An ontology of phenotypic qualities (properties, attributes or characteristics). PATO - the Phenotype And Trait Ontology quality 1.2 2025-05-14 definition term replaced by x is the opposite of y if there exists some distance metric M, and there exists no z such as M(x,z) <= M(x,y) or M(y,z) <= M(y,x). RO:0002604 quality is_opposite_of true true is_opposite_of is opposite of is_opposite_of Abnormal/normal slim Absent/present slim Attribute slim cell_quality Disposition slim Human phenotype slim Pathology slim Relational slim: types of quality that require an additional entity in order to exist Scalar slim Value slim subset_property consider created by creation date has_alternative_id has_broad_synonym database_cross_reference has_exact_synonym has_narrow_synonym has_obo_format_version has_obo_namespace has_related_synonym id in_subset shorthand a core relation that holds between a part and its whole BFO:0000050 quality part_of part_of part of part_of a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020. quality of a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020. role of a relation between a 2D immaterial entity (the boundary) and a material entity, in which the boundary delimits the material entity 2D boundary of has synaptic terminal of A relationship between a process and a barrier, where the process occurs in a region spanning the barrier. For cellular processes the barrier is typically a membrane. Examples include transport across a membrane and membrane depolarization. 2017-07-20T17:19:37Z occurs across Primitive instance level timing relation between events before or simultaneous with X ends_after Y iff: end(Y) before_or_simultaneous_with end(X) ends after X immediately_precedes_Y iff: end(X) simultaneous_with start(Y) immediately precedes Relation between a neuron and some structure its axon forms (chemical) synapses in. axon synapses in Relation between a neuron and some structure (e.g.- a brain region) in which it receives (chemical) synaptic input. has postsynaptic terminal in Relation between a neuron and some structure (e.g.- a brain region) in which it receives (chemical) synaptic input. has presynaptic terminal in A general relation between a neuron and some structure in which it either chemically synapses to some target or in which it receives (chemical) synaptic input. has synaptic terminal in A is spatially_disjoint_from B if and only if they have no parts in common spatially disjoint from Relation between an arterial structure and another structure, where the arterial structure acts as a conduit channeling fluid, substance or energy. supplies Relation between an collecting structure and another structure, where the collecting structure acts as a conduit channeling fluid, substance or energy away from the other structure. drains w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type. has component x develops from y if and only if either (a) x directly develops from y or (b) there exists some z such that x directly develops from z and z develops from y This is the transitive form of the develops from relation develops from inverse of directly develops from directly develops into A relation that holds between two occurrents. This is a grouping relation that collects together all the Allen relations. temporally related to x develops from part of y if and only if there exists some z such that x develops from z and z is part of y develops from part of x develops_in y if x is located in y whilst x is developing develops in p has input c iff: p is a process, c is a material entity, c is a participant in p, c is present at the start of p, and the state of c is modified during p. has input p has output c iff c is a participant in p, c is present at the end of p, and c is not present in the same state at the beginning of p. has output inverse of connecting branch of has connecting branch inverse of has developmental contribution from developmentally contributes to Inverse of developmentally induced by developmentally induces Candidate definition: x developmentally related to y if and only if there exists some developmental process (GO:0032502) p such that x and y both participates in p, and x is the output of p and y is the input of p This relation groups together various other developmental relations. It is fairly generic, encompassing induction, developmental contribution and direct and transitive develops from developmentally preceded by Inverse of developmentally preceded by developmentally succeeded by part of developmental precursor of p is causally upstream of, positive effect q iff p is casually upstream of q, and the execution of p is required for the execution of q. holds between x and y if and only if x is causally upstream of y and the progression of x increases the frequency, rate or extent of y causally upstream of, positive effect p is causally upstream of, negative effect q iff p is casually upstream of q, and the execution of p decreases the execution of q. causally upstream of, negative effect q characteristic of part of w if and only if there exists some p such that q inheres in p and p part of w. characteristic of part of A relationship that holds via some environmental process evolutionarily related to A mereological relationship or a topological relationship mereotopologically related to A relationship that holds between entities participating in some developmental process (GO:0032502) developmentally related to this relation holds between c and p when c is part of some c', and c' is capable of p. part of structure that is capable of inverse of regulates regulated by inverse of negatively regulates negatively regulated by inverse of positively regulates positively regulated by A relationship that holds via some process of localization related via localization to is member of is a mereological relation between a item and a collection. member of inverse of has input input of formed as result of We need to import uberon muscle to create a stricter domain constraint A relationship that holds between two material entities in a system of connected structures, where the branching relationship holds based on properties of the connecting network. in branching relationship with x spatially_coextensive_with y if and inly if x and y have the same location spatially coextensive with x has developmental potential involving y iff x is capable of a developmental process with output y. y may be the successor of x, or may be a different structure in the vicinity (as for example in the case of developmental induction). has developmental potential involving x has potential to developmentally induce y iff x developmentally induces y or x is capable of developmentally inducing y has potential to developmentally induce x has potential to directly develop into y iff x directly develops into y or x is capable of directly developing into y has potential to directly develop into inverse of upstream of causally downstream of relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause. causally related to relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause. https://en.wikipedia.org/wiki/Causality p is causally upstream of q iff p is causally related to q, the end of p precedes the end of q, and p is not an occurrent part of q. causally upstream of p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q. affects causally upstream of or within inverse of causally upstream of or within causally downstream of or within p has part that occurs in c if and only if there exists some p1, such that p has_part p1, and p1 occurs in c. has part that occurs in receives input from sends output to relation between physical entity and a process or stage x existence overlaps y if and only if either (a) the start of x is part of y or (b) the end of x is part of y. Formally: x existence starts and ends during y iff (α(x) >= α(y) & α(x) <= ω(y)) OR (ω(x) <= ω(y) & ω(x) >= α(y)) The relations here were created based on work originally by Fabian Neuhaus and David Osumi-Sutherland. The work has not yet been vetted and errors in definitions may have occurred during transcription. existence overlaps A relationship between a material entity and a process where the material entity has some causal role that influences the process causal agent in process p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one where the execution of p influences the execution of q. p may be upstream, downstream, part of, or a container of q. causal relation between processes depends on A relation that holds between elements of a musculoskeletal system or its analogs. biomechanically related to inverse of branching part of has branching part x lumen_of y iff x is the space or substance that is part of y and does not cross any of the inner membranes or boundaries of y that is maximal with respect to the volume of the convex hull. lumen of s 'has part structure that is capable of' p if and only if there exists some part x such that s 'has part' x and x 'capable of' p has part structure that is capable of p results in breakdown of c if and only if the execution of p leads to c no longer being present at the end of p results in breakdown of A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity. causal relation between material entity and a process Holds between c and p if and only if c is capable of some activity a, and a regulates p. capable of regulating Holds between c and p if and only if c is capable of some activity a, and a negatively regulates p. capable of negatively regulating Holds between c and p if and only if c is capable of some activity a, and a positively regulates p. capable of positively regulating A relationship between a realizable entity R (e.g. function or disposition) and a material entity M where R is realized in response to a process that has an input stimulus of M. 2017-12-26T19:45:49Z realized in response to stimulus 2018-03-13T23:55:05Z causally upstream of or within, negative effect 2018-03-13T23:55:19Z causally upstream of or within, positive effect r 'realized in response to' s iff, r is a realizable (e.g. a plant trait such as responsivity to drought), s is an environmental stimulus (a process), and s directly causes the realization of r. triggered by process realized in response to triggered by process q1 different_in_magnitude_relative_to q2 if and only if magnitude(q1) NOT =~ magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. different in magnitude relative to q1 different_in_magnitude_relative_to q2 if and only if magnitude(q1) NOT =~ magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. https://orcid.org/0000-0002-6601-2165 q1 similar_in_magnitude_relative_to q2 if and only if magnitude(q1) =~ magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. similar in magnitude relative to q1 similar_in_magnitude_relative_to q2 if and only if magnitude(q1) =~ magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. https://orcid.org/0000-0002-6601-2165 X device utilizes material Y means X and Y are material entities, and X is capable of some process P that has input Y. 2021-11-08T12:00:00Z utilizes device utilizes material p has anatomical participant c iff p has participant c, and c is an anatomical entity 2018-09-26T01:08:58Z results in changes to anatomical or cellular structure quality correlates_with Consider using RO:0002610 instead. See https://github.com/pato-ontology/pato/issues/454 obsolete correlates_with true OBSOLETE. q1 decreased_in_magnitude_relative_to q2 if and only if magnitude(q1) < magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. quality decreased_in_magnitude_relative_to Refer to https://github.com/pato-ontology/pato/issues/454 for obsoletion reason. This relation is used to determine the 'directionality' of relative qualities such as 'decreased strength', relative to the parent type, 'strength'. obsolete decreased_in_magnitude_relative_to true OBSOLETE. q1 decreased_in_magnitude_relative_to q2 if and only if magnitude(q1) < magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. PATOC:CJM OBSOLETE. q1 different_in_magnitude_relative_to q2 if and only if magnitude(q1) NOT =~ magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. quality different_in_magnitude_relative_to Refer to https://github.com/pato-ontology/pato/issues/454 for obsoletion reason. obsolete different_in_magnitude_relative_to true OBSOLETE. q1 different_in_magnitude_relative_to q2 if and only if magnitude(q1) NOT =~ magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. PATOC:CJM OBSOLETE. q1 directly_associated_with q2 iff q1 is dependent on q2, and the magnitude of q1 increases if the magnitude of q2 is increased, or the magnitude of q1 decreases if the magnitude of q2 is decreased. The relationship is not necessarily linear. cjm 2009-08-26T02:50:08Z quality directly_associated_with refer to https://github.com/pato-ontology/pato/issues/454 for obsoletion reason. OBSOLETE. Example: 'Lewy bodies increased number related to dystrophic neurite increased number' (from annotation of PMID:8740227 in http://ccdb.ucsd.edu/1.0/NDPO.owl#ndpo_404). Here the increase in the number of lewy bodies is directly_associated_with the increase in the number of dystrophic neurites. Association is weaker than correlation or proportionality. These relations may be later added to PATO. obsolete directly_associated_with true OBSOLETE. q1 directly_associated_with q2 iff q1 is dependent on q2, and the magnitude of q1 increases if the magnitude of q2 is increased, or the magnitude of q1 decreases if the magnitude of q2 is decreased. The relationship is not necessarily linear. PATOC:cjm Wikipedia:Association_(statistics) OBSOLETE. s3 has_cross_section s3 if and only if : there exists some 2d plane that intersects the bearer of s3, and the impression of s3 upon that plane has shape quality s2. quality has_cross_section Refer to https://github.com/pato-ontology/pato/issues/454. Example: a spherical object has the quality of being spherical, and the spherical quality has_cross_section round. obsolete has_cross_section true OBSOLETE. s3 has_cross_section s3 if and only if : there exists some 2d plane that intersects the bearer of s3, and the impression of s3 upon that plane has shape quality s2. PATOC:CJM quality has_dividend_entity refer to https://github.com/pato-ontology/pato/issues/454 for obsoletion reason. obsolete has_dividend_entity true quality has_dividend_quality refer to https://github.com/pato-ontology/pato/issues/454 for obsoletion reason. obsolete has_dividend_quality true quality has_divisor_entity refer to https://github.com/pato-ontology/pato/issues/454 for obsoletion reason. obsolete has_divisor_entity true quality has_divisor_quality refer to https://github.com/pato-ontology/pato/issues/454 for obsoletion reason. obsolete has_divisor_quality true quality has_ratio_quality refer to https://github.com/pato-ontology/pato/issues/454 for obsoletion reason. obsolete has_ratio_quality true quality has_relative_magnitude Refer to https://github.com/pato-ontology/pato/issues/454. obsolete has_relative_magnitude true OBSOLETE. q1 increased_in_magnitude_relative_to q2 if and only if magnitude(q1) > magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. quality increased_in_magnitude_relative_to Refer to https://github.com/pato-ontology/pato/issues/454. This relation is used to determine the 'directionality' of relative qualities such as 'increased strength', relative to the parent type, 'strength'. obsolete increased_in_magnitude_relative_to true OBSOLETE. q1 increased_in_magnitude_relative_to q2 if and only if magnitude(q1) > magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. PATOC:CJM OBSOLETE. q1 inversely_associated_with q2 iff q1 is dependent on q2, and the magnitude of q1 decreases if the magnitude of q2 is increased, or the magnitude of q1 increases if the magnitude of q2 is decreased. The relationship is not necessarily linear. cjm 2009-08-26T02:50:24Z quality inversely_associated_with refer to https://github.com/pato-ontology/pato/issues/454 for obsoletion reason. obsolete inversely_associated_with true OBSOLETE. q1 inversely_associated_with q2 iff q1 is dependent on q2, and the magnitude of q1 decreases if the magnitude of q2 is increased, or the magnitude of q1 increases if the magnitude of q2 is decreased. The relationship is not necessarily linear. PATOC:cjm Wikipedia:Association_(statistics) pato.ontology is_magnitude_of refer to https://github.com/pato-ontology/pato/issues/454 for obsoletion reason. obsolete is_magnitude_of true pato.ontology is_measurement_of refer to https://github.com/pato-ontology/pato/issues/454 for obsoletion reason. obsolete is_measurement_of true pato.ontology is_unit_of refer to https://github.com/pato-ontology/pato/issues/454 for obsoletion reason. obsolete is_unit_of true quality realized_by Consider using RO:0009501 instead. See https://github.com/pato-ontology/pato/issues/454 obsolete realized_by true OBSOLETE. q1 reciprocal_of q2 if and only if : q1 and q2 are relational qualities and a phenotype e q1 e2 mutually implies a phenotype e2 q2 e. quality reciprocal_of Refer to https://github.com/pato-ontology/pato/issues/454. There are frequently two ways to state the same thing: we can say 'spermatocyte lacks asters' or 'asters absent from spermatocyte'. In this case the quality is 'lacking all parts of type' - it is a (relational) quality of the spermatocyte, and it is with respect to instances of 'aster'. One of the popular requirements of PATO is that it continue to support 'absent', so we need to relate statements which use this quality to the 'lacking all parts of type' quality. obsolete reciprocal_of true OBSOLETE. q1 reciprocal_of q2 if and only if : q1 and q2 are relational qualities and a phenotype e q1 e2 mutually implies a phenotype e2 q2 e. PATOC:CJM OBSOLETE. q1 similar_in_magnitude_relative_to q2 if and only if magnitude(q1) =~ magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. quality similar_in_magnitude_relative_to Refer to https://github.com/pato-ontology/pato/issues/454 for obsoletion reason. obsolete similar_in_magnitude_relative_to true OBSOLETE. q1 similar_in_magnitude_relative_to q2 if and only if magnitude(q1) =~ magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. PATOC:CJM monadic_form_of quality singly_occurring_form_of refer to https://github.com/pato-ontology/pato/issues/454 for obsoletion reason. OBSOLETE. PATO divides qualities between normal (monadic, singly-occurring) qualities and relational qualities. Relational qualities stand in the 'towards' relation with respect to some additional entity. For example, The sensitivity of an eye towards red light. In some cases we want to represent a quality such as 'protruding' in both monadic and relational branches. We use this relation to link them. obsolete singly_occurring_form_of true quality towards Consider using RO:0002503 instead. See https://github.com/pato-ontology/pato/issues/454 obsolete towards true x distally_connected_to y iff the distal part of x is connected to y. i.e. x connected_to y and x proximal_to y. uberon distally_connected_to distally connected to x distally_connected_to y iff the distal part of x is connected to y. i.e. x connected_to y and x proximal_to y. http://purl.obolibrary.org/obo/uberon/docs/Connectivity-Design-Pattern uberon transitively_anteriorly_connected_to transitively anteriorly connected to uberon transitively_distally_connected_to transitively distally connected to uberon transitively_proximally_connected_to transitively proximally connected to BFO:0000002 BFO:0000003 BFO:0000004 BFO:0000006 BFO:0000015 BFO:0000017 BFO:0000019 BFO:0000020 BFO:0000023 BFO:0000027 BFO:0000040 BFO:0000141 CARO:0000000 Elementary particle not affected by the strong force having a spin 1/2, a negative elementary charge and a rest mass of 0.000548579903(13) u, or 0.51099906(15) MeV. KEGG:C05359 Wikipedia:Electron electron chebi_ontology Elektron beta beta(-) beta-particle e e(-) e- negatron CHEBI:10545 electron CHEBI:10545 electron ChEBI electron KEGG_COMPOUND Elektron ChEBI beta IUPAC beta(-) ChEBI beta-particle IUPAC e IUPAC e(-) UniProt e- KEGG_COMPOUND negatron IUPAC A carbohydrate acid derivative anion obtained by deprotonation of the carboxy groups of hyaluronic acid; major species at pH 7.3. chebi_ontology hyaluronan hyaluronate polyanion CHEBI:132153 hyaluronate CHEBI:132153 hyaluronan UniProt hyaluronate polyanion ChEBI A Bronsted acid derived from one or more inorganic compounds. Inorganic acids (also known as mineral acids) form hydrons and conjugate base ions when dissolved in water. Wikipedia:Mineral_acid chebi_ontology inorganic acids mineral acid mineral acids CHEBI:138103 inorganic acid CHEBI:138103 inorganic acids ChEBI mineral acid ChEBI mineral acids ChEBI Any main group molecular entity that is gaseous at standard temperature and pressure (STP; 0degreeC and 100 kPa). Wikipedia:https://en.wikipedia.org/wiki/Gas chebi_ontology gas molecular entities gaseous molecular entities gaseous molecular entity CHEBI:138675 gas molecular entity CHEBI:138675 gas molecular entities ChEBI gaseous molecular entities ChEBI gaseous molecular entity ChEBI carbamate chebi_ontology Carbamat Karbamat carbamate ion carbamic acid, ion(1-) CHEBI:13941 carbamate CHEBI:13941 carbamate UniProt Carbamat ChEBI Karbamat ChEBI carbamate ion ChemIDplus carbamic acid, ion(1-) ChemIDplus A molecular entity that can accept an electron, a pair of electrons, an atom or a group from another molecular entity. CHEBI:13699 CHEBI:2377 KEGG:C00028 KEGG:C16722 Acceptor chebi_ontology A Akzeptor Hydrogen-acceptor Oxidized donor accepteur CHEBI:15339 acceptor CHEBI:15339 Acceptor KEGG_COMPOUND A KEGG_COMPOUND Akzeptor ChEBI Hydrogen-acceptor KEGG_COMPOUND Oxidized donor KEGG_COMPOUND accepteur ChEBI Actylcholine is an ester of acetic acid and choline, which acts as a neurotransmitter. CHEBI:12686 CHEBI:13715 CHEBI:22197 CHEBI:2416 CHEBI:40559 DrugBank:DB03128 KEGG:C01996 LINCS:LSM-5888 PDBeChem:ACH Wikipedia:Acetylcholine ACETYLCHOLINE Acetylcholine acetylcholine chebi_ontology ACh Azetylcholin O-Acetylcholine choline acetate CHEBI:15355 acetylcholine CHEBI:15355 ACETYLCHOLINE PDBeChem Acetylcholine KEGG_COMPOUND acetylcholine UniProt ACh ChemIDplus Azetylcholin ChEBI O-Acetylcholine KEGG_COMPOUND choline acetate ChemIDplus A simple monocarboxylic acid containing two carbons. CHEBI:22169 CHEBI:2387 CHEBI:40486 HMDB:HMDB0000042 KEGG:C00033 KEGG:D00010 KNApSAcK:C00001176 MetaCyc:ACET PDBeChem:ACT PDBeChem:ACY PPDB:1333 Wikipedia:Acetic_acid ACETIC ACID Acetic acid chebi_ontology AcOH CH3-COOH CH3CO2H E 260 E-260 E260 Essigsaeure Ethanoic acid Ethylic acid HOAc INS No. 260 MeCO2H MeCOOH Methanecarboxylic acid acide acetique ethoic acid CHEBI:15366 acetic acid CHEBI:15366 ACETIC ACID PDBeChem Acetic acid KEGG_COMPOUND AcOH ChEBI CH3-COOH IUPAC CH3CO2H ChEBI E 260 ChEBI E-260 ChEBI E260 ChEBI Essigsaeure ChEBI Ethanoic acid KEGG_COMPOUND Ethylic acid ChemIDplus HOAc ChEBI INS No. 260 ChEBI MeCO2H ChEBI MeCOOH ChEBI Methanecarboxylic acid ChemIDplus acide acetique ChemIDplus ethoic acid ChEBI CHEBI:10745 CHEBI:13416 CHEBI:23833 CHEBI:25366 CHEBI:30491 CHEBI:44742 CHEBI:7860 HMDB:HMDB0001377 KEGG:C00007 KEGG:D00003 MetaCyc:OXYGEN-MOLECULE MolBase:750 PDBeChem:OXY Wikipedia:Oxygen chebi_ontology Disauerstoff E 948 E-948 E948 O2 OXYGEN MOLECULE Oxygen [OO] dioxygene molecular oxygen CHEBI:15379 dioxygen CHEBI:15379 Disauerstoff ChEBI E 948 ChEBI E-948 ChEBI E948 ChEBI O2 IUPAC O2 KEGG_COMPOUND O2 UniProt OXYGEN MOLECULE PDBeChem Oxygen KEGG_COMPOUND [OO] MolBase dioxygene ChEBI molecular oxygen ChEBI A peptide containing ten or more amino acid residues. CHEBI:14860 CHEBI:8314 KEGG:C00403 Polypeptide chebi_ontology Polypeptid polipeptido CHEBI:15841 polypeptide CHEBI:15841 Polypeptide KEGG_COMPOUND Polypeptid ChEBI polipeptido ChEBI A nucleobase-containing molecular entity with a polymeric structure comprised of a linear sequence of 13 or more nucleotide residues. CHEBI:13672 CHEBI:14859 CHEBI:8312 KEGG:C00419 Polynucleotide chebi_ontology polynucleotides CHEBI:15986 polynucleotide CHEBI:15986 Polynucleotide KEGG_COMPOUND polynucleotides ChEBI An azane that consists of a single nitrogen atom covelently bonded to three hydrogen atoms. CHEBI:13405 CHEBI:13406 CHEBI:13407 CHEBI:13771 CHEBI:22533 CHEBI:44269 CHEBI:44284 CHEBI:44404 CHEBI:7434 HMDB:HMDB0000051 KEGG:C00014 KEGG:D02916 KNApSAcK:C00007267 MetaCyc:AMMONIA MolBase:930 PDBeChem:NH3 Wikipedia:Ammonia AMMONIA Ammonia chebi_ontology Ammoniak NH3 R-717 [NH3] ammoniac amoniaco spirit of hartshorn CHEBI:16134 ammonia CHEBI:16134 AMMONIA PDBeChem Ammonia KEGG_COMPOUND Ammoniak ChemIDplus NH3 IUPAC NH3 KEGG_COMPOUND R-717 ChEBI [NH3] MolBase ammoniac ChEBI amoniaco ChEBI spirit of hartshorn ChemIDplus A sulfur oxoanion obtained by deprotonation of both OH groups of sulfuric acid. CHEBI:15135 CHEBI:45687 CHEBI:9335 HMDB:HMDB0001448 KEGG:C00059 KEGG:D05963 MetaCyc:SULFATE PDBeChem:SO4 Wikipedia:Sulfate Sulfate sulfate chebi_ontology SO4(2-) SULFATE ION Sulfate anion(2-) Sulfate dianion Sulfate(2-) Sulfuric acid ion(2-) [SO4](2-) sulphate sulphate ion CHEBI:16189 sulfate CHEBI:16189 Sulfate KEGG_COMPOUND sulfate UniProt SO4(2-) IUPAC SULFATE ION PDBeChem Sulfate anion(2-) HMDB Sulfate dianion HMDB Sulfate(2-) HMDB Sulfuric acid ion(2-) HMDB [SO4](2-) IUPAC sulphate ChEBI sulphate ion ChEBI A mucopolysaccharide composed of N-acetylglucosamine and glucuronic acid subunits. It is found in the connective tissues of vertebrates. A principal constituent of the extracellular matrix (ECM), it mediates the growth and metastasis of tumour cells. CHEBI:14412 CHEBI:24622 CHEBI:24623 CHEBI:5772 HMDB:HMDB0010366 KEGG:C00518 KEGG:D08043 KEGG:G10505 Wikipedia:Hyaluronan Hyaluronic acid chebi_ontology Hyaluronsaeure [beta-D-glucopyranuronosyl-(1->3)-2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl-(1->4)]n [beta-N-Acetyl-D-glucosaminyl(1,4)beta-D-glucuronosyl(1,3)]n acide hyaluronique acido hialuronico hyaluronan CHEBI:16336 hyaluronic acid CHEBI:16336 Hyaluronic acid KEGG_COMPOUND Hyaluronsaeure ChEBI [beta-D-glucopyranuronosyl-(1->3)-2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl-(1->4)]n ChEBI [beta-N-Acetyl-D-glucosaminyl(1,4)beta-D-glucuronosyl(1,3)]n KEGG_COMPOUND acide hyaluronique ChEBI acido hialuronico ChEBI hyaluronan ChEBI A naturally occurring polypeptide synthesized at the ribosome. CHEBI:8526 KEGG:C00017 chebi_ontology Protein a protein polypeptide chain protein polypeptide chains CHEBI:16541 protein polypeptide chain CHEBI:16541 Protein KEGG_COMPOUND a protein UniProt polypeptide chain ChEBI protein polypeptide chains ChEBI Any member of the class of organooxygen compounds that is a polyhydroxy-aldehyde or -ketone or a lactol resulting from their intramolecular condensation (monosaccharides); substances derived from these by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom; and polymeric products arising by intermolecular acetal formation between two or more such molecules (disaccharides, polysaccharides and oligosaccharides). Carbohydrates contain only carbon, hydrogen and oxygen atoms; prior to any oxidation or reduction, most have the empirical formula Cm(H2O)n. Compounds obtained from carbohydrates by substitution, etc., are known as carbohydrate derivatives and may contain other elements. Cyclitols are generally not regarded as carbohydrates. CHEBI:15131 CHEBI:23008 CHEBI:9318 Wikipedia:Carbohydrate chebi_ontology Kohlenhydrat Kohlenhydrate a carbohydrate carbohidrato carbohidratos glucide glucides glucido glucidos hydrates de carbone saccharide saccharides saccharidum CHEBI:16646 carbohydrate CHEBI:16646 Kohlenhydrat ChEBI Kohlenhydrate ChEBI a carbohydrate UniProt carbohidrato IUPAC carbohidratos IUPAC glucide ChEBI glucides ChEBI glucido ChEBI glucidos ChEBI hydrates de carbone ChEBI saccharide IUPAC saccharides IUPAC saccharidum ChEBI Amide derived from two or more amino carboxylic acid molecules (the same or different) by formation of a covalent bond from the carbonyl carbon of one to the nitrogen atom of another with formal loss of water. The term is usually applied to structures formed from alpha-amino acids, but it includes those derived from any amino carboxylic acid. X = OH, OR, NH2, NHR, etc. CHEBI:14753 CHEBI:25906 CHEBI:7990 KEGG:C00012 Peptide chebi_ontology Peptid peptido peptidos CHEBI:16670 peptide CHEBI:16670 Peptide KEGG_COMPOUND Peptid ChEBI peptido ChEBI peptidos ChEBI chebi_ontology noradrenaline CHEBI:166902 noradrenaline(1+) CHEBI:166902 noradrenaline UniProt Any oligosaccharide, polysaccharide or their derivatives consisting of monosaccharides or monosaccharide derivatives linked by glycosidic bonds. See also http://www.ontobee.org/ontology/GNO?iri=http://purl.obolibrary.org/obo/GNO_00000001. chebi_ontology glycans CHEBI:167559 glycan CHEBI:167559 glycans ChEBI An aminoalkylindole consisting of indole having a 2-aminoethyl group at the 3-position. CHEBI:15274 CHEBI:27161 CHEBI:46157 CHEBI:9767 DrugBank:DB08653 HMDB:HMDB0000303 KEGG:C00398 KNApSAcK:C00001434 MetaCyc:TRYPTAMINE PDBeChem:TSS Wikipedia:Tryptamine Tryptamine chebi_ontology 1H-indole-3-ethanamine 2-(1H-INDOL-3-YL)ETHANAMINE 2-(3-indolyl)ethylamine 3-(2-Aminoethyl)indole CHEBI:16765 tryptamine CHEBI:16765 Tryptamine KEGG_COMPOUND 1H-indole-3-ethanamine NIST_Chemistry_WebBook 2-(1H-INDOL-3-YL)ETHANAMINE PDBeChem 2-(3-indolyl)ethylamine ChemIDplus 3-(2-Aminoethyl)indole KEGG_COMPOUND A compound in which a carbohydrate component is covalently bound to a protein component. CHEBI:14349 CHEBI:5481 CHEBI:5493 KEGG:C00326 Glycoprotein chebi_ontology Glykoprotein Glykoproteine a glycoprotein glicoproteina glicoproteinas glycoproteine glycoproteines CHEBI:17089 glycoprotein CHEBI:17089 Glycoprotein KEGG_COMPOUND Glykoprotein ChEBI Glykoproteine ChEBI a glycoprotein UniProt glicoproteina ChEBI glicoproteinas ChEBI glycoproteine ChEBI glycoproteines ChEBI A molecular entity that can transfer ("donate") an electron, a pair of electrons, an atom or a group to another molecular entity. CHEBI:14202 CHEBI:4697 KEGG:C01351 Donor chebi_ontology Donator donneur CHEBI:17891 donor CHEBI:17891 Donor KEGG_COMPOUND Donator ChEBI donneur ChEBI 'Lipids' is a loosely defined term for substances of biological origin that are soluble in nonpolar solvents. They consist of saponifiable lipids, such as glycerides (fats and oils) and phospholipids, as well as nonsaponifiable lipids, principally steroids. CHEBI:14517 CHEBI:25054 CHEBI:6486 KEGG:C01356 Lipid chebi_ontology CHEBI:18059 lipid CHEBI:18059 Lipid KEGG_COMPOUND Any polysaccharide containing a substantial proportion of aminomonosaccharide residues. CHEBI:14361 CHEBI:24398 CHEBI:5495 KEGG:C02545 Wikipedia:Glycosaminoglycan Glycosaminoglycan chebi_ontology Glykosaminoglykan glicosaminoglicano glycosaminoglycane glycosaminoglycans CHEBI:18085 glycosaminoglycan CHEBI:18085 Glycosaminoglycan KEGG_COMPOUND Glykosaminoglykan ChEBI glicosaminoglicano IUPAC glycosaminoglycane IUPAC glycosaminoglycans ChEBI A biomacromolecule consisting of large numbers of monosaccharide residues linked glycosidically. This term is commonly used only for those containing more than ten monosaccharide residues. CHEBI:14864 CHEBI:26205 CHEBI:8322 KEGG:C00420 Polysaccharide chebi_ontology Glycan Glycane Glykan Glykane glycans polisacarido polisacaridos CHEBI:18154 polysaccharide CHEBI:18154 Polysaccharide KEGG_COMPOUND Glycan KEGG_COMPOUND Glycane ChEBI Glykan ChEBI Glykane ChEBI glycans IUPAC polisacarido ChEBI polisacaridos IUPAC That part of DNA or RNA that may be involved in pairing. CHEBI:13873 CHEBI:25598 CHEBI:2995 KEGG:C00701 Wikipedia:Nucleobase chebi_ontology Base nucleobases CHEBI:18282 nucleobase CHEBI:18282 Base KEGG_COMPOUND nucleobases ChEBI The R-enantiomer of noradrenaline. CHEBI:1 CHEBI:14668 CHEBI:25592 CHEBI:258884 CHEBI:43725 DrugBank:DB00368 HMDB:HMDB0000216 KEGG:C00547 KEGG:D00076 KNApSAcK:C00001424 PDBeChem:LNR Wikipedia:Norepinephrine chebi_ontology (-)-arterenol (-)-noradrenaline (-)-norepinephrine (R)-(-)-norepinephrine (R)-4-(2-amino-1-hydroxyethyl)-1,2-benzenediol (R)-norepinephrine 4-[(1R)-2-Amino-1-hydroxyethyl]-1,2-benzenediol Arterenol L-NOREPINEPHRINE L-Noradrenaline Noradrenaline Norepinephrine CHEBI:18357 (R)-noradrenaline CHEBI:18357 (-)-arterenol ChemIDplus (-)-noradrenaline IUPHAR (-)-norepinephrine ChemIDplus (R)-(-)-norepinephrine ChemIDplus (R)-4-(2-amino-1-hydroxyethyl)-1,2-benzenediol ChemIDplus (R)-norepinephrine ChemIDplus 4-[(1R)-2-Amino-1-hydroxyethyl]-1,2-benzenediol KEGG_COMPOUND Arterenol KEGG_COMPOUND L-NOREPINEPHRINE PDBeChem L-Noradrenaline KEGG_COMPOUND Noradrenaline KEGG_COMPOUND Norepinephrine KEGG_COMPOUND An organic group formed by removing one or more hydroxy groups from an oxoacid that has the general structure RkE(=O)l(OH)m (l =/= 0). Although the term is almost always applied to organic compounds, with carboxylic acid as the oxoacid, acyl groups can in principle be derived from other types of acids such as sulfonic acids or phosphonic acids. acyl group chebi_ontology acyl groups alkanoyl group groupe acyle CHEBI:22221 acyl group CHEBI:22221 acyl group IUPAC acyl groups ChEBI alkanoyl group ChEBI groupe acyle IUPAC Any of the naturally occurring, basic nitrogen compounds (mostly heterocyclic) occurring mostly in the plant kingdom, but also found in bacteria, fungi, and animals. By extension, certain neutral compounds biogenetically related to basic alkaloids are also classed as alkaloids. Amino acids, peptides, proteins, nucleotides, nucleic acids, amino sugars and antibiotics are not normally regarded as alkaloids. Compounds in which the nitrogen is exocyclic (dopamine, mescaline, serotonin, etc.) are usually classed as amines rather than alkaloids. Wikipedia:Alkaloid Alkaloid chebi_ontology Alkaloide alcaloide alcaloides CHEBI:22315 alkaloid CHEBI:22315 Alkaloid ChEBI Alkaloide ChEBI alcaloide ChEBI alcaloides ChEBI chebi_ontology aminoglycans CHEBI:22506 aminoglycan CHEBI:22506 aminoglycans ChEBI A monoatomic or polyatomic species having one or more elementary charges of the electron. Anion anion chebi_ontology Anionen aniones anions CHEBI:22563 anion CHEBI:22563 Anion ChEBI anion ChEBI Anionen ChEBI aniones ChEBI anions IUPAC A molecular entity having an available pair of electrons capable of forming a covalent bond with a hydron (Bronsted base) or with the vacant orbital of some other molecular entity (Lewis base). KEGG:C00701 Base base chebi_ontology Base1 Base2 Basen Nucleobase bases CHEBI:22695 base CHEBI:22695 Base ChEBI base ChEBI Base1 KEGG_COMPOUND Base2 KEGG_COMPOUND Basen ChEBI Nucleobase KEGG_COMPOUND bases ChEBI chebi_ontology benzopyrroles CHEBI:22728 benzopyrrole CHEBI:22728 benzopyrroles ChEBI Any compound that produces a peak used as reference frequency in the delta chemical shift scale. chebi_ontology NMR chemical shift reference compounds NMR chemical shift standard NMR chemical shift standards NMR internal standard NMR internal standards NMR reference standard NMR reference standards CHEBI:228364 NMR chemical shift reference compound CHEBI:228364 NMR chemical shift reference compounds ChEBI NMR chemical shift standard ChEBI NMR chemical shift standards ChEBI NMR internal standard ChEBI NMR internal standards ChEBI NMR reference standard ChEBI NMR reference standards ChEBI The univalent carboacyl group formed by loss of -OH from the carboxy group of carbamic acid. chebi_ontology -C(O)NH2 -CONH2 aminocarbonyl carbamyl carbamyl group carboxamide CHEBI:23004 carbamoyl group CHEBI:23004 -C(O)NH2 ChEBI -CONH2 IUPAC aminocarbonyl IUPAC carbamyl ChEBI carbamyl group ChEBI carboxamide IUPAC carbonyl group chebi_ontology >C=O CHEBI:23019 carbonyl group CHEBI:23019 carbonyl group ChEBI carbonyl group UniProt >C=O IUPAC An organic molecule or ion (usually a metal ion) that is required by an enzyme for its activity. It may be attached either loosely (coenzyme) or tightly (prosthetic group). Wikipedia:Cofactor_(biochemistry) cofactor chebi_ontology CHEBI:23357 cofactor CHEBI:23357 cofactor IUPAC Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. chebi_ontology entidad molecular entidades moleculares entite moleculaire molecular entities molekulare Entitaet CHEBI:23367 molecular entity CHEBI:23367 entidad molecular IUPAC entidades moleculares IUPAC entite moleculaire IUPAC molecular entities IUPAC molekulare Entitaet ChEBI chebi_ontology Cyclopeptid Zyklopeptid cyclic peptides peptide cyclique peptido ciclico CHEBI:23449 cyclic peptide CHEBI:23449 Cyclopeptid ChEBI Zyklopeptid ChEBI cyclic peptides ChEBI peptide cyclique IUPAC peptido ciclico IUPAC Any substance which when absorbed into a living organism may modify one or more of its functions. The term is generally accepted for a substance taken for a therapeutic purpose, but is also commonly used for abused substances. chebi_ontology drugs medicine CHEBI:23888 drug CHEBI:23888 drugs ChEBI medicine ChEBI A compound or agent that combines with an enzyme in such a manner as to prevent the normal substrate-enzyme combination and the catalytic reaction. chebi_ontology enzyme inhibitors inhibidor enzimatico inhibidores enzimaticos inhibiteur enzymatique inhibiteurs enzymatiques CHEBI:23924 enzyme inhibitor CHEBI:23924 enzyme inhibitors ChEBI inhibidor enzimatico ChEBI inhibidores enzimaticos ChEBI inhibiteur enzymatique ChEBI inhibiteurs enzymatiques ChEBI A chemical entity is a physical entity of interest in chemistry including molecular entities, parts thereof, and chemical substances. chemical entity chebi_ontology CHEBI:24431 chemical entity CHEBI:24431 chemical entity UniProt A role played by the molecular entity or part thereof within a biological context. chebi_ontology biological function CHEBI:24432 biological role CHEBI:24432 biological function ChEBI A defined linked collection of atoms or a single atom within a molecular entity. chebi_ontology Gruppe Rest groupe grupo grupos CHEBI:24433 group CHEBI:24433 Gruppe ChEBI Rest ChEBI groupe IUPAC grupo IUPAC grupos IUPAC A cyclic compound having as ring members atoms of carbon and at least of one other element. chebi_ontology organic heterocycle organic heterocyclic compounds CHEBI:24532 organic heterocyclic compound CHEBI:24532 organic heterocycle ChEBI organic heterocyclic compounds ChEBI A heterodetic cyclic peptide is a peptide consisting only of amino-acid residues, but in which the linkages forming the ring are not solely peptide bonds; one or more is an isopeptide, disulfide, ester, or other bond. chebi_ontology heterodetic cyclic peptides peptide cyclique heterodetique peptido ciclico heterodetico CHEBI:24533 heterodetic cyclic peptide CHEBI:24533 heterodetic cyclic peptides ChEBI peptide cyclique heterodetique IUPAC peptido ciclico heterodetico IUPAC Originally referring to an endogenous compound that is formed in specialized organ or group of cells and carried to another organ or group of cells, in the same organism, upon which it has a specific regulatory function, the term is now commonly used to include non-endogenous, semi-synthetic and fully synthetic analogues of such compounds. chebi_ontology endocrine hormones CHEBI:24621 hormone CHEBI:24621 endocrine ChEBI hormones ChEBI Hydroxides are chemical compounds containing a hydroxy group or salts containing hydroxide (OH(-)). chebi_ontology CHEBI:24651 hydroxides CHEBI:24651 Any compound containing an indole skeleton. chebi_ontology CHEBI:24828 indoles CHEBI:24828 A compound which contains oxygen, at least one other element, and at least one hydrogen bound to oxygen, and which produces a conjugate base by loss of positive hydrogen ion(s) (hydrons). chebi_ontology oxacids oxiacids oxo acid oxy-acids oxyacids CHEBI:24833 oxoacid CHEBI:24833 oxacids ChEBI oxiacids ChEBI oxo acid ChEBI oxy-acids ChEBI oxyacids ChEBI chebi_ontology inorganic anions CHEBI:24834 inorganic anion CHEBI:24834 inorganic