. Note that those concerning gene expression are in a separate category. https://identifiers.org/quickgo/GO:0008152 metabolism 0 https://sbgn.org/languages/pd/1/2.0/ PD L1V2.0 2 https://sbgn.org/languages/er/1/2.0/ ER L1V2.0 1 https://sbgn.org/languages/af/1/1.2/ AF L1V1.2 13:07:2018 10:45 SBGN Bricks Ontology Generated: 20:06:2019 07:00 13:07:2018 10:45