anions ChEBI A molecular entity that contains no carbon. chebi_ontology anorganische Verbindungen inorganic compounds inorganic entity inorganic molecular entities inorganics CHEBI:24835 inorganic molecular entity CHEBI:24835 anorganische Verbindungen ChEBI inorganic compounds ChEBI inorganic entity ChEBI inorganic molecular entities ChEBI inorganics ChEBI chebi_ontology inorganic oxides CHEBI:24836 inorganic oxide CHEBI:24836 inorganic oxides ChEBI chebi_ontology monoatomic ions CHEBI:24867 monoatomic ion CHEBI:24867 monoatomic ions ChEBI A molecular entity having a net electric charge. Ion ion chebi_ontology Ionen iones ions CHEBI:24870 ion CHEBI:24870 Ion ChEBI ion ChEBI Ionen ChEBI iones ChEBI ions ChEBI Any intermediate or product resulting from metabolism. The term 'metabolite' subsumes the classes commonly known as primary and secondary metabolites. CHEBI:26619 CHEBI:35220 chebi_ontology metabolites primary metabolites secondary metabolites CHEBI:25212 metabolite CHEBI:25212 metabolites ChEBI primary metabolites ChEBI secondary metabolites ChEBI A molecule all atoms of which have the same atomic number. chebi_ontology homoatomic molecule homoatomic molecules CHEBI:25362 elemental molecule CHEBI:25362 homoatomic molecule ChEBI homoatomic molecules ChEBI Any polyatomic entity that is an electrically neutral entity consisting of more than one atom. molecule chebi_ontology Molekuel molecula molecules neutral molecular compounds CHEBI:25367 molecule CHEBI:25367 molecule IUPAC Molekuel ChEBI molecula IUPAC molecules IUPAC neutral molecular compounds IUPAC A group of neurotransmitters and neuromodulators that contain one amino group that is connected to an aromatic ring by ethylene group (-CH2-CH2-). Monoamines are derived from the aromatic amino acids phenylalanine, tyrosine, histidine and tryptophan. chebi_ontology monamines monoamines CHEBI:25375 monoamine molecular messenger CHEBI:25375 monamines ChEBI monoamines ChEBI An oxoacid containing a single carboxy group. chebi_ontology monocarboxylic acids CHEBI:25384 monocarboxylic acid CHEBI:25384 monocarboxylic acids ChEBI An endogenous compound that is used to transmit information across the synapse between a neuron and another cell. Wikipedia:Neurotransmitter chebi_ontology neurotransmitters CHEBI:25512 neurotransmitter CHEBI:25512 neurotransmitters ChEBI WebElements:N chebi_ontology 7N N Stickstoff azote nitrogen nitrogeno CHEBI:25555 nitrogen atom CHEBI:25555 7N IUPAC N IUPAC Stickstoff ChEBI azote IUPAC nitrogen ChEBI nitrogeno ChEBI chebi_ontology Nichtmetall Nichtmetalle no metal no metales non-metal non-metaux nonmetal nonmetals CHEBI:25585 nonmetal atom CHEBI:25585 Nichtmetall ChEBI Nichtmetalle ChEBI no metal ChEBI no metales ChEBI non-metal ChEBI non-metaux ChEBI nonmetal ChEBI nonmetals ChEBI Any organic ion with a net negative charge. chebi_ontology organic anions CHEBI:25696 organic anion CHEBI:25696 organic anions ChEBI Any organic ion with a net positive charge. chebi_ontology organic cations CHEBI:25697 organic cation CHEBI:25697 organic cations ChEBI chebi_ontology organic ions CHEBI:25699 organic ion CHEBI:25699 organic ions ChEBI Compounds of the general formula SO3HOR where R is an organyl group chebi_ontology organic sulfates CHEBI:25704 organic sulfate CHEBI:25704 organic sulfates ChEBI An oxide is a chemical compound of oxygen with other chemical elements. oxide chebi_ontology oxides CHEBI:25741 oxide CHEBI:25741 oxide ChEBI oxides ChEBI KEGG:C00007 WebElements:O chebi_ontology 8O O Sauerstoff oxigeno oxygen oxygene CHEBI:25805 oxygen atom CHEBI:25805 8O IUPAC O IUPAC Sauerstoff ChEBI oxigeno ChEBI oxygen ChEBI oxygene ChEBI oxygen molecular entity chebi_ontology oxygen molecular entities CHEBI:25806 oxygen molecular entity CHEBI:25806 oxygen molecular entity ChEBI oxygen molecular entities ChEBI Any peptide with hormonal activity in animals, whether endocrine, neuroendocrine, or paracrine. chebi_ontology peptide hormones polypeptide hormone CHEBI:25905 peptide hormone CHEBI:25905 peptide hormones ChEBI polypeptide hormone ChEBI Any steroid that acts as hormone. chebi_ontology Steroidhormon Steroidhormone hormona esteroide hormonas esteroideas hormone steroide hormones steroides steroid hormones CHEBI:26764 steroid hormone CHEBI:26764 Steroidhormon ChEBI Steroidhormone ChEBI hormona esteroide ChEBI hormonas esteroideas ChEBI hormone steroide ChEBI hormones steroides ChEBI steroid hormones ChEBI An ester of an alcohol and sulfuric acid. chebi_ontology sulfate ester sulfuric acid ester sulfuric acid esters CHEBI:26819 sulfuric ester CHEBI:26819 sulfate ester ChEBI sulfuric acid ester ChEBI sulfuric acid esters ChEBI Salts and esters of sulfuric acid sulfates chebi_ontology sulfuric acid derivative sulphates CHEBI:26820 sulfates CHEBI:26820 sulfates ChEBI sulfuric acid derivative ChEBI sulphates ChEBI KEGG:C00087 KEGG:D06527 PPDB:605 WebElements:S chebi_ontology 16S Elemental sulfur S Schwefel azufre soufre sulfur sulphur theion CHEBI:26833 sulfur atom CHEBI:26833 16S IUPAC Elemental sulfur KEGG_COMPOUND S IUPAC S KEGG_COMPOUND Schwefel ChEBI azufre ChEBI soufre ChEBI sulfur ChEBI sulfur UniProt sulphur ChEBI theion IUPAC sulfur molecular entity chebi_ontology sulfur molecular entities CHEBI:26835 sulfur molecular entity CHEBI:26835 sulfur molecular entity ChEBI sulfur molecular entities ChEBI A sulfur oxoacid that consists of two oxo and two hydroxy groups joined covalently to a central sulfur atom. KEGG:C00059 KEGG:D05963 KNApSAcK:C00007530 MolBase:4 PPDB:606 Wikipedia:Sulfuric_acid Sulfuric acid sulfuric acid chebi_ontology Acide sulfurique Acido sulfurico Acidum sulfuricum H2SO4 Schwefelsaeureloesungen [S(OH)2O2] [SO2(OH)2] sulphuric acid CHEBI:26836 sulfuric acid CHEBI:26836 Sulfuric acid KEGG_COMPOUND sulfuric acid ChEBI Acide sulfurique ChemIDplus Acido sulfurico ChemIDplus Acidum sulfuricum ChemIDplus H2SO4 IUPAC Schwefelsaeureloesungen ChemIDplus [S(OH)2O2] MolBase [SO2(OH)2] IUPAC sulphuric acid MolBase Any nutrient required in small quantities by organisms throughout their life in order to orchestrate a range of physiological functions. Wikipedia:Micronutrient chebi_ontology micronutrients trace elements CHEBI:27027 micronutrient CHEBI:27027 micronutrients ChEBI trace elements ChEBI Tryptamine and its substitution derivatives. chebi_ontology CHEBI:27162 tryptamines CHEBI:27162 chebi_ontology heterobicyclic compounds organic heterobicyclic compounds CHEBI:27171 organic heterobicyclic compound CHEBI:27171 heterobicyclic compounds ChEBI organic heterobicyclic compounds ChEBI A univalent carboacyl group is a group formed by loss of OH from the carboxy group of a carboxylic acid. chebi_ontology univalent acyl group univalent carboacyl groups univalent carboxylic acyl groups CHEBI:27207 univalent carboacyl group CHEBI:27207 univalent acyl group ChEBI univalent carboacyl groups ChEBI univalent carboxylic acyl groups ChEBI A neutral compound having formal unit electrical charges of opposite sign on non-adjacent atoms. Sometimes referred to as inner salts, dipolar ions (a misnomer). chebi_ontology compose zwitterionique compuestos zwitterionicos zwitteriones zwitterionic compounds CHEBI:27369 zwitterion CHEBI:27369 compose zwitterionique IUPAC compuestos zwitterionicos IUPAC zwitteriones IUPAC zwitterionic compounds IUPAC CHEBI:23009 CHEBI:3399 KEGG:C06265 WebElements:C chebi_ontology 6C C Carbon Kohlenstoff carbon carbone carbonium carbono CHEBI:27594 carbon atom CHEBI:27594 6C IUPAC C IUPAC C KEGG_COMPOUND Carbon KEGG_COMPOUND Kohlenstoff ChEBI carbon ChEBI carbone ChEBI carbonium ChEBI carbono ChEBI A one-carbon compound that is ammonia in which one of the hydrogens is replaced by a carboxy group. Although carbamic acid derivatives are common, carbamic acid itself has never been synthesised. CHEBI:22504 CHEBI:23002 CHEBI:3386 CHEBI:44573 DrugBank:DB04261 KEGG:C01563 PDBeChem:OUT Wikipedia:Carbamic_acid CARBAMIC ACID Carbamic acid chebi_ontology Aminoameisensaeure Aminoformic acid Carbamate Carbamidsaeure CHEBI:28616 carbamic acid CHEBI:28616 CARBAMIC ACID PDBeChem Carbamic acid KEGG_COMPOUND Aminoameisensaeure ChEBI Aminoformic acid KEGG_COMPOUND Carbamate KEGG_COMPOUND Carbamidsaeure ChEBI A primary amino compound that is the 5-hydroxy derivative of tryptamine. CHEBI:1420 CHEBI:26652 CHEBI:49894 HMDB:HMDB0000259 KEGG:C00780 KNApSAcK:C00001429 LINCS:LSM-6589 MetaCyc:SEROTONIN PDBeChem:SRO Wikipedia:Serotonin SEROTONIN Serotonin chebi_ontology 3-(2-Aminoethyl)-1H-indol-5-ol 5-HT 5-Hydroxytryptamine Enteramine serotonine thrombocytin thrombotonin CHEBI:28790 serotonin CHEBI:28790 SEROTONIN PDBeChem Serotonin KEGG_COMPOUND 3-(2-Aminoethyl)-1H-indol-5-ol KEGG_COMPOUND 5-HT IUPHAR 5-Hydroxytryptamine KEGG_COMPOUND Enteramine KEGG_COMPOUND serotonine ChEBI thrombocytin ChemIDplus thrombotonin ChemIDplus An onium cation obtained by protonation of ammonia. CHEBI:22534 CHEBI:49783 CHEBI:7435 KEGG:C01342 MetaCyc:AMMONIUM MolBase:929 PDBeChem:NH4 Wikipedia:Ammonium ammonium chebi_ontology Ammonium(1+) NH4(+) NH4+ [NH4](+) ammonium cation ammonium ion CHEBI:28938 ammonium CHEBI:28938 ammonium ChEBI Ammonium(1+) ChemIDplus NH4(+) IUPAC NH4(+) UniProt NH4+ KEGG_COMPOUND [NH4](+) MolBase ammonium cation ChemIDplus ammonium ion PDBeChem The conjugate base formed when the carboxy group of a carboxylic acid is deprotonated. CHEBI:13626 CHEBI:13945 CHEBI:23026 CHEBI:58657 chebi_ontology a carboxylate carboxylic acid anions carboxylic anions CHEBI:29067 carboxylic acid anion CHEBI:29067 a carboxylate UniProt carboxylic acid anions ChEBI carboxylic anions ChEBI chebi_ontology NH2(-) CHEBI:29337 azanide CHEBI:29337 NH2(-) IUPAC A divalent inorganic anion resulting from the removal of two protons from ammonia. chebi_ontology NH(2-) imide CHEBI:29340 hydridonitrate(2-) CHEBI:29340 NH(2-) IUPAC imide IUPAC chebi_ontology HO2(+) HOO(+) [HO2](+) CHEBI:29793 hydridodioxygen(1+) CHEBI:29793 HO2(+) IUPAC HOO(+) ChEBI [HO2](+) ChEBI A monocarboxylic acid anion resulting from the removal of a proton from the carboxy group of acetic acid. CHEBI:13704 CHEBI:22165 CHEBI:40480 DrugBank:DB03166 KEGG:C00033 MetaCyc:ACET PDBeChem:ACT Wikipedia:Acetate acetate chebi_ontology ACETATE ION Azetat CH3-COO(-) Ethanoat MeCO2 anion acetic acid, ion(1-) ethanoate CHEBI:30089 acetate CHEBI:30089 acetate UniProt ACETATE ION PDBeChem Azetat ChEBI CH3-COO(-) IUPAC Ethanoat ChEBI MeCO2 anion NIST_Chemistry_WebBook acetic acid, ion(1-) ChemIDplus ethanoate ChEBI Particle of zero charge, zero rest mass, spin quantum number 1, energy hnu and momentum hnu/c (h is the Planck constant, nu the frequency of radiation and c the speed of light), carrier of electromagnetic force. CHEBI:10581 CHEBI:14383 KEGG:C00205 chebi_ontology Lichtquant Light foton gamma hnu light quantum CHEBI:30212 photon CHEBI:30212 Lichtquant ChEBI Light KEGG_COMPOUND foton ChEBI gamma IUPAC hnu IUPAC hnu UniProt light quantum ChEBI A compound formally derived from ammonia by replacing one, two or three hydrogen atoms by hydrocarbyl groups. CHEBI:13814 CHEBI:22474 CHEBI:2641 KEGG:C00706 Amine chebi_ontology Amin Substituted amine CHEBI:32952 amine CHEBI:32952 Amine KEGG_COMPOUND Amin ChEBI Substituted amine KEGG_COMPOUND An amide is a derivative of an oxoacid RkE(=O)l(OH)m (l =/= 0) in which an acidic hydroxy group has been replaced by an amino or substituted amino group. CHEBI:22473 CHEBI:2633 KEGG:C00241 Amide chebi_ontology CHEBI:32988 amide CHEBI:32988 Amide KEGG_COMPOUND Intended use of the molecular entity or part thereof by humans. chebi_ontology CHEBI:33232 application CHEBI:33232 A particle not known to have substructure. chebi_ontology elementary particles CHEBI:33233 fundamental particle CHEBI:33233 elementary particles ChEBI A monoatomic entity is a molecular entity consisting of a single atom. chebi_ontology atomic entity monoatomic entities CHEBI:33238 monoatomic entity CHEBI:33238 atomic entity ChEBI monoatomic entities ChEBI chebi_ontology oxoacid derivatives CHEBI:33241 oxoacid derivative CHEBI:33241 oxoacid derivatives ChEBI chebi_ontology inorganic hydrides CHEBI:33242 inorganic hydride CHEBI:33242 inorganic hydrides ChEBI Any substituent group which does not contain carbon. chebi_ontology inorganic groups CHEBI:33246 inorganic group CHEBI:33246 inorganic groups ChEBI Any substituent group or skeleton containing carbon. chebi_ontology organic groups CHEBI:33247 organic group CHEBI:33247 organic groups ChEBI Any organic substituent group, regardless of functional type, having one free valence at a carbon atom. chebi_ontology groupe organyle grupo organilo grupos organilo CHEBI:33249 organyl group CHEBI:33249 groupe organyle IUPAC grupo organilo IUPAC grupos organilo IUPAC A chemical entity constituting the smallest component of an element having the chemical properties of the element. CHEBI:22671 CHEBI:23907 chebi_ontology atome atomo atoms atomus element elements CHEBI:33250 atom CHEBI:33250 atome IUPAC atomo IUPAC atoms ChEBI atomus ChEBI element ChEBI elements ChEBI A nucleus is the positively charged central portion of an atom, excluding the orbital electrons. chebi_ontology Atomkern Kern noyau noyau atomique nuclei nucleo nucleo atomico nucleus atomi CHEBI:33252 atomic nucleus CHEBI:33252 Atomkern ChEBI Kern ChEBI noyau IUPAC noyau atomique ChEBI nuclei ChEBI nucleo IUPAC nucleo atomico ChEBI nucleus atomi ChEBI Heavy nuclear particle: proton or neutron. nucleon chebi_ontology Nukleon Nukleonen nucleons CHEBI:33253 nucleon CHEBI:33253 nucleon IUPAC Nukleon ChEBI Nukleonen ChEBI nucleons ChEBI A derivative of an oxoacid RkE(=O)l(OH)m (l =/= 0) in which an acidic hydroxy group has been replaced by an amino or substituted amino group. primary amide chebi_ontology CHEBI:33256 primary amide CHEBI:33256 primary amide IUPAC A molecular entity all atoms of which have the same atomic number. chebi_ontology homoatomic entity homoatomic molecular entities homoatomic molecular entity CHEBI:33259 elemental molecular entity CHEBI:33259 homoatomic entity ChEBI homoatomic molecular entities ChEBI homoatomic molecular entity ChEBI chebi_ontology CHEBI:33262 elemental oxygen CHEBI:33262 chebi_ontology CHEBI:33263 diatomic oxygen CHEBI:33263 An anion consisting of more than one atom. chebi_ontology polyatomic anions CHEBI:33273 polyatomic anion CHEBI:33273 polyatomic anions ChEBI chebi_ontology chemical messenger CHEBI:33280 molecular messenger CHEBI:33280 chemical messenger ChEBI A substance that kills or slows the growth of microorganisms, including bacteria, viruses, fungi and protozoans. CHEBI:22582 chebi_ontology Antibiotika Antibiotikum antibiotic antibiotics antibiotique antimicrobial antimicrobial agents antimicrobials microbicide microbicides CHEBI:33281 antimicrobial agent CHEBI:33281 Antibiotika ChEBI Antibiotikum ChEBI antibiotic ChEBI antibiotics ChEBI antibiotique IUPAC antimicrobial ChEBI antimicrobial agents ChEBI antimicrobials ChEBI microbicide ChEBI microbicides ChEBI A nutrient is a food component that an organism uses to survive and grow. chebi_ontology nutrients CHEBI:33284 nutrient CHEBI:33284 nutrients ChEBI A heteroorganic entity is an organic molecular entity in which carbon atoms or organic groups are bonded directly to one or more heteroatoms. chebi_ontology heteroorganic entities organoelement compounds CHEBI:33285 heteroorganic entity CHEBI:33285 heteroorganic entities ChEBI organoelement compounds ChEBI Any p-block element atom that is in group 15 of the periodic table: nitrogen, phosphorus, arsenic, antimony and bismuth. chebi_ontology group 15 elements group V elements nitrogenoideos nitrogenoides pnictogene pnictogenes CHEBI:33300 pnictogen CHEBI:33300 group 15 elements ChEBI group V elements ChEBI nitrogenoideos ChEBI nitrogenoides ChEBI pnictogene ChEBI pnictogenes ChEBI A p-block molecular entity containing any pnictogen. pnictogen molecular entity chebi_ontology pnictogen molecular entities CHEBI:33302 pnictogen molecular entity CHEBI:33302 pnictogen molecular entity ChEBI pnictogen molecular entities ChEBI Any p-block element belonging to the group 16 family of the periodic table. chebi_ontology Chalkogen Chalkogene anfigeno anfigenos calcogeno calcogenos chalcogene chalcogenes group 16 elements group VI elements CHEBI:33303 chalcogen CHEBI:33303 Chalkogen ChEBI Chalkogene ChEBI anfigeno ChEBI anfigenos ChEBI calcogeno ChEBI calcogenos ChEBI chalcogene ChEBI chalcogenes ChEBI group 16 elements ChEBI group VI elements ChEBI Any p-block molecular entity containing a chalcogen. chalcogen molecular entity chebi_ontology chalcogen compounds chalcogen molecular entities CHEBI:33304 chalcogen molecular entity CHEBI:33304 chalcogen molecular entity ChEBI chalcogen compounds ChEBI chalcogen molecular entities ChEBI chebi_ontology carbon group element carbon group elements carbonoides cristallogene cristallogenes group IV elements CHEBI:33306 carbon group element atom CHEBI:33306 carbon group element ChEBI carbon group elements ChEBI carbonoides ChEBI cristallogene ChEBI cristallogenes ChEBI group IV elements ChEBI An ester of a carboxylic acid, R(1)C(=O)OR(2), where R(1) = H or organyl and R(2) = organyl. CHEBI:13204 CHEBI:23028 CHEBI:3408 KEGG:C02391 Wikipedia:Ester Carboxylic ester chebi_ontology a carboxylic ester carboxylic acid esters CHEBI:33308 carboxylic ester CHEBI:33308 Carboxylic ester KEGG_COMPOUND a carboxylic ester UniProt carboxylic acid esters ChEBI An atom belonging to one of the main groups (found in the s- and p- blocks) of the periodic table. chebi_ontology Hauptgruppenelement Hauptgruppenelemente main group element CHEBI:33318 main group element atom CHEBI:33318 Hauptgruppenelement ChEBI Hauptgruppenelemente ChEBI main group element ChEBI chebi_ontology oxoacids of sulfur sulfur oxoacids CHEBI:33402 sulfur oxoacid CHEBI:33402 oxoacids of sulfur ChEBI sulfur oxoacids ChEBI sulfur oxoacid derivative chebi_ontology sulfur oxoacid derivatives CHEBI:33424 sulfur oxoacid derivative CHEBI:33424 sulfur oxoacid derivative ChEBI sulfur oxoacid derivatives ChEBI sulfur oxoanion chebi_ontology oxoanions of sulfur sulfur oxoanions CHEBI:33482 sulfur oxoanion CHEBI:33482 sulfur oxoanion ChEBI oxoanions of sulfur ChEBI sulfur oxoanions ChEBI chalcogen oxoacid chebi_ontology chalcogen oxoacids CHEBI:33484 chalcogen oxoacid CHEBI:33484 chalcogen oxoacid ChEBI chalcogen oxoacids ChEBI chalcogen oxoanion chebi_ontology chalcogen oxoanions CHEBI:33485 chalcogen oxoanion CHEBI:33485 chalcogen oxoanion ChEBI chalcogen oxoanions ChEBI An amino-acid anion obtained by deprotonation of any alpha-amino acid. chebi_ontology alpha-amino acid anion alpha-amino acid anions alpha-amino-acid anions CHEBI:33558 alpha-amino-acid anion CHEBI:33558 alpha-amino acid anion ChEBI alpha-amino acid anions ChEBI alpha-amino-acid anions ChEBI chebi_ontology s-block element s-block elements CHEBI:33559 s-block element atom CHEBI:33559 s-block element ChEBI s-block elements ChEBI Any main group element atom belonging to the p-block of the periodic table. chebi_ontology p-block element p-block elements CHEBI:33560 p-block element atom CHEBI:33560 p-block element ChEBI p-block elements ChEBI Any compound containing an o-diphenol component. CHEBI:134187 CHEBI:13628 CHEBI:18862 KEGG:C15571 chebi_ontology 1,2-benzenediols a catechol benzene-1,2-diols CHEBI:33566 catechols CHEBI:33566 1,2-benzenediols ChEBI a catechol UniProt benzene-1,2-diols ChEBI 4-(2-Aminoethyl)pyrocatechol [4-(2-aminoethyl)benzene-1,2-diol] and derivatives formed by substitution. CHEBI:23056 CHEBI:3468 KEGG:C02012 Catecholamine chebi_ontology catecholamines CHEBI:33567 catecholamine CHEBI:33567 Catecholamine KEGG_COMPOUND catecholamines ChEBI A catecholamine in which C-1 of the aminoethyl side-chain is hydroxy-substituted. LINCS:LSM-5181 chebi_ontology noradrenalina norepinephrine CHEBI:33569 noradrenaline CHEBI:33569 noradrenalina ChEBI norepinephrine ChEBI CHEBI:22705 CHEBI:22711 chebi_ontology CHEBI:33570 benzenediols CHEBI:33570 The S-enantiomer of noradrenaline. LINCS:LSM-37072 chebi_ontology CHEBI:33571 (S)-noradrenaline CHEBI:33571 A carbon oxoacid acid carrying at least one -C(=O)OH group and having the structure RC(=O)OH, where R is any any monovalent functional group. Carboxylic acids are the most common type of organic acid. CHEBI:13428 CHEBI:13627 CHEBI:23027 Wikipedia:Carboxylic_acid chebi_ontology Carbonsaeure Carbonsaeuren Karbonsaeure RC(=O)OH acide carboxylique acides carboxyliques acido carboxilico acidos carboxilicos CHEBI:33575 carboxylic acid CHEBI:33575 Carbonsaeure ChEBI Carbonsaeuren ChEBI Karbonsaeure ChEBI RC(=O)OH IUPAC acide carboxylique IUPAC acides carboxyliques IUPAC acido carboxilico IUPAC acidos carboxilicos IUPAC A molecular entity containing one or more atoms from any of groups 1, 2, 13, 14, 15, 16, 17, and 18 of the periodic table. chebi_ontology main group compounds main group molecular entities CHEBI:33579 main group molecular entity CHEBI:33579 main group compounds ChEBI main group molecular entities ChEBI carbon group molecular entity chebi_ontology carbon group molecular entities CHEBI:33582 carbon group molecular entity CHEBI:33582 carbon group molecular entity ChEBI carbon group molecular entities ChEBI Any molecule that consists of a series of atoms joined together to form a ring. Wikipedia:Cyclic_compound chebi_ontology cyclic compounds CHEBI:33595 cyclic compound CHEBI:33595 cyclic compounds ChEBI chebi_ontology hydrogen compounds hydrogen molecular entities CHEBI:33608 hydrogen molecular entity CHEBI:33608 hydrogen compounds ChEBI hydrogen molecular entities ChEBI chebi_ontology polycyclic compounds CHEBI:33635 polycyclic compound CHEBI:33635 polycyclic compounds ChEBI A molecule that features two fused rings. chebi_ontology bicyclic compounds CHEBI:33636 bicyclic compound CHEBI:33636 bicyclic compounds ChEBI A cyclically conjugated molecular entity with a stability (due to delocalization) significantly greater than that of a hypothetical localized structure (e.g. Kekule structure) is said to possess aromatic character. chebi_ontology aromatics aromatische Verbindungen CHEBI:33655 aromatic compound CHEBI:33655 aromatics ChEBI aromatische Verbindungen ChEBI chebi_ontology organic aromatic compounds CHEBI:33659 organic aromatic compound CHEBI:33659 organic aromatic compounds ChEBI A polycyclic compound in which at least one of the rings contains at least one non-carbon atom. chebi_ontology polyheterocyclic compounds CHEBI:33671 heteropolycyclic compound CHEBI:33671 polyheterocyclic compounds ChEBI A bicyclic compound in which at least one of the rings contains at least one skeletal heteroatom. chebi_ontology CHEBI:33672 heterobicyclic compound CHEBI:33672 An s-block molecular entity is a molecular entity containing one or more atoms of an s-block element. s-block molecular entity chebi_ontology s-block compounds s-block molecular entities CHEBI:33674 s-block molecular entity CHEBI:33674 s-block molecular entity ChEBI s-block compounds ChEBI s-block molecular entities ChEBI A main group molecular entity that contains one or more atoms of a p-block element. chebi_ontology p-block compounds p-block molecular entities p-block molecular entitiy CHEBI:33675 p-block molecular entity CHEBI:33675 p-block compounds ChEBI p-block molecular entities ChEBI p-block molecular entitiy ChEBI Hydrides are chemical compounds of hydrogen with other chemical elements. chebi_ontology CHEBI:33692 hydrides CHEBI:33692 oxygen hydride chebi_ontology hydrides of oxygen oxygen hydrides CHEBI:33693 oxygen hydride CHEBI:33693 oxygen hydride ChEBI hydrides of oxygen ChEBI oxygen hydrides ChEBI A macromolecule formed by a living organism. chebi_ontology Biopolymere biomacromolecules biopolymers CHEBI:33694 biomacromolecule CHEBI:33694 Biopolymere ChEBI biomacromolecules ChEBI biopolymers ChEBI chebi_ontology genetically encoded biomacromolecules genetically encoded biopolymers information biomacromolecules information biopolymers information macromolecule information macromolecules CHEBI:33695 information biomacromolecule CHEBI:33695 genetically encoded biomacromolecules ChEBI genetically encoded biopolymers ChEBI information biomacromolecules ChEBI information biopolymers ChEBI information macromolecule ChEBI information macromolecules ChEBI A macromolecule made up of nucleotide units and hydrolysable into certain pyrimidine or purine bases (usually adenine, cytosine, guanine, thymine, uracil), D-ribose or 2-deoxy-D-ribose and phosphoric acid. chebi_ontology NA Nukleinsaeure Nukleinsaeuren acide nucleique acides nucleiques acido nucleico acidos nucleicos CHEBI:33696 nucleic acid CHEBI:33696 NA ChEBI Nukleinsaeure ChEBI Nukleinsaeuren ChEBI acide nucleique ChEBI acides nucleiques ChEBI acido nucleico ChEBI acidos nucleicos ChEBI High molecular weight, linear polymers, composed of nucleotides containing ribose and linked by phosphodiester bonds; RNA is central to the synthesis of proteins. ribonucleic acid chebi_ontology RNA RNS Ribonukleinsaeure pentosenucleic acids ribonucleic acids ribose nucleic acid yeast nucleic acid CHEBI:33697 ribonucleic acid CHEBI:33697 ribonucleic acid IUPAC RNA IUPAC RNA UniProt RNS ChEBI Ribonukleinsaeure ChEBI pentosenucleic acids ChemIDplus ribonucleic acids ChEBI ribose nucleic acid ChEBI yeast nucleic acid ChEBI chebi_ontology canonical amino-acid residue canonical amino-acid residues common amino acid residues proteinogenic amino-acid residues standard amino acid residues standard amino-acid residues CHEBI:33700 proteinogenic amino-acid residue CHEBI:33700 canonical amino-acid residue ChEBI canonical amino-acid residues ChEBI common amino acid residues ChEBI proteinogenic amino-acid residues ChEBI standard amino acid residues ChEBI standard amino-acid residues ChEBI A cation consisting of more than one atom. chebi_ontology polyatomic cations CHEBI:33702 polyatomic cation CHEBI:33702 polyatomic cations ChEBI chebi_ontology amino acid cation amino acid cations amino-acid cations CHEBI:33703 amino-acid cation CHEBI:33703 amino acid cation ChEBI amino acid cations ChEBI amino-acid cations ChEBI An amino acid in which the amino group is located on the carbon atom at the position alpha to the carboxy group. CHEBI:10208 CHEBI:13779 CHEBI:22442 CHEBI:2642 KEGG:C00045 KEGG:C05167 chebi_ontology Amino acid Amino acids alpha-amino acids alpha-amino carboxylic acids CHEBI:33704 alpha-amino acid CHEBI:33704 Amino acid KEGG_COMPOUND Amino acids KEGG_COMPOUND alpha-amino acids ChEBI alpha-amino acids JCBN alpha-amino carboxylic acids IUPAC When two or more amino acids combine to form a peptide, the elements of water are removed, and what remains of each amino acid is called an amino-acid residue. chebi_ontology amino acid residue amino acid residues amino-acid residues CHEBI:33708 amino-acid residue CHEBI:33708 amino acid residue ChEBI amino acid residues ChEBI amino-acid residues JCBN A carboxylic acid containing one or more amino groups. CHEBI:13815 CHEBI:22477 Wikipedia:Amino_acid chebi_ontology Aminocarbonsaeure Aminokarbonsaeure Aminosaeure amino acids CHEBI:33709 amino acid CHEBI:33709 Aminocarbonsaeure ChEBI Aminokarbonsaeure ChEBI Aminosaeure ChEBI amino acids ChEBI An amino-acid residue derived from an alpha-amino acid. chebi_ontology alpha-amino-acid residues an alpha-amino acid residue CHEBI:33710 alpha-amino-acid residue CHEBI:33710 alpha-amino-acid residues ChEBI an alpha-amino acid residue UniProt chebi_ontology alpha-amino acid cation alpha-amino acid cations alpha-amino-acid cations CHEBI:33719 alpha-amino-acid cation CHEBI:33719 alpha-amino acid cation ChEBI alpha-amino acid cations ChEBI alpha-amino-acid cations ChEBI carbohydrate acid chebi_ontology carbohydrate acids CHEBI:33720 carbohydrate acid CHEBI:33720 carbohydrate acid ChEBI carbohydrate acids ChEBI carbohydrate acid anion chebi_ontology carbohydrate acid anions CHEBI:33721 carbohydrate acid anion CHEBI:33721 carbohydrate acid anion ChEBI carbohydrate acid anions ChEBI chebi_ontology canonical nucleoside residues common nucleoside residues nucleoside residue standard nucleoside residues CHEBI:33791 canonical nucleoside residue CHEBI:33791 canonical nucleoside residues ChEBI common nucleoside residues CBN nucleoside residue CBN standard nucleoside residues ChEBI chebi_ontology N Nuc canonical ribonucleoside residues common ribonucleoside residue common ribonucleoside residues standard ribonucleoside residues CHEBI:33792 canonical ribonucleoside residue CHEBI:33792 N CBN Nuc CBN canonical ribonucleoside residues ChEBI common ribonucleoside residue CBN common ribonucleoside residues CBN standard ribonucleoside residues ChEBI An organic compound having at least one hydroxy group attached to a carbon atom. CHEBI:64710 chebi_ontology organic alcohol organic hydroxy compounds CHEBI:33822 organic hydroxy compound CHEBI:33822 organic alcohol ChEBI organic hydroxy compounds ChEBI Any organic molecule that consists of atoms connected in the form of a ring. chebi_ontology organic cyclic compounds CHEBI:33832 organic cyclic compound CHEBI:33832 organic cyclic compounds ChEBI A heterocyclic compound formally derived from an arene by replacement of one or more methine (-C=) and/or vinylene (-CH=CH-) groups by trivalent or divalent heteroatoms, respectively, in such a way as to maintain the continuous pi-electron system characteristic of aromatic systems and a number of out-of-plane pi-electrons corresponding to the Hueckel rule (4n+2). chebi_ontology hetarenes CHEBI:33833 heteroarene CHEBI:33833 hetarenes IUPAC Conjugated protein is a protein that contains a non-peptide component, usually in stoichiometric proportion. COMe:PRX000001 chebi_ontology complex protein CHEBI:33837 conjugated protein CHEBI:33837 complex protein COMe A macromolecule is a molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. Wikipedia:Macromolecule chebi_ontology macromolecules polymer polymer molecule polymers CHEBI:33839 macromolecule CHEBI:33839 macromolecules ChEBI polymer ChEBI polymer molecule IUPAC polymers ChEBI Organic aromatic compounds having one or more hydroxy groups attached to a benzene or other arene ring. CHEBI:13664 CHEBI:13825 CHEBI:25969 CHEBI:2857 KEGG:C15584 MetaCyc:Phenols Wikipedia:Phenols chebi_ontology Aryl alcohol a phenol arenols CHEBI:33853 phenols CHEBI:33853 Aryl alcohol KEGG_COMPOUND a phenol UniProt arenols IUPAC A substance used in a chemical reaction to detect, measure, examine, or produce other substances. chebi_ontology reactif reactivo reagents CHEBI:33893 reagent CHEBI:33893 reactif IUPAC reactivo IUPAC reagents ChEBI Any nutrient required in large quantities by organisms throughout their life in order to orchestrate a range of physiological functions. Macronutrients are usually chemical elements (carbon, hydrogen, nitrogen, oxygen, phosphorus and sulfur) that humans consume in the largest quantities. Calcium, sodium, magnesium and potassium are sometimes included as macronutrients because they are required in relatively large quantities compared with other vitamins and minerals. chebi_ontology macronutrients CHEBI:33937 macronutrient CHEBI:33937 macronutrients ChEBI An ammonium ion that is the conjugate acid of serotonin; major species at pH 7.3. chebi_ontology serotonin serotonin cation CHEBI:350546 serotonin(1+) CHEBI:350546 serotonin UniProt serotonin cation ChEBI chebi_ontology nitrogen hydrides CHEBI:35106 nitrogen hydride CHEBI:35106 nitrogen hydrides ChEBI Saturated acyclic nitrogen hydrides having the general formula NnHn+2. chebi_ontology azanes CHEBI:35107 azane CHEBI:35107 azanes ChEBI A substance that diminishes the rate of a chemical reaction. chebi_ontology inhibidor inhibiteur inhibitors CHEBI:35222 inhibitor CHEBI:35222 inhibidor ChEBI inhibiteur ChEBI inhibitors ChEBI A substance that increases the rate of a reaction without modifying the overall standard Gibbs energy change in the reaction. chebi_ontology Katalysator catalizador catalyseur CHEBI:35223 catalyst CHEBI:35223 Katalysator ChEBI catalizador ChEBI catalyseur ChEBI The zwitterionic form of an amino acid having a negatively charged carboxyl group and a positively charged amino group. chebi_ontology amino acid zwitterion amino acid zwitterions amino-acid zwitterions CHEBI:35238 amino-acid zwitterion CHEBI:35238 amino acid zwitterion ChEBI amino acid zwitterions ChEBI amino-acid zwitterions ChEBI A derivative of ammonium, NH4(+), in which all four of the hydrogens bonded to nitrogen have been replaced with univalent (usually organyl) groups. CHEBI:26470 CHEBI:8693 KEGG:C06703 chebi_ontology Quaternary amine a quaternary ammonium quaternary ammonium ions CHEBI:35267 quaternary ammonium ion CHEBI:35267 Quaternary amine KEGG_COMPOUND a quaternary ammonium UniProt quaternary ammonium ions ChEBI A derivative of ammonium, NH4(+), in which one (or more) of the hydrogens bonded to the nitrogen have been replaced with univalent organyl groups. The substituting carbon of the organyl group must not itself be directly attached to a heteroatom (thereby excluding protonated amides, hemiaminals, etc). chebi_ontology ammonium ion derivatives azanium ion derivative azanium ion derivatives CHEBI:35274 ammonium ion derivative CHEBI:35274 ammonium ion derivatives ChEBI azanium ion derivative ChEBI azanium ion derivatives ChEBI A choline ester formed from choline and a carboxylic acid. CHEBI:13245 CHEBI:22227 CHEBI:2463 KEGG:C01777 chebi_ontology acylcholines an acylcholine CHEBI:35287 acylcholine CHEBI:35287 acylcholines ChEBI an acylcholine UniProt Any of naturally occurring compounds and synthetic analogues, based on the cyclopenta[a]phenanthrene carbon skeleton, partially or completely hydrogenated; there are usually methyl groups at C-10 and C-13, and often an alkyl group at C-17. By extension, one or more bond scissions, ring expansions and/or ring contractions of the skeleton may have occurred. Natural steroids are derived biogenetically from squalene which is a triterpene. CHEBI:13687 CHEBI:26768 CHEBI:9263 KEGG:C00377 MetaCyc:Steroids Steroid chebi_ontology a steroid CHEBI:35341 steroid CHEBI:35341 Steroid KEGG_COMPOUND a steroid UniProt Any heteroorganic entity containing at least one carbon-nitrogen bond. chebi_ontology organonitrogens CHEBI:35352 organonitrogen compound CHEBI:35352 organonitrogens ChEBI An oxoanion is an anion derived from an oxoacid by loss of hydron(s) bound to oxygen. CHEBI:33274 CHEBI:33436 oxoanion chebi_ontology oxoacid anions oxoanions CHEBI:35406 oxoanion CHEBI:35406 oxoanion ChEBI oxoacid anions ChEBI oxoanions ChEBI A substance that reduces or suppresses inflammation. chebi_ontology anti-inflammatory drugs antiinflammatory agent antiinflammatory drug antiinflammatory drugs CHEBI:35472 anti-inflammatory drug CHEBI:35472 anti-inflammatory drugs ChEBI antiinflammatory agent ChEBI antiinflammatory drug ChEBI antiinflammatory drugs ChEBI A drug that mimics the effects of stimulating postganglionic adrenergic sympathetic nerves. Included in this class are drugs that directly stimulate adrenergic receptors and drugs that act indirectly by provoking the release of adrenergic transmitters. chebi_ontology sympathomimetic sympathomimetics CHEBI:35524 sympathomimetic agent CHEBI:35524 sympathomimetic ChEBI sympathomimetics ChEBI A drug that affects the rate or intensity of cardiac contraction, blood vessel diameter or blood volume. chebi_ontology cardiovascular agent cardiovascular drugs CHEBI:35554 cardiovascular drug CHEBI:35554 cardiovascular agent ChEBI cardiovascular drugs ChEBI An agent that selectively binds to and activates alpha-adrenergic receptors. chebi_ontology alpha-adrenergic agonists alpha-adrenergic receptor agonist alpha-adrenoceptor agonists CHEBI:35569 alpha-adrenergic agonist CHEBI:35569 alpha-adrenergic agonists ChEBI alpha-adrenergic receptor agonist ChEBI alpha-adrenoceptor agonists IUPHAR chebi_ontology carbon oxoacids oxoacids of carbon CHEBI:35605 carbon oxoacid CHEBI:35605 carbon oxoacids ChEBI oxoacids of carbon ChEBI A drug used to cause dilation of the blood vessels. chebi_ontology vasodilator vasodilator agents CHEBI:35620 vasodilator agent CHEBI:35620 vasodilator ChEBI vasodilator agents ChEBI A compound formally derived from an oxoacid RkE(=O)l(OH)m (l > 0) and an alcohol, phenol, heteroarenol, or enol by linking with formal loss of water from an acidic hydroxy group of the former and a hydroxy group of the latter. CHEBI:23960 CHEBI:4859 KEGG:C00287 Wikipedia:Ester Ester chebi_ontology esters CHEBI:35701 ester CHEBI:35701 Ester KEGG_COMPOUND esters ChEBI chebi_ontology glycosaminoglycan sulfate glycosaminoglycan sulfates sulfated glycosaminoglycans CHEBI:35722 sulfated glycosaminoglycan CHEBI:35722 glycosaminoglycan sulfate ChEBI glycosaminoglycan sulfates ChEBI sulfated glycosaminoglycans ChEBI chebi_ontology carbohydrate sulfates carbohydrate sulphates CHEBI:35724 carbohydrate sulfate CHEBI:35724 carbohydrate sulfates ChEBI carbohydrate sulphates ChEBI A carboxylic acid anion formed when the carboxy group of a monocarboxylic acid is deprotonated. CHEBI:13657 CHEBI:25382 CHEBI:3407 KEGG:C00060 chebi_ontology Carboxylate Monocarboxylate a monocarboxylate monocarboxylates monocarboxylic acid anions CHEBI:35757 monocarboxylic acid anion CHEBI:35757 Carboxylate KEGG_COMPOUND Monocarboxylate KEGG_COMPOUND a monocarboxylate UniProt monocarboxylates ChEBI monocarboxylic acid anions ChEBI pnictogen hydride chebi_ontology pnictogen hydrides CHEBI:35881 pnictogen hydride CHEBI:35881 pnictogen hydride ChEBI pnictogen hydrides ChEBI A substance used for its pharmacological action on any aspect of neurotransmitter systems. Neurotransmitter agents include agonists, antagonists, degradation inhibitors, uptake inhibitors, depleters, precursors, and modulators of receptor function. chebi_ontology neurotransmitter agents CHEBI:35942 neurotransmitter agent CHEBI:35942 neurotransmitter agents ChEBI A biological macromolecule minimally consisting of one polypeptide chain synthesized at the ribosome. CHEBI:13677 CHEBI:14911 chebi_ontology CHEBI:36080 protein CHEBI:36080 Lepton is a fermion that does not experience the strong force (strong interaction). The term is derived from the Greek lambdaepsilonpitauomicronsigma (small, thin). chebi_ontology leptons CHEBI:36338 lepton CHEBI:36338 leptons ChEBI Baryon is a fermion that does experience the strong force (strong interaction). The term is derived from the Greek betaalpharhoupsilonsigma (heavy). chebi_ontology baryons CHEBI:36339 baryon CHEBI:36339 baryons ChEBI Particle of half-integer spin quantum number following Fermi-Dirac statistics. Fermions are named after Enrico Fermi. chebi_ontology fermions CHEBI:36340 fermion CHEBI:36340 fermions ChEBI Particle of integer spin quantum number following Bose-Einstein statistics. Bosons are named after Satyendra Nath Bose. chebi_ontology bosons CHEBI:36341 boson CHEBI:36341 bosons ChEBI A particle smaller than an atom. Wikipedia:Subatomic_particle chebi_ontology subatomic particles CHEBI:36342 subatomic particle CHEBI:36342 subatomic particles ChEBI A subatomic particle known to have substructure (i.e. consisting of smaller particles). chebi_ontology composite particles CHEBI:36343 composite particle CHEBI:36343 composite particles ChEBI Hadron is a subatomic particle which experiences the strong force. chebi_ontology hadrons CHEBI:36344 hadron CHEBI:36344 hadrons ChEBI A nucleus or any of its constituents in any of their energy states. chebi_ontology CHEBI:36347 nuclear particle CHEBI:36347 Any molecular entity consisting of more than one atom. chebi_ontology polyatomic entities CHEBI:36357 polyatomic entity CHEBI:36357 polyatomic entities ChEBI An ion consisting of more than one atom. chebi_ontology polyatomic ions CHEBI:36358 polyatomic ion CHEBI:36358 polyatomic ions ChEBI Any compound containing the carbonyl group, C=O. The term is commonly used in the restricted sense of aldehydes and ketones, although it actually includes carboxylic acids and derivatives. chebi_ontology CHEBI:36586 carbonyl compound CHEBI:36586 Organic compounds containing an oxygen atom, =O, doubly bonded to carbon or another element. chebi_ontology organic oxo compounds CHEBI:36587 organic oxo compound CHEBI:36587 organic oxo compounds ChEBI chalcogen hydride chebi_ontology chalcogen hydrides CHEBI:36902 chalcogen hydride CHEBI:36902 chalcogen hydride ChEBI chalcogen hydrides ChEBI chebi_ontology inorganic ions CHEBI:36914 inorganic ion CHEBI:36914 inorganic ions ChEBI chebi_ontology inorganic cations CHEBI:36915 inorganic cation CHEBI:36915 inorganic cations ChEBI A monoatomic or polyatomic species having one or more elementary charges of the proton. CHEBI:23058 CHEBI:3473 KEGG:C01373 Cation cation chebi_ontology Kation Kationen cationes cations CHEBI:36916 cation CHEBI:36916 Cation KEGG_COMPOUND cation ChEBI Kation ChEBI Kationen ChEBI cationes ChEBI cations ChEBI An organochalcogen compound is a compound containing at least one carbon-chalcogen bond. organochalcogen compound chebi_ontology organochalcogen compounds CHEBI:36962 organochalcogen compound CHEBI:36962 organochalcogen compound ChEBI organochalcogen compounds ChEBI An organochalcogen compound containing at least one carbon-oxygen bond. organooxygen compound chebi_ontology organooxygen compounds CHEBI:36963 organooxygen compound CHEBI:36963 organooxygen compound ChEBI organooxygen compounds ChEBI chebi_ontology amino acid anion amino acid anions amino-acid anions CHEBI:37022 amino-acid anion CHEBI:37022 amino acid anion ChEBI amino acid anions ChEBI amino-acid anions ChEBI chebi_ontology mononuclear hydride mononuclear hydrides CHEBI:37176 mononuclear parent hydride CHEBI:37176 mononuclear hydride ChEBI mononuclear hydrides IUPAC Any of the group of polysaccharides composed of alternating units from uronic acids and glycosamines, and commonly partially esterified with sulfuric acid. CHEBI:25425 CHEBI:7011 KEGG:C05114 Mucopolysaccharide chebi_ontology Mucopolysaccharid Mukopolysaccharid mucopolisacarido mucopolisacaridos CHEBI:37395 mucopolysaccharide CHEBI:37395 Mucopolysaccharide KEGG_COMPOUND Mucopolysaccharid ChEBI Mukopolysaccharid ChEBI mucopolisacarido ChEBI mucopolisacaridos IUPAC An acid is a molecular entity capable of donating a hydron (Bronsted acid) or capable of forming a covalent bond with an electron pair (Lewis acid). CHEBI:13800 CHEBI:13801 CHEBI:22209 CHEBI:2426 KEGG:C00174 Acid chebi_ontology Saeure Saeuren acide acido acids CHEBI:37527 acid CHEBI:37527 Acid KEGG_COMPOUND Saeure ChEBI Saeuren ChEBI acide IUPAC acido ChEBI acids ChEBI A molecular entity consisting of two or more chemical elements. chebi_ontology chemical compound heteroatomic molecular entities CHEBI:37577 heteroatomic molecular entity CHEBI:37577 chemical compound ChEBI heteroatomic molecular entities ChEBI An amide of a carboxylic acid, having the structure RC(=O)NR2. The term is used as a suffix in systematic name formation to denote the -C(=O)NH2 group including its carbon atom. CHEBI:35354 CHEBI:35355 chebi_ontology carboxamides primary carboxamide CHEBI:37622 carboxamide CHEBI:37622 carboxamides ChEBI primary carboxamide ChEBI sulfuric acid derivative chebi_ontology sulfuric acid derivatives CHEBI:37826 sulfuric acid derivative CHEBI:37826 sulfuric acid derivative ChEBI sulfuric acid derivatives ChEBI A carboacyl group is a group formed by loss of at least one OH from the carboxy group of a carboxylic acid. chebi_ontology carboxylic acyl groups CHEBI:37838 carboacyl group CHEBI:37838 carboxylic acyl groups IUPAC An agent that selectively binds to and activates adrenergic receptors. chebi_ontology adrenergic agonists adrenergic receptor agonist adrenoceptor agonists adrenomimetic adrenomimetics CHEBI:37886 adrenergic agonist CHEBI:37886 adrenergic agonists ChEBI adrenergic receptor agonist ChEBI adrenoceptor agonists IUPHAR adrenomimetic ChEBI adrenomimetics ChEBI Any agent that acts on an adrenergic receptor or affects the life cycle of an adrenergic transmitter. chebi_ontology adrenergic agents adrenergic drug adrenergic drugs adrenergic neuron agents adrenergics CHEBI:37962 adrenergic agent CHEBI:37962 adrenergic agents ChEBI adrenergic drug ChEBI adrenergic drugs ChEBI adrenergic neuron agents ChEBI adrenergics ChEBI Any organonitrogen compound containing a cyclic component with nitrogen and at least one other element as ring member atoms. chebi_ontology heterocyclic organonitrogen compounds organonitrogen heterocyclic compounds CHEBI:38101 organonitrogen heterocyclic compound CHEBI:38101 heterocyclic organonitrogen compounds ChEBI organonitrogen heterocyclic compounds ChEBI CHEBI:25429 CHEBI:38075 chebi_ontology organic heteropolycyclic compounds CHEBI:38166 organic heteropolycyclic compound CHEBI:38166 organic heteropolycyclic compounds ChEBI chebi_ontology polycyclic heteroarenes CHEBI:38180 polycyclic heteroarene CHEBI:38180 polycyclic heteroarenes ChEBI Any drug used for its actions on cholinergic systems. Included here are agonists and antagonists, drugs that affect the life cycle of acetylcholine, and drugs that affect the survival of cholinergic neurons. chebi_ontology cholinergic agent cholinergic drugs cholinomimetic CHEBI:38323 cholinergic drug CHEBI:38323 cholinergic agent ChEBI cholinergic drugs ChEBI cholinomimetic ChEBI Any drug that binds to and activates cholinergic receptors. chebi_ontology acetylcholine agonist acetylcholine agonists acetylcholine receptor agonist cholinergic agonists cholinomimetic cholinomimetics CHEBI:38324 cholinergic agonist CHEBI:38324 acetylcholine agonist ChEBI acetylcholine agonists ChEBI acetylcholine receptor agonist IUPHAR cholinergic agonists ChEBI cholinomimetic ChEBI cholinomimetics ChEBI Any drug that binds to and activates a muscarinic cholinergic receptor. chebi_ontology muscarinic acetylcholine receptor agonist muscarinic agonists muscarinic cholinergic agonist muscarinic cholinergic agonists CHEBI:38325 muscarinic agonist CHEBI:38325 muscarinic acetylcholine receptor agonist ChEBI muscarinic agonists ChEBI muscarinic cholinergic agonist ChEBI muscarinic cholinergic agonists ChEBI CHEBI:22503 CHEBI:24792 chebi_ontology aminoalkylindoles CHEBI:38631 aminoalkylindole CHEBI:38631 aminoalkylindoles ChEBI An alkaloid containing an indole skeleton. CHEBI:24795 CHEBI:5901 KEGG:C06073 Wikipedia:Indole_alkaloid Indole alkaloid chebi_ontology indole alkaloids CHEBI:38958 indole alkaloid CHEBI:38958 Indole alkaloid KEGG_COMPOUND indole alkaloids ChEBI A molecular entity capable of donating a hydron to an acceptor (Bronsted base). chebi_ontology Bronsted-Saeure acide de Bronsted donneur d'hydron hydron donor CHEBI:39141 Bronsted acid CHEBI:39141 Bronsted-Saeure ChEBI acide de Bronsted IUPAC donneur d'hydron IUPAC hydron donor IUPAC A molecular entity capable of accepting a hydron from a donor (Bronsted acid). chebi_ontology Bronsted-Base accepteur d'hydron base de Bronsted hydron acceptor CHEBI:39142 Bronsted base CHEBI:39142 Bronsted-Base ChEBI accepteur d'hydron IUPAC base de Bronsted IUPAC hydron acceptor IUPAC A molecular entity able to provide a pair of electrons and thus capable of forming a covalent bond with an electron-pair acceptor (Lewis acid), thereby producing a Lewis adduct. chebi_ontology Lewis-Base base de Lewis donneur d'une paire d'electrons electron donor CHEBI:39144 Lewis base CHEBI:39144 Lewis-Base ChEBI base de Lewis IUPAC donneur d'une paire d'electrons ChEBI electron donor ChEBI CHEBI:24706 CHEBI:43171 PDBeChem:OH HYDROXY GROUP hydroxy group chebi_ontology -OH hydroxyl hydroxyl group CHEBI:43176 hydroxy group CHEBI:43176 HYDROXY GROUP PDBeChem hydroxy group UniProt -OH IUPAC hydroxyl ChEBI hydroxyl group ChEBI CHEBI:29199 CHEBI:45693 hydrogensulfate chebi_ontology HSO4(-) HYDROGEN SULFATE [SO3(OH)](-) CHEBI:45696 hydrogensulfate CHEBI:45696 hydrogensulfate IUPAC HSO4(-) IUPAC HYDROGEN SULFATE PDBeChem [SO3(OH)](-) IUPAC CHEBI:29353 CHEBI:44607 PDBeChem:O OXO GROUP chebi_ontology =O CHEBI:46629 oxo group CHEBI:46629 OXO GROUP PDBeChem =O IUPAC In general, a mineral is a chemical substance that is normally crystalline formed and has been formed as a result of geological processes. The term also includes metamict substances (naturally occurring, formerly crystalline substances whose crystallinity has been destroyed by ionising radiation) and can include naturally occurring amorphous substances that have never been crystalline ('mineraloids') such as georgite and calciouranoite as well as substances formed by the action of geological processes on bigenic compounds ('biogenic minerals'). Wikipedia:Mineral mineral chebi_ontology Minerale minerales minerals mineraux CHEBI:46662 mineral CHEBI:46662 mineral ChEBI Minerale ChEBI minerales ChEBI minerals ChEBI mineraux ChEBI chebi_ontology phosphate minerals CHEBI:46723 phosphate mineral CHEBI:46723 phosphate minerals ChEBI A liquid that can dissolve other substances (solutes) without any change in their chemical composition. Wikipedia:Solvent chebi_ontology Loesungsmittel solvant solvents CHEBI:46787 solvent CHEBI:46787 Loesungsmittel ChEBI solvant ChEBI solvents ChEBI CHEBI:23025 CHEBI:41420 PDBeChem:FMT CARBOXY GROUP chebi_ontology -C(O)OH -CO2H -COOH carboxyl group CHEBI:46883 carboxy group CHEBI:46883 CARBOXY GROUP PDBeChem -C(O)OH IUPAC -CO2H ChEBI -COOH IUPAC carboxyl group ChEBI Any carboxylic ester where the carboxylic acid component is acetic acid. CHEBI:13244 CHEBI:13799 CHEBI:22189 CHEBI:2406 KEGG:C01883 Wikipedia:Acetate#Esters chebi_ontology Acetic ester Acetyl ester acetate acetate esters acetates acetyl esters an acetyl ester CHEBI:47622 acetate ester CHEBI:47622 Acetic ester KEGG_COMPOUND Acetyl ester KEGG_COMPOUND acetate ChEBI acetate esters ChEBI acetates ChEBI acetyl esters ChEBI an acetyl ester UniProt chebi_ontology Schwefeloxide oxides of sulfur sulfur oxides CHEBI:48154 sulfur oxide CHEBI:48154 Schwefeloxide ChEBI oxides of sulfur ChEBI sulfur oxides ChEBI A solvent that is composed of polar molecules. Polar solvents can dissolve ionic compounds or ionisable covalent compounds. chebi_ontology polar solvents CHEBI:48354 polar solvent CHEBI:48354 polar solvents ChEBI A polar solvent that is capable of acting as a hydron (proton) donor. chebi_ontology CHEBI:48356 protic solvent CHEBI:48356 Any drug that acts on an alpha-adrenergic receptor. chebi_ontology alpha-adrenergic drugs CHEBI:48539 alpha-adrenergic drug CHEBI:48539 alpha-adrenergic drugs ChEBI Substance which binds to cell receptors normally responding to naturally occurring substances and which produces a response of its own. chebi_ontology agonista agoniste agonists CHEBI:48705 agonist CHEBI:48705 agonista ChEBI agoniste ChEBI agonists ChEBI CHEBI:24634 CHEBI:49636 WebElements:H chebi_ontology 1H H Wasserstoff hidrogeno hydrogen hydrogene CHEBI:49637 hydrogen atom CHEBI:49637 1H IUPAC H IUPAC Wasserstoff ChEBI hidrogeno ChEBI hydrogen ChEBI hydrogene ChEBI A compound formally derived from ammonia by replacing one, two or three hydrogen atoms by organyl groups. chebi_ontology organic amino compounds CHEBI:50047 organic amino compound CHEBI:50047 organic amino compounds ChEBI chebi_ontology canonical nucleotide residues CHEBI:50297 canonical nucleotide residue CHEBI:50297 canonical nucleotide residues ChEBI chebi_ontology canonical ribonucleotide residues CHEBI:50299 canonical ribonucleotide residue CHEBI:50299 canonical ribonucleotide residues ChEBI chebi_ontology CHEBI:50312 onium compound CHEBI:50312 Mononuclear cations derived by addition of a hydron to a mononuclear parent hydride of the pnictogen, chalcogen and halogen families. chebi_ontology onium cations onium ion onium ions CHEBI:50313 onium cation CHEBI:50313 onium cations ChEBI onium ion ChEBI onium ions ChEBI chebi_ontology nucleotide residues CHEBI:50319 nucleotide residue CHEBI:50319 nucleotide residues ChEBI chebi_ontology nucleoside residues CHEBI:50320 nucleoside residue CHEBI:50320 nucleoside residues ChEBI Drug used to cause constriction of the blood vessels. chebi_ontology CHEBI:50514 vasoconstrictor agent CHEBI:50514 Any molecular entity that contains carbon. CHEBI:25700 CHEBI:33244 chebi_ontology organic compounds organic entity organic molecular entities CHEBI:50860 organic molecular entity CHEBI:50860 organic compounds ChEBI organic entity ChEBI organic molecular entities ChEBI A role is particular behaviour which a material entity may exhibit. chebi_ontology CHEBI:50906 role CHEBI:50906 A poison that interferes with the functions of the nervous system. CHEBI:50911 Wikipedia:Neurotoxin chebi_ontology agente neurotoxico nerve poison nerve poisons neurotoxic agent neurotoxic agents neurotoxicant neurotoxins CHEBI:50910 neurotoxin CHEBI:50910 agente neurotoxico ChEBI nerve poison ChEBI nerve poisons ChEBI neurotoxic agent ChEBI neurotoxic agents ChEBI neurotoxicant ChEBI neurotoxins ChEBI A compound formally derived from ammonia by replacing one hydrogen atom by an organyl group. chebi_ontology primary amino compounds CHEBI:50994 primary amino compound CHEBI:50994 primary amino compounds ChEBI A role played by the molecular entity or part thereof within a chemical context. chebi_ontology CHEBI:51086 chemical role CHEBI:51086 CHEBI:25556 CHEBI:7594 KEGG:C06061 chebi_ontology Nitrogenous compounds nitrogen compounds nitrogen molecular entities CHEBI:51143 nitrogen molecular entity CHEBI:51143 Nitrogenous compounds KEGG_COMPOUND nitrogen compounds ChEBI nitrogen molecular entities ChEBI An organic molecule that is electrically neutral carrying a positive and a negative charge in one of its major canonical descriptions. In most dipolar compounds the charges are delocalized; however the term is also applied to species where this is not the case. chebi_ontology dipolar compounds CHEBI:51151 dipolar compound CHEBI:51151 dipolar compounds ChEBI Any organic substituent group, regardless of functional type, having two free valences at carbon atom(s). chebi_ontology organodiyl groups CHEBI:51422 organodiyl group CHEBI:51422 organodiyl groups ChEBI chebi_ontology CHEBI:51446 organic divalent group CHEBI:51446 chebi_ontology CHEBI:51447 organic univalent group CHEBI:51447 chebi_ontology organic polycyclic compounds CHEBI:51958 organic polycyclic compound CHEBI:51958 organic polycyclic compounds ChEBI A biological role played by the molecular entity or part thereof within a biochemical context. chebi_ontology CHEBI:52206 biochemical role CHEBI:52206 A role played by the molecular entity or part thereof which causes the development of a pathological process. chebi_ontology etiopathogenetic agent etiopathogenetic role CHEBI:52209 aetiopathogenetic role CHEBI:52209 etiopathogenetic agent ChEBI etiopathogenetic role ChEBI A biological role which describes how a drug interacts within a biological system and how the interactions affect its medicinal properties. chebi_ontology CHEBI:52210 pharmacological role CHEBI:52210 chebi_ontology CHEBI:52211 physiological role CHEBI:52211 Any substance introduced into a living organism with therapeutic or diagnostic purpose. CHEBI:33293 CHEBI:33294 chebi_ontology farmaco medicament pharmaceuticals CHEBI:52217 pharmaceutical CHEBI:52217 farmaco ChEBI medicament ChEBI pharmaceuticals ChEBI A phosphate mineral with the general formula Ca5(PO4)3X where X = OH, F or Cl. HMDB:HMDB0033610 chebi_ontology hydroxyapatite CHEBI:52254 apatite CHEBI:52254 hydroxyapatite ChEBI A phosphate mineral with the formula Ca5(PO4)3(OH). chebi_ontology CHEBI:52255 hydroxylapatite CHEBI:52255 An organic group that consists of a closed ring. It may be a substituent or a skeleton. chebi_ontology cyclic organic groups CHEBI:52845 cyclic organic group CHEBI:52845 cyclic organic groups ChEBI A polymer carrying multiple negative charges. chebi_ontology polyanion polyanions CHEBI:53309 polyanionic macromolecule CHEBI:53309 polyanion ChEBI polyanions SUBMITTER A macromolecule containing ionic groups. chebi_ontology ionic polymer polyionic macromolecule CHEBI:53368 ionic macromolecule CHEBI:53368 ionic polymer ChEBI polyionic macromolecule ChEBI A 29-amino acid peptide hormone consisting of His, Ser, Gln, Gly, Thr, Phe, Thr, Ser, Asp, Tyr, Ser, Lys, Tyr, Leu, Asp, Ser, Arg, Arg, Ala, Gln, Asp, Phe, Val, Gln, Trp, Leu, Met, Asn and Thr residues joined in sequence. DrugBank:DB00040 KEGG:C01501 KEGG:D00116 Wikipedia:Glucagon Glucagon chebi_ontology Glucagone HSQGTFTSDYSKYLDSRRAQDFVQWLMNT His-Ser-Gln-Gly-Thr-Phe-Thr-Ser-Asp-Tyr-Ser-Lys-Tyr-Leu-Asp-Ser-Arg-Arg-Ala-Gln-Asp-Phe-Val-Gln-Trp-Leu-Met-Asn-Thr His-ser-glu(nh2)-gly-thr-phe-thr-ser-asp-tyr-ser-lys-tyr-leu-asp-ser-arg-arg-ala-glu(NH2)-asp-phe-val-glu(NH2)-trp-leu-met-asp(NH2)-thr CHEBI:5391 glucagon CHEBI:5391 Glucagon KEGG_COMPOUND Glucagone ChemIDplus HSQGTFTSDYSKYLDSRRAQDFVQWLMNT ChEBI His-Ser-Gln-Gly-Thr-Phe-Thr-Ser-Asp-Tyr-Ser-Lys-Tyr-Leu-Asp-Ser-Arg-Arg-Ala-Gln-Asp-Phe-Val-Gln-Trp-Leu-Met-Asn-Thr ChEBI His-ser-glu(nh2)-gly-thr-phe-thr-ser-asp-tyr-ser-lys-tyr-leu-asp-ser-arg-arg-ala-glu(NH2)-asp-phe-val-glu(NH2)-trp-leu-met-asp(NH2)-thr ChemIDplus A cyclic compound having as ring members atoms of at least two different elements. Heterocyclic compound chebi_ontology compuesto heterociclico compuestos heterociclicos heterocycle heterocyclic compounds CHEBI:5686 heterocyclic compound CHEBI:5686 Heterocyclic compound KEGG_COMPOUND compuesto heterociclico IUPAC compuestos heterociclicos IUPAC heterocycle ChEBI heterocyclic compounds ChEBI An ammonium ion that is the conjugate acid of tryptamine arising from protonation of the primary amino group; major species at pH 7.3. chebi_ontology tryptamine tryptaminium cation tryptaminium(1+) CHEBI:57887 tryptaminium CHEBI:57887 tryptamine UniProt tryptaminium cation ChEBI tryptaminium(1+) ChEBI An amino-acid residue protonated on nitrogen. chebi_ontology amino acid cation residue amino acid cation residues amino-acid cation residue amino-acid cation residues cationic amino acid residue cationic amino acid residues cationic amino-acid residues CHEBI:58942 cationic amino-acid residue CHEBI:58942 amino acid cation residue ChEBI amino acid cation residues ChEBI amino-acid cation residue ChEBI amino-acid cation residues ChEBI cationic amino acid residue ChEBI cationic amino acid residues ChEBI cationic amino-acid residues ChEBI An organic anion of general formula RS(=O)2O(-) where R is an organyl group. chebi_ontology organosulfate oxoanions CHEBI:58958 organosulfate oxoanion CHEBI:58958 organosulfate oxoanions ChEBI A reagent that forms a bond to its reaction partner (the electrophile) by donating both bonding electrons. chebi_ontology nucleophile nucleophiles nucleophilic reagents CHEBI:59740 nucleophilic reagent CHEBI:59740 nucleophile ChEBI nucleophiles ChEBI nucleophilic reagents ChEBI A chemical substance is a portion of matter of constant composition, composed of molecular entities of the same type or of different types. chebi_ontology Chemische Substanz CHEBI:59999 chemical substance CHEBI:59999 Chemische Substanz ChEBI A mixture is a chemical substance composed of multiple molecules, at least two of which are of a different kind. chebi_ontology Mischung CHEBI:60004 mixture CHEBI:60004 Mischung ChEBI A polymer is a mixture, which is composed of macromolecules of different kinds and which may be differentiated by composition, length, degree of branching etc.. Wikipedia:Polymer Polymer chebi_ontology Kunststoff CHEBI:60027 polymer CHEBI:60027 Polymer ChEBI Kunststoff ChEBI An ionic polymer is a polymer, composed of ionic macromolecules. chebi_ontology polyionic polymer CHEBI:60164 ionic polymer CHEBI:60164 polyionic polymer ChEBI An atom or small molecule with a positive charge that does not contain carbon in covalent linkage, with a valency of one. chebi_ontology a monovalent cation CHEBI:60242 monovalent inorganic cation CHEBI:60242 a monovalent cation UniProt Zwitterionic form of any peptide where, in general, the amino terminus is positively charged and the carboxy terminus is negatively charged. chebi_ontology a peptide peptide zwitterions CHEBI:60466 peptide zwitterion CHEBI:60466 a peptide UniProt peptide zwitterions ChEBI Any compound that has a nucleobase as a part. chebi_ontology nucleobase-containing compound nucleobase-containing compounds nucleobase-containing molecular entities CHEBI:61120 nucleobase-containing molecular entity CHEBI:61120 nucleobase-containing compound SUBMITTER nucleobase-containing compounds ChEBI nucleobase-containing molecular entities ChEBI A polymer, composed of polyanion macromolecules. chebi_ontology polyanion polyanions CHEBI:61469 polyanionic polymer CHEBI:61469 polyanion ChEBI polyanions ChEBI A substance that removes electrons from another reactant in a redox reaction. chebi_ontology oxidant oxidants oxidiser oxidisers oxidising agents oxidizer oxidizers oxidizing agent oxidizing agents CHEBI:63248 oxidising agent CHEBI:63248 oxidant ChEBI oxidants ChEBI oxidiser ChEBI oxidisers ChEBI oxidising agents ChEBI oxidizer ChEBI oxidizers ChEBI oxidizing agent ChEBI oxidizing agents ChEBI Any organooxygen compound derived from a carbohydrate by replacement of one or more hydroxy group(s) by an amino group, a thiol group or similar heteroatomic groups. The term also includes derivatives of these compounds. chebi_ontology carbohydrate derivatives derivatised carbohydrate derivatised carbohydrates derivatized carbohydrate derivatized carbohydrates CHEBI:63299 carbohydrate derivative CHEBI:63299 carbohydrate derivatives ChEBI derivatised carbohydrate ChEBI derivatised carbohydrates ChEBI derivatized carbohydrate ChEBI derivatized carbohydrates ChEBI A carbohydrate derivative that is formally obtained from a carbohydrate acid. chebi_ontology carbohydrate acid derivatives CHEBI:63436 carbohydrate acid derivative CHEBI:63436 carbohydrate acid derivatives ChEBI An aralylamino compound which contains one amino group connected to an aromatic ring by a two-carbon chain. Monoamines are derived from aromatic amino acids like phenylalanine, tyrosine, tryptophan, and the thyroid hormones by the action of aromatic amino acid decarboxylase enzymes. chebi_ontology monoamines naturally occurring monoamine naturally occurring monoamines CHEBI:63534 monoamine CHEBI:63534 monoamines ChEBI naturally occurring monoamine ChEBI naturally occurring monoamines ChEBI A carboxylic acid anion resulting from the deprotonation of the carboxy group of a carbohydrate acid derivative. chebi_ontology carbohydrate acid anion derivative carbohydrate acid anion derivatives carbohydrate acid derivative anions CHEBI:63551 carbohydrate acid derivative anion CHEBI:63551 carbohydrate acid anion derivative ChEBI carbohydrate acid anion derivatives ChEBI carbohydrate acid derivative anions ChEBI Any substance which is added to food to preserve or enhance its flavour and/or appearance. Wikipedia:Food_additive chebi_ontology food additives CHEBI:64047 food additive CHEBI:64047 food additives ChEBI A food additive that is used to change or otherwise control the acidity or alkalinity of foods. They may be acids, bases, neutralising agents or buffering agents. Wikipedia:Acidity_regulator chebi_ontology acidity regulator acidity regulators food acidity regulators pH control agent pH control agents CHEBI:64049 food acidity regulator CHEBI:64049 acidity regulator ChEBI acidity regulators ChEBI food acidity regulators ChEBI pH control agent ChEBI pH control agents ChEBI An organic amino compound in which an aminoalkyl group is linked to an arene. chebi_ontology aralkylamino compounds CHEBI:64365 aralkylamino compound CHEBI:64365 aralkylamino compounds ChEBI A fourteen-membered heterodetic cyclic peptide comprising the sequence Ala-Gly-Cys-Lys-Asn-Phe-Phe-Trp-Lys-Thr-Phe-Thr-Ser-Cys cyclised by a disulfide bridge between the two Cys residues at positions 3 and 14. HMDB:HMDB0013072 KEGG:C16022 KEGG:D07431 LINCS:LSM-5326 Wikipedia:Somatostatin chebi_ontology Ala-Gly-cyclo-[Cys-Lys-Asn-Phe-Phe-Trp-Lys-Thr-Phe-Thr-Ser-Cys] L-alanylglycyl-L-cysteinyl-L-lysyl-L-asparaginyl-L-phenylalanyl-L-phenylalanyl-L-tryptophyl-L-lysyl-L-threonyl-L-phenylalanyl-L-threonyl-L-seryl-L-cysteine cyclic (3-14) disulfide Somatostatin-1 Somatostatin-14 Synthetic growth hormone release-inhibiting hormone CHEBI:64628 somatostatin CHEBI:64628 Ala-Gly-cyclo-[Cys-Lys-Asn-Phe-Phe-Trp-Lys-Thr-Phe-Thr-Ser-Cys] ChEBI L-alanylglycyl-L-cysteinyl-L-lysyl-L-asparaginyl-L-phenylalanyl-L-phenylalanyl-L-tryptophyl-L-lysyl-L-threonyl-L-phenylalanyl-L-threonyl-L-seryl-L-cysteine cyclic (3-14) disulfide ChemIDplus Somatostatin-1 KEGG_COMPOUND Somatostatin-14 KEGG_COMPOUND Synthetic growth hormone release-inhibiting hormone ChemIDplus An organic molecular entity containing a single carbon atom (C1). chebi_ontology one-carbon compounds CHEBI:64708 one-carbon compound CHEBI:64708 one-carbon compounds ChEBI Any organic molecular entity that is acidic and contains carbon in covalent linkage. chebi_ontology organic acids CHEBI:64709 organic acid CHEBI:64709 organic acids ChEBI A group that carries an overall positive charge. chebi_ontology cationic groups CHEBI:64766 cationic group CHEBI:64766 cationic groups ChEBI A group that carries an overall negative charge. chebi_ontology anionic groups CHEBI:64767 anionic group CHEBI:64767 anionic groups ChEBI A cationic group that contains carbon. chebi_ontology organic cationic groups CHEBI:64769 organic cationic group CHEBI:64769 organic cationic groups ChEBI An anionic group that contains carbon. chebi_ontology organic anionic groups CHEBI:64775 organic anionic group CHEBI:64775 organic anionic groups ChEBI An amino-acid residue carrying an overall negative charge. chebi_ontology amino acid anion residue amino acid anion residues amino-acid anion residue amino-acid anion residues anionic amino acid residue anionic amino acid residues CHEBI:64898 anionic amino-acid residue CHEBI:64898 amino acid anion residue ChEBI amino acid anion residues ChEBI amino-acid anion residue ChEBI amino-acid anion residues ChEBI anionic amino acid residue ChEBI anionic amino acid residues ChEBI Any substance that causes disturbance to organisms by chemical reaction or other activity on the molecular scale, when a sufficient quantity is absorbed by the organism. Wikipedia:Poison chebi_ontology poisonous agent poisonous agents poisonous substance poisonous substances poisons toxic agent toxic agents toxic substance toxic substances CHEBI:64909 poison CHEBI:64909 poisonous agent ChEBI poisonous agents ChEBI poisonous substance ChEBI poisonous substances ChEBI poisons ChEBI toxic agent ChEBI toxic agents ChEBI toxic substance ChEBI toxic substances ChEBI A carbohydrate derivative that is any derivative of a polysaccharide. chebi_ontology polysaccharide derivatives CHEBI:65212 polysaccharide derivative CHEBI:65212 polysaccharide derivatives ChEBI Substances which are added to food in order to prevent decomposition caused by microbial growth or by undesirable chemical changes. chebi_ontology food preservatives CHEBI:65255 food preservative CHEBI:65255 food preservatives ChEBI A food preservative which prevents decomposition of food by preventing the growth of fungi or bacteria. In European countries, E-numbers for permitted food preservatives are from E200 to E299, divided into sorbates (E200-209), benzoates (E210-219), sulfites (E220-229), phenols and formates (E230-239), nitrates (E240-259), acetates (E260-269), lactates (E270-279), propionates (E280-289) and others (E290-299). chebi_ontology antimicrobial food preservatives antimicrobial preservative antimicrobial preservatives CHEBI:65256 antimicrobial food preservative CHEBI:65256 antimicrobial food preservatives ChEBI antimicrobial preservative ChEBI antimicrobial preservatives ChEBI An ammonium ion derivative resulting from the protonation of the nitrogen atom of a primary amino compound. Major species at pH 7.3. chebi_ontology a primary amine substituted ammonium CHEBI:65296 primary ammonium ion CHEBI:65296 a primary amine UniProt substituted ammonium ChEBI Any compound that has anti-inflammatory effects. chebi_ontology anti-inflammatory agents antiinflammatory agent antiinflammatory agents CHEBI:67079 anti-inflammatory agent CHEBI:67079 anti-inflammatory agents ChEBI antiinflammatory agent ChEBI antiinflammatory agents ChEBI An organic cation that is the conjugate acid of (R)-noradrenaline, obtained by protonation of the priamry amino group; major species at pH 7.3. PDBeChem:E5E chebi_ontology (R)-noradrenaline (R)-noradrenaline cation (R)-noradrenalinium cation (R)-noradrenalinium(1+) CHEBI:72587 (R)-noradrenaline(1+) CHEBI:72587 (R)-noradrenaline UniProt (R)-noradrenaline cation ChEBI (R)-noradrenalinium cation ChEBI (R)-noradrenalinium(1+) ChEBI Any molecule that consists of at least one carbon atom as part of the electrically neutral entity. chebi_ontology organic compound organic compounds organic molecules CHEBI:72695 organic molecule CHEBI:72695 organic compound ChEBI organic compounds ChEBI organic molecules ChEBI A biomacromolecule composed of carbohydrate residues which is secreted by a microorganism into the surrounding environment. MetaCyc:Exopolysaccharides Wikipedia:Exopolysaccharide Wikipedia:Extracellular_polymeric_substance chebi_ontology exopolysaccharides extracellular polymeric substance extracellular polymeric substances CHEBI:72813 exopolysaccharide CHEBI:72813 exopolysaccharides ChEBI extracellular polymeric substance ChEBI extracellular polymeric substances ChEBI A mancude heterobicyclic organic group consisting of a benzene ring fused to a pyrrole ring. chebi_ontology CHEBI:73398 indole skeleton CHEBI:73398 A bicyclic organic group that contains both carbon and hetero atoms. chebi_ontology organic heterobicyclic rings CHEBI:73541 organic heterobicyclic ring CHEBI:73541 organic heterobicyclic rings ChEBI Any metabolite produced during a metabolic reaction in eukaryotes, the taxon that include members of the fungi, plantae and animalia kingdoms. chebi_ontology eukaryotic metabolites CHEBI:75763 eukaryotic metabolite CHEBI:75763 eukaryotic metabolites ChEBI Any eukaryotic metabolite produced during a metabolic reaction in animals that include diverse creatures from sponges, insects to mammals. CHEBI:77721 CHEBI:77743 chebi_ontology animal metabolites CHEBI:75767 animal metabolite CHEBI:75767 animal metabolites ChEBI Any animal metabolite produced during a metabolic reaction in mammals. CHEBI:77464 CHEBI:77744 chebi_ontology mammalian metabolites CHEBI:75768 mammalian metabolite CHEBI:75768 mammalian metabolites ChEBI Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus). chebi_ontology Mus musculus metabolite Mus musculus metabolites mouse metabolites CHEBI:75771 mouse metabolite CHEBI:75771 Mus musculus metabolite ChEBI Mus musculus metabolites ChEBI mouse metabolites ChEBI Any fungal metabolite produced during a metabolic reaction in Baker's yeast (Saccharomyces cerevisiae). CHEBI:76949 CHEBI:76951 chebi_ontology S. cerevisiae metabolite S. cerevisiae metabolites S. cerevisiae secondary metabolite S. cerevisiae secondary metabolites Saccharomyces cerevisiae metabolites Saccharomyces cerevisiae secondary metabolites baker's yeast metabolite baker's yeast metabolites baker's yeast secondary metabolite baker's yeast secondary metabolites CHEBI:75772 Saccharomyces cerevisiae metabolite CHEBI:75772 S. cerevisiae metabolite ChEBI S. cerevisiae metabolites ChEBI S. cerevisiae secondary metabolite ChEBI S. cerevisiae secondary metabolites ChEBI Saccharomyces cerevisiae metabolites ChEBI Saccharomyces cerevisiae secondary metabolites ChEBI baker's yeast metabolite ChEBI baker's yeast metabolites ChEBI baker's yeast secondary metabolite ChEBI baker's yeast secondary metabolites ChEBI Any metabolite produced during a metabolic reaction in prokaryotes, the taxon that include members of domains such as the bacteria and archaea. chebi_ontology prokaryotic metabolites CHEBI:75787 prokaryotic metabolite CHEBI:75787 prokaryotic metabolites ChEBI Any metabolite produced by metabolism of a xenobiotic compound. chebi_ontology xenobiotic metabolites CHEBI:76206 xenobiotic metabolite CHEBI:76206 xenobiotic metabolites ChEBI Any enzyme inhibitor that interferes with the action of a hydrolase (EC 3.*.*.*). Wikipedia:Hydrolase chebi_ontology EC 3.* (hydrolase) inhibitors EC 3.* inhibitor EC 3.* inhibitors EC 3.*.*.* inhibitor EC 3.*.*.* inhibitors hydrolase (EC 3.*) inhibitor hydrolase (EC 3.*) inhibitors hydrolase inhibitor hydrolase inhibitors CHEBI:76759 EC 3.* (hydrolase) inhibitor CHEBI:76759 EC 3.* (hydrolase) inhibitors ChEBI EC 3.* inhibitor ChEBI EC 3.* inhibitors ChEBI EC 3.*.*.* inhibitor ChEBI EC 3.*.*.* inhibitors ChEBI hydrolase (EC 3.*) inhibitor ChEBI hydrolase (EC 3.*) inhibitors ChEBI hydrolase inhibitor ChEBI hydrolase inhibitors ChEBI Any hydrolase inhibitor that interferes with the action of a hydrolase acting on C-N bonds, other than peptide bonds (EC 3.5.*.*). chebi_ontology EC 3.5.* (hydrolase acting on non-peptide C-N bond) inhibitor EC 3.5.* (hydrolase acting on non-peptide C-N bond) inhibitors EC 3.5.* (hydrolases acting on C-N bonds, other than peptide bonds) inhibitor EC 3.5.* (hydrolases acting on C-N bonds, other than peptide bonds) inhibitors EC 3.5.* (hydrolases acting on non-peptide C-N bonds) inhibitors EC 3.5.* inhibitor EC 3.5.* inhibitors CHEBI:76764 EC 3.5.* (hydrolases acting on non-peptide C-N bonds) inhibitor CHEBI:76764 EC 3.5.* (hydrolase acting on non-peptide C-N bond) inhibitor ChEBI EC 3.5.* (hydrolase acting on non-peptide C-N bond) inhibitors ChEBI EC 3.5.* (hydrolases acting on C-N bonds, other than peptide bonds) inhibitor ChEBI EC 3.5.* (hydrolases acting on C-N bonds, other than peptide bonds) inhibitors ChEBI EC 3.5.* (hydrolases acting on non-peptide C-N bonds) inhibitors ChEBI EC 3.5.* inhibitor ChEBI EC 3.5.* inhibitors ChEBI An EC 3.5.* (hydrolases acting on non-peptide C-N bonds) inhibitor that interferes with the action of any non-peptide linear amide C-N hydrolase (EC 3.5.1.*). chebi_ontology EC 3.5.1.* (non-peptide linear amide C-N hydrolase) inhibitors EC 3.5.1.* inhibitor EC 3.5.1.* inhibitors non-peptide linear amide C-N hydrolase (EC 3.5.1.*) inhibitor non-peptide linear amide C-N hydrolase (EC 3.5.1.*) inhibitors CHEBI:76807 EC 3.5.1.* (non-peptide linear amide C-N hydrolase) inhibitor CHEBI:76807 EC 3.5.1.* (non-peptide linear amide C-N hydrolase) inhibitors ChEBI EC 3.5.1.* inhibitor ChEBI EC 3.5.1.* inhibitors ChEBI non-peptide linear amide C-N hydrolase (EC 3.5.1.*) inhibitor ChEBI non-peptide linear amide C-N hydrolase (EC 3.5.1.*) inhibitors ChEBI Any eukaryotic metabolite produced during a metabolic reaction in plants, the kingdom that include flowering plants, conifers and other gymnosperms. CHEBI:75766 CHEBI:76925 chebi_ontology plant metabolites plant secondary metabolites CHEBI:76924 plant metabolite CHEBI:76924 plant metabolites ChEBI plant secondary metabolites ChEBI Any eukaryotic metabolite produced during a metabolic reaction in fungi, the kingdom that includes microorganisms such as the yeasts and moulds. CHEBI:75765 CHEBI:76947 chebi_ontology fungal metabolites CHEBI:76946 fungal metabolite CHEBI:76946 fungal metabolites ChEBI Any human metabolite produced by metabolism of a xenobiotic compound in humans. chebi_ontology human xenobiotic metabolites CHEBI:76967 human xenobiotic metabolite CHEBI:76967 human xenobiotic metabolites ChEBI Any prokaryotic metabolite produced during a metabolic reaction in bacteria. CHEBI:75760 CHEBI:76970 chebi_ontology CHEBI:76969 bacterial metabolite CHEBI:76969 Any bacterial metabolite produced during a metabolic reaction in Escherichia coli. chebi_ontology E.coli metabolite E.coli metabolites Escherichia coli metabolites CHEBI:76971 Escherichia coli metabolite CHEBI:76971 E.coli metabolite ChEBI E.coli metabolites ChEBI Escherichia coli metabolites ChEBI Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens). CHEBI:75770 CHEBI:77123 chebi_ontology H. sapiens metabolite H. sapiens metabolites Homo sapiens metabolite Homo sapiens metabolites CHEBI:77746 human metabolite CHEBI:77746 H. sapiens metabolite ChEBI H. sapiens metabolites ChEBI Homo sapiens metabolite ChEBI Homo sapiens metabolites ChEBI An EC 3.5.1.* (non-peptide linear amide C-N hydrolase) inhibitor that interferes with the action of amidase (EC 3.5.1.4). Wikipedia:Amidase chebi_ontology EC 3.5.1.4 (amidase) inhibitors EC 3.5.1.4 inhibitor EC 3.5.1.4 inhibitors N-acetylaminohydrolase inhibitor N-acetylaminohydrolase inhibitors acylamidase inhibitor acylamidase inhibitors acylamide amidohydrolase inhibitor acylamide amidohydrolase inhibitors amidase (EC 3.5.1.4) inhibitor amidase (EC 3.5.1.4) inhibitors amidase inhibitor amidase inhibitors amidohydrolase inhibitor amidohydrolase inhibitors deaminase inhibitor deaminase inhibitors fatty acylamidase inhibitor fatty acylamidase inhibitors CHEBI:77941 EC 3.5.1.4 (amidase) inhibitor CHEBI:77941 EC 3.5.1.4 (amidase) inhibitors ChEBI EC 3.5.1.4 inhibitor ChEBI EC 3.5.1.4 inhibitors ChEBI N-acetylaminohydrolase inhibitor ChEBI N-acetylaminohydrolase inhibitors ChEBI acylamidase inhibitor ChEBI acylamidase inhibitors ChEBI acylamide amidohydrolase inhibitor ChEBI acylamide amidohydrolase inhibitors ChEBI amidase (EC 3.5.1.4) inhibitor ChEBI amidase (EC 3.5.1.4) inhibitors ChEBI amidase inhibitor ChEBI amidase inhibitors ChEBI amidohydrolase inhibitor ChEBI amidohydrolase inhibitors ChEBI deaminase inhibitor ChEBI deaminase inhibitors ChEBI fatty acylamidase inhibitor ChEBI fatty acylamidase inhibitors ChEBI A food additive that is a (generally inert) gas which is used to envelop foodstuffs during packing and so protect them from unwanted chemical reactions such as food spoilage or oxidation during subsequent transport and storage. The term includes propellant gases, used to expel foods from a container. Wikipedia:Packaging_gas chebi_ontology food packaging gases CHEBI:77974 food packaging gas CHEBI:77974 food packaging gases ChEBI A physiological role played by any substance that is distributed in foodstuffs. It includes materials derived from plants or animals, such as vitamins or minerals, as well as environmental contaminants. chebi_ontology dietary component dietary components food components CHEBI:78295 food component CHEBI:78295 dietary component ChEBI dietary components ChEBI food components ChEBI A substance used in a thermodynamic heat pump cycle or refrigeration cycle that undergoes a phase change from a gas to a liquid and back. Refrigerants are used in air-conditioning systems and freezers or refrigerators and are assigned a "R" number (by ASHRAE - formerly the American Society of Heating, Refrigerating and Air Conditioning Engineers), which is determined systematically according to their molecular structure. Wikipedia:Refrigerant chebi_ontology refrigerants CHEBI:78433 refrigerant CHEBI:78433 refrigerants ChEBI An amino acid-zwitterion obtained by transfer of a proton from the carboxy to the amino group of any alpha-amino acid; major species at pH 7.3. CHEBI:83409 chebi_ontology alpha-amino acid zwitterion alpha-amino acid zwitterions alpha-amino-acid zwitterions an alpha-amino acid CHEBI:78608 alpha-amino-acid zwitterion CHEBI:78608 alpha-amino acid zwitterion ChEBI alpha-amino acid zwitterions ChEBI alpha-amino-acid zwitterions ChEBI an alpha-amino acid UniProt Any organooxygen compound that is a polyhydroxy-aldehyde or -ketone, or a compound derived from one. Carbohydrates contain only carbon, hydrogen and oxygen and usually have an empirical formula Cm(H2O)n; carbohydrate derivatives may contain other elements by substitution or condensation. chebi_ontology carbohydrates and derivatives carbohydrates and their derivatives CHEBI:78616 carbohydrates and carbohydrate derivatives CHEBI:78616 carbohydrates and derivatives ChEBI carbohydrates and their derivatives ChEBI Any inorganic anion with a valency of two. chebi_ontology divalent inorganic anions CHEBI:79388 divalent inorganic anion CHEBI:79388 divalent inorganic anions ChEBI Any inorganic anion with a valency of one. chebi_ontology monovalent inorganic anions CHEBI:79389 monovalent inorganic anion CHEBI:79389 monovalent inorganic anions ChEBI An animal metabolite produced by arthropods such as crabs, lobsters, crayfish, shrimps and krill. chebi_ontology crustacean metabolites CHEBI:83039 crustacean metabolite CHEBI:83039 crustacean metabolites ChEBI A Daphnia metabolite produced by the species Daphnia magna. chebi_ontology Daphnia magna metabolites CHEBI:83056 Daphnia magna metabolite CHEBI:83056 Daphnia magna metabolites ChEBI A crustacean metabolite produced by the genus of small planktonic arthropods, Daphnia Wikipedia:Daphnia chebi_ontology Daphnia metabolites CHEBI:83057 Daphnia metabolite CHEBI:83057 Daphnia metabolites ChEBI Any member of the class of indoles carrying at least one hydroxy group. chebi_ontology CHEBI:84729 hydroxyindoles CHEBI:84729 CLM:1000041 CLM:1000043 CLM:1000056 CL:0000000 A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane. CALOHA:TS-2035 FMA:68646 GO:0005623 KUPO:0000002 MESH:D002477 VHOG:0001533 WBbt:0004017 XAO:0003012 The definition of cell is intended to represent all cells, and thus a cell is defined as a material entity and not an anatomical structure, which implies that it is part of an organism (or the entirety of one). cell A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane. CARO:mah CL:0000005 Any fibroblast that is derived from the neural crest. fibroblast neural crest derived neural crest derived fibroblast Any fibroblast that is derived from the neural crest. https://orcid.org/0000-0001-5208-3432 CL:0000006 Any sensory receptor cell that is a(n) neuron and is capable of some detection of stimulus involved in sensory perception. neuronal receptor cell (sensu Animalia) neuronal receptor cell Any sensory receptor cell that is a(n) neuron and is capable of some detection of stimulus involved in sensory perception. FBC:Autogenerated CL:0000007 A cell found in the embryo before the formation of all the gem layers is complete. early embryonic cell (metazoa) A cell found in the embryo before the formation of all the gem layers is complete. GOC:tfm CL:0000008 Cell that is part of the migratory cranial neural crest population. Migratory cranial neural crest cells develop from premigratory cranial neural crest cells and have undergone epithelial to mesenchymal transition and delamination. migratory cranial neural crest cell Cell that is part of the migratory cranial neural crest population. Migratory cranial neural crest cells develop from premigratory cranial neural crest cells and have undergone epithelial to mesenchymal transition and delamination. ZFA:0007091 https://orcid.org/0000-0001-5208-3432 CL:0000011 Cell that is part of the migratory trunk neural crest population. Migratory trunk neural crest cells develop from premigratory trunk neural crest cells and have undergone epithelial to mesenchymal transition and delamination. migratory trunk neural crest cell Cell that is part of the migratory trunk neural crest population. Migratory trunk neural crest cells develop from premigratory trunk neural crest cells and have undergone epithelial to mesenchymal transition and delamination. ZFA:0007095 https://orcid.org/0000-0001-5208-3432 CL:0000014 A stem cell that is the precursor of gametes. germline stem cell germ line stem cell A stem cell that is the precursor of gametes. doi:10.1016/j.stem.2012.05.016 CL:0000021 Female germ cell is a germ cell that supports female gamete production. MA:0000388 VHOG:0001530 ncithesaurus:Egg female germ cell Female germ cell is a germ cell that supports female gamete production. GOC:tfm PMID:11023867 PMID:20454446 CL:0000022 A stem cell that is the precursor of female gametes. female germ line stem cell A stem cell that is the precursor of female gametes. doi:10.1016/j.stem.2012.05.016 CL:0000023 A female germ cell that has entered meiosis. BTO:0000964 CALOHA:TS-0711 FMA:18644 MESH:D009865 WBbt:0006797 oogonium oocyte A female germ cell that has entered meiosis. GOC:tfm ISBN:0721662544 CL:0000024 An undifferentiated germ cell that proliferates rapidly and gives rise to oocytes. FMA:83673 oogonial cell An undifferentiated germ cell that proliferates rapidly and gives rise to oocytes. GOC:tfm ISBN:0721662544 CL:0000025 A female gamete where meiosis has progressed to metaphase II and is able to participate in fertilization. BTO:0000369 BTO:0003801 CALOHA:TS-2191 FMA:67343 MESH:D010063 mature oocyte ovum egg cell A female gamete where meiosis has progressed to metaphase II and is able to participate in fertilization. GOC:tfm ISBN:0721662544 CL:0000027 A smooth muscle cell derived from the neural crest. smooth muscle cell neural crest derived A smooth muscle cell derived from the neural crest. https://orcid.org/0000-0001-5208-3432 CL:0000029 Any neuron that develops from some migratory neural crest cell. neuron neural crest derived neural crest derived neuron Any neuron that develops from some migratory neural crest cell. FBC:Autogenerated CL:0000030 A non-terminally differentiated cell that develops form the neuroectoderm. Glioblast has the potential to differentiate into various types of glial cells, including astrocytes and oligodendrocytes. glioblast A non-terminally differentiated cell that develops form the neuroectoderm. Glioblast has the potential to differentiate into various types of glial cells, including astrocytes and oligodendrocytes. PMID:37824650 Wikipedia:Glioblast CL:0000031 A cell that will develop into a neuron often after a migration phase. BTO:0000930 FMA:70563 neuroblast neuroblast (sensu Vertebrata) A cell that will develop into a neuron often after a migration phase. GOC:NV http://en.wikipedia.org/wiki/Neuroblast CL:0000034 A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. CALOHA:TS-2086 FMA:63368 animal stem cell This term applies to metazoan. For plant stem cells, consider using PO:0004011 ‘initial cell’ or its parent PO:0004010 ‘meristematic cell’. stem cell A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. GOC:tfm MESH:D013234 CL:0000035 A stem cell that self-renews as well as give rise to a single mature cell type. FMA:70569 unipotent stem cell unipotential stem cell single fate stem cell A stem cell that self-renews as well as give rise to a single mature cell type. GOC:tfm CL:0000036 epithelial stem cell epithelial fate stem cell CL:0000037 A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system. Hematopoietic stem cells lack cell markers of effector cells (lin-negative). Lin-negative is defined by lacking one or more of the following cell surface markers: CD2, CD3 epsilon, CD4, CD5 ,CD8 alpha chain, CD11b, CD14, CD19, CD20, CD56, ly6G, ter119. BTO:0000725 CALOHA:TS-0448 FMA:86475 MESH:D006412 VHOG:0001485 blood forming stem cell hemopoietic stem cell colony forming unit hematopoietic Markers differ between species, and two sets of markers have been described for mice. HSCs are reportedly CD34-positive, CD45-positive, CD48-negative, CD150-positive, CD133-positive, and CD244-negative. hematopoietic stem cell A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system. Hematopoietic stem cells lack cell markers of effector cells (lin-negative). Lin-negative is defined by lacking one or more of the following cell surface markers: CD2, CD3 epsilon, CD4, CD5 ,CD8 alpha chain, CD11b, CD14, CD19, CD20, CD56, ly6G, ter119. GOC:add GOC:dsd GOC:tfm PMID:19022770 http://en.wikipedia.org/wiki/Hematopoietic_stem_cell CL:0000038 A progenitor cell committed to the erythroid lineage. BTO:0004911 blast forming unit erythroid burst forming unit erythroid colony forming unit erythroid erythroid stem cell erythroid progenitor cell A progenitor cell committed to the erythroid lineage. GOC:add ISBN:0721601464 CL:0000039 A cell that is within the developmental lineage of gametes and is able to pass along its genetic material to offspring. Originally this term had some plant germ line cell children. germ line cell A cell that is within the developmental lineage of gametes and is able to pass along its genetic material to offspring. GOC:tfm ISBN:0721662544 CL:0000048 A stem cell that can give rise to multiple lineages of cells. FMA:84789 multi-fate stem cell multifate stem cell multipotent cell multipotent stem cell multi fate stem cell A stem cell that can give rise to multiple lineages of cells. GOC:add CL:0000049 A progenitor cell committed to myeloid lineage, including the megakaryocyte and erythroid lineages. BTO:0004730 common myeloid precursor colony forming unit granulocyte, erythrocyte, macrophage, and megakaryocyte multipotential myeloid stem cell myeloid stem cell pluripotent stem cell (bone marrow) This cell type is intended to be compatible with any vertebrate common myeloid progenitor. For mammalian CMP known to be CD34-positive, please use the term 'common myeloid progenitor, CD34-positive' (CL_0001059). common myeloid progenitor A progenitor cell committed to myeloid lineage, including the megakaryocyte and erythroid lineages. GOC:add ISBN:0878932437 MESH:D023461 colony forming unit granulocyte, erythrocyte, macrophage, and megakaryocyte ISBN:0878932437 multipotential myeloid stem cell ISBN:0878932437 myeloid stem cell ISBN:0878932437 pluripotent stem cell (bone marrow) ISBN:0878932437 CL:0000050 A progenitor cell committed to the megakaryocyte and erythroid lineages. CFU-EM CFU-MegE MEP Meg/E progenitor colony forming unit erythroid megakaryocyte megakaryocyte/erythrocyte progenitor megakaryocyte/erythroid progenitor cell MEPs are reportedly CD19-negative, CD34-negative, CD45RA-negative, CD110-positive, CD117-positive, and SCA1-negative and reportedly express the transcription factors GATA-1 and NF-E2. megakaryocyte-erythroid progenitor cell A progenitor cell committed to the megakaryocyte and erythroid lineages. GOC:add GOC:dsd GOC:tfm MESH:D055015 PMID:16647566 http://en.wikipedia.org/wiki/Megakaryocyte-erythroid_progenitor_cell CL:0000051 A oligopotent progenitor cell committed to the lymphoid lineage. common lymphocyte precursor common lymphocyte progenitor common lymphoid precursor committed lymphopoietic stem cell early lymphocyte progenitor lymphoid stem cell lymphopoietic stem cell CLP are CD7-positive, CD10-positive, CD19-negative, CD34-positive, CD45RA-positive, CD79a-negative, CD127-positive, AA4.1-positive, RAG-negative, Sca-1-low, sIgM-negative, sIgD-negative, TdT-negative, Vpre-B-negative, and pre-BCR-negative. Expression of transcription factors include E2A-positive, EBF-positive, Ikaros-negative, PU.1-negative, and Pax5-negative. common lymphoid progenitor A oligopotent progenitor cell committed to the lymphoid lineage. GOC:add GOC:dsd GOC:tfm PMID:10407577 PMID:16551251 CL:0000052 A stem cell from which all cells of the body can form. FMA:84790 MESH:D039901 totipotential stem cell totipotent stem cell A stem cell from which all cells of the body can form. GOC:add GOC:tfm CL:0000055 A precursor cell with a limited number of potential fates. BTO:0000125 FMA:84782 blast cell define using PATO mulit-potent or oligopotent? non-terminally differentiated cell A precursor cell with a limited number of potential fates. SANBI:mhl CL:0000056 A cell that is commited to differentiating into a muscle cell. Embryonic myoblasts develop from the mesoderm. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes. Myoblasts also occur as transient populations of cells in muscles undergoing repair. BTO:0000222 CALOHA:TS-0650 FMA:70335 VHOG:0001529 myoblast A cell that is commited to differentiating into a muscle cell. Embryonic myoblasts develop from the mesoderm. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes. Myoblasts also occur as transient populations of cells in muscles undergoing repair. GOC:tfm MESH:D032446 PMID:21849021 CL:0000057 A connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules. Flattened and irregular in outline with branching processes; appear fusiform or spindle-shaped. BTO:0000452 CALOHA:TS-0362 FMA:63877 NCIT:C12482 VHOG:0001482 These cells may be vimentin-positive, fibronectin-positive, fsp1-positive, MMP-1-positive, collagen I-positive, collagen III-positive, and alpha-SMA-negative. fibroblast A connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules. Flattened and irregular in outline with branching processes; appear fusiform or spindle-shaped. ISBN:0517223651 MESH:D005347 http://en.wikipedia.org/wiki/Fibroblast CL:0000058 Skeletogenic cell that is typically non-terminally differentiated, secretes an avascular, GAG rich matrix; is not buried in cartilage tissue matrix, retains the ability to divide, located adjacent to cartilage tissue (including within the perichondrium), and develops from prechondroblast (and thus prechondrogenic) cell. BTO:0003607 FMA:66783 chrondoplast chondroblast Skeletogenic cell that is typically non-terminally differentiated, secretes an avascular, GAG rich matrix; is not buried in cartilage tissue matrix, retains the ability to divide, located adjacent to cartilage tissue (including within the perichondrium), and develops from prechondroblast (and thus prechondrogenic) cell. GOC:tfm GO_REF:0000034 ISBN:0618947256 CL:0000064 A cell that has a filiform extrusion of the cell surface. VHOG:0001532 XAO:0000031 ciliated cell A cell that has a filiform extrusion of the cell surface. GOC:tfm CL:0000066 A cell that is usually found in a two-dimensional sheet with a free surface. The cell has a cytoskeleton that allows for tight cell to cell contact and for cell polarity where apical part is directed towards the lumen and the basal part to the basal lamina. BTO:0000414 CALOHA:TS-2026 CARO:0000077 FMA:66768 WBbt:0003672 epitheliocyte epithelial cell A cell that is usually found in a two-dimensional sheet with a free surface. The cell has a cytoskeleton that allows for tight cell to cell contact and for cell polarity where apical part is directed towards the lumen and the basal part to the basal lamina. FB:ma GOC:tfm MESH:D004847 CL:0000067 An epithelial cell that has a cilia. FMA:70605 ciliated epithelial cell An epithelial cell that has a cilia. GOC:tfm CL:0000068 An epithelial cell that is part of a duct. duct epithelial cell An epithelial cell that is part of a duct. https://orcid.org/0000-0001-5208-3432 CL:0000069 branched duct epithelial cell CL:0000071 An endothelial cell that lines the vasculature. blood vessel endothelial cell An endothelial cell that lines the vasculature. GOC:tfm CL:0000075 A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube. columnar/cuboidal epithelial cell A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube. GO:0002065 https://orcid.org/0000-0001-5208-3432 CL:0000076 CALOHA:TS-1249 squamous epithelial cell CL:0000077 A flat, squamous-like epithelial cell of mesodermal origin. It forms the mesothelium, which lines the body's serous cavities including the pleural, peritoneal, and pericardial spaces. This cell plays a crucial role in synthesizing and secreting lubricants, such as glycosaminoglycans and surfactants, which minimize friction between adjacent tissues during movement. FMA:66773 mesotheliocyte Mesothelial cells, which morphologically resemble squamous epithelial cells, express both epithelial markers (cytokeratins) and mesenchymal markers (vimentin), reflecting their mesodermal origin. They feature surface microvilli and apical-basal polarity. Under certain conditions, they can undergo mesothelial-to-mesenchymal transition. These cells also produce extracellular matrix proteins, maintain serosal homeostasis, and facilitate fluid transport. mesothelial cell A flat, squamous-like epithelial cell of mesodermal origin. It forms the mesothelium, which lines the body's serous cavities including the pleural, peritoneal, and pericardial spaces. This cell plays a crucial role in synthesizing and secreting lubricants, such as glycosaminoglycans and surfactants, which minimize friction between adjacent tissues during movement. GOC:tfm ISBN:0721662544 PMID:26106328 Mesothelial cells, which morphologically resemble squamous epithelial cells, express both epithelial markers (cytokeratins) and mesenchymal markers (vimentin), reflecting their mesodermal origin. They feature surface microvilli and apical-basal polarity. Under certain conditions, they can undergo mesothelial-to-mesenchymal transition. These cells also produce extracellular matrix proteins, maintain serosal homeostasis, and facilitate fluid transport. PMID:26106328 CL:0000078 Any squamous epithelial cell that is part of some periderm. peridermal cell Any squamous epithelial cell that is part of some periderm. FBC:Autogenerated CL:0000080 A cell which moves among different tissues of the body, via blood, lymph, or other medium. circulating cell A cell which moves among different tissues of the body, via blood, lymph, or other medium. GOC:add CL:0000081 A cell found predominately in the blood. FMA:62844 MESH:D001773 blood cell A cell found predominately in the blood. GOC:add GOC:tfm CL:0000082 An epithelial cell of the lung. BTO:0004299 lung epithelial cell epithelial cell of lung An epithelial cell of the lung. https://orcid.org/0000-0001-5208-3432 CL:0000095 neuron associated cell CL:0000098 A specialized epithelial cell involved in sensory perception. Restricted to special sense organs of the olfactory, gustatory, and vestibulocochlear receptor systems; contain sensory cells surrounded by supportive, non-receptive cells. neuroepithelial cell BTO:0004301 The term "neuroepithelial cell" is used to describe both this cell type and neurecto-epithelial cell (CL:0000710). sensory epithelial cell A specialized epithelial cell involved in sensory perception. Restricted to special sense organs of the olfactory, gustatory, and vestibulocochlear receptor systems; contain sensory cells surrounded by supportive, non-receptive cells. GOC:tfm ISBN:0517223651 ISBN:0721662544 CL:0000099 Most generally any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region as contrasted with projection neurons which have axons projecting to other brain regions. BTO:0003811 FMA:67313 WBbt:0005113 CNS interneuron interneuron Most generally any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region as contrasted with projection neurons which have axons projecting to other brain regions. GOC:tfm MESH:D007395 CL:0000100 An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes or inhibits movement. BTO:0000312 FMA:83617 WBbt:0005409 motoneuron motor neuron An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes or inhibits movement. MESH:D009046 PMID:16875686 CL:0000101 Any neuron having a sensory function; an afferent neuron conveying sensory impulses. BTO:0001037 FMA:84649 MESH:D011984 WBbt:0005759 sensory neuron Any neuron having a sensory function; an afferent neuron conveying sensory impulses. ISBN:0721662544 CL:0000103 A type of interneuron that has two neurites, usually an axon and a dendrite, extending from opposite poles of an ovoid cell body. FMA:67282 bipolar neuron A type of interneuron that has two neurites, usually an axon and a dendrite, extending from opposite poles of an ovoid cell body. GOC:tfm ISBN:0444009442 CL:0000107 A neuron whose cell body is within an autonomic ganglion. FMA:80121 autonomic neuron A neuron whose cell body is within an autonomic ganglion. GOC:tfm CL:0000108 A neuron that uses acetylcholine as a vesicular neurotransmitter. BTO:0004902 FMA:84796 MESH:D059329 WBbt:0006840 cholinergic neuron A neuron that uses acetylcholine as a vesicular neurotransmitter. GOC:tfm CL:0000114 An ectodermal cell that is part of the external ectoderm, forming the outermost layer of the developing embryo. It is characterized by its polarized nature, with distinct apical and basal surfaces (Ferrante Jr., Reinke, & Stanley, 1995). Surface ectodermal cell gives rise to the epidermis, hair follicles, nails, sensory organs, and specialized structures like the apical ectodermal ridge crucial for limb development (Skoufa et al., 2024). FMA:72552 https://cellxgene.cziscience.com/cellguide/CL_0000114 cell of surface ectoderm surface ectoderm cell surface ectodermal cell An ectodermal cell that is part of the external ectoderm, forming the outermost layer of the developing embryo. It is characterized by its polarized nature, with distinct apical and basal surfaces (Ferrante Jr., Reinke, & Stanley, 1995). Surface ectodermal cell gives rise to the epidermis, hair follicles, nails, sensory organs, and specialized structures like the apical ectodermal ridge crucial for limb development (Skoufa et al., 2024). PMID:7892198 Wikipedia:Surface_ectoderm doi:/10.1101/2024.07.02.601324 surface ectoderm cell doi:/10.1101/2024.07.02.601324 CL:0000115 An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal. In mammals, endothelial cell has vimentin filaments and is derived from the mesoderm. BTO:0001176 CALOHA:TS-0278 FMA:66772 endotheliocyte From FMA: 9.07.2001: Endothelial cell has always been classified as a kind of epithelial cell, specifically a squamous cell but that is not true. First, endothelial cell can either be squamous or cuboidal (e.g. high-endothelial cell) and secondly, it has different embryological derivation (mesodermal) than a true epithelial cell (ectodermal and endodermal). The basis for present classification is the fact that it comprises the outermost layer or lining of anatomical structures (location-based) but a better structural basis for the differentia is the cytoskeleton of the cell. Endothelial cell has vimentin filaments while an epithelial cell has keratin filaments. [Onard]. endothelial cell An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal. In mammals, endothelial cell has vimentin filaments and is derived from the mesoderm. GOC:tfm MESH:D042783 PMID:21275341 http://en.wikipedia.org/wiki/Endothelial_cell https://sourceforge.net/tracker/?func=detail&atid=440764&aid=3364936&group_id=36855 CL:0000122 A neuron that has dendritic processes radiating from the cell body forming a star-like shape. BTO:0002316 stellate neuron A neuron that has dendritic processes radiating from the cell body forming a star-like shape. ISBN:9780123973481 CL:0000123 neuron associated cell (sensu Vertebrata) CL:0000125 A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons. BTO:0002606 CALOHA:TS-0415 FMA:54536 https://cellxgene.cziscience.com/cellguide/CL_0000125 neuroglial cell neuroglia Not all glial cells develop from glioblasts, with microglia developing from the mesoderm instead. See https://github.com/obophenotype/cell-ontology/issues/1571 glial cell A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons. MESH:D009457 CL:0000126 A neuroglial cell of ectodermal origin, i.e., the astrocytes and oligodendrocytes considered together. BTO:0000771 CALOHA:TS-2027 FMA:54538 macrogliocyte macroglial cell A neuroglial cell of ectodermal origin, i.e., the astrocytes and oligodendrocytes considered together. GOC:tfm ISBN:0721662544 CL:0000128 A class of large neuroglial (macroglial) cells in the central nervous system. Form the insulating myelin sheath of axons in the central nervous system. BTO:0000962 CALOHA:TS-0709 FMA:54540 OLs oligodendroglia Oligodendrocytes are reportedly MDP-positive and CD4-negative. oligodendrocyte A class of large neuroglial (macroglial) cells in the central nervous system. Form the insulating myelin sheath of axons in the central nervous system. MESH:D009836 http://en.wikipedia.org/wiki/Oligodendrocyte OLs PMID:8734446 CL:0000131 An endothelial cell that lines the blood and lymphatic vessels of the digestive tract. This cell forms the gut–vascular barrier (GVB) through tight junctions and crosstalk with pericytes and enteric glial cells, regulating the passage of nutrients and immune cells while restricting microbial translocation into the bloodstream. https://cellxgene.cziscience.com/cellguide/CL_0000131 gut endothelial cell An endothelial cell that lines the blood and lymphatic vessels of the digestive tract. This cell forms the gut–vascular barrier (GVB) through tight junctions and crosstalk with pericytes and enteric glial cells, regulating the passage of nutrients and immune cells while restricting microbial translocation into the bloodstream. PMID:26564856 CL:0000133 Ectoderm destined to be nervous tissue. neurectoderm cell neurectodermal cell Ectoderm destined to be nervous tissue. GOC:tfm ISBN:068340007X CL:0000134 A connective tissue cell that normally gives rise to other cells that are organized as three-dimensional masses. In humans, this cell type is CD73-positive, CD90-positive, CD105-positive, CD45-negative, CD34-negative, and MHCII-negative. They may further differentiate into osteoblasts, adipocytes, myocytes, neurons, or chondroblasts in vitro. Originally described as residing in the bone marrow, this cell type is now known to reside in many, if not all, adult organs. BTO:0002625 BTO:0003298 FMA:70546 bone marrow stromal cells colony-forming unit-fibroblast marrow stromal cells mesenchymal precursor cell mesenchymal stem cell mesenchymal stromal cell Many but not all mesenchymal cells derive from the mesoderm. MSCs are reportedly CD3-negative, CD4-negative, CD5-negative, CD8-negative, CD11a-negative, CD11b-negative, CD14-negative, CD19-negative, CD29-positive, CD31-negative, CD34-negative, CD38-negative, CD40-negative, CD44-positive, CD45-negative, CD49-positive, CD54-positive, CD66b-negative, CD79a-negative, CD80-negative, CD102-positive, CD106-positive, CD117-positive, CD121a-positive, CD121b-positive, CD123-positive, CD124-positive, CD133-negative, CD146-positive, CD166-positive, CD271-positive, B220-negative, Gr1-negative, MHCI-positive, MHCII-negative, SSEA4-negative, sca1-positive, Ter119-negative, and glycophorin A-negative. Cultured MSCs are capable of producing stem cell factor, IL7, IL8, IL11, TGF-beta, cofilin, galectin-1, laminin-receptor 1, cyclophilin A, and MMP-2. mesenchymal stem cell A connective tissue cell that normally gives rise to other cells that are organized as three-dimensional masses. In humans, this cell type is CD73-positive, CD90-positive, CD105-positive, CD45-negative, CD34-negative, and MHCII-negative. They may further differentiate into osteoblasts, adipocytes, myocytes, neurons, or chondroblasts in vitro. Originally described as residing in the bone marrow, this cell type is now known to reside in many, if not all, adult organs. FB:ma GOC:dsd PMCID:PMC2613570 PMID:10102814 PMID:16923606 PMID:17986482 PMID:19960544 http://en.wikipedia.org/wiki/Mesenchymal_stem_cell http://www.copewithcytokines.de/cope.cgi?key=mesenchymal%20stem%20cells marrow stromal cells PMID:11378515 CL:0000136 A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of triglycerides. BTO:0000443 CALOHA:TS-0012 FMA:63880 adipose cell fat cell adipocyte A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of triglycerides. MESH:D017667 CL:0000138 Skeletogenic cell that is terminally differentiated, secretes an avascular, GAG-rich matrix, is embedded in cartilage tissue matrix, retains the ability to divide, and develops from a chondroblast cell. BTO:0000249 CALOHA:TS-0138 FMA:66782 cartilage cell chondrocyte Skeletogenic cell that is terminally differentiated, secretes an avascular, GAG-rich matrix, is embedded in cartilage tissue matrix, retains the ability to divide, and develops from a chondroblast cell. GO_REF:0000034 MESH:D019902 CL:0000147 A pigment cell is a cell that contains pigment granules. VHOG:0001678 chromatocyte chromatophore pigment cell A pigment cell is a cell that contains pigment granules. GOC:tfm CL:0000149 pigment cell visual pigment cell CL:0000150 An epithelial cell, located in a gland, that is specialised for the synthesis and secretion of specific biomolecules, such as hormones, or mucous. CALOHA:TS-2085 FMA:86494 glandular epithelial cell glandular secretory epithelial cell An epithelial cell, located in a gland, that is specialised for the synthesis and secretion of specific biomolecules, such as hormones, or mucous. GOC:tfm ORCID:0000-0002-7073-9172 CL:0000151 A cell that specializes in controlled release of one or more substances. BTO:0003659 FMA:86916 secretory cell A cell that specializes in controlled release of one or more substances. GOC:tfm ISBN:0721662544 CL:0000152 A cell of an exocrine gland; i.e. a gland that discharges its secretion via a duct. FMA:16014 exocrine cell A cell of an exocrine gland; i.e. a gland that discharges its secretion via a duct. ISBN:0198547684 CL:0000153 A cell that secretes glycosaminoglycans. GAG secreting cell hyaluronic acid secreting cell glycosaminoglycan secreting cell A cell that secretes glycosaminoglycans. GOC:tfm CL:0000154 Any secretory cell that is capable of some protein secretion. protein secreting cell Any secretory cell that is capable of some protein secretion. FBC:Autogenerated CL:0000159 seromucus secreting cell CL:0000163 A cell of an endocrine gland, ductless glands that secrete substances which are released directly into the circulation and which influence metabolism and other body functions. FMA:83809 endocrinocyte endocrine cell A cell of an endocrine gland, ductless glands that secrete substances which are released directly into the circulation and which influence metabolism and other body functions. MESH:D055098 CL:0000164 An endocrine cell that is located in the epithelium of the gastrointestinal tract or in the pancreas. BTO:0003865 FMA:62930 MESH:D019858 https://cellxgene.cziscience.com/cellguide/CL_0000164 enteroendocrine cell An endocrine cell that is located in the epithelium of the gastrointestinal tract or in the pancreas. GOC:tfm SANBI:mhl CL:0000165 A neuron that is capable of some hormone secretion in response to neuronal signals. BTO:0002691 FMA:83810 neurosecretory cell neurosecretory neuron The neurosecretory cell is neither an ordinary neuron nor an endocrine cell, but a combination of both. Its neuronal features resemble those of ordinary neurons concerning both structure and function. The production of a visible secretory material marks the neurosecretory neuron as a gland cell, and the fact that extractable cellular products act in the manner of hormones places it in the realm of endocrine elements. The modern definition of neurosecretion has evolved to include the release of any neuronal secretory product from a neuron. neuroendocrine cell A neuron that is capable of some hormone secretion in response to neuronal signals. MESH:D055099 The neurosecretory cell is neither an ordinary neuron nor an endocrine cell, but a combination of both. Its neuronal features resemble those of ordinary neurons concerning both structure and function. The production of a visible secretory material marks the neurosecretory neuron as a gland cell, and the fact that extractable cellular products act in the manner of hormones places it in the realm of endocrine elements. The modern definition of neurosecretion has evolved to include the release of any neuronal secretory product from a neuron. PMID:5342440 https://www.clinicalkey.com/#!/content/book/3-s2.0-B9780323555968000073 CL:0000167 Any secretory cell that is capable of some peptide hormone secretion. peptide hormone secreting cell Any secretory cell that is capable of some peptide hormone secretion. FBC:Autogenerated CL:0000170 A cell that secretes glucagon. FMA:84045 glucagon-secreting cell glucagon secreting cell A cell that secretes glucagon. GOC:tfm CL:0000172 Any secretory cell that is capable of some somatostatin secretion. somatostatin secreting cell Any secretory cell that is capable of some somatostatin secretion. FBC:Autogenerated CL:0000174 Any secretory cell that is capable of some steroid hormone secretion. steroid hormone secreting cell Any secretory cell that is capable of some steroid hormone secretion. FBC:Autogenerated CL:0000183 A cell whose primary function is to shorten. contractile cell A cell whose primary function is to shorten. FB:ma CL:0000187 A mature contractile cell, commonly known as a myocyte. This cell has as part of its cytoplasm myofibrils organized in various patterns. BTO:0000888 BTO:0000902 CALOHA:TS-2032 FMA:67328 WBbt:0003675 muscle fiber myocyte muscle cell A mature contractile cell, commonly known as a myocyte. This cell has as part of its cytoplasm myofibrils organized in various patterns. MESH:D032342 CL:0000188 A somatic cell located in skeletal muscle. BTO:0004392 CALOHA:TS-2158 FMA:9727 https://cellxgene.cziscience.com/cellguide/CL_0000188 skeletal muscle cell cell of skeletal muscle A somatic cell located in skeletal muscle. GOC:tfm CL:0000192 A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast). non-striated muscle cell BTO:0004576 CALOHA:TS-2159 FMA:14072 https://cellxgene.cziscience.com/cellguide/CL_0000192 SMCs myocytes, smooth muscle smooth muscle fiber smooth muscle cell A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast). MESH:D032389 PMID:9315361 http://en.wikipedia.org/wiki/Smooth_muscle_cell SMCs PMID:9315361 myocytes, smooth muscle MESH:D032389 CL:0000197 A cell that is capable of detection of a stimulus involved in sensory perception. MESH:D011984 receptor cell sensory receptor cell CL:0000206 A cell specialized to detect chemical substances and relay that information centrally in the nervous system. Chemoreceptors may monitor external stimuli, as in taste and olfaction, or internal stimuli, such as the concentrations of oxygen and carbon dioxide in the blood. chemoreceptor cell A cell specialized to detect chemical substances and relay that information centrally in the nervous system. Chemoreceptors may monitor external stimuli, as in taste and olfaction, or internal stimuli, such as the concentrations of oxygen and carbon dioxide in the blood. MESH:D002628 CL:0000209 A specialized cell involved in gustatory sensory perception. FMA:67910 taste bud cell taste receptor cell A specialized cell involved in gustatory sensory perception. GOC:tfm ISBN:0618947256 CL:0000210 A cell specialized in detecting light stimuli that are involved in visual perception. BTO:0001060 CALOHA:TS-0868 FMA:86740 photoreceptor cell A cell specialized in detecting light stimuli that are involved in visual perception. MESH:D010786 CL:0000211 A cell whose function is determined by the generation or the reception of an electric signal. electrically active cell A cell whose function is determined by the generation or the reception of an electric signal. FB:ma CL:0000214 A cell located in the synovial joint. CALOHA:TS-0995 synoviocyte synovial cell CL:0000218 A neuroglial cell of the peripheral nervous system which forms the insulating myelin sheaths of peripheral axons. Schwann cell peripheral neuroglial cell CALOHA:TS-0898 FMA:62121 neurilemmal cell myelinating Schwann cell A neuroglial cell of the peripheral nervous system which forms the insulating myelin sheaths of peripheral axons. GOC:cvs GOC:tfm MESH:D012583 CL:0000219 A cell that moves by its own activities. motile cell A cell that moves by its own activities. FB:ma CL:0000221 A cell of the outer of the three germ layers of the embryo. FMA:72549 ectoderm cell ectodermal cell A cell of the outer of the three germ layers of the embryo. MESH:D004475 CL:0000222 A cell of the middle germ layer of the embryo. FMA:72554 https://cellxgene.cziscience.com/cellguide/CL_0000222 mesoblast mesoderm cell mesodermal cell A cell of the middle germ layer of the embryo. MESH:D008648 CL:0000223 A cell of the inner of the three germ layers of the embryo. FMA:72555 endoderm cell endodermal cell A cell of the inner of the three germ layers of the embryo. MESH:D004707 CL:0000225 A cell that lacks a nucleus. FMA:68647 non-nucleated cell anucleate cell A cell that lacks a nucleus. FB:ma CL:0000226 A cell with a single nucleus. single nucleate cell A cell with a single nucleus. FB:ma GOC:tfm CL:0000227 Any cell that has characteristic some binucleate. binucleate cell Any cell that has characteristic some binucleate. FBC:Autogenerated CL:0000228 A cell with more than one nucleus. multinucleated cells polynuclear cells multinucleate cell A cell with more than one nucleus. FB:ma Wikipedia:Multinucleate multinucleated cells Wikipedia:Multinucleate polynuclear cells Wikipedia:Multinucleate CL:0000232 A red blood cell. In mammals, mature erythrocytes are biconcave disks containing hemoglobin whose function is to transport oxygen. BTO:0000424 CALOHA:TS-0290 FMA:81100 RBC red blood cell erythrocyte A red blood cell. In mammals, mature erythrocytes are biconcave disks containing hemoglobin whose function is to transport oxygen. GOC:tfm MESH:D004912 CL:0000255 Any cell that in taxon some Eukaryota. MESH:D005057 eukaryotic cell Any cell that in taxon some Eukaryota. FBC:Autogenerated CL:0000287 Any photoreceptor cell that is part of some eye. eye photoreceptor cell Any photoreceptor cell that is part of some eye. FBC:Autogenerated CL:0000293 A cell whose primary function is to provide structural support, to provide strength and physical integrity to the organism. structural cell A cell whose primary function is to provide structural support, to provide strength and physical integrity to the organism. TAIR:sr CL:0000300 A mature sexual reproductive cell having a single set of unpaired chromosomes. CALOHA:TS-0395 FMA:18649 https://cellxgene.cziscience.com/cellguide/CL_0000300 haploid nucleated cell haploid germ cell gamete A mature sexual reproductive cell having a single set of unpaired chromosomes. GOC:tfm ISBN:0721662544 CL:0000306 lens cell crystallin accumulating cell CL:0000307 An epithelial cell found in the trachea. FMA:74793 tracheocyte This class is for the vertebrate tracheal structure. For the analagous insect cell type, see 'respiratory tube epithelial cell' tracheal epithelial cell An epithelial cell found in the trachea. GOC:tfm CL:0000313 Columnar glandular cell with irregular nucleus, copious granular endoplasmic reticulum and supranuclear granules. Secretes a watery fluid containing proteins known as serous fluid. BTO:0003687 FMA:62511 serous cell serous secreting cell Columnar glandular cell with irregular nucleus, copious granular endoplasmic reticulum and supranuclear granules. Secretes a watery fluid containing proteins known as serous fluid. GOC:tfm ISBN:0517223651 ISBN:0721662544 CL:0000325 A cell that is specialised to accumulate a particular substance(s). stuff accumulating cell A cell that is specialised to accumulate a particular substance(s). FB:ma CL:0000327 extracellular matrix secreting cell CL:0000329 Any cell that is capable of some oxygen transport. oxygen accumulating cell Any cell that is capable of some oxygen transport. FBC:Autogenerated CL:0000333 A cell derived from the specialized ectoderm flanking each side of the embryonic neural plate, which after the closure of the neural tube, forms masses of cells that migrate out from the dorsal aspect of the neural tube to spread throughout the body. FMA:86667 migratory neural crest cell A cell derived from the specialized ectoderm flanking each side of the embryonic neural plate, which after the closure of the neural tube, forms masses of cells that migrate out from the dorsal aspect of the neural tube to spread throughout the body. doi:10.1016/j.stem.2015.02.017 CL:0000335 A mesenchymal cell in embryonic development found in a contracting mass and that gives rise to osteoprogenitors. mesenchyme condensation cell A mesenchymal cell in embryonic development found in a contracting mass and that gives rise to osteoprogenitors. GOC:tfm PMID:5025404 CL:0000339 An early neural cell developing from the early ependymal cell of the neural tube. FMA:70564 spongioblast glioblast (sensu Vertebrata) An early neural cell developing from the early ependymal cell of the neural tube. GOC:tfm ISBN:0618947256 CL:0000347 A cell of the sclera of the eye. scleral cell A cell of the sclera of the eye. GOC:add CL:0000348 A structural cell that is part of optic choroid. choroidal cell of the eye A structural cell that is part of optic choroid. GOC:add CL:0000349 Any cell that is part of some extraembryonic structure. extraembryonic cell Any cell that is part of some extraembryonic structure. FBC:Autogenerated CL:0000351 An extraembryonic cell that develops from a trophectodermal cell. This cell is found in the outer layer of the blastocyst and can invade other structures in the uterus once the blastocyst implants into the uterine wall. A trophoblast cell is involved in the implantation of the embryo into the uterine wall, placental formation, remodelling of maternal vasculature in the uterus, nutrient and gas exchange, hormone production, and immune modulation to support fetal development. FMA:83028 https://cellxgene.cziscience.com/cellguide/CL_0000351 trophoblastic cell trophoblast cell An extraembryonic cell that develops from a trophectodermal cell. This cell is found in the outer layer of the blastocyst and can invade other structures in the uterus once the blastocyst implants into the uterine wall. A trophoblast cell is involved in the implantation of the embryo into the uterine wall, placental formation, remodelling of maternal vasculature in the uterus, nutrient and gas exchange, hormone production, and immune modulation to support fetal development. GOC:tfm MESH:D014327 PMID:37630754 doi:10.1007/978-3-030-84725-8 trophoblastic cell doi:10.1007/978-3-030-84725-8 CL:0000352 A cell of the outer layer of a blastula that gives rise to the ectoderm after gastrulation. epiblast cell A cell of the outer layer of a blastula that gives rise to the ectoderm after gastrulation. GOC:tfm ISBN:0618947256 CL:0000353 An undifferentiated cell produced by early cleavages of the fertilized egg (zygote). BTO:0001473 FMA:72551 blastomere blastoderm cell An undifferentiated cell produced by early cleavages of the fertilized egg (zygote). MESH:D001756 CL:0000355 A multifate stem cell found in skeletal muscle than can differentiate into many different cell types, including muscle. Distinct cell type from satellite cell. FMA:86767 Multi-potency demonstrated ex vivo. At the time of writing, it is unclear whether the endogenous population differentiates into multiple cell types in vivo. multi-potent skeletal muscle stem cell A multifate stem cell found in skeletal muscle than can differentiate into many different cell types, including muscle. Distinct cell type from satellite cell. PMID:18282570 CL:0000359 A smooth muscle cell associated with the vasculature. https://cellxgene.cziscience.com/cellguide/CL_0000359 VSMC vascular smooth muscle cell vascular associated smooth muscle cell A smooth muscle cell associated with the vasculature. GOC:dsd GOC:tfm CL:0000362 An epithelial cell of the integument (the outer layer of an organism). BTO:0001470 CALOHA:TS-0283 FMA:62411 MESH:D000078404 cell of epidermis epithelial cell of skin epidermal cell An epithelial cell of the integument (the outer layer of an organism). Flybase:dsj MA:ma cell of epidermis FMA:62411 epithelial cell of skin FMA:62411 CL:0000365 Diploid cell produced by the fusion of sperm cell nucleus and egg cell. zygote BTO:0000854 EHDAA2:0004546 FMA:72395 animal zygote Diploid cell produced by the fusion of sperm cell nucleus and egg cell. ISBN:0471245208 CL:0000377 tracheoblast CL:0000393 A cell whose function is determined by its response to an electric signal. electrically responsive cell A cell whose function is determined by its response to an electric signal. FB:ma CL:0000397 Any interneuron that has its soma located in some ganglion. ganglion interneuron Any interneuron that has its soma located in some ganglion. FBC:Autogenerated CL:0000404 A cell that initiates an electrical signal and passes that signal to another cell. electrically signaling cell A cell that initiates an electrical signal and passes that signal to another cell. FB:ma CL:0000412 A cell that contains more than two haploid sets of chromosomes. polyploid cell A cell that contains more than two haploid sets of chromosomes. FB:ma PMID:32646579 https://bio.libretexts.org/Bookshelves/Introductory_and_General_Biology/Biology_(Kimball)/07%3A_Cell_Division/7.04%3A_Polyploidy CL:0000413 A cell whose nucleus contains a single haploid genome. haploid cell A cell whose nucleus contains a single haploid genome. FB:ma GOC:tfm CL:0000444 A muscle cell in which the fibers are organised into sarcomeres but in which adjacent myofibrils are offset from each other, producing an oblique banding pattern. Examples include the somatic muscles of nemotodes and cephalopods. obliquely striated muscle cell A muscle cell in which the fibers are organised into sarcomeres but in which adjacent myofibrils are offset from each other, producing an oblique banding pattern. GOC:DOS PMID:8720463 CL:0000447 carbohydrate secreting cell CL:0000457 biogenic amine secreting cell CL:0000458 A cell type that secretes 5-Hydroxytryptamine (serotonin). 5-HT secreting cell 5-Hydroxytryptamine secreting cell serotonin secreting cell A cell type that secretes 5-Hydroxytryptamine (serotonin). GOC:tfm PMID:19630576 CL:0000459 A cell capable of producting norepiniphrine. Norepiniphrine is a catecholamine with multiple roles including as a hormone and a neurotransmitter. In addition, epiniphrine is synthesized from norepiniphrine by the actions of the phenylethanolamine N-methyltransferase enzyme. noradrenaline secreting cell norepinephrin secreting cell norepinephrine secreting cell noradrenergic cell A cell capable of producting norepiniphrine. Norepiniphrine is a catecholamine with multiple roles including as a hormone and a neurotransmitter. In addition, epiniphrine is synthesized from norepiniphrine by the actions of the phenylethanolamine N-methyltransferase enzyme. GOC:tfm ISBN:068340007X CL:0000488 A photoreceptor cell that detects visible light. visible light photoreceptor cell A photoreceptor cell that detects visible light. GOC:tfm CL:0000499 A connective tissue cell of an organ found in the loose connective tissue. BTO:0002064 FMA:83624 stromal cell A connective tissue cell of an organ found in the loose connective tissue. GOC:tfm MESH:D017154 CL:0000513 A precursor cell destined to differentiate into cardiac muscle cell. FMA:84797 cardiac muscle progenitor cell cardiomyocyte progenitor cell cardiac muscle myoblast A precursor cell destined to differentiate into cardiac muscle cell. GOC:tfm MESH:D032386 CL:0000514 A precursor cell destined to differentiate into smooth muscle myocytes. FMA:84798 https://cellxgene.cziscience.com/cellguide/CL_0000514 myoblast, smooth muscle satellite cell smooth muscle myoblast A precursor cell destined to differentiate into smooth muscle myocytes. GOC:tfm MESH:D032390 myoblast, smooth muscle MESH:D032390 CL:0000515 A myoblast that differentiates into skeletal muscle fibers. FMA:84799 skeletal myoblast skeletal muscle myoblast A myoblast that differentiates into skeletal muscle fibers. SANBI:mhl CL:0000525 A cell from the outer syncytial layer of the trophoblast of an early mammalian embryo, directly associated with the maternal blood supply. It secretes hCG in order to maintain progesterone secretion and sustain a pregnancy. FMA:83043 syncytial trophoblast cell syncytiotrophoblastic cell plasmidotrophoblast cell syntrophoblast cell syncytiotrophoblast cell A cell from the outer syncytial layer of the trophoblast of an early mammalian embryo, directly associated with the maternal blood supply. It secretes hCG in order to maintain progesterone secretion and sustain a pregnancy. GOC:tfm ISBN:0323052908 syncytial trophoblast cell PMID:11787150 syncytiotrophoblastic cell PMID:21733368 CL:0000526 A neuron which conveys sensory information centrally from the periphery. FMA:87653 input neuron afferent neuron A neuron which conveys sensory information centrally from the periphery. GOC:tfm MESH:D009475 CL:0000527 A neuron which sends impulses peripherally to activate muscles or secretory cells. output neuron efferent neuron A neuron which sends impulses peripherally to activate muscles or secretory cells. MESH:D009476 CL:0000540 The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system. BTO:0000938 CALOHA:TS-0683 FMA:54527 VHOG:0001483 WBbt:0003679 nerve cell These cells are also reportedly CD4-negative and CD200-positive. They are also capable of producing CD40L and IFN-gamma. neuron The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system. MESH:D009474 http://en.wikipedia.org/wiki/Neuron CL:0000542 A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin. BTO:0000775 CALOHA:TS-0583 FMA:62863 MESH:D008214 VHOG:0001535 Editors note: consider adding taxon constraint to vertebrata (PMID:18025161) lymphocyte A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin. GOC:add ISBN:0683073696 ISBN:0781735149 CL:0000547 An immature, nucleated erythrocyte occupying the stage of erythropoeisis that follows formation of erythroid progenitor cells. This cell is CD71-positive, has both a nucleus and a nucleolus, and lacks hematopoeitic lineage markers. FMA:83518 rubriblast pronormoblast proerythroblast An immature, nucleated erythrocyte occupying the stage of erythropoeisis that follows formation of erythroid progenitor cells. This cell is CD71-positive, has both a nucleus and a nucleolus, and lacks hematopoeitic lineage markers. ISBN:0721601464 PMID:1638021 rubriblast ISBN:0721601464 CL:0000549 A nucleated immature erythrocyte, having cytoplasm generally similar to that of the earlier proerythroblast but sometimes even more basophilic, and usually regular in outline. The nucleus is still relatively large, but the chromatin strands are thicker and more deeply staining, giving a coarser appearance; the nucleoli have disappeared. This cell is CD71-positive and lacks hematopoeitic lineage markers. FMA:83505 basophilic normoblast early erythroblast early normoblast prorubricyte basophilic erythroblast A nucleated immature erythrocyte, having cytoplasm generally similar to that of the earlier proerythroblast but sometimes even more basophilic, and usually regular in outline. The nucleus is still relatively large, but the chromatin strands are thicker and more deeply staining, giving a coarser appearance; the nucleoli have disappeared. This cell is CD71-positive and lacks hematopoeitic lineage markers. GOC:tfm ISBN:0721601464 basophilic normoblast ISBN:0721601464 early erythroblast ISBN:0721601464 early normoblast ISBN:0721601464 prorubricyte ISBN:0721601464 CL:0000550 A nucleated, immature erythrocyte in which the nucleus occupies a relatively smaller part of the cell than in its precursor, the basophilic erythroblast. The cytoplasm is beginning to acquire hemoglobin and thus is no longer a purely basophilic, but takes on acidophilic aspects, which becomes progressively more marked as the cell matures. The chromatin of the nucleus is arranged in coarse, deeply staining clumps. This cell is CD71-positive and lacks hematopoeitic lineage markers. FMA:83506 intermediate erythroblast intermediate normoblast polychromatic erythroblast polychromatic normoblast polychromatophilic normoblast rubricyte polychromatophilic erythroblast A nucleated, immature erythrocyte in which the nucleus occupies a relatively smaller part of the cell than in its precursor, the basophilic erythroblast. The cytoplasm is beginning to acquire hemoglobin and thus is no longer a purely basophilic, but takes on acidophilic aspects, which becomes progressively more marked as the cell matures. The chromatin of the nucleus is arranged in coarse, deeply staining clumps. This cell is CD71-positive and lacks hematopoeitic lineage markers. ISBN:0721601464 intermediate erythroblast ISBN:0721601464 intermediate normoblast ISBN:0721601464 polychromatic erythroblast ISBN:0721601464 polychromatic normoblast ISBN:0721601464 polychromatophilic normoblast ISBN:0721601464 rubricyte ISBN:0721601464 CL:0000552 The final stage of the nucleated, immature erythrocyte, before nuclear loss. Typically the cytoplasm is described as acidophilic, but it still shows a faint polychromatic tint. The nucleus is small and initially may still have coarse, clumped chromatin, as in its precursor, the polychromatophilic erythroblast, but ultimately it becomes pyknotic, and appears as a deeply staining, blue-black, homogeneous structureless mass. The nucleus is often eccentric and sometimes lobulated. FMA:84646 acidophilic erythroblast eosinophilic erythroblast late erythoblast orthochromatic normoblast pyknotic eto enrythroblast orthochromatic erythroblast The final stage of the nucleated, immature erythrocyte, before nuclear loss. Typically the cytoplasm is described as acidophilic, but it still shows a faint polychromatic tint. The nucleus is small and initially may still have coarse, clumped chromatin, as in its precursor, the polychromatophilic erythroblast, but ultimately it becomes pyknotic, and appears as a deeply staining, blue-black, homogeneous structureless mass. The nucleus is often eccentric and sometimes lobulated. ISBN:0721601464 acidophilic erythroblast ISBN:0721601464 eosinophilic erythroblast ISBN:0721601464 orthochromatic normoblast ISBN:0721601464 pyknotic eto enrythroblast ISBN:0721601464 CL:0000553 The earliest cytologically identifiable precursor in the thrombocytic series. This cell is capable of endomitosis and lacks expression of hematopoieitic lineage markers (lin-negative). BTO:0001164 CALOHA:TS-0610 FMA:84235 MESH:D055016 CFU-Meg Meg-CFC MkP colony-forming unit-megakaryocyte megacaryoblast megacaryocyte progenitor cell megakaryoblast megakaryocytic progenitor cell promegacaryocyte promegakaryocyte Lineage negative is described here as CD2-negative, CD3-negative, CD4-negative, CD5-negative, CD8a-negative, CD14-negative, CD19-negative, CD20-negative, CD56-negative, Ly6g-negative, and Ter119-negative. megakaryocyte progenitor cell The earliest cytologically identifiable precursor in the thrombocytic series. This cell is capable of endomitosis and lacks expression of hematopoieitic lineage markers (lin-negative). GOC:dsd GOC:tfm ISBN:0721601464 CFU-Meg PMID:11722431 PMID:12482498 Meg-CFC PMCID:PMC1794060 MkP PMID:21116988 megakaryocytic progenitor cell PMID:12482498 CL:0000556 A large hematopoietic cell (50 to 100 micron) with a lobated nucleus. Once mature, this cell undergoes multiple rounds of endomitosis and cytoplasmic restructuring to allow platelet formation and release. BTO:0000843 CALOHA:TS-0611 FMA:83555 megacaryocyte megalocaryocyte megalokaryocyte Megakaryocytes are reportedly CD181-positive and CD182-positive. megakaryocyte A large hematopoietic cell (50 to 100 micron) with a lobated nucleus. Once mature, this cell undergoes multiple rounds of endomitosis and cytoplasmic restructuring to allow platelet formation and release. ISBN:0721601464 MESH:D008533 PMID:31043076 http://en.wikipedia.org/wiki/Megakaryocyte CL:0000558 An immature erythrocyte that changes the protein composition of its plasma membrane by exosome formation and extrusion. The types of protein removed differ between species though removal of the transferrin receptor is apparent in mammals and birds. BTO:0001173 CALOHA:TS-0864 MESH:D012156 reticulocyte An immature erythrocyte that changes the protein composition of its plasma membrane by exosome formation and extrusion. The types of protein removed differ between species though removal of the transferrin receptor is apparent in mammals and birds. GOC:add GOC:tfm PMID:15946868 PMID:2037622 CL:0000562 An erythrocyte having a nucleus. RBC red blood cell nucleate erythrocyte An erythrocyte having a nucleus. GOC:add GOc:tfm CL:0000566 A mesenchymal stem cell capable of developing into blood vessel endothelium. angioblast chondroplast These cells are reportedly CD31-positive, CD34-positive, CD144-positive, CD309-positive, and TAL1-positive. angioblastic mesenchymal cell A mesenchymal stem cell capable of developing into blood vessel endothelium. GOC:dsd GOC:tfm PMID:12768659 CL:0000569 A mesenchymal cell found in the developing heart and that develops into some part of the heart. These cells derive from intra- and extra-cardiac sources, including the endocardium, epicardium, neural crest, and second heart field. cardiac mesenchymal cell A mesenchymal cell found in the developing heart and that develops into some part of the heart. These cells derive from intra- and extra-cardiac sources, including the endocardium, epicardium, neural crest, and second heart field. PMID:18816864 CL:0000573 One of the two photoreceptor cell types in the vertebrate retina. In cones the photopigment is in invaginations of the cell membrane of the outer segment. Cones are less sensitive to light than rods, but they provide vision with higher spatial and temporal acuity, and the combination of signals from cones with different pigments allows color vision. BTO:0001036 CALOHA:TS-0866 FMA:67748 cone retinal cone cell One of the two photoreceptor cell types in the vertebrate retina. In cones the photopigment is in invaginations of the cell membrane of the outer segment. Cones are less sensitive to light than rods, but they provide vision with higher spatial and temporal acuity, and the combination of signals from cones with different pigments allows color vision. MESH:D017949 cone doi:10.1038/s41598-020-66092-9 CL:0000575 An epithelial cell of the cornea. BTO:0004298 CALOHA:TS-0173 FMA:70551 epithelial cell of cornea corneal epithelial cell An epithelial cell of the cornea. GOC:tfm epithelial cell of cornea FMA:70551 CL:0000586 The reproductive cell in multicellular organisms. BTO:0000535 NCIT:C12597 VHOG:0001534 WBbt:0006796 germ cell The reproductive cell in multicellular organisms. MESH:D005854 CL:0000593 A steroid hormone secreting cell that secretes androgen. androgen secreting cell A steroid hormone secreting cell that secretes androgen. GOC:tfm CL:0000595 An erythrocyte lacking a nucleus. red blood cell enucleate erythrocyte An erythrocyte lacking a nucleus. GOC:add GOC:tfm CL:0000598 Pyramidal neurons have a pyramid-shaped soma with a single axon, a large apical dendrite and multiple basal dendrites. The apex and an apical dendrite typically point toward the pial surface and other dendrites and an axon emerging from the base. The axons may have local collaterals but also project outside their region. Pyramidal neurons are found in the cerebral cortex, the hippocampus, and the amygdala. BTO:0003102 FMA:67310 FMA:86775 NIFSTD:sao862606388 projection neuron pyramidal cell pyramidal neuron Pyramidal neurons have a pyramid-shaped soma with a single axon, a large apical dendrite and multiple basal dendrites. The apex and an apical dendrite typically point toward the pial surface and other dendrites and an axon emerging from the base. The axons may have local collaterals but also project outside their region. Pyramidal neurons are found in the cerebral cortex, the hippocampus, and the amygdala. GOC:tfm MESH:D017966 CL:0000604 One of the two photoreceptor cell types of the vertebrate retina. In rods the photopigment is in stacks of membranous disks separate from the outer cell membrane. Rods are more sensitive to light than cones, but rod mediated vision has less spatial and temporal resolution than cone vision. BTO:0001024 CALOHA:TS-0870 FMA:67747 rod retinal rod cell One of the two photoreceptor cell types of the vertebrate retina. In rods the photopigment is in stacks of membranous disks separate from the outer cell membrane. Rods are more sensitive to light than cones, but rod mediated vision has less spatial and temporal resolution than cone vision. MESH:D017948 rod doi:10.1038/s41598-020-66092-9 CL:0000622 A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus). FMA:83625 MESH:D061354 https://cellxgene.cziscience.com/cellguide/CL_0000622 acinic cell acinous cell acinar cell A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus). GOC:tfm http://www.copewithcytokines.de CL:0000630 A cell whose primary function is to support other cell types. BTO:0002315 supportive cell supporting cell A cell whose primary function is to support other cell types. FB:ma GOC:tfm CL:0000666 An endothelial cell that has small pores, or fenestrations, which allow for the efficient exchange of substances between the blood and surrounding tissues. https://cellxgene.cziscience.com/cellguide/CL_0000666 window cell fenestrated endothelial cell An endothelial cell that has small pores, or fenestrations, which allow for the efficient exchange of substances between the blood and surrounding tissues. DOI:10.1007/978-3-211-99390-3_133 CL:0000667 An extracellular matrix secreting cell that secretes collagen. collagen secreting cell An extracellular matrix secreting cell that secretes collagen. GOC:tfm CL:0000670 A primordial germ cell is a diploid germ cell precursors that transiently exist in the embryo before they enter into close association with the somatic cells of the gonad and become irreversibly committed as germ cells. FMA:70567 gonocyte primitive germ cell primordial germ cell A primordial germ cell is a diploid germ cell precursors that transiently exist in the embryo before they enter into close association with the somatic cells of the gonad and become irreversibly committed as germ cells. GOC:tfm PMID:1381289 CL:0000675 A mature sexual reproductive cell of the female germline. female gamete A mature sexual reproductive cell of the female germline. GOC:tfm CL:0000680 A non-terminally differentiated cell that is capable of developing into a muscle cell. muscle precursor cell A non-terminally differentiated cell that is capable of developing into a muscle cell. GOC:add CL:0000691 Any interneuron that has characteristic some stellate morphology. stellate interneuron Any interneuron that has characteristic some stellate morphology. FBC:Autogenerated CL:0000693 An interneuron that has spider-like appearance with a small round soma, a large number (7-10) of short, smooth, or slightly beaded primary dendrites that give rise to only a few secondary branches, and a branched axon that establishes a dense axonal mesh with thin shafts. NGF cell neuroglioform cell spiderweb cell neurogliaform cell An interneuron that has spider-like appearance with a small round soma, a large number (7-10) of short, smooth, or slightly beaded primary dendrites that give rise to only a few secondary branches, and a branched axon that establishes a dense axonal mesh with thin shafts. JB:jb PMID:17122314 NGF cell PMID:18568015 neuroglioform cell PMID:3235828 CL:0000696 A cell that stores and secretes pancreatic polypeptide hormone. FMA:62938 FMA:83409 https://cellxgene.cziscience.com/cellguide/CL_0000696 type F enteroendocrine cell PP cell A cell that stores and secretes pancreatic polypeptide hormone. GOC:tfm JB:jb PMID:15153415 CL:0000710 Epithelial cells derived from neural plate and neural crest. neuroepithelial cell BTO:0004301 FMA:70557 The term "neuroepithelial cell" is used to describe both this cell type and sensory epithelial cell (CL:0000098). neurecto-epithelial cell Epithelial cells derived from neural plate and neural crest. GOC:tfm CL:0000723 A stem cell that can give rise to cell types of the body other than those of the germ-line. CALOHA:TS-2086 MESH:D053687 somatic stem cell A stem cell that can give rise to cell types of the body other than those of the germ-line. GO:0048103 CL:0000737 Muscle cell which has as its direct parts myofilaments organized into sarcomeres. BTO:0002916 CALOHA:TS-2157 FMA:86936 striated muscle cell Muscle cell which has as its direct parts myofilaments organized into sarcomeres. GOC:tfm ISBN:0721662544 CL:0000738 An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue. BTO:0000751 CALOHA:TS-0549 FMA:62852 MESH:D007962 NCIT:C12529 leucocyte white blood cell immune cell leukocyte An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue. GOC:add GOC:tfm ISBN:978-0-323-05290-0 CL:0000740 The set of neurons that receives neural inputs via bipolar, horizontal and amacrine cells. The axons of these cells make up the optic nerve. BTO:0001800 FMA:67765 MESH:D012165 gangliocyte ganglion cell of retina retinal ganglion cell The set of neurons that receives neural inputs via bipolar, horizontal and amacrine cells. The axons of these cells make up the optic nerve. GOC:dph CL:0000746 Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. In mammals, the contractile fiber resembles those of skeletal muscle but are only one third as large in diameter, are richer in sarcoplasm, and contain centrally located instead of peripheral nuclei. cardiocyte BTO:0001539 CALOHA:TS-0115 FMA:14067 MESH:D032383 https://cellxgene.cziscience.com/cellguide/CL_0000746 cardiac muscle fiber cardiac myocyte cardiomyocyte heart muscle cell This class encompasses the muscle cells responsible for heart* contraction in both vertebrates and arthropods. The ultrastucture of a wide range of arthropod heart cells has been examined including spiders, horseshoe crabs, crustaceans (see Sherman, 1973 and refs therein) and insects (see Lehmacher et al (2012) and refs therein). According to these refs, the cells participating in heart contraction in all cases are transversely striated. Insects hearts additionally contain ostial cells, also transversely striated muscle cells, but which do not participate in heart contraction. cardiac muscle cell Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. In mammals, the contractile fiber resembles those of skeletal muscle but are only one third as large in diameter, are richer in sarcoplasm, and contain centrally located instead of peripheral nuclei. GOC:mtg_cardiacconduct_nov11 GOC:tfm ISBN:0323052908 PMID:22426062 PMID:4711263 cardiac muscle fiber GO:0048739 CL:0000763 A cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage. BTO:0001441 CALOHA:TS-0647 MESH:D022423 myeloid cell A cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage. GOC:add CL:0000764 A immature or mature cell in the lineage leading to and including erythrocytes. CALOHA:TS-0290 FMA:62845 FMA:83516 erythropoietic cell Note that in FMA erythropoietic cells are types of nucleated erythrocytes and thus don't include erythrocytes. erythroid lineage cell A immature or mature cell in the lineage leading to and including erythrocytes. GOC:add GOC:tfm CL:0000765 A nucleated precursor of an erythrocyte that lacks hematopoietic lineage markers. BTO:0001571 CALOHA:TS-0289 FMA:83504 MESH:D004900 normoblast erythroblast A nucleated precursor of an erythrocyte that lacks hematopoietic lineage markers. GOC:add ISBN:0721601464 PMID:18174176 CL:0000766 A cell of the monocyte, granulocyte, or mast cell lineage. myeloid leukocyte A cell of the monocyte, granulocyte, or mast cell lineage. GOC:add CL:0000837 A hematopoietic multipotent progenitor cell is multipotent, but not capable of long-term self-renewal. These cells are characterized as lacking lineage cell surface markers and being CD34-positive in both mice and humans. BTO:0000725 CALOHA:TS-0448 MPP hemopoietic progenitor cell Markers differ between mouse and human. hematopoietic multipotent progenitor cell A hematopoietic multipotent progenitor cell is multipotent, but not capable of long-term self-renewal. These cells are characterized as lacking lineage cell surface markers and being CD34-positive in both mice and humans. GOC:add GOC:tfm PMID:19022770 CL:0000838 A progenitor cell restricted to the lymphoid lineage. lymphoid progenitor cell BTO:0004731 CALOHA:TS-2025 FMA:70338 Note that this is a class of cell types, not an identified single cell type. lymphoid lineage restricted progenitor cell A progenitor cell restricted to the lymphoid lineage. GOC:add GOC:tfm CL:0000839 A progenitor cell restricted to the myeloid lineage. myeloid progenitor cell BTO:0004730 CALOHA:TS-2099 FMA:70339 Note that this is a class of cell types, not an identified single cell type. myeloid lineage restricted progenitor cell A progenitor cell restricted to the myeloid lineage. GOC:add GOC:tfm PMID:19022770 CL:0000842 A leukocyte with a single non-segmented nucleus in the mature form. BTO:0000878 CALOHA:TS-0768 FMA:86713 mononuclear cell peripheral blood mononuclear cell mononuclear leukocyte A leukocyte with a single non-segmented nucleus in the mature form. GOC:add CL:0000850 A neuron that releases serotonin as a neurotransmitter. MESH:D059326 WBbt:0006837 5-HT neuron 5-hydroxytryptamine neuron serotinergic neuron serotonergic neuron A neuron that releases serotonin as a neurotransmitter. SANBI:mhl CL:0000988 A cell of a hematopoietic lineage. BTO:0000574 CALOHA:TS-2017 FMA:70366 FMA:83598 haematopoietic cell haemopoietic cell hemopoietic cell hematopoietic cell A cell of a hematopoietic lineage. GOC:add GO_REF:0000031 CL:0001035 A connective tissue cell found in bone. 2011-11-16T04:28:16Z https://cellxgene.cziscience.com/cellguide/CL_0001035 bone cell A connective tissue cell found in bone. GOC:add GO_REF:0000034 CL:0001060 A hematopoietic oligopotent progenitor cell that has the ability to differentiate into limited cell types but lacks lineage cell markers and self renewal capabilities. Cell lacks hematopoeitic lineage markers. 2010-01-06T03:43:27Z hematopoietic oligopotent progenitor cell, lineage-negative A hematopoietic oligopotent progenitor cell that has the ability to differentiate into limited cell types but lacks lineage cell markers and self renewal capabilities. Cell lacks hematopoeitic lineage markers. GOC:tfm PMID:19022770 CL:0001061 A cell found in an organism or derived from an organism exhibiting a phenotype that deviates from the expected phenotype of any native cell type of that organism. Abnormal cells are typically found in disease states or disease models. 2017-01-30T18:53:32Z https://ncit.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C12913 https://github.com/obophenotype/cell-ontology/issues/448 abnormal cell A cell found in an organism or derived from an organism exhibiting a phenotype that deviates from the expected phenotype of any native cell type of that organism. Abnormal cells are typically found in disease states or disease models. GOC:add GOC:cg GOC:wdd CL:0001063 An abnormal cell exhibiting dysregulation of cell proliferation or programmed cell death and capable of forming a neoplasm, an aggregate of cells in the form of a tumor mass or an excess number of abnormal cells (liquid tumor) within an organism. 2017-01-30T19:16:26Z https://ncit.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C12922 tumor cell tumour cell https://github.com/obophenotype/cell-ontology/issues/448 neoplastic cell An abnormal cell exhibiting dysregulation of cell proliferation or programmed cell death and capable of forming a neoplasm, an aggregate of cells in the form of a tumor mass or an excess number of abnormal cells (liquid tumor) within an organism. GOC:add GOC:cg GOC:wdd CL:0001064 A neoplastic cell that is capable of entering a surrounding tissue 2017-01-30T19:39:12Z https://ncit.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C12917 cancer cell https://github.com/obophenotype/cell-ontology/issues/448 malignant cell A neoplastic cell that is capable of entering a surrounding tissue GOC:add GOC:cg GOC:wdd CL:0001066 A progenitor cell committed to the erythroid lineage. This cell is ter119-positive but lacks expression of other hematopoietic lineage markers (lin-negative). BTO:0004911 blast forming unit erythroid burst forming unit erythroid colony forming unit erythroid erythroid stem cell erythroid progenitor cell, mammalian A progenitor cell committed to the erythroid lineage. This cell is ter119-positive but lacks expression of other hematopoietic lineage markers (lin-negative). GOC:add ISBN:0721601464 CL:0002031 A hematopoietic progenitor cell that is capable of developing into only one lineage of hematopoietic cells. 2010-01-06T03:43:20Z hematopoietic lineage restricted progenitor cell A hematopoietic progenitor cell that is capable of developing into only one lineage of hematopoietic cells. GOC:tfm PMID:19022770 CL:0002032 A hematopoietic oligopotent progenitor cell that has the ability to differentiate into limited cell types but lacks lineage cell markers and self renewal capabilities. 2010-01-06T03:43:27Z This cell type is intended to be compatible with any vertebrate hematopoietic oligopotent progenitor cell. For mammalian hematopoietic oligopotent progenitor cells known to be lineage-negative, please use the term 'hematopoietic oligopotent progenitor cell' (CL_0001060). hematopoietic oligopotent progenitor cell A hematopoietic oligopotent progenitor cell that has the ability to differentiate into limited cell types but lacks lineage cell markers and self renewal capabilities. GOC:tfm PMID:19022770 https://orcid.org/0000-0001-5208-3432 CL:0002067 An enteroendocrine cell that produces glucagon. 2010-09-10T10:48:54Z FMA:62939 https://cellxgene.cziscience.com/cellguide/CL_0002067 type A enteroendocrine cell An enteroendocrine cell that produces glucagon. GOC:tfm ISBN:0412046911 CL:0002068 Specialized cardiac myocyte that is subendocardially interspersed with the regular cardiac muscle cell. They are uninucleate cylindrical cells, associated end-to-end in long rows, continue from the node to the atrioventricular bundle; relatively short compared to ordinary myocytes but are nearly twice their diameter. 2010-06-28T08:36:15Z BTO:0001032 FMA:14146 Purkinje cell fiber Purkinje muscle cell myocytus conducens cardiacus Purkinje myocyte Specialized cardiac myocyte that is subendocardially interspersed with the regular cardiac muscle cell. They are uninucleate cylindrical cells, associated end-to-end in long rows, continue from the node to the atrioventricular bundle; relatively short compared to ordinary myocytes but are nearly twice their diameter. FMA:0412046911 GOC:tfm PMID:19939742 CL:0002072 A specialized cardiac myocyte in the sinoatrial and atrioventricular nodes. The cell is slender and fusiform confined to the nodal center, circumferentially arranged around the nodal artery. 2010-06-29T11:41:37Z pacemaker cell BTO:0004190 FMA:67101 P cell cardiac pacemaker cell myocytus nodalis nodal myocyte A specialized cardiac myocyte in the sinoatrial and atrioventricular nodes. The cell is slender and fusiform confined to the nodal center, circumferentially arranged around the nodal artery. FMA:67101 GOC:tfm cardiac pacemaker cell GOC:pr CL:0002073 Specialized cardiac myocyte which is in the internodal tract and atrioventricular node. The cell is more slender than ordinary atrial myocytes and has more myofibrils than nodal myocytes. 2010-06-29T02:39:32Z FMA:67142 transitional myocyte Specialized cardiac myocyte which is in the internodal tract and atrioventricular node. The cell is more slender than ordinary atrial myocytes and has more myofibrils than nodal myocytes. FMA:67142 GOC:tfm CL:0002074 The myoendocrine cellis a specialized myocyte localized mainly in the right and left atrial appendages, and also scattered within other areas of the atria and along the conductive system in the ventricular septum. The most conspicuous feature distinguishing myoendocrine cells from other atrial myoctyes is the presence of membane-bounded secretory granules (these granules contain precursor of cardiodilatins or atrial natriuretic polypeptides). 2010-06-29T11:50:47Z FMA:67111 myocardial endocrine cell The myoendocrine cellis a specialized myocyte localized mainly in the right and left atrial appendages, and also scattered within other areas of the atria and along the conductive system in the ventricular septum. The most conspicuous feature distinguishing myoendocrine cells from other atrial myoctyes is the presence of membane-bounded secretory granules (these granules contain precursor of cardiodilatins or atrial natriuretic polypeptides). FMA:67111 GOC:tfm CL:0002076 An epithelial cell derived from endoderm. 2010-06-29T03:38:14Z FMA:69075 endo-epithelial cell An epithelial cell derived from endoderm. FMA:69075 GOC:tfm CL:0002077 An epithelial cell derived from ectoderm. 2010-06-29T03:38:22Z FMA:69074 ecto-epithelial cell An epithelial cell derived from ectoderm. FMA:69074 GOC:tfm CL:0002078 Epithelial cell derived from mesoderm or mesenchyme. 2010-06-29T03:49:14Z FMA:69076 epithelial mesenchymal cell meso-epithelial cell Epithelial cell derived from mesoderm or mesenchyme. FMA:69076 GOC:tfm CL:0002086 A cardiac myocyte that is an excitable cells in the myocardium, specifically in the conducting system of heart. 2010-07-21T01:33:38Z FMA:67968 specialized cardiac myocyte A cardiac myocyte that is an excitable cells in the myocardium, specifically in the conducting system of heart. FMA:67968 GOC:tfm CL:0002087 A leukocyte that lacks granules. 2010-07-22T11:30:33Z FMA:62855 agranular leukocyte nongranular leukocyte A leukocyte that lacks granules. GOC:tfm CL:0002092 A cell found in the bone marrow. This can include fibroblasts, macrophages, adipocytes, osteoblasts, osteoclasts, endothelial cells and hematopoietic cells. 2010-07-22T04:48:15Z BTO:0004850 FMA:83621 MESH:D001854 MH consider whether bone marrow cells are bone cells in the structural sense vs. being part of bone organ sense. bone marrow cell A cell found in the bone marrow. This can include fibroblasts, macrophages, adipocytes, osteoblasts, osteoclasts, endothelial cells and hematopoietic cells. GOC:tfm ISBN:0618947256 CL:0002095 A cell in the hilum of the ovary that produces androgens. 2010-08-23T11:18:18Z FMA:18710 hilar cell of ovary hilus cell of ovary A cell in the hilum of the ovary that produces androgens. GOC:tfm ISBN:068340007X CL:0002132 A stomal cell of the ovary 2010-08-23T12:10:31Z FMA:72299 ovarian stromal cell stromal cell of ovary A stomal cell of the ovary GOC:tfm ovarian stromal cell GOC:cjm CL:0002139 An endothelial cell of the vascular tree, which includes blood vessels and lymphatic vessels. 2010-08-24T02:06:40Z BTO:0001854 CALOHA:TS-1106 FMA:67755 https://cellxgene.cziscience.com/cellguide/CL_0002139 vascular endothelial cell cubodial endothelial cell of vascular tree These cells are reportedly CD31-positive, CD34-positive, CD144-positive, TAL1-positive. endothelial cell of vascular tree An endothelial cell of the vascular tree, which includes blood vessels and lymphatic vessels. GOC:dsd GOC:tfm PMID:12768659 CL:0002144 An endothelial cell found in capillaries. 2010-08-24T10:15:00Z BTO:0004956 CALOHA:TS-0112 FMA:67756 capillary endothelial cell An endothelial cell found in capillaries. GOC:tfm CL:0002145 A multi-ciliated epithelial cell located in the trachea and bronchi, characterized by a columnar shape and motile cilia on its apical surface. These cilia facilitate mucociliary clearance by moving mucus and trapped particles toward the pharynx. 2010-08-24T03:38:29Z FMA:70542 https://cellxgene.cziscience.com/cellguide/CL_0002145 ciliated columnar cell of tracheobronchial tree The marker set C1orf194, MS4A8 can identify the Human cell type ciliated columnar cell of tracheobronchial tree in the Lung with a confidence of 0.86 (NS-Forest FBeta value). These cells possess numerous cilia on their surface, typically ranging from 200 to 300 per cell. The cilia vary in length, measuring between 6 to 7 μm in the upper airways (trachea) and becoming shorter, around 4 μm, in the smaller airways (terminal bronchioles). These cells form a two-layered 'coat' in the airway: the lower 'sol' layer is watery, allowing the cilia to beat in coordinated waves, while the upper 'gel' layer is thick and sticky, trapping inhaled particles. multiciliated columnar cell of tracheobronchial tree A multi-ciliated epithelial cell located in the trachea and bronchi, characterized by a columnar shape and motile cilia on its apical surface. These cilia facilitate mucociliary clearance by moving mucus and trapped particles toward the pharynx. GOC:tfm PMID:28400610 The marker set C1orf194, MS4A8 can identify the Human cell type ciliated columnar cell of tracheobronchial tree in the Lung with a confidence of 0.86 (NS-Forest FBeta value). https://doi.org/10.5281/zenodo.11165918 These cells possess numerous cilia on their surface, typically ranging from 200 to 300 per cell. The cilia vary in length, measuring between 6 to 7 μm in the upper airways (trachea) and becoming shorter, around 4 μm, in the smaller airways (terminal bronchioles). These cells form a two-layered 'coat' in the airway: the lower 'sol' layer is watery, allowing the cilia to beat in coordinated waves, while the upper 'gel' layer is thick and sticky, trapping inhaled particles. PMID:25386990 CL:0002159 Epithelial cells derived from general body ectoderm and ectoderm placodes. 2010-08-26T08:31:08Z FMA:70556 general ecto-epithelial cell Epithelial cells derived from general body ectoderm and ectoderm placodes. GOC:tfm CL:0002178 An epithelial cell found in the lining of the stomach. 2010-08-25T03:22:08Z FMA:62948 epithelial cell of stomach An epithelial cell found in the lining of the stomach. GOC:tfm CL:0002183 A stomach epithelial cell that is olumnar in form with a few short apical microvilli; relatively undifferentiated mitotic cell from which other types of gland are derived; few in number, situated in the isthmus region of the gland and base of the gastric pit. 2010-08-25T03:57:08Z FMA:62953 stem cell of gastric gland A stomach epithelial cell that is olumnar in form with a few short apical microvilli; relatively undifferentiated mitotic cell from which other types of gland are derived; few in number, situated in the isthmus region of the gland and base of the gastric pit. GOC:tfm ISBN:0517223651 CL:0002202 An epithelial cell of the tracheobronchial tree. 2010-09-02T02:09:14Z FMA:66816 epithelial cell of tracheobronchial tree An epithelial cell of the tracheobronchial tree. GOC:tfm CL:0002209 An epithelial cell present in the trachea and bronchi; columnar in shape; generally lack cilia; immature forms of ciliated or secretory cells which have been formed from stem cells. 2010-09-02T02:53:59Z FMA:69060 undifferentiated columnar cell of tracheobronchial tree intermediate epitheliocyte An epithelial cell present in the trachea and bronchi; columnar in shape; generally lack cilia; immature forms of ciliated or secretory cells which have been formed from stem cells. GOC:tfm ISBN:0517223651 CL:0002222 A cell comprising the transparent, biconvex body separating the posterior chamber and vitreous body, and constituting part of the refracting mechanism of the mammalian eye. 2010-09-07T10:38:03Z FMA:70950 vertebrate lens cell A cell comprising the transparent, biconvex body separating the posterior chamber and vitreous body, and constituting part of the refracting mechanism of the mammalian eye. GOC:tfm ISBN:0721662544 CL:0002224 A cell of the cuboidal epithelium that covers the lens. The cells of the lens epithelium regulate most of the homeostatic functions of the lens. As ions, nutrients, and liquid enter the lens from the aqueous humor, Na+/K+ ATPase pumps in the lens epithelial cells pump ions out of the lens to maintain appropriate lens osmolarity and volume, with equatorially positioned lens epithelium cells contributing most to this current. The activity of the Na+/K+ ATPases keeps water and current flowing through the lens from the poles and exiting through the equatorial regions. The cells of the lens epithelium also serve as the progenitors for new lens fibers. It constantly lays down fibers in the embryo, fetus, infant, and adult, and continues to lay down fibers for lifelong growth. 2010-09-07T10:45:47Z FMA:67559 lens epithelial cell A cell of the cuboidal epithelium that covers the lens. The cells of the lens epithelium regulate most of the homeostatic functions of the lens. As ions, nutrients, and liquid enter the lens from the aqueous humor, Na+/K+ ATPase pumps in the lens epithelial cells pump ions out of the lens to maintain appropriate lens osmolarity and volume, with equatorially positioned lens epithelium cells contributing most to this current. The activity of the Na+/K+ ATPases keeps water and current flowing through the lens from the poles and exiting through the equatorial regions. The cells of the lens epithelium also serve as the progenitors for new lens fibers. It constantly lays down fibers in the embryo, fetus, infant, and adult, and continues to lay down fibers for lifelong growth. GOC:tfm ISBN:0721662544 http://en.wikipedia.org/wiki/Lens_%28anatomy%29#Lens_epithelium CL:0002240 A fibroblast in the bone marrow. 2010-09-07T02:25:18Z FMA:84377 marrow fibroblast A fibroblast in the bone marrow. GOC:tfm CL:0002242 A cell containing at least one nucleus. 2010-09-07T03:32:33Z FMA:67513 nucleate cell A cell containing at least one nucleus. GOC:tfm CL:0002246 A hematopoeitic stem cell found in the blood. Normally found in very limited numbers in the peripheral circulation (less than 0.1% of all nucleated cells). 2010-09-07T03:57:09Z BTO:0002669 FMA:86711 MESH:D000072916 PBSC peripheral blood stem cell A hematopoeitic stem cell found in the blood. Normally found in very limited numbers in the peripheral circulation (less than 0.1% of all nucleated cells). GOC:tfm CL:0002251 An epithelial cell of the musculomembranous digestive tube extending from the mouth to the anus. 2010-09-08T09:26:53Z epithelial cell of alimentary canal An epithelial cell of the musculomembranous digestive tube extending from the mouth to the anus. GOC:tfm ISBN:0721662544 CL:0002252 An epithelial cell of the lining of the esophagus. 2010-09-08T09:28:20Z FMA:63071 epithelial cell of esophagus An epithelial cell of the lining of the esophagus. GOC:tfm CL:0002262 An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver. 2010-09-14T10:57:26Z FMA:63134 https://cellxgene.cziscience.com/cellguide/CL_0002262 endothelial cell of sinusoid An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver. GOC:tfm ISBN:0618947256 CL:0002264 A type of enteroendocrine cell found in the stomach that secretes glucagon. 2010-09-10T10:54:42Z FMA:83411 type A cell of stomach A type of enteroendocrine cell found in the stomach that secretes glucagon. GOC:tfm CL:0002308 An epithelial cell of a skin gland. 2010-09-14T12:00:07Z FMA:70657 epithelial cell of gland of skin epithelial cell of skin gland An epithelial cell of a skin gland. GOC:tfm CL:0002319 A cell that is part of the nervous system. 2010-09-15T01:34:57Z CALOHA:TS-2040 FMA:70333 neural cell A cell that is part of the nervous system. GOC:tfm ISBN:0618947256 CL:0002320 A cell of the supporting or framework tissue of the body, arising chiefly from the embryonic mesoderm and including adipose tissue, cartilage, and bone. 2010-09-15T03:01:54Z CALOHA:TS-2096 FMA:63875 MESH:D003239 connective tissue cell A cell of the supporting or framework tissue of the body, arising chiefly from the embryonic mesoderm and including adipose tissue, cartilage, and bone. GOC:tfm ISBN:0618947256 CL:0002321 A cell of the embryo. 2010-09-15T03:39:21Z CALOHA:TS-0263 FMA:82840 WBbt:0007028 https://cellxgene.cziscience.com/cellguide/CL_0002321 embryonic cell (metazoa) A cell of the embryo. FMA:0618947256 CL:0002328 An epithelial cell of the bronchus. 2010-09-20T02:00:00Z BTO:0002922 bronchial epithelial cell An epithelial cell of the bronchus. GOC:tfm CL:0002332 A multi-ciliated epithelial cell located in the bronchus epithelium, characterized by a columnar shape and motile cilia on its apical surface. 2010-09-20T02:21:12Z ciliated epithelial cell of the bronchus multiciliated epithelial cell of the bronchus A multi-ciliated epithelial cell located in the bronchus epithelium, characterized by a columnar shape and motile cilia on its apical surface. GOC:tfm PMID:18757316 CL:0002333 An adipocyte derived from a neural crest cell. 2010-09-20T02:25:25Z neural crest derived adipocyte An adipocyte derived from a neural crest cell. GOC:tfm PMID:17507398 CL:0002350 An endothelial cell that lines the intracavitary lumen of the heart, separating the circulating blood from the underlying myocardium. This cell type releases a number of vasoactive substances including prostacyclin, nitrous oxide and endothelin. 2010-09-21T04:33:05Z FMA:75621 https://cellxgene.cziscience.com/cellguide/CL_0002350 endocardial endothelial cell endothelial cell of endocardium endocardial cell An endothelial cell that lines the intracavitary lumen of the heart, separating the circulating blood from the underlying myocardium. This cell type releases a number of vasoactive substances including prostacyclin, nitrous oxide and endothelin. GOC:tfm ISSN:0452-3458 endothelial cell of endocardium FMA:75621 CL:0002352 A hematopoietic stem cell that exists during embryogenesis. 2010-09-22T09:05:13Z gestational hematopoietic stem cell A hematopoietic stem cell that exists during embryogenesis. GOC:tfm ISBN:978-60327-246-6 CL:0002363 A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic morphology; located between the lamellae with a large flattened nucleus, and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratan sulfate. 2010-09-22T01:57:40Z corneal fibroblast corneal keratocyte keratocyte A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic morphology; located between the lamellae with a large flattened nucleus, and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratan sulfate. GOC:tfm ISBN:9780702029585 CL:0002368 An epithelial cell of the respiratory tract epithelium. These cells have an endodermal origin. 2010-09-23T04:38:49Z BTO:0004533 airway epithelial cell respiratory epithelial cell respiratory tract epithelial cell An epithelial cell of the respiratory tract epithelium. These cells have an endodermal origin. GOC:tfm CL:0002372 A transversely striated, multinucleated syncytial muscle cell, formed by the fusion of myoblasts during muscle development. 2010-09-24T01:13:01Z myofiber myofibril myotube A transversely striated, multinucleated syncytial muscle cell, formed by the fusion of myoblasts during muscle development. GOC:dos GOC:tfm ISBN:0323052908 PMID:22274696 myofiber FBbt:00005812 myofibril FBbt:00005812 CL:0002375 A multipotent progenitor cell that develops from a migratory neural crest cell. The schwann cell precursor is embedded among axons, with minimal extracellular space separating them from nerve cell membranes. This cell lacks a basal lamina, which distinguishes it from more mature Schwann cells. In rodents, cadherin-19 (Cdh19) serves as a specific marker for this developmental stage. 2010-09-24T02:06:10Z Schwann cell precursor cell Schwann cell precursor are capable of differentiating into Schwann cells and other cell types such as melanocytes, neurons, and mesenchymal cells. Schwann cell precursor A multipotent progenitor cell that develops from a migratory neural crest cell. The schwann cell precursor is embedded among axons, with minimal extracellular space separating them from nerve cell membranes. This cell lacks a basal lamina, which distinguishes it from more mature Schwann cells. In rodents, cadherin-19 (Cdh19) serves as a specific marker for this developmental stage. GOC:tfm PMID:15580626 PMID:30971890 PMID:35815410 Schwann cell precursor are capable of differentiating into Schwann cells and other cell types such as melanocytes, neurons, and mesenchymal cells. PMID:35815410 CL:0002377 A glial cell that develops from a Schwann cell precursor. The immature Schwann cell is embedded among neurons (axons) with minimal extracellular spaces separating them from nerve cell membranes and has a basal lamina. Cells can survive without an axon present. Immature Schwann cell can be found communally ensheathing large groups of axons. 2010-09-24T02:10:31Z Schwann cell immature Schwann cell A glial cell that develops from a Schwann cell precursor. The immature Schwann cell is embedded among neurons (axons) with minimal extracellular spaces separating them from nerve cell membranes and has a basal lamina. Cells can survive without an axon present. Immature Schwann cell can be found communally ensheathing large groups of axons. GOC:cvs GOC:tfm ISBN:0721662544 CL:0002421 A reticulocyte that retains the nucleus and other organelles. Found in birds, fish, amphibians and reptiles. 2010-10-15T09:24:05Z nucleated reticulocyte A reticulocyte that retains the nucleus and other organelles. Found in birds, fish, amphibians and reptiles. GOC:tfm PMID:18182572 PMID:9011180 PMID:9046052 CL:0002422 A reticulocyte lacking a nucleus and showing a basophilic reticulum under vital staining due to the presence of ribosomes. 2010-10-15T09:24:08Z CALOHA:TS-0864 FMA:66785 enucleated reticulocyte A reticulocyte lacking a nucleus and showing a basophilic reticulum under vital staining due to the presence of ribosomes. GOC:tfm ISBN:0-12203-052-4 ISBN:0721601464 CL:0002453 A progenitor cell of the central nervous system that can differentiate into oligodendrocytes or type-2 astrocytes. This cell originates from multiple structures within the developing brain including the medial ganglion eminence and the lateral ganglionic eminence. These cells migrate throughout the central nervous system and persist into adulthood where they play an important role in remyelination of injured neurons. 2010-11-10T02:51:34Z oligodendrocyte-type 2 astrocyte (O-2A) progenitor cell oligodendrocyte/type-2 astrocyte progenitor cell MESH:D000073637 oligodendrocyte precursor cell A progenitor cell of the central nervous system that can differentiate into oligodendrocytes or type-2 astrocytes. This cell originates from multiple structures within the developing brain including the medial ganglion eminence and the lateral ganglionic eminence. These cells migrate throughout the central nervous system and persist into adulthood where they play an important role in remyelination of injured neurons. GOC:tfm PMID:10704434 PMID:11756508 PMID:20142420 PMID:2182078 PMID:24133281 PMID:9826671 oligodendrocyte-type 2 astrocyte (O-2A) progenitor cell PMID:2253328 oligodendrocyte/type-2 astrocyte progenitor cell PMID:24133281 CL:0002494 A cell located in the heart, including both muscle and non muscle cells. 2010-12-07T09:37:22Z BTO:0001539 CALOHA:TS-0115 FMA:83808 FMA:84791 heart cell From Onard of the FMA: Cardiac muscle cell or cardiac myocyte is a striated muscle cell. Cardiocyte on the other hand is any cell in the heart which includes cells other than muscle cells (e.g. endothelial cell of endocardium). Unless there is a consensus among anatomists that cardiocytes refer only to muscle cells, we will treat them as a general class of cells in the heart. cardiocyte A cell located in the heart, including both muscle and non muscle cells. GOC:tfm CL:0002503 A cell of the adventitial layer of ductal structures such as the uterer, defent duct, biliary duct, etc 2010-12-07T04:03:56Z BTO:0002441 FMA:84639 adventitial cell A cell of the adventitial layer of ductal structures such as the uterer, defent duct, biliary duct, etc GOC:tfm CL:0002521 An adipocyte that is part of subcutaneous adipose tissue. 2011-02-21T02:51:22Z subcutaneous fat cell subcutaneous adipocyte An adipocyte that is part of subcutaneous adipose tissue. GOC:tfm CL:0002539 A smooth muscle cell of the aorta. 2011-02-28T01:42:12Z BTO:0004577 https://cellxgene.cziscience.com/cellguide/CL_0002539 aortic smooth muscle cell A smooth muscle cell of the aorta. GOC:tfm CL:0002540 A mesenchymal stem cell that is part of the bone marrow. 2011-02-28T01:47:47Z mesenchymal stem cell of the bone marrow A mesenchymal stem cell that is part of the bone marrow. GOC:tfm CL:0002543 An endothelial cell that is part of the vein. 2011-02-28T03:48:11Z FMA:62104 KUPO:0001099 https://cellxgene.cziscience.com/cellguide/CL_0002543 endothelial cell of vein venous endothelial cell vein endothelial cell An endothelial cell that is part of the vein. GOC:tfm CL:0002547 A fibroblast of the aortic adventitia. 2011-02-28T04:43:41Z fibroblast of the aortic adventitia A fibroblast of the aortic adventitia. GOC:tfm CL:0002548 A fibroblast that is part of the heart. 2011-02-28T04:57:44Z cardiac fibroblast fibroblast of cardiac tissue A fibroblast that is part of the heart. GOC:tfm CL:0002551 Any skin fibroblast that is part of some dermis. 2011-02-28T05:05:33Z fibroblast of dermis Any skin fibroblast that is part of some dermis. FBC:Autogenerated CL:0002553 A fibroblast that is part of lung. 2011-02-28T05:11:03Z BTO:0000764 CALOHA:TS-0575 fibroblast of lung A fibroblast that is part of lung. GOC:tfm CL:0002557 A fibroblast of pulmonary artery. 2011-02-28T05:22:27Z fibroblast of pulmonary artery A fibroblast of pulmonary artery. GOC:tfm CL:0002570 A mesenchymal stem cell of adipose tissue. 2011-03-01T09:57:17Z https://cellxgene.cziscience.com/cellguide/CL_0002570 mesenchymal stem cell of adipose mesenchymal stem cell of adipose tissue A mesenchymal stem cell of adipose tissue. GOC:tfm CL:0002573 A glial cell that myelinates or ensheathes axons in the peripheral nervous system. 2011-03-02T01:19:27Z BTO:0001220 CALOHA:TS-0898 MESH:D012583 https://cellxgene.cziscience.com/cellguide/CL_0002573 neurolemmocyte A myelinating Schwann cell wraps around a single axon. Myelination occurs in larger diameter axons, while a process called ensheathment occurs on smaller diameter axons in which a single cell wraps around multiple small, unmyelinated axons separating them with a thin layer of cytoplasm. The structure formed is called a Remak bundle. Schwann cell A glial cell that myelinates or ensheathes axons in the peripheral nervous system. GOC:tfm PMID:16807057 neurolemmocyte PMID:32119275 PMID:38638689 A myelinating Schwann cell wraps around a single axon. Myelination occurs in larger diameter axons, while a process called ensheathment occurs on smaller diameter axons in which a single cell wraps around multiple small, unmyelinated axons separating them with a thin layer of cytoplasm. The structure formed is called a Remak bundle. PMID:16807057 CL:0002585 A blood vessel endothelial cell that is part of the retina. 2011-03-06T03:28:27Z https://cellxgene.cziscience.com/cellguide/CL_0002585 retinal blood vessel endothelial cell A blood vessel endothelial cell that is part of the retina. GOC:tfm CL:0002589 A smooth muscle cell of the bachiocephalic vasculature. 2011-03-06T05:00:58Z smooth muscle cell of the brachiocephalic vasculature A smooth muscle cell of the bachiocephalic vasculature. GOC:tfm CL:0002590 A vascular associated smooth muscle cell of the brain vasculature. 2011-03-06T05:01:20Z smooth muscle cell of the brain vasculature A vascular associated smooth muscle cell of the brain vasculature. GOC:tfm CL:0002591 A smooth muscle of the pulmonary artery. 2011-03-06T05:01:28Z BTO:0003336 https://cellxgene.cziscience.com/cellguide/CL_0002591 smooth muscle cell of the pulmonary artery A smooth muscle of the pulmonary artery. GOC:tfm CL:0002595 A smooth muscle cell of the subclavian artery. 2011-03-06T05:01:52Z smooth muscle cell of the subclavian artery A smooth muscle cell of the subclavian artery. GOC:tfm CL:0002596 Smooth muscle cell of the carotid artery. 2011-03-06T05:01:56Z smooth muscle cell of the carotid artery Smooth muscle cell of the carotid artery. GOC:tfm CL:0002598 Any smooth muscle cell that is part of some bronchus. 2011-03-06T05:46:39Z BTO:0004402 https://cellxgene.cziscience.com/cellguide/CL_0002598 bronchial smooth muscle cell Any smooth muscle cell that is part of some bronchus. FBC:Autogenerated CL:0002599 A smooth muscle cell of the esophagus. 2011-03-06T05:48:17Z smooth muscle cell of the esophagus A smooth muscle cell of the esophagus. GOC:tfm CL:0002600 A smooth muscle cell of the trachea. 2011-03-06T05:50:28Z https://cellxgene.cziscience.com/cellguide/CL_0002600 smooth muscle cell of trachea A smooth muscle cell of the trachea. GOC:tfm CL:0002610 A neuron of the raphe nuclei. 2011-03-06T07:42:06Z raphe nuclei neuron A neuron of the raphe nuclei. GOC:tfm CL:0002612 A neuron of the ventral spinal cord. 2011-03-06T07:46:03Z neuron of the ventral spinal cord A neuron of the ventral spinal cord. GOC:tfm CL:0002620 A fibroblast of skin. 2011-03-14T12:31:49Z BTO:0001255 CALOHA:TS-0935 skin fibroblast A fibroblast of skin. GOC:tfm CL:0002632 Any epithelial cell that is part of some lower respiratory tract epithelium. 2011-06-21T12:29:31Z epithelial cell of lower respiratory tract Any epithelial cell that is part of some lower respiratory tract epithelium. FBC:Autogenerated CL:0002653 A squamous shaped endothelial cell. 2011-07-08T03:31:25Z squamous endothelial cell A squamous shaped endothelial cell. GOC:dos CL:0002657 A glandular epithelial cell of the esophagus. 2011-07-08T03:55:57Z FMA:86548 glandular cell of esophagus A glandular epithelial cell of the esophagus. GOC:tfm CL:0002659 A glandular epithelial cell that is part of the stomach. 2011-07-11T01:20:35Z CALOHA:TS-1284 FMA:86554 glandular cell of stomach glandular epithelial cell of stomach A glandular epithelial cell that is part of the stomach. GOC:tfm CL:0002663 A myocardial endocrine cell that is part of the atrium. 2011-07-11T02:45:39Z FMA:83389 myocardial endocrine cell of atrium A myocardial endocrine cell that is part of the atrium. GOC:tfm CL:0002664 A stem cell that can give rise to multiple cell types (i.e. smooth muscle, endothelial) in the developing heart. 2011-07-11T03:15:38Z cardiovascular progenitor cell Discrepancy in develops from origins prevents me from making the assertion that cardioblasts give rise to all instances of cardiocytes as we state cardiac muscle cells develop from cardiac myoblast, which in turn develop from muscle stem cell. cardioblast A stem cell that can give rise to multiple cell types (i.e. smooth muscle, endothelial) in the developing heart. GOC:tfm PMID:19745164 cardiovascular progenitor cell PMID:17519333 PMID:19745164 CL:0002672 A multi-fate stem cell that can give rise to different retinal cell types including rod and cone cells. 2011-08-16T02:38:01Z retinal progenitor cell A multi-fate stem cell that can give rise to different retinal cell types including rod and cone cells. GOC:tfm PMID:20959166 PMID:21148186 CL:0002673 A skeletal muscle cell that is part of the tongue. 2011-08-16T03:10:02Z https://cellxgene.cziscience.com/cellguide/CL_0002673 tongue muscle cell A skeletal muscle cell that is part of the tongue. GOC:tfm PMID:18816858 CL:0002676 A neuroblast derived from a neural crest cell. 2011-08-22T09:24:15Z neural crest derived neuroblast A neuroblast derived from a neural crest cell. GOC:tfm PMID:17407019 A retinal ganglion cell that has dendrites stratified in two layers of the inner-plexiform layer. https://orcid.org/0000-0001-7258-9596 https://orcid.org/0000-0002-5260-9315 retinal ganglion D cell cell CL:0003001 bistratified retinal ganglion cell CL:0003001 A central nervous system neuron that stratifies at one and only one location. https://orcid.org/0000-0001-7258-9596 https://orcid.org/0000-0002-5260-9315 cell CL:0004246 monostratified cell CL:0004246 A central nervous system neuron that stratifies at one and only one location. PMID:9620701 A neuron that stratifies dendrites at two and only two locations. https://orcid.org/0000-0001-7258-9596 cell CL:0004247 bistratified cell CL:0004247 A neuron that stratifies dendrites at two and only two locations. PMID:9620701 https://orcid.org/0000-0002-5260-9315 CL:0005000 A CNS interneuron located in the spinal cord. Is_a interneuron, part_of UBERON:0002240. spinal cord interneuron A CNS interneuron located in the spinal cord. CL:CVS CL:0005012 A columnar/cuboidal epithelial cell with multiple motile cilia on its apical surface. These cells facilitate the movement of liquids such as mucus or cerebrospinal fluid across the epithelial surface. multi-ciliated cell multiciliated cell https://cellxgene.cziscience.com/cellguide/CL_0005012 multi-ciliated epithelial cell multiciliated epithelial cell While the term 'multi-ciliated epithelial cell' refers to cells with multiple motile cilia, there are exceptions where epithelial cells may have multiple non-motile cilia. Examples include olfactory sensory neurons, which have non-motile cilia for sensory detection, and choroid plexus epithelial cells, which possess multiple non-motile cilia with transient motility during development. Multiciliated cells are essential for human health, and their dysfunction can lead to various diseases known as ciliopathies, such as primary ciliary dyskinesia. This condition affects the respiratory system, brain ventricles, and reproductive system, leading to chronic respiratory infections, hydrocephalus, and infertility multiciliated epithelial cell A columnar/cuboidal epithelial cell with multiple motile cilia on its apical surface. These cells facilitate the movement of liquids such as mucus or cerebrospinal fluid across the epithelial surface. CL:CVS PMID:28400610 PMID:30422572 PMID:38032388 While the term 'multi-ciliated epithelial cell' refers to cells with multiple motile cilia, there are exceptions where epithelial cells may have multiple non-motile cilia. Examples include olfactory sensory neurons, which have non-motile cilia for sensory detection, and choroid plexus epithelial cells, which possess multiple non-motile cilia with transient motility during development. Multiciliated cells are essential for human health, and their dysfunction can lead to various diseases known as ciliopathies, such as primary ciliary dyskinesia. This condition affects the respiratory system, brain ventricles, and reproductive system, leading to chronic respiratory infections, hydrocephalus, and infertility PMID:22118931 PMID:23959957 PMID:25729351 PMID:26378583 CL:0005024 A motor neuron that innervates a skeletal muscle. These motor neurons are all excitatory and cholinergic. somatic motor neuron somatomotor neuron A motor neuron that innervates a skeletal muscle. These motor neurons are all excitatory and cholinergic. ZFIN:CVS CL:0007001 Cell that has the potential to form a skeletal cell type (e.g. cells in periosteum, cells in marrow) and produce extracellular matrix (often mineralized) and skeletal tissue (often mineralized). 2012-06-15T02:51:27Z scleroblast Needs logical definition. Should be capable_of skeletal system morphogenesis? or skeletal tissue development? needs to be added to GO. NOTES:a cell type of the early embryo (see also: mesenchymal cells) that will give rise to mineralized connective tissue. Scleroblasts can differentiate into osteoblasts (bone-forming cells), chondroblasts (cartilage-forming cells), odontoblasts (dentin-forming cells), ameloblasts (enamel-forming cells). The mesenchymal cells developing into osteoblasts and chondroblasts are derived from the mesoderm. Those developing into odontoblasts are neural crest cells. Those developing into ameloblasts are derived from the ectoderm. (http://www.copewithcytokines.de/cope.cgi?key=scleroblasts) skeletogenic cell Cell that has the potential to form a skeletal cell type (e.g. cells in periosteum, cells in marrow) and produce extracellular matrix (often mineralized) and skeletal tissue (often mineralized). GO_REF:0000034 scleroblast GO_REF:0000034 CL:0007004 Cell that is part of the neural crest region of the neuroepithelium, prior to migration. Note that not all premigratory neural crest cells may become migratory neural crest cells. 2012-06-27T08:27:35Z premigratory neural crest cell Cell that is part of the neural crest region of the neuroepithelium, prior to migration. Note that not all premigratory neural crest cells may become migratory neural crest cells. UBERONREF:0000002 CL:0007009 Skeletogenic cell that has the potential to develop into a chondroblast; and arises from neural crest, meseosdermal and notochordal and connective tissue cells. 2012-06-27T10:44:01Z prechondroblast Skeletogenic cell that has the potential to develop into a chondroblast; and arises from neural crest, meseosdermal and notochordal and connective tissue cells. GO_REF:0000034 CL:0008000 Any muscle cell in which the fibers are not organised into sarcomeres. non-striated muscle cell Any muscle cell in which the fibers are not organised into sarcomeres. GOC:DOS CL:0008001 Any hematopoietic cell that is a precursor of some other hematopoietic cell type. hematopoietic precursor cell Any hematopoietic cell that is a precursor of some other hematopoietic cell type. GOC:dos CL:0008002 A transversely striated, synctial cell of skeletal muscle. It is formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. MESH:D018485 skeletal muscle fiber A transversely striated, synctial cell of skeletal muscle. It is formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. GOC:tfm ISBN:0323052908 CL:0008007 A muscle cell that is part of some visceral muscle. visceral muscle cell A muscle cell that is part of some visceral muscle. GOC:dos CL:0008008 A visceral muscle cell that is striated. Examples include the visceral muscle cells of arhtropods. striated visceral muscle cell A visceral muscle cell that is striated. Examples include the visceral muscle cells of arhtropods. GOC:dos CL:0008009 A visceral muscle that is transversely striated. Examples include the visceral muscle cells of arthropods. transversely striated visceral muscle cell A visceral muscle that is transversely striated. Examples include the visceral muscle cells of arthropods. GOC:dos CL:0008017 A skeletal muscle myoblast that is part of a skeletal mucle. These cells are formed following acivation and division of skeletal muscle satellite cells. They form a transient population that is lost when they fuse to form skeletal muscle fibers. myogenic precursor cell The vast majority of these cells develop from skeletal muscle satellite cells, although there are some reports of other origins. adult skeletal muscle myoblast A skeletal muscle myoblast that is part of a skeletal mucle. These cells are formed following acivation and division of skeletal muscle satellite cells. They form a transient population that is lost when they fuse to form skeletal muscle fibers. PMID:23303905 myogenic precursor cell PMID:23303905 CL:0008019 A non-polarised cell precursor cell that is part of some mesenchyme, is associated with the cell matrix but is not connected to other cells and is capable of migration. mesenchyme cell mesenchymal cell CL:0008022 A mesenchymal cell of the endocardial cushion. These cells develop via an epithelial to mesenchymal transition when endocardial cells break cell-to-cell contacts and migrate into the cardiac jelly. Cells from this population form the heart septa and valves. endocardial cushion cell A mesenchymal cell of the endocardial cushion. These cells develop via an epithelial to mesenchymal transition when endocardial cells break cell-to-cell contacts and migrate into the cardiac jelly. Cells from this population form the heart septa and valves. PMID:18816864 CL:0008025 A neuron that release noradrenaline (noriphinephrine) as a neurotransmitter. noradrenergic neuron A neuron that release noradrenaline (noriphinephrine) as a neurotransmitter. GOC:dos CL:0008028 Any neuron that is capable of part of some visual perception. 2017-07-09T19:12:36Z visual system neuron Any neuron that is capable of part of some visual perception. FBC:Autogenerated CL:0008031 An interneuron that has its soma located in the cerebral cortex. cerebral cortex interneuron cortical interneuron CL:0008034 Mural cells are pericytes and the vascular smooth muscle cells (vSMCs) of the microcirculation. 2020-02-29T17:33:55Z mural cell Mural cells are pericytes and the vascular smooth muscle cells (vSMCs) of the microcirculation. Wiki:Mural_cell&oldid=930603194 CL:0008035 Any vascular associated smooth muscle cell that is part of some microcirculatory vessel. 2020-02-29T17:37:00Z microcirculation associated smooth muscle cell Any vascular associated smooth muscle cell that is part of some microcirculatory vessel. FBC:Autogenerated CL:0008055 A secretory epithelial cell of the respiratory tract epithelium. These cells have an endodermal origin. https://orcid.org/0000-0002-7073-9172 2025-02-19T16:01:02Z respiratory tract secretory epithelial cell A secretory epithelial cell of the respiratory tract epithelium. These cells have an endodermal origin. DOI:10.1038/s41591-023-02327-2. CL:0009000 A sensory neuron of the spinal nerve that senses body position and sends information about how much the muscle is stretched to the spinal cord. spinal sensory neuron sensory neuron of spinal nerve A sensory neuron of the spinal nerve that senses body position and sends information about how much the muscle is stretched to the spinal cord. GOC:nv GOC:pr CL:0009001 Any cell in the compound eye, a light sensing organ composed of ommatidia. GOC:pr PMID:12021768 compound eye retinal cell CL:0009004 Any cell in the retina, the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. PMID:10702418 retinal cell Any cell in the retina, the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. GOC:pr CL:0009097 A skeletal muscle fiber found in an embryo. In mammalian embryos, skeletal muscle expresses myosin heavy chain-embryonic (MyHC-emb, encoded by the MYH3 gene), which regulates skeletal muscle development. 2022-02-21T15:39:10Z embryonic skeletal muscle fiber A skeletal muscle fiber found in an embryo. In mammalian embryos, skeletal muscle expresses myosin heavy chain-embryonic (MyHC-emb, encoded by the MYH3 gene), which regulates skeletal muscle development. PMID:32094117 PMID:7196501 http://orcid.org/0000-0003-2034-601X CL:0010001 A stromal cell that is part_of a bone marrow. bone marrow stromal cell stromal cell of bone marrow CL:0010004 A mononuclear cell that is part_of a bone marrow. bone marrow mononuclear cell mononuclear cell of bone marrow CL:0010006 Any blood vessel endothelial cell that is part of some heart. cardiac blood vessel endothelial cell Any blood vessel endothelial cell that is part of some heart. FBC:Autogenerated CL:0010007 Any cell that is part of some His-Purkinje system. His-Purkinje system cell Any cell that is part of some His-Purkinje system. FBC:Autogenerated CL:0010008 Any endothelial cell that is part of some heart. https://cellxgene.cziscience.com/cellguide/CL_0010008 cardiac endothelial cell Any endothelial cell that is part of some heart. FBC:Autogenerated CL:0010009 Any photoreceptor cell that is part of some camera-type eye. camera type eye photoreceptor cell camera-type eye photoreceptor cell Any photoreceptor cell that is part of some camera-type eye. FBC:Autogenerated CL:0010012 A CNS neuron of the cerebral cortex. BTO:0004102 FMA:84104 cortical neuron neuron of cerebral cortex cerebral cortex neuron A CNS neuron of the cerebral cortex. GOC:tfm CL:0010017 A zygote in a plant or an animal. MESH:D015053 zygote CL:0010020 Any glial cell that is part of some heart. cardiac glial cell Any glial cell that is part of some heart. FBC:Autogenerated CL:0010021 Any myoblast that develops into some cardiac muscle cell. MESH:D032386 cardiac myoblast Any myoblast that develops into some cardiac muscle cell. FBC:Autogenerated CL:0010022 A neuron that has its soma in the heart. This term is used in 3 GO terms that were created as part of the heart development focus project. cardiac neuron A neuron that has its soma in the heart. PMID:12486170 PMID:29265764 CL:0011001 A motor neuron that passes from the spinal cord toward or to a muscle and conducts an impulse that causes movement. spinal cord motor neuron A motor neuron that passes from the spinal cord toward or to a muscle and conducts an impulse that causes movement. GOC:nv CL:0011007 A cell in the area of mesoderm in the neurulating embryo that flanks and forms simultaneously with the neural tube. The cells of this region give rise to somites. paraxial mesoderm cell somitic mesoderm cell presomitic mesoderm cell paraxial cell A cell in the area of mesoderm in the neurulating embryo that flanks and forms simultaneously with the neural tube. The cells of this region give rise to somites. GOC:NV PMID:11687492 CL:0011012 A cell of the neural crest. Neural crest cells are multipotent. Premigratory neural crest cells are found at the neural plate boarder, some of which will undergo ectomesynchymal transition and delamination to form migratory neural crest cells. https://cellxgene.cziscience.com/cellguide/CL_0011012 neural crest cell A cell of the neural crest. Neural crest cells are multipotent. Premigratory neural crest cells are found at the neural plate boarder, some of which will undergo ectomesynchymal transition and delamination to form migratory neural crest cells. https://orcid.org/0000-0001-5208-3432 https://orcid.org/0000-0002-9900-7880 CL:0011019 A mesothelial cell that is part of the epicardium. mesothelial cell of epicardium CL:0011021 A fibroblast that is part of upper back skin. fibroblast of upper back skin CL:0011022 A fibroblast that is part of skin of back. fibroblast of skin of back CL:0011026 A precursor cell that has a tendency to differentiate into a specific type of cell. They are descendants of stem cells, only they are more constrained in their differentiation potential or capacity for self-renewal, and are often more limited in both senses. progenitor cell A precursor cell that has a tendency to differentiate into a specific type of cell. They are descendants of stem cells, only they are more constrained in their differentiation potential or capacity for self-renewal, and are often more limited in both senses. ISBN:978-1-62808-994-3 https://doi.org/10.1016/B978-0-12-409503-8.00002-0 CL:0011027 Any fibroblast that is part of skeletal muscle tissue. https://cellxgene.cziscience.com/cellguide/CL_0011027 skeleton muscle fibroblast skeletal muscle fibroblast Any fibroblast that is part of skeletal muscle tissue. PMID:28369879 https://orcid.org/0000-0001-6164-0667 CL:0011030 Any microvascular endothelial cell that is part of the dermis. DMEC cell dermal microvascular endothelium cell dermal microvascular endothelial cell Any microvascular endothelial cell that is part of the dermis. BTO:0004574 CL:patterns/cellPartOfAnatomicalEntity CL:0011115 A cell that, by division or terminal differentiation, can give rise to other cell types. Work is needed on GO 'cell differentiation' before it is clear whether the equivalent class definition 'native cell' that capable_of some 'cell differentiation' works. Also, may want to consider merging this with non-terminally differentiated cell. precursor cell A cell that, by division or terminal differentiation, can give rise to other cell types. GOC:dos CL:0012001 A CNS neuron of the forebrain. forebrain neuron neuron of the forebrain CL:0017500 Cytoplasm that exhibits a characteristic staining and color, pale-pink, with Wright-Giemsa stain. 2010-05-25T01:36:34Z neutrophillic cytoplasm Cytoplasm that exhibits a characteristic staining and color, pale-pink, with Wright-Giemsa stain. GOC:add CL:0017502 Cytoplasm that exhibits a characteristic staining and color, red or pink, with Eosin stain. 2009-12-22T04:23:25Z eosinophilic acidophilic cytoplasm Cytoplasm that exhibits a characteristic staining and color, red or pink, with Eosin stain. GOC:add CL:0017503 Cytoplasm that exhibits molecular interaction for basic dyes under specific pH conditions. 2009-12-22T04:24:54Z basophilic cytoplasm Cytoplasm that exhibits molecular interaction for basic dyes under specific pH conditions. GOC:tfm CL:0017504 Cytoplasm that exhibits affinity for both basic and acid stains under specific pH conditions. 2009-12-28T04:25:23Z polychromatophilic cytoplasm Cytoplasm that exhibits affinity for both basic and acid stains under specific pH conditions. GOC:tfm CL:0017507 A concave nucleus shape where the indentation is smaller than half of the distance to the farthest nuclear margin. 2009-12-23T02:31:25Z reniform nucleus A concave nucleus shape where the indentation is smaller than half of the distance to the farthest nuclear margin. GOC:tfm CL:0017509 Any nucleus that has characteristic some alobate. alobate nucleus Any nucleus that has characteristic some alobate. FBC:Autogenerated CL:0019001 Any serous secreting cell that is part of the tracheobronchial epithelium. 2020-05-07T16:03:27Z https://cellxgene.cziscience.com/cellguide/CL_0019001 serous cell of tracheobronchial tree tracheobronchial serous cell CL:0019002 Any chondrocyte that is part of the tracheobronchial tree. 2020-05-07T17:29:51Z chondrocyte of tracheobronchial tree tracheobronchial chondrocyte CL:0019018 A smooth muscle cell that is part of any blood vessel. 2020-07-21T12:42:48Z smooth muscle cell of blood vessel blood vessel smooth muscle cell A smooth muscle cell that is part of any blood vessel. PMID:9108778 CL:0019019 A smooth muscle cell that is part of the tracheobronchial tree. 2020-07-21T12:50:22Z https://cellxgene.cziscience.com/cellguide/CL_0019019 smooth muscle cell of tracheobronchial tree The marker set ACTA2, TAGLN can identify the Human cell type tracheobronchial smooth muscle cell in the Lung with a confidence of 0.69 (NS-Forest FBeta value). tracheobronchial smooth muscle cell A smooth muscle cell that is part of the tracheobronchial tree. PMID:10853867 The marker set ACTA2, TAGLN can identify the Human cell type tracheobronchial smooth muscle cell in the Lung with a confidence of 0.69 (NS-Forest FBeta value). https://doi.org/10.5281/zenodo.11165918 CL:1000042 Any neuroblast (sensu Vertebrata) that is part of some forebrain. forebrain neuroblast Any neuroblast (sensu Vertebrata) that is part of some forebrain. FBC:Autogenerated CL:1000222 A specialised neuroendocrine cell located in the gastric mucosa that regulates digestive processes including acid secretion and gut motility. This cell stores hormones in large dense core vesicles and synaptic-like microvesicles. DES cell diffuse endocrine system cell stomach neuroendocrine cell A specialised neuroendocrine cell located in the gastric mucosa that regulates digestive processes including acid secretion and gut motility. This cell stores hormones in large dense core vesicles and synaptic-like microvesicles. PMID:15153415 DES cell PMID:15153415 diffuse endocrine system cell PMID:15153415 CL:1000223 A neuroendocrine cell that is part of respiratory epithelium of the lung and is involved in the sensory detection of environmental stimuli, including hypoxia, nicotine and air pressure. Ultrastructurally, this cell type is characterized by the presence of cytoplasmic dense core granules, which are considered the storage sites of amine and peptide hormones. Pulmonary neuroendocrine cells are innervated and appear as solitary cells or as clustered masses, localized at airway bifurcation sites, called neuroepithelial bodies that can release serotonin in response to hypoxia and interact with sensory nerve terminals. Pulmonary neuroendocrine cells also function as reserve stem cells that repair the surrounding epithelium after injury. https://cellxgene.cziscience.com/cellguide/CL_1000223 lung neuroendocrine cell The marker set CHGA, GRP can identify the Human cell type lung neuroendocrine cell in the Lung with a confidence of 0.94 (NS-Forest FBeta value). pulmonary neuroendocrine cell A neuroendocrine cell that is part of respiratory epithelium of the lung and is involved in the sensory detection of environmental stimuli, including hypoxia, nicotine and air pressure. Ultrastructurally, this cell type is characterized by the presence of cytoplasmic dense core granules, which are considered the storage sites of amine and peptide hormones. Pulmonary neuroendocrine cells are innervated and appear as solitary cells or as clustered masses, localized at airway bifurcation sites, called neuroepithelial bodies that can release serotonin in response to hypoxia and interact with sensory nerve terminals. Pulmonary neuroendocrine cells also function as reserve stem cells that repair the surrounding epithelium after injury. PMID:33355253 doi:10.3109/01902148209069653 doi:10.7554/eLife.78216 lung neuroendocrine cell PMID:15018448 The marker set CHGA, GRP can identify the Human cell type lung neuroendocrine cell in the Lung with a confidence of 0.94 (NS-Forest FBeta value). https://doi.org/10.5281/zenodo.11165918 CL:1000271 An epithelial cell that is part of the lung epithelium. This cell is characterised by the presence of cilia on its apical surface. lung ciliated cell lung multiciliated epithelial cell An epithelial cell that is part of the lung epithelium. This cell is characterised by the presence of cilia on its apical surface. PMID:27864314 CL:1000272 Any secretory cell that is part of some lung. lung secretory cell Any secretory cell that is part of some lung. FBC:Autogenerated CL:1000274 An extraembryonic cell that is part of the trophectoderm, representing the first lineage to differentiate in the embryo. This cell is crucial for implantation into the uterine wall and differentiates into trophoblast cells, which contribute to placenta formation and facilitate maternal-fetal nutrient and signal exchange. trophectoderm cell trophectodermal cell An extraembryonic cell that is part of the trophectoderm, representing the first lineage to differentiate in the embryo. This cell is crucial for implantation into the uterine wall and differentiates into trophoblast cells, which contribute to placenta formation and facilitate maternal-fetal nutrient and signal exchange. PMID:22918806 CL:1000298 A mesothelial cell that is part of the dura mater. FMA:256516 squamous mesothelial cell of dura mater mesothelial cell of dura mater A mesothelial cell that is part of the dura mater. GOC:tfm squamous mesothelial cell of dura mater FMA:256516 CL:1000303 A fibroblast that is part of the areolar connective tissue. FMA:261279 fibroblast of areolar connective tissue A fibroblast that is part of the areolar connective tissue. GOC:tfm CL:1000306 A fibroblast that is part of the tunica adventitia of artery. FMA:261285 fibroblast of tunica adventitia of artery A fibroblast that is part of the tunica adventitia of artery. GOC:tfm CL:1000307 A fibroblast that is part of the dense regular elastic tissue. FMA:261287 fibroblast of dense regular elastic tissue A fibroblast that is part of the dense regular elastic tissue. GOC:tfm CL:1000309 An adipocyte that is part of the epicardial fat. FMA:261293 adipocyte of epicardial fat epicardial fat cell epicardial adipocyte An adipocyte that is part of the epicardial fat. GOC:tfm adipocyte of epicardial fat FMA:261293 epicardial fat cell FMA:261293 CL:1000310 An adipocyte that is part of the epicardial fat of right ventricle. FMA:261297 epicardial adipocyte of right ventricle epicardial fat cell of right ventricle adipocyte of epicardial fat of right ventricle An adipocyte that is part of the epicardial fat of right ventricle. GOC:tfm epicardial adipocyte of right ventricle FMA:261297 epicardial fat cell of right ventricle FMA:261297 CL:1000311 An adipocyte that is part of the epicardial fat of left ventricle. FMA:261300 epicardial adipocyte of left ventricle epicardial fat cell of left ventricle adipocyte of epicardial fat of left ventricle An adipocyte that is part of the epicardial fat of left ventricle. GOC:tfm epicardial adipocyte of left ventricle FMA:261300 epicardial fat cell of left ventricle FMA:261300 CL:1000330 A serous secreting cell that is part of the epithelium of trachea. FMA:263078 https://cellxgene.cziscience.com/cellguide/CL_1000330 serous cell of epithelium of trachea A serous secreting cell that is part of the epithelium of trachea. GOC:tfm CL:1000331 A serous secreting cell that is part of the epithelium of bronchus. FMA:263080 https://cellxgene.cziscience.com/cellguide/CL_1000331 serous cell of epithelium of bronchus A serous secreting cell that is part of the epithelium of bronchus. GOC:tfm CL:1000361 A transitional myocyte that is part of the interatrial septum. FMA:263152 transitional myocyte of interatrial septum A transitional myocyte that is part of the interatrial septum. GOC:tfm CL:1000362 A transitional myocyte that is part of the interventricular septum. FMA:263154 transitional myocyte of interventricular septum A transitional myocyte that is part of the interventricular septum. GOC:tfm CL:1000376 A Purkinje myocyte that is part of the interventricular septum. FMA:263182 Purkinje myocyte of interventricular septum A Purkinje myocyte that is part of the interventricular septum. GOC:tfm CL:1000409 A muscle cell that is part of the sinoatrial node. FMA:67102 SA nodal myocyte SA node cardiac muscle cell sinoatrial node cell sinoatrial node myocyte sinuatrial node myocyte myocyte of sinoatrial node A muscle cell that is part of the sinoatrial node. FMA:67102 GOC:tfm SA nodal myocyte FMA:67102 SA node cardiac muscle cell GOC:pr sinoatrial node cell GOC:pr sinuatrial node myocyte FMA:67102 CL:1000410 A muscle cell that is part of the atrioventricular node. FMA:67106 AV nodal myocyte AV node cardiac muscle cell AV node cell atrioventricular node cell atrioventricular node myocyte myocyte of atrioventricular node A muscle cell that is part of the atrioventricular node. FMA:67106 GOC:tfm AV nodal myocyte FMA:67106 AV node cardiac muscle cell GOC:pr AV node cell GOC:pr atrioventricular node cell GOC:pr atrioventricular node myocyte FMA:67106 CL:1000412 An endothelial cell that is part of the arteriole. FMA:67760 KUPO:0001097 endothelial cell of arteriole An endothelial cell that is part of the arteriole. GOC:tfm CL:1000413 A blood vessel endothelial cell that is part of an arterial endothelium. BTO:0004758 FMA:67761 KUPO:0001095 https://cellxgene.cziscience.com/cellguide/CL_1000413 arterial endothelial cell endothelial cell of artery A blood vessel endothelial cell that is part of an arterial endothelium. GOC:tfm CL:1000414 An endothelial cell that is part of the venule. FMA:67762 endothelial cell of venule An endothelial cell that is part of the venule. GOC:tfm CL:1000428 A somatic stem cell that is part of the epidermis. FMA:70541 epidermal stem cell stem cell of epidermis A somatic stem cell that is part of the epidermis. GOC:tfm epidermal stem cell FMA:70541 CL:1000443 A smooth muscle cell that is part of the ciliary body. FMA:70610 https://cellxgene.cziscience.com/cellguide/CL_1000443 smooth muscle cell of ciliary body ciliary muscle cell A smooth muscle cell that is part of the ciliary body. GOC:tfm smooth muscle cell of ciliary body FMA:70610 CL:1000444 A mesothelial cell that is part of the anterior chamber of eyeball. FMA:70615 mesothelial cell of anterior chamber of eye A mesothelial cell that is part of the anterior chamber of eyeball. GOC:tfm CL:1000456 A mesothelial cell that is part of the parietal peritoneum. FMA:72142 mesothelial cell of parietal peritoneum A mesothelial cell that is part of the parietal peritoneum. GOC:tfm CL:1000457 A mesothelial cell that is part of the visceral peritoneum. FMA:72143 mesothelial cell of visceral peritoneum A mesothelial cell that is part of the visceral peritoneum. GOC:tfm CL:1000478 A transitional myocyte that is part of the sinoatrial node. FMA:83384 transitinal myocyte of sinuatrial node transitional myocyte of sinoatrial node A transitional myocyte that is part of the sinoatrial node. GOC:tfm CL:1000479 A Purkinje myocyte that is part of the atrioventricular node. FMA:83386 Purkinje myocyte of atrioventricular node A Purkinje myocyte that is part of the atrioventricular node. GOC:tfm CL:1000482 A myocardial endocrine cell that is part of the interventricular septum. FMA:83390 myocardial endocrine cell of interventricular septum A myocardial endocrine cell that is part of the interventricular septum. GOC:tfm CL:1000490 A mesothelial cell that is part of the peritoneum. FMA:86736 peritoneal mesothelial cell mesothelial cell of peritoneum A mesothelial cell that is part of the peritoneum. GOC:tfm peritoneal mesothelial cell FMA:86736 CL:1000491 A mesothelial cell that is part of the pleura. FMA:86737 https://cellxgene.cziscience.com/cellguide/CL_1000491 pleural mesothelial cell mesothelial cell of pleura A mesothelial cell that is part of the pleura. GOC:tfm pleural mesothelial cell FMA:86737 CL:1000492 A mesothelial cell that is part of the parietal pleura. FMA:86738 mesothelial cell of parietal pleura A mesothelial cell that is part of the parietal pleura. GOC:tfm CL:1000493 A mesothelial cell that is part of the visceral pleura. FMA:86739 https://cellxgene.cziscience.com/cellguide/CL_1000493 mesothelial cell of visceral pleura A mesothelial cell that is part of the visceral pleura. GOC:tfm CL:1001517 The various hormone- or neurotransmitter-secreting cells present throughout the mucosa of the stomach. stomach enteroendocrine cell The various hormone- or neurotransmitter-secreting cells present throughout the mucosa of the stomach. MP:0010803 CL:1001567 Any endothelial cell of vascular tree that is part of some lung. endothelial cell of lung pulmonary vessel endothelial cell lung endothelial cell Any endothelial cell of vascular tree that is part of some lung. FBC:Autogenerated CL:1001568 Any endothelial cell of vascular tree that is part of some pulmonary artery. BTO:0001141 PAEC cell pulmonary artery endothelial cell Any endothelial cell of vascular tree that is part of some pulmonary artery. FBC:Autogenerated PAEC cell BTO:0001141 CL:1001576 Squamous cell of oral epithelium. CALOHA:TS-1252 oral cavity mucosa squamous cell oral cavity mucosa squamous epithelial cell oral mucosa squamous epithelial cell oral mucosa squamous epithelial cells oral mucosa squamous cell Squamous cell of oral epithelium. NPX:PDR oral cavity mucosa squamous cell CALOHA:TS-1252 oral cavity mucosa squamous epithelial cell CALOHA:TS-1252 oral mucosa squamous epithelial cell CALOHA:TS-1252 oral mucosa squamous epithelial cells CALOHA:TS-1252 CL:1001579 Glial cell of cerebral cortex. CALOHA:TS-1256 brain cortex glial cell cerebral cortex glial cells cerebrum cortex glial cell cerebral cortex glial cell Glial cell of cerebral cortex. NPX:PDR brain cortex glial cell CALOHA:TS-1256 cerebral cortex glial cells CALOHA:TS-1256 cerebrum cortex glial cell CALOHA:TS-1256 CL:1001602 A distinct endothelial cell forming the walls of the capillaries within the cerebral cortex. CALOHA:TS-2372 https://cellxgene.cziscience.com/cellguide/CL_1001602 cerebral cortex endothelial cells endothelial cells of cerebral cortex cerebral cortex endothelial cell A distinct endothelial cell forming the walls of the capillaries within the cerebral cortex. NPX:PDR cerebral cortex endothelial cells CALOHA:TS-2372 endothelial cells of cerebral cortex CALOHA:TS-2372 CL:1001609 Fibroblast from muscle organ. CALOHA:TS-0643 muscle fibroblast Fibroblast from muscle organ. NPX:PDR CL:1001610 Hematopoietic cells resident in the bone marrow. Include: hematopoietic stem cells (lymphoid stem cells and myeloid stem cells) and the precursor cells for thrombocytes, erythrocytes, basophils, neutrophils, eosinophils, monocytes and lymphocytes. CALOHA:TS-2109 bone marrow hematopoietic cells bone marrow poietic cells bone marrow hematopoietic cell Hematopoietic cells resident in the bone marrow. Include: hematopoietic stem cells (lymphoid stem cells and myeloid stem cells) and the precursor cells for thrombocytes, erythrocytes, basophils, neutrophils, eosinophils, monocytes and lymphocytes. NPX:PDR bone marrow hematopoietic cells CALOHA:TS-2109 bone marrow poietic cells CALOHA:TS-2109 CL:1100001 An epithelial cell that is specialised for the synthesis and secretion of specific biomolecules. 2024-07-21T09:24:44Z secretory epithelial cell An epithelial cell that is specialised for the synthesis and secretion of specific biomolecules. A leukocyte with a single non-segmented nucleus in the mature form found in the circulatory pool of blood. 2014-02-11T17:29:04Z CL:2000001 peripheral blood mononuclear cell CL:2000001 A leukocyte with a single non-segmented nucleus in the mature form found in the circulatory pool of blood. GOC:TermGenie Any macroglial cell that is part of a brain. 2014-03-28T21:35:27Z CL:2000005 brain macroglial cell CL:2000005 Any macroglial cell that is part of a brain. GOC:TermGenie Any blood vessel endothelial cell that is part of a microvascular endothelium. 2014-06-04T15:07:42Z CL:2000008 microvascular endothelial cell CL:2000008 Any blood vessel endothelial cell that is part of a microvascular endothelium. GOC:TermGenie Any blood vessel endothelial cell that is part of a dermis. 2014-06-04T15:12:06Z CL:2000010 dermis blood vessel endothelial cell CL:2000010 Any blood vessel endothelial cell that is part of a dermis. GOC:TermGenie Any skin fibroblast that is part of a skin of abdomen. 2014-06-04T15:18:16Z CL:2000013 fibroblast of skin of abdomen CL:2000013 Any skin fibroblast that is part of a skin of abdomen. GOC:TermGenie Any lung endothelial cell that is part of a microvascular endothelium. 2014-06-04T16:00:56Z CL:2000016 lung microvascular endothelial cell CL:2000016 Any lung endothelial cell that is part of a microvascular endothelium. GOC:TermGenie Any photoreceptor cell that is part of a compound eye. 2014-06-24T23:16:45Z CL:2000019 compound eye photoreceptor cell CL:2000019 Any photoreceptor cell that is part of a compound eye. GOC:TermGenie Any native cell that is part of a inner cell mass. 2014-06-24T23:16:53Z CL:2000020 inner cell mass cell CL:2000020 Any native cell that is part of a inner cell mass. GOC:TermGenie Any native cell that is part of a cardiac septum. 2014-06-24T23:17:07Z CL:2000022 cardiac septum cell CL:2000022 Any native cell that is part of a cardiac septum. GOC:TermGenie Any oligodendrocyte that is part of a spinal cord. 2014-06-25T00:23:50Z CL:2000025 spinal cord oligodendrocyte CL:2000025 Any oligodendrocyte that is part of a spinal cord. GOC:TermGenie Any neuron that is part of a central nervous system. 2014-06-25T01:17:43Z CL:2000029 central nervous system neuron CL:2000029 Any neuron that is part of a central nervous system. GOC:TermGenie A neuron that is part of a peripheral nervous system. 2014-06-25T02:28:17Z FMA:84664 PNS neuron peripheral neuron CL:2000032 peripheral nervous system neuron CL:2000032 A neuron that is part of a peripheral nervous system. GOC:TermGenie ISBN:0721662544 Any fibroblast that is part of a embryo. 2014-07-09T00:12:00Z CL:2000042 embryonic fibroblast CL:2000042 Any fibroblast that is part of a embryo. GOC:TermGenie Any microvascular endothelial cell that is part of a brain. 2014-07-09T00:24:53Z CL:2000044 brain microvascular endothelial cell CL:2000044 Any microvascular endothelial cell that is part of a brain. GOC:TermGenie Any cardiac muscle cell that is part of a cardiac ventricle. 2014-08-12T20:50:28Z https://cellxgene.cziscience.com/cellguide/CL_2000046 CL:2000046 ventricular cardiac muscle cell CL:2000046 Any cardiac muscle cell that is part of a cardiac ventricle. GOC:TermGenie Any motor neuron that is part of a brainstem. 2014-10-02T23:52:53Z CL:2000047 brainstem motor neuron CL:2000047 Any motor neuron that is part of a brainstem. GOC:TermGenie Any fibroblast that is part of a female gonad. 2014-10-07T17:57:42Z CL:2000063 http://www.sciencellonline.com/site/productInformation.php?keyword=7330 ovarian fibroblast CL:2000063 Any fibroblast that is part of a female gonad. GOC:TermGenie Any fibroblast that is part of a cardiac ventricle. 2014-10-07T18:35:38Z CL:2000066 http://www.sciencellonline.com/site/productInformation.php?keyword=6310 cardiac ventricle fibroblast CL:2000066 Any fibroblast that is part of a cardiac ventricle. GOC:TermGenie Any fibroblast that is part of a cardiac atrium. 2014-10-07T18:36:54Z CL:2000067 http://www.sciencellonline.com/site/productInformation.php?keyword=6320 cardiac atrium fibroblast CL:2000067 Any fibroblast that is part of a cardiac atrium. GOC:TermGenie Any fibroblast that is part of a pericardium. 2014-10-07T18:38:06Z CL:2000068 http://www.sciencellonline.com/site/productInformation.php?keyword=6430 pericardium fibroblast CL:2000068 Any fibroblast that is part of a pericardium. GOC:TermGenie Any fibroblast that is part of a optic choroid. 2014-10-07T18:50:43Z CL:2000070 http://www.sciencellonline.com/site/productInformation.php?keyword=6620 optic choroid fibroblast CL:2000070 Any fibroblast that is part of a optic choroid. GOC:TermGenie Any microvascular endothelial cell that is part of a adipose tissue. 2014-10-07T22:13:45Z CL:2000072 http://www.sciencellonline.com/site/productInformation.php?keyword=7200 adipose microvascular endothelial cell CL:2000072 Any microvascular endothelial cell that is part of a adipose tissue. GOC:TermGenie Any migratory neural crest cell that is part of a cardiac neural crest. 2014-11-05T01:18:43Z cardiac neural crest cell CL:2000073 migratory cardiac neural crest cell CL:2000073 Any migratory neural crest cell that is part of a cardiac neural crest. GOC:TermGenie cardiac neural crest cell PMID:33060096 Any mesenchymal stem cell of adipose tissue that is part of an abdomen. 2014-12-02T19:10:34Z mesenchymal stem cell of abdominal adipose CL:2000080 mesenchymal stem cell of abdominal adipose tissue CL:2000080 Any mesenchymal stem cell of adipose tissue that is part of an abdomen. GOC:TermGenie Any fibroblast of lung that is part of a bronchus. 2015-03-31T21:16:22Z CL:2000093 bronchus fibroblast of lung CL:2000093 Any fibroblast of lung that is part of a bronchus. GOC:TermGenie A neuron type that is located in a peripheral nervous system and it transmits sensory information from the peripheral (PNS) to the central nervous system (CNS). A sensory neuron converts physical (light, sound, touch) or chemical (such as taste and smell) stimuli into an electrical signal through a process known as sensory transduction. The function of a sensory neuron is to carry informations from the external environment and internal body conditions to the central nervous system for further processing. 2019-02-25T19:34:33Z CL:3000004 Typically, a sensory neuron has a pseudounipolar morphology. peripheral sensory neuron CL:3000004 A neuron type that is located in a peripheral nervous system and it transmits sensory information from the peripheral (PNS) to the central nervous system (CNS). A sensory neuron converts physical (light, sound, touch) or chemical (such as taste and smell) stimuli into an electrical signal through a process known as sensory transduction. The function of a sensory neuron is to carry informations from the external environment and internal body conditions to the central nervous system for further processing. GOC:CellBLAST PMID:30096314 PMID:31554486 PMID:35858549 Wikipedia:Sensory_neuron https://www.britannica.com/science/sensory-neuron https://www.ncbi.nlm.nih.gov/books/NBK539846/ Typically, a sensory neuron has a pseudounipolar morphology. Wikipedia:Sensory_neuron CL:4023066 A pyramidal neuron which has an apical tree which is oriented parallel to the pia. This is unlike typical pyramidal neurons which have its apical dendrite aligned vertically. horizontal pyramidal neuron A pyramidal neuron which has an apical tree which is oriented parallel to the pia. This is unlike typical pyramidal neurons which have its apical dendrite aligned vertically. PMID:30715238 CL:4023072 A cell that is part of the brain vasculature. brain vascular cell A cell that is part of the brain vasculature. DOI:10.1101/2022.10.12.511898 CL:4023077 A type of interneuron that has two clusters of dendritic branches that originate directly from the soma and extend in opposite directions and axons that form a plexus which spreads widely. Compared to bipolar neurons, bitufted neurons have branching that occur close to the soma. bitufted neuron A type of interneuron that has two clusters of dendritic branches that originate directly from the soma and extend in opposite directions and axons that form a plexus which spreads widely. Compared to bipolar neurons, bitufted neurons have branching that occur close to the soma. PMID:18568015 CL:4023079 A GABAergic inhibitory neuron that is derived from the midbrain. midbrain-derived inhibitory neuron A GABAergic inhibitory neuron that is derived from the midbrain. DOI:10.1101/2022.10.12.511898 CL:4023092 A pyramidal neuron which has an apical tree which is oriented towards the white matter. inverted pyramidal neuron A pyramidal neuron which has an apical tree which is oriented towards the white matter. PMID:30715238 CL:4023093 A pyramidal neuron which lacks a tuft formation but extends small radial distances forming a star-like shape. stellate pyramidal neuron A pyramidal neuron which lacks a tuft formation but extends small radial distances forming a star-like shape. PMID:30715238 CL:4023094 A pyramidal neuron which has a distinctive tuft formation, distal from the soma. tufted pyramidal neuron A pyramidal neuron which has a distinctive tuft formation, distal from the soma. PMID:30715238 CL:4023095 A pyramidal neuron which lacks a clear tuft formation but extends to large radial distances. untufted pyramidal neuron A pyramidal neuron which lacks a clear tuft formation but extends to large radial distances. PMID:30715238 CL:4023111 A pyramidal neuron with soma located in the cerebral cortex. cerebral cortex pyramidal neuron A pyramidal neuron with soma located in the cerebral cortex. PMID:30715238 CL:4023154 A glial cell that myelinates axonal processes. myelinating glial cell A glial cell that myelinates axonal processes. DOI:10.1007/3-540-29623-9_3240 CL:4023159 An interneuron that has double bouquet morphology. double bouquet cell An interneuron that has double bouquet morphology. PMID:15378039 CL:4023168 A neuron that is part of the somatic sensory system. Somatosensory neurons innervate the skin or integument to detect different types of thermal, chemical, and mechanical touch stimuli. somatosensory neuron A neuron that is part of the somatic sensory system. Somatosensory neurons innervate the skin or integument to detect different types of thermal, chemical, and mechanical touch stimuli. PMID:22865660 CL:4028001 Any capillary endothelial cell that is part of a lung. 2021-11-23T02:31:40Z lung capillary endothelial cell pulmonary capillary endothelial cell CL:4030029 A lymphocyte located in blood. 2022-11-04T14:40:00Z blood lymphocyte A lymphocyte located in blood. CL:4030034 A multiciliated epithelial cell located in the respiratory tract epithelium, characterized by a columnar shape and motile cilia on its apical surface. This cell develops through a highly orchestrated process, transitioning from a basal progenitor via an intermediate deuterosomal cell stage that generates centrioles essential for ciliogenesis. 2023-01-25T11:06:01Z ciliated cell of the respiratory tract respiratory ciliated cell respiratory multiciliated cell respiratory tract multiciliated cell A multiciliated epithelial cell located in the respiratory tract epithelium, characterized by a columnar shape and motile cilia on its apical surface. This cell develops through a highly orchestrated process, transitioning from a basal progenitor via an intermediate deuterosomal cell stage that generates centrioles essential for ciliogenesis. PMID:18757316 PMID:21364219 PMID:34044844 PMID:37834236 CL:4033008 A(n) vein endothelial cell that is part of a(n) respiratory system. vein endothelial cell of respiratory system A(n) vein endothelial cell that is part of a(n) respiratory system. PMID:34030460 CL:4033018 A megakaryocyte that is resident in the lung connective tissue. 2023-03-16T11:31:23Z lung resident megakaryocyte lung-resident megakaryocyte lung megakaryocyte A megakaryocyte that is resident in the lung connective tissue. PMID:33351116 lung resident megakaryocyte PMID:36524131 lung-resident megakaryocyte PMID:36524131 CL:4033044 An epithelial cell part of respiratory tract epithelium that is a precursor of a multi-ciliated cell. This cell actively amplifies centrioles, a required step for multiciliogenesis. 2023-06-20T10:27:17Z In humans, deuterosomal cells have been noted to have enriched expression of the following: PLK4, FOXJ1, DEUP1, FOXN4, YPEL1, HES6 and CDC20B. Deuterosomal cells were termed after deuterosomes, the platforms of active centriole amplification. deuterosomal cell An epithelial cell part of respiratory tract epithelium that is a precursor of a multi-ciliated cell. This cell actively amplifies centrioles, a required step for multiciliogenesis. PMID:31558434 PMID:331922198 PMID:36883528 PMID:37291214 In humans, deuterosomal cells have been noted to have enriched expression of the following: PLK4, FOXJ1, DEUP1, FOXN4, YPEL1, HES6 and CDC20B. Deuterosomal cells were termed after deuterosomes, the platforms of active centriole amplification. PMID:31558434 PMID:331922198 PMID:36883528 CL:4033049 A taste receptor cell that is part of a taste bud of a tongue. 2023-05-03T07:59:58Z gustatory cell of tongue taste receptor cell of tongue A taste receptor cell that is part of a taste bud of a tongue. DOI:10.1111/j.1096-3642.1981.tb01137.x PMID:10052456 PMID:28655883 http://www.nejohnston.org/Birds/documents/AvianTongues_Johnston.pdf gustatory cell of tongue DOI:10.1016/s0022-5320(69)80043-2 CL:4033050 A neuron that releases catecholamine as a neurotransmitter. 2023-05-18T12:07:45Z Frequently used when describing the developing nervous system in zebrafish. A catecholaminergic neuron expresses tyrosine hydroxylase (TH), tyrosine hydroxylase 2 (TH2), aromatic amino acid decarboxylase (AADC), dopamine b-hydroxylase (DBH), and phenylethanolamine-N-methyl transferase (PEMT), which are enzymes necessary for catecholamine synthesis. catecholaminergic neuron A neuron that releases catecholamine as a neurotransmitter. ISBN:0521442516 PMID:12094209 Frequently used when describing the developing nervous system in zebrafish. A catecholaminergic neuron expresses tyrosine hydroxylase (TH), tyrosine hydroxylase 2 (TH2), aromatic amino acid decarboxylase (AADC), dopamine b-hydroxylase (DBH), and phenylethanolamine-N-methyl transferase (PEMT), which are enzymes necessary for catecholamine synthesis. PMID:10191060 PMID:12128258 PMID:34880760 https://orcid.org/0000-0002-2244-7917 CL:4033054 A cell that is adjacent to a vessel. A perivascular cell plays a crucial role in maintaining vascular function and tissue homeostasis. This cell type regulates vessel integrity and flow dynamics. 2023-08-22T13:40:28Z perivascular cell A cell that is adjacent to a vessel. A perivascular cell plays a crucial role in maintaining vascular function and tissue homeostasis. This cell type regulates vessel integrity and flow dynamics. PMID:24928499 PMID:27889329 CL:4033081 A(n) myeloid cell that is cycling. proliferating myeloid cell cycling myeloid cell A(n) myeloid cell that is cycling. PMID:38301653 proliferating myeloid cell PMID:38301653 CL:4033093 A stem cell that is part of the corneo-scleral limbus. This cell type resides at the basal layer of the epithelium and has a small size and high nuclear to cytoplasmatic ratio (Secker and Daniels, 2009). A limbal stem cell is responsible for corneal epithelial renewal and repair (Li et al., 2023), and to help maintain a clear corneal surface by preventing conjunctival epithelial cells from migrating onto the cornea (Wang et al., 2023). 2024-12-11T13:59:19Z limbal epithelial stem cell limbal stem cell limbal epithelial stem cell of cornea A stem cell that is part of the corneo-scleral limbus. This cell type resides at the basal layer of the epithelium and has a small size and high nuclear to cytoplasmatic ratio (Secker and Daniels, 2009). A limbal stem cell is responsible for corneal epithelial renewal and repair (Li et al., 2023), and to help maintain a clear corneal surface by preventing conjunctival epithelial cells from migrating onto the cornea (Wang et al., 2023). PMID:20614614 PMID:29105366 PMID:36983561 PMID:37768272 limbal epithelial stem cell PMID:20614614 limbal stem cell PMID:17562792 CL:4040004 Any mesenchymal stem cell of adipose tissue that is part of an orbital region. 2023-09-18T10:43:00Z OAMSC Orbital ASCs orbital adipose-derived mesenchymal stem cell mesenchymal stem cell of orbital adipose tissue Any mesenchymal stem cell of adipose tissue that is part of an orbital region. OAMSC PMID:31377878 Orbital ASCs PMID:30210548 orbital adipose-derived mesenchymal stem cell PMID:31377878 CL:4047001 A(n) stromal cell that is cycling. proliferating stromal cell cycling stromal cell A(n) stromal cell that is cycling. PMID:34497389 proliferating stromal cell PMID:34497389 CL:4047002 A(n) glial cell that is cycling. proliferating glial cell cycling glial cell A(n) glial cell that is cycling. PMID:34497389 proliferating glial cell PMID:34497389 CL:4047005 A(n) neuroblast (sensu Vertebrata) that is cycling. proliferating neuroblast (sensu Vertebrata) cycling neuroblast (sensu Vertebrata) A(n) neuroblast (sensu Vertebrata) that is cycling. PMID:34497389 proliferating neuroblast (sensu Vertebrata) PMID:34497389 CL:4047023 A fibroblast located in the lamina propria of the intestinal mucosa. This cell expresses PDGFRα and CD81 and is negative for α-smooth muscle actin (α-SMA). This cell is predominantly located in the small intestine adjacent to myofibroblasts surrounding the crypts. It is capable of synthesizing extracellular matrix components and structural proteins such as collagen and elastin. 2024-09-24T15:45:18Z S1 fibroblast intestinal lamina propria fibroblast A fibroblast located in the lamina propria of the intestinal mucosa. This cell expresses PDGFRα and CD81 and is negative for α-smooth muscle actin (α-SMA). This cell is predominantly located in the small intestine adjacent to myofibroblasts surrounding the crypts. It is capable of synthesizing extracellular matrix components and structural proteins such as collagen and elastin. PMID:21252048 PMID:36032088 S1 fibroblast PMID:30270042 CL:4052002 A multinucleate cell formed by the fusion of multiple uninuclear cells through plasma membrane fusion. This process leads to a single large cell containing multiple nuclei within a shared cytoplasm. 2024-08-15T10:38:46Z syncytium syncytial cell A multinucleate cell formed by the fusion of multiple uninuclear cells through plasma membrane fusion. This process leads to a single large cell containing multiple nuclei within a shared cytoplasm. PMID:20851884 Wikipedia:Syncytium syncytium WBbt:0008074 CL:4052015 Any capillary endothelial cell that is part of an endocrine gland. 2024-09-30T15:27:49Z endocrine gland capillary endothelial cell Any capillary endothelial cell that is part of an endocrine gland. PMID:18480313 CL:4052030 A fibroblast of the adventitia of a blood vessel. This cell contributes to vascular homeostasis, remodeling, and inflammation by producing extracellular matrix components, cytokines, and growth factors. Adventitial fibroblast can transition into an activated state during injury or disease, marked by increased proliferation, migration, matrix deposition, and contractile protein expression 2024-12-05T11:01:15Z Single-cell transcriptomics of murine aorta identifies two adventitial fibroblast-specific markers, PDGFRA and DPEP1, which were validated at the protein level by immunohistochemistry and flow cytometry across human and murine arteries, highlighting fibroblast heterogeneity in health and cardiovascular disease (CVD) in humans and mice. adventitial fibroblast A fibroblast of the adventitia of a blood vessel. This cell contributes to vascular homeostasis, remodeling, and inflammation by producing extracellular matrix components, cytokines, and growth factors. Adventitial fibroblast can transition into an activated state during injury or disease, marked by increased proliferation, migration, matrix deposition, and contractile protein expression PMID:28705796 PMID:36718802 Single-cell transcriptomics of murine aorta identifies two adventitial fibroblast-specific markers, PDGFRA and DPEP1, which were validated at the protein level by immunohistochemistry and flow cytometry across human and murine arteries, highlighting fibroblast heterogeneity in health and cardiovascular disease (CVD) in humans and mice. PMID:36718802 CL:4052045 A stromal cell that is part of the ovarian stroma, characterized by its ability to synthesize steroid hormones. 2025-03-05T13:37:44Z steroidogenic interstitial stromal cell steroidogenic stromal cell Enpp2− interstitial cell steroidogenic stromal cell of ovary A stromal cell that is part of the ovarian stroma, characterized by its ability to synthesize steroid hormones. PMID:36205477 doi:/10.1101/2024.12.15.628550 steroidogenic interstitial stromal cell PMID:36205477 steroidogenic stromal cell PMID:36205477 Enpp2− interstitial cell PMID:36205477 The distribution of vacuoles into daughter cells after mitosis or meiosis, mediated by interactions between vacuoles and the cytoskeleton. biological_process GO:0000011 vacuole inheritance GO:0000011 The distribution of vacuoles into daughter cells after mitosis or meiosis, mediated by interactions between vacuoles and the cytoskeleton. GOC:mcc PMID:10873824 PMID:14616069 The cell cycle process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets. GO:0016359 Reactome:R-HSA-2500257 mitotic chromosome segregation mitotic sister-chromatid adhesion release biological_process GO:0000070 mitotic sister chromatid segregation GO:0000070 The cell cycle process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets. GOC:ai GOC:jl Reactome:R-HSA-2500257 Resolution of Sister Chromatid Cohesion The lipid bilayer surrounding any of the compartments of the Golgi apparatus. Golgi apparatus membrane cellular_component GO:0000139 Golgi membrane GO:0000139 The lipid bilayer surrounding any of the compartments of the Golgi apparatus. GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. microtubule cytoskeleton organisation biological_process microtubule cytoskeleton organization and biogenesis GO:0000226 microtubule cytoskeleton organization GO:0000226 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. GOC:mah microtubule cytoskeleton organisation GOC:mah microtubule cytoskeleton organization and biogenesis GOC:mah A chromosome that encodes the nuclear genome and is found in the nucleus of a eukaryotic cell during the cell cycle phases when the nucleus is intact. nuclear interphase chromosome cellular_component GO:0000228 nuclear chromosome GO:0000228 A chromosome that encodes the nuclear genome and is found in the nucleus of a eukaryotic cell during the cell cycle phases when the nucleus is intact. GOC:dph GOC:mah The chemical reactions and pathways resulting in the formation of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically. glycan biosynthesis glycan biosynthetic process polysaccharide anabolism polysaccharide biosynthesis polysaccharide formation polysaccharide synthesis biological_process GO:0000271 polysaccharide biosynthetic process GO:0000271 The chemical reactions and pathways resulting in the formation of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically. GOC:go_curators Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent. GO:0007067 Reactome:R-HSA-69278 Wikipedia:Mitosis biological_process mitosis GO:0000278 Note that this term should not be confused with 'GO:0140014 ; mitotic nuclear division'. 'GO:0000278 ; mitotic cell cycle represents the entire mitotic cell cycle, while 'GO:0140014 ; mitotic nuclear division' specifically represents the actual nuclear division step of the mitotic cell cycle. mitotic cell cycle GO:0000278 Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent. GOC:mah ISBN:0815316194 Reactome:R-HSA-69278 Cell Cycle, Mitotic The division of a cell nucleus into two nuclei, with DNA and other nuclear contents distributed between the daughter nuclei. biological_process karyokinesis GO:0000280 nuclear division GO:0000280 The division of a cell nucleus into two nuclei, with DNA and other nuclear contents distributed between the daughter nuclei. GOC:mah A ribosome contained within a subcellular membrane-bounded organelle. cellular_component GO:0000313 organellar ribosome GO:0000313 A ribosome contained within a subcellular membrane-bounded organelle. GOC:mah GOC:mcc The joining of 2 or more lipid bilayer membranes that surround the nucleus. biological_process GO:0000740 nuclear membrane fusion GO:0000740 The joining of 2 or more lipid bilayer membranes that surround the nucleus. GOC:elh The creation of a single nucleus from multiple nuclei as a result of fusing the lipid bilayers that surround each nuclei. GO:0007335 Wikipedia:Karyogamy nuclear fusion nuclear fusion during karyogamy biological_process GO:0000741 karyogamy GO:0000741 The creation of a single nucleus from multiple nuclei as a result of fusing the lipid bilayers that surround each nuclei. GOC:elh The formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells. cell fusion biological_process GO:0000768 syncytium formation by plasma membrane fusion GO:0000768 The formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells. GOC:mtg_muscle GOC:tb The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome. GO:0000789 GO:0000790 GO:0005717 NIF_Subcellular:sao1615953555 cytoplasmic chromatin nuclear chromatin cellular_component chromosome scaffold GO:0000785 Chromosomes include parts that are not part of the chromatin. Examples include the kinetochore. chromatin GO:0000785 The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome. GOC:elh PMID:20404130 A compact and highly condensed form of chromatin that is refractory to transcription. GO:0005720 GO:0035328 NIF_Subcellular:sao581845896 Wikipedia:Heterochromatin transcriptionally inactive chromatin transcriptionally silent chromatin nuclear heterochromatin cellular_component GO:0000792 heterochromatin GO:0000792 A compact and highly condensed form of chromatin that is refractory to transcription. PMID:32017156 The cell cycle process in which sister chromatids are organized and then physically separated and apportioned to two or more sets. biological_process GO:0000819 sister chromatid segregation GO:0000819 The cell cycle process in which sister chromatids are organized and then physically separated and apportioned to two or more sets. GOC:ai GOC:elh The developmental process in which the size or shape of a cell is generated and organized. GO:0007148 GO:0045790 GO:0045791 cellular morphogenesis biological_process GO:0000902 cell morphogenesis GO:0000902 The developmental process in which the size or shape of a cell is generated and organized. GOC:clt GOC:dph GOC:go_curators GOC:tb Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form. response to acid biological_process response to acid anion response to oxoanion GO:0001101 This term should be used to describe a response to a specific acid as a chemical. E.g., if an organism were responding to glutamate, then the response would be glutamate-specific; the organism is actually responding to the chemical structure of the anion portion of the dissociated acid. Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. If annotating experiments where an acid is playing a role as a proton donor, please annotate to GO:0010447 'response to acidic pH' instead. response to acid chemical GO:0001101 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form. GOC:go_curators GOC:rn The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton). skeletal development biological_process GO:0001501 skeletal system development GO:0001501 The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton). GOC:dph GOC:jid GOC:tb The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance. Wikipedia:Ossification bone biosynthesis bone formation osteogenesis biological_process GO:0001503 Note that this term does not have a 'developmental process' parent because ossification isn't necessarily developmental, can also occur as part of bone remodeling. Instead use 'ossification involved in bone maturation ; GO:0043931'. ossification GO:0001503 The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance. GOC:mtg_mpo PMID:17572649 A process in which membrane potential cycles through a depolarizing spike, triggered in response to depolarization above some threshold, followed by repolarization. This cycle is driven by the flow of ions through various voltage gated channels with different thresholds and ion specificities. biological_process GO:0001508 Action potentials typically propagate across excitable membranes. This class covers both action potentials that propagate and those that fail to do so. action potential GO:0001508 A process in which membrane potential cycles through a depolarizing spike, triggered in response to depolarization above some threshold, followed by repolarization. This cycle is driven by the flow of ions through various voltage gated channels with different thresholds and ion specificities. GOC:dph GOC:go_curators GOC:tb ISBN:978-0-07-139011-8 Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels. Wikipedia:Angiogenesis biological_process GO:0001525 angiogenesis GO:0001525 Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels. ISBN:0878932453 Cell motility due to movement of eukaryotic cilia or bacterial-type flagella or archaeal-type flagella. ciliary/flagellar motility biological_process ciliary or bacterial-type flagellar motility GO:0001539 Note that we deem eukaryotic cilia and microtubule-based flagella to be equivalent, while the bacterial- and archaeal-type flagella have a different structure. The former are microtubule-based structures that lash back and forth and are present only in eukaryotes, while the latter achieve motility by rotation. Bacterial- and archaeal-type flagella are superficially similar but have a different molecular composition and fine structure. These three structures never co-exist in the same organism. Therefore, GO:0001539 'cilium or flagellum-dependent cell motility' is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term. Direct annotations to GO:0001539 'cilium or flagellum-dependent cell motility' may be amended during annotation QC. cilium or flagellum-dependent cell motility GO:0001539 Cell motility due to movement of eukaryotic cilia or bacterial-type flagella or archaeal-type flagella. GOC:cilia GOC:hjd GOC:krc The developmental growth process in which an oocyte irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present. biological_process GO:0001555 oocyte growth GO:0001555 The developmental growth process in which an oocyte irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present. https://www.ncbi.nlm.nih.gov/books/NBK279054/ A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization. Wikipedia:Oocyte_maturation biological_process GO:0001556 oocyte maturation GO:0001556 A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization. GOC:devbiol https://www.ncbi.nlm.nih.gov/books/NBK279054/ Any process that modulates the frequency, rate, extent or direction of cell growth. biological_process GO:0001558 regulation of cell growth GO:0001558 Any process that modulates the frequency, rate, extent or direction of cell growth. GOC:go_curators Any process in which external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time. interpretation of external signals that regulate cell growth regulation of cell growth by detection of exogenous stimulus regulation of cell growth by sensing of exogenous stimulus regulation of growth by exogenous signal regulation of growth by exogenous stimuli regulation of growth by exogenous stimulus regulation of growth by external signal regulation of growth by external stimuli regulation of growth by external stimulus biological_process GO:0001560 regulation of cell growth by extracellular stimulus GO:0001560 Any process in which external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time. GOC:dph The process whose specific outcome is the progression of a blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood. biological_process GO:0001568 blood vessel development GO:0001568 The process whose specific outcome is the progression of a blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood. GOC:hjd UBERON:0001981 The process of coordinated growth and sprouting of blood vessels giving rise to the organized vascular system. patterning of blood vessels biological_process GO:0001569 branching involved in blood vessel morphogenesis GO:0001569 The process of coordinated growth and sprouting of blood vessels giving rise to the organized vascular system. GOC:dph patterning of blood vessels GOC:dph The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes. Wikipedia:Vasculogenesis vascular morphogenesis biological_process GO:0001570 vasculogenesis GO:0001570 The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes. PMID:8999798 A process that results in a parallel arrangement of microtubules. microtubule bundling biological_process GO:0001578 microtubule bundle formation GO:0001578 A process that results in a parallel arrangement of microtubules. GOC:dph The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight. GO:0042460 Wikipedia:Eye_development biological_process GO:0001654 eye development GO:0001654 The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight. GOC:jid GOC:jl A homeostatic process in which an organism modulates its internal body temperature. Wikipedia:Thermoregulation thermoregulation biological_process GO:0001659 temperature homeostasis GO:0001659 A homeostatic process in which an organism modulates its internal body temperature. GOC:jl thermoregulation GOC:dph GOC:tb Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level. response to hypoxic stress response to lowered oxygen tension response to intermittent hypoxia response to sustained hypoxia biological_process GO:0001666 Note that this term should not be confused with 'response to anoxia ; GO:0034059'. Note that in laboratory studies, hypoxia is typically studied at O2 concentrations ranging from 0.1 - 5%. response to hypoxia GO:0001666 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level. GOC:hjd Cell migration that is accomplished by extension and retraction of a pseudopodium. ameboid cell migration amoeboid cell migration amoeboidal cell migration biological_process GO:0001667 Note that this term refers to a mode of migration rather than to any particular cell type. ameboidal-type cell migration GO:0001667 Cell migration that is accomplished by extension and retraction of a pseudopodium. GOC:dph The nucleus of the female germ cell, a reproductive cell in females. GO:0043080 female germ-cell nucleus cellular_component GO:0001674 female germ cell nucleus GO:0001674 The nucleus of the female germ cell, a reproductive cell in females. CL:0000021 GOC:hjd Formation of a complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2 (either eIF2 in eukaryotes, or IF2 in prokaryotes). In prokaryotes, fMet-tRNA (initiator) is used rather than Met-tRNA (initiator). translation initiation ternary complex assembly biological_process GO:0001677 formation of translation initiation ternary complex GO:0001677 Formation of a complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2 (either eIF2 in eukaryotes, or IF2 in prokaryotes). In prokaryotes, fMet-tRNA (initiator) is used rather than Met-tRNA (initiator). GOC:hjd The regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion. hydrochloric acid secretion biological_process GO:0001696 gastric acid secretion GO:0001696 The regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion. GOC:hjd The process whose specific outcome is the progression of the embryo over time, from zygote formation through syncytial blastoderm to the hatching of the first instar larva. An example of this process is found in Drosophila melanogaster. biological_process GO:0001700 embryonic development via the syncytial blastoderm GO:0001700 The process whose specific outcome is the progression of the embryo over time, from zygote formation through syncytial blastoderm to the hatching of the first instar larva. An example of this process is found in Drosophila melanogaster. GOC:go_curators GOC:mtg_sensu The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth. An example of this process is found in Mus musculus. biological_process GO:0001701 in utero embryonic development GO:0001701 The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth. An example of this process is found in Mus musculus. GOC:go_curators GOC:mtg_sensu The formation of the ectoderm, mesoderm and endoderm during gastrulation. biological_process GO:0001704 formation of primary germ layer GO:0001704 The formation of the ectoderm, mesoderm and endoderm during gastrulation. GOC:go_curators The formation of ectoderm during gastrulation. biological_process GO:0001705 ectoderm formation GO:0001705 The formation of ectoderm during gastrulation. GOC:go_curators The formation of the endoderm during gastrulation. Reactome:R-HSA-9823730 endoblast formation biological_process GO:0001706 endoderm formation GO:0001706 The formation of the endoderm during gastrulation. GOC:go_curators Reactome:R-HSA-9823730 Formation of definitive endoderm endoblast formation GOC:dph GOC:sdb_2009 GOC:tb The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts. biological_process GO:0001707 mesoderm formation GO:0001707 The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts. GOC:go_curators The initial developmental process that will lead to the formation of an eye. biological_process optic placode formation GO:0001743 lens placode formation GO:0001743 The initial developmental process that will lead to the formation of an eye. GOC:dph The morphogenetic process in which the anatomical structures of the compound eye are generated and organized. The adult compound eye is a precise assembly of 700-800 ommatidia. Each ommatidium is composed of 20 cells, identified by cell type and position. An example of compound eye morphogenesis is found in Drosophila melanogaster. insect-type retina morphogenesis biological_process GO:0001745 compound eye morphogenesis GO:0001745 The morphogenetic process in which the anatomical structures of the compound eye are generated and organized. The adult compound eye is a precise assembly of 700-800 ommatidia. Each ommatidium is composed of 20 cells, identified by cell type and position. An example of compound eye morphogenesis is found in Drosophila melanogaster. GOC:dph GOC:mtg_sensu insect-type retina morphogenesis PMID:11735386 The process in which a relatively unspecialized cell acquires the specialized features of an eye photoreceptor cell. biological_process GO:0001751 compound eye photoreceptor cell differentiation GO:0001751 The process in which a relatively unspecialized cell acquires the specialized features of an eye photoreceptor cell. GOC:go_curators The process in which a relatively unspecialized cell acquires the specialized features of a photoreceptor cell, as found in the eye, the primary visual organ of most organisms. biological_process GO:0001754 eye photoreceptor cell differentiation GO:0001754 The process in which a relatively unspecialized cell acquires the specialized features of a photoreceptor cell, as found in the eye, the primary visual organ of most organisms. GOC:go_curators The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo. biological_process GO:0001755 neural crest cell migration GO:0001755 The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo. GOC:ascb_2009 GOC:dph GOC:tb ISBN:0878932437 The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo. Reactome:R-HSA-9824272 Wikipedia:Somitogenesis biological_process GO:0001756 somitogenesis GO:0001756 The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo. ISBN:0721662544 Reactome:R-HSA-9824272 Somitogenesis The process in which the anatomical structures of branches are generated and organized. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes. branching morphogenesis biological_process GO:0001763 morphogenesis of a branching structure GO:0001763 The process in which the anatomical structures of branches are generated and organized. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes. ISBN:0721662544 branching morphogenesis GOC:dph The characteristic movement of an immature neuron from germinal zones to specific positions where they will reside as they mature. Wikipedia:Neural_development#Neuron_migration Wikipedia:Neuron_migration neuron chemotaxis neuronal migration biological_process neuron guidance GO:0001764 neuron migration GO:0001764 The characteristic movement of an immature neuron from germinal zones to specific positions where they will reside as they mature. CL:0000540 GOC:go_curators The directed orientation of lymphocyte signaling molecules and associated membrane rafts towards a chemokine gradient or a contact point with an appropriate activating cell. lymphocyte polarization biological_process GO:0001767 establishment of lymphocyte polarity GO:0001767 The directed orientation of lymphocyte signaling molecules and associated membrane rafts towards a chemokine gradient or a contact point with an appropriate activating cell. GOC:mgi_curators PMID:11244041 PMID:12615889 A multicellular organismal process by which exposure to an activating factor such as a cellular or soluble ligand results in a change in the morphology or behavior of a cell. biological_process GO:0001775 cell activation GO:0001775 A multicellular organismal process by which exposure to an activating factor such as a cellular or soluble ligand results in a change in the morphology or behavior of a cell. GOC:mgi_curators The process of regulating the proliferation and elimination of cells of the immune system such that the total number of cells of a particular cell type within a whole or part of an organism is stable over time in the absence of an outside stimulus. immune cell homeostasis leucocyte homeostasis biological_process GO:0001776 Note that this term represents the return of immune system cell levels to stable numbers following an immune response as well as the proliferation and elimination of cells of the immune system required to maintain stable numbers in the absence of an outside stimulus. leukocyte homeostasis GO:0001776 The process of regulating the proliferation and elimination of cells of the immune system such that the total number of cells of a particular cell type within a whole or part of an organism is stable over time in the absence of an outside stimulus. GOC:add ISBN:0781735149 The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. GO:0042032 GO:0042089 GO:0042107 GO:0050663 cytokine biosynthetic process cytokine metabolic process cytokine secretion interferon production interferon secretion interleukin production interleukin secretion biological_process GO:0001816 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select one of the 'regulation' children terms. cytokine production GO:0001816 The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. GOC:add ISBN:0781735149 interferon production GOC:add GOC:mah interferon secretion GOC:add GOC:mah interleukin production GOC:add GOC:mah http://wiki.geneontology.org/index.php/Why_isn%27t_interleukin_in_GO%3F interleukin secretion GOC:add GOC:mah http://wiki.geneontology.org/index.php/Why_isn%27t_interleukin_in_GO%3F Any process that modulates the frequency, rate, or extent of production of a cytokine. GO:0042035 GO:0050707 regulation of cytokine anabolism regulation of cytokine biosynthesis regulation of cytokine formation regulation of cytokine synthesis regulation of cytokine biosynthetic process regulation of cytokine secretion biological_process GO:0001817 regulation of cytokine production GO:0001817 Any process that modulates the frequency, rate, or extent of production of a cytokine. GOC:add ISBN:0781735149 Any process that stops, prevents, or reduces the rate of production of a cytokine. GO:0042036 GO:0050710 down regulation of cytokine biosynthetic process down regulation of cytokine production down-regulation of cytokine biosynthetic process down-regulation of cytokine production downregulation of cytokine biosynthetic process downregulation of cytokine production negative regulation of cytokine anabolism negative regulation of cytokine biosynthesis negative regulation of cytokine formation negative regulation of cytokine synthesis inhibition of cytokine biosynthetic process inhibition of cytokine production negative regulation of cytokine biosynthetic process negative regulation of cytokine secretion biological_process GO:0001818 negative regulation of cytokine production GO:0001818 Any process that stops, prevents, or reduces the rate of production of a cytokine. GOC:add ISBN:0781735149 Any process that activates or increases the frequency, rate or extent of production of a cytokine. GO:0042108 GO:0050715 up regulation of cytokine production up-regulation of cytokine production upregulation of cytokine production activation of cytokine production positive regulation of cytokine biosynthetic process positive regulation of cytokine secretion stimulation of cytokine production biological_process GO:0001819 positive regulation of cytokine production GO:0001819 Any process that activates or increases the frequency, rate or extent of production of a cytokine. GOC:add ISBN:0781735149 The regulated release of serotonin by a cell. Serotonin (5-hydroxytryptamine, or 5-HT) is a monoamine synthesized in serotonergic neurons in the central nervous system, enterochromaffin cells in the gastrointestinal tract and some immune system cells. 5-HT secretion 5-hydroxytryptamine secretion biological_process serotonin release GO:0001820 serotonin secretion GO:0001820 The regulated release of serotonin by a cell. Serotonin (5-hydroxytryptamine, or 5-HT) is a monoamine synthesized in serotonergic neurons in the central nervous system, enterochromaffin cells in the gastrointestinal tract and some immune system cells. GOC:ef ISBN:0198506732 ISBN:0781735149 serotonin release GOC:tb The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm. The blastula follows the morula and precedes the gastrula in the developmental sequence. biological_process blastula development GO:0001824 See also the Anatomical Dictionary for Mouse Development ontology terms 'TS5, embryo ; EMAP:23', 'TS5, inner cell mass ; EMAP:24' and 'TS5, trophectoderm; EMAP:28'. blastocyst development GO:0001824 The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm. The blastula follows the morula and precedes the gastrula in the developmental sequence. GOC:dph ISBN:0124020607 ISBN:0198542771 The initial formation of a blastocyst from a solid ball of cells known as a morula. biological_process blastula formation GO:0001825 See also the Anatomical Dictionary for Mouse Development ontology term 'TS3, compacted morula ; EMAP:9'. blastocyst formation GO:0001825 The initial formation of a blastocyst from a solid ball of cells known as a morula. GOC:dph ISBN:0124020607 ISBN:0198542771 The process in which a relatively unspecialized cell acquires specialized features of an inner cell mass cell. biological_process GO:0001826 See also the Anatomical Dictionary for Mouse Development ontology terms 'TS4, inner cell mass ; EMAP:14'. inner cell mass cell differentiation GO:0001826 The process in which a relatively unspecialized cell acquires specialized features of an inner cell mass cell. GOC:dph ISBN:0124020607 ISBN:0198542771 The process in which a relatively unspecialized cell acquires the specialized features of a trophectoderm cell. trophectoderm cell differentiation biological_process GO:0001829 See also the Anatomical Dictionary for Mouse Development ontology terms 'TS4, trophectoderm ; EMAP:19'. trophectodermal cell differentiation GO:0001829 The process in which a relatively unspecialized cell acquires the specialized features of a trophectoderm cell. GOC:dph ISBN:0124020607 ISBN:0198542771 The morphogenesis of trophectoderm cells. trophectoderm cellular morphogenesis biological_process GO:0001831 See also the Anatomical Dictionary for Mouse Development ontology terms 'TS4, trophectoderm ; EMAP:19', 'TS5, trophectoderm ; EMAP:28' and 'TS6, trophectoderm ; EMAP:39'. trophectodermal cellular morphogenesis GO:0001831 The morphogenesis of trophectoderm cells. GOC:dph ISBN:0124020607 ISBN:0198542771 An increase in size of a blastocyst due to expansion of the blastocoelic cavity cell shape changes and cell proliferation. biological_process blastula growth GO:0001832 See also the Anatomical Dictionary for Mouse Development ontology terms 'TS4, blastocoelic cavity ; EMAP:17', 'TS5, blastocoelic cavity ; EMAP:27' and 'TS6, blastocoelic cavity ; EMAP:36'. blastocyst growth GO:0001832 An increase in size of a blastocyst due to expansion of the blastocoelic cavity cell shape changes and cell proliferation. GOC:dph ISBN:0124020607 ISBN:0198542771 The proliferation of cells in the inner cell mass. biological_process GO:0001833 See also the Anatomical Dictionary for Mouse Development ontology terms 'TS4, inner cell mass ; EMAP:14' and 'TS5, inner cell mass ; EMAP:24'. inner cell mass cell proliferation GO:0001833 The proliferation of cells in the inner cell mass. GOC:dph GOC:isa_complete ISBN:0124020607 ISBN:0198542771 The proliferation of cells in the trophectoderm. trophectoderm cell proliferation biological_process GO:0001834 See also the Anatomical Dictionary for Mouse Development ontology terms 'TS4, trophectoderm ; EMAP:19', 'TS5, trophectoderm ; EMAP:28' and 'TS6, trophectoderm ; EMAP:39'. trophectodermal cell proliferation GO:0001834 The proliferation of cells in the trophectoderm. GOC:dph ISBN:0124020607 ISBN:0198542771 A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. Reactome:R-HSA-9758919 EMT epithelial-mesenchymal transition mesenchymal cell differentiation from epithelial cell biological_process GO:0001837 epithelial to mesenchymal transition GO:0001837 A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. GOC:dph PMID:14701881 Reactome:R-HSA-9758919 Epithelial-Mesenchymal Transition (EMT) during gastrulation mesenchymal cell differentiation from epithelial cell GOC:BHF GOC:dph GOC:rl The morphogenesis of an embryonic epithelium into a tube-shaped structure. biological_process GO:0001838 embryonic epithelial tube formation GO:0001838 The morphogenesis of an embryonic epithelium into a tube-shaped structure. GOC:dph ISBN:0824072820 The process in which the anatomical structures of the neural plate are generated and organized. The neural plate is a specialized region of columnar epithelial cells in the dorsal ectoderm that will give rise to nervous system tissue. biological_process GO:0001839 neural plate morphogenesis GO:0001839 The process in which the anatomical structures of the neural plate are generated and organized. The neural plate is a specialized region of columnar epithelial cells in the dorsal ectoderm that will give rise to nervous system tissue. GOC:dph ISBN:0878932437 The process whose specific outcome is the progression of the neural plate over time, from its formation to the mature structure. The neural plate is a flat, thickened layer of ectodermal cells. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system. biological_process GO:0001840 neural plate development GO:0001840 The process whose specific outcome is the progression of the neural plate over time, from its formation to the mature structure. The neural plate is a flat, thickened layer of ectodermal cells. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system. GOC:dph GOC:ef ISBN:0878932437 ISBN:0878932585 The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system. GO:0001679 Wikipedia:Neurulation neural tube morphogenesis neurulation biological_process GO:0001841 neural tube formation GO:0001841 The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system. GOC:dph ISBN:0878932437 neural tube morphogenesis GOC:dph The process in which the neural fold is formed. The edges of the neural plate thicken and move up to form a U-shaped structure called the neural groove. biological_process neural groove formation GO:0001842 neural fold formation GO:0001842 The process in which the neural fold is formed. The edges of the neural plate thicken and move up to form a U-shaped structure called the neural groove. GOC:dph ISBN:0878932437 neural groove formation GOC:dph The progression of an endothelial cell over time, from its formation to the mature structure. biological_process GO:0001885 endothelial cell development GO:0001885 The progression of an endothelial cell over time, from its formation to the mature structure. GOC:dph The change in form (cell shape and size) that occurs during the differentiation of an endothelial cell. biological_process GO:0001886 endothelial cell morphogenesis GO:0001886 The change in form (cell shape and size) that occurs during the differentiation of an endothelial cell. GOC:ascb_2009 GOC:dph GOC:tb The multiplication or reproduction of endothelial cells, resulting in the expansion of a cell population. Endothelial cells are thin flattened cells which line the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium. biological_process GO:0001935 endothelial cell proliferation GO:0001935 The multiplication or reproduction of endothelial cells, resulting in the expansion of a cell population. Endothelial cells are thin flattened cells which line the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium. GOC:add ISBN:0781735149 Any process that modulates the frequency, rate, or extent of endothelial cell proliferation. biological_process GO:0001936 regulation of endothelial cell proliferation GO:0001936 Any process that modulates the frequency, rate, or extent of endothelial cell proliferation. GOC:add Any process that stops, prevents, or reduces the rate or extent of endothelial cell proliferation. down regulation of endothelial cell proliferation down-regulation of endothelial cell proliferation downregulation of endothelial cell proliferation inhibition of endothelial cell proliferation biological_process GO:0001937 negative regulation of endothelial cell proliferation GO:0001937 Any process that stops, prevents, or reduces the rate or extent of endothelial cell proliferation. GOC:add Any process that activates or increases the rate or extent of endothelial cell proliferation. up regulation of endothelial cell proliferation up-regulation of endothelial cell proliferation upregulation of endothelial cell proliferation activation of endothelial cell proliferation stimulation of endothelial cell proliferation biological_process GO:0001938 positive regulation of endothelial cell proliferation GO:0001938 Any process that activates or increases the rate or extent of endothelial cell proliferation. GOC:add The process whose specific outcome is the progression of the vasculature over time, from its formation to the mature structure. The vasculature is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the organism. biological_process vascular system development GO:0001944 vasculature development GO:0001944 The process whose specific outcome is the progression of the vasculature over time, from its formation to the mature structure. The vasculature is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the organism. GOC:dph UBERON:0002409 A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state. biological_process GO:0001955 blood vessel maturation GO:0001955 A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state. GOC:dph Any process that activates or increases the frequency, rate or extent of the regulated release of a neurotransmitter. up regulation of neurotransmitter secretion up-regulation of neurotransmitter secretion upregulation of neurotransmitter secretion activation of neurotransmitter secretion stimulation of neurotransmitter secretion biological_process GO:0001956 positive regulation of neurotransmitter secretion GO:0001956 Any process that activates or increases the frequency, rate or extent of the regulated release of a neurotransmitter. GOC:hjd Direct ossification that occurs within mesenchyme or an accumulation of relatively unspecialized cells. Wikipedia:Intramembranous_ossification dermal ossification biological_process intramembranous bone ossification GO:0001957 An instance of intramembranous ossification may also be classified as metaplastic; the former classifies based on tissue type location, and the latter based on mechanism/cell division. intramembranous ossification GO:0001957 Direct ossification that occurs within mesenchyme or an accumulation of relatively unspecialized cells. ISBN:0878932437 dermal ossification GO_REF:0000034 intramembranous bone ossification GOC:cjm The process in which the anatomical structures of epithelia are generated and organized. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube. epithelium morphogenesis biological_process GO:0002009 morphogenesis of an epithelium GO:0002009 The process in which the anatomical structures of epithelia are generated and organized. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube. GOC:dph GOC:jl GOC:tb ISBN:0198506732 The process in which the anatomical structures of an epithelial sheet are generated and organized. An epithelial sheet is a flat surface consisting of closely packed epithelial cells. biological_process GO:0002011 morphogenesis of an epithelial sheet GO:0002011 The process in which the anatomical structures of an epithelial sheet are generated and organized. An epithelial sheet is a flat surface consisting of closely packed epithelial cells. GOC:jl Any process that modulates the frequency or rate of heart contraction. cardiac chronotropy regulation of heart contraction rate regulation of rate of heart contraction biological_process GO:0002027 regulation of heart rate GO:0002027 Any process that modulates the frequency or rate of heart contraction. GOC:dph GOC:tb PMID:10358008 cardiac chronotropy GOC:dph GOC:tb Any process that activates or increases the rate of neuroblast proliferation. up regulation of neuroblast proliferation up-regulation of neuroblast proliferation upregulation of neuroblast proliferation activation of neuroblast proliferation stimulation of neuroblast proliferation biological_process GO:0002052 positive regulation of neuroblast proliferation GO:0002052 Any process that activates or increases the rate of neuroblast proliferation. GOC:dph The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells. up regulation of mesenchymal cell proliferation up-regulation of mesenchymal cell proliferation upregulation of mesenchymal cell proliferation activation of mesenchymal cell proliferation stimulation of mesenchymal cell proliferation biological_process GO:0002053 positive regulation of mesenchymal cell proliferation GO:0002053 The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells. GOC:dph The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage. biological_process GO:0002062 chondrocyte differentiation GO:0002062 The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage. GOC:dph The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate. biological_process GO:0002063 chondrocyte development GO:0002063 The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate. GOC:dph The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface. biological_process GO:0002064 epithelial cell development GO:0002064 The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface. GOC:dph The process in which a relatively unspecialized cell acquires specialized features of a columnar/cuboidal epithelial cell. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube. biological_process GO:0002065 columnar/cuboidal epithelial cell differentiation GO:0002065 The process in which a relatively unspecialized cell acquires specialized features of a columnar/cuboidal epithelial cell. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube. GOC:dph The process whose specific outcome is the progression of a columnar/cuboidal epithelial cell over time, from its formation to the mature structure. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube. biological_process GO:0002066 columnar/cuboidal epithelial cell development GO:0002066 The process whose specific outcome is the progression of a columnar/cuboidal epithelial cell over time, from its formation to the mature structure. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube. GOC:dph The process in which a relatively unspecialized cell acquires specialized features of a glandular epithelial cell. A glandular epithelial cell is a columnar/cuboidal epithelial cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland. biological_process GO:0002067 glandular epithelial cell differentiation GO:0002067 The process in which a relatively unspecialized cell acquires specialized features of a glandular epithelial cell. A glandular epithelial cell is a columnar/cuboidal epithelial cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland. GOC:dph The process whose specific outcome is the progression of a glandular epithelial cell over time, from its formation to the mature structure. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland. biological_process GO:0002068 glandular epithelial cell development GO:0002068 The process whose specific outcome is the progression of a glandular epithelial cell over time, from its formation to the mature structure. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland. GOC:dph The developmental process, independent of morphogenetic (shape) change, that is required for a columna/cuboidal epithelial cell to attain its fully functional state. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube. biological_process GO:0002069 columnar/cuboidal epithelial cell maturation GO:0002069 The developmental process, independent of morphogenetic (shape) change, that is required for a columna/cuboidal epithelial cell to attain its fully functional state. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube. GOC:dph The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell to attain its fully functional state. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface. biological_process GO:0002070 epithelial cell maturation GO:0002070 The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell to attain its fully functional state. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface. GOC:dph The developmental process, independent of morphogenetic (shape) change, that is required for a glandular epithelial cell to attain its fully functional state. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland. biological_process GO:0002071 glandular epithelial cell maturation GO:0002071 The developmental process, independent of morphogenetic (shape) change, that is required for a glandular epithelial cell to attain its fully functional state. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland. GOC:dph The invagination of the optic vesicle to form two-walled indentations, the optic cups, that will go on to form the retina. This process begins with the optic vesicle becoming a two-walled structure and its subsequent shape changes. It does not include the fate commitment of cells to become the pigmented retina and the neural retina. An example of this process is found in Mus musculus. optic cup morphogenesis involved in camera-style eye development biological_process GO:0002072 optic cup morphogenesis involved in camera-type eye development GO:0002072 The invagination of the optic vesicle to form two-walled indentations, the optic cups, that will go on to form the retina. This process begins with the optic vesicle becoming a two-walled structure and its subsequent shape changes. It does not include the fate commitment of cells to become the pigmented retina and the neural retina. An example of this process is found in Mus musculus. GOC:dph GOC:mtg_sensu GOC:sdb_2009 GOC:tb ISBN:0878932437 Any process that prevents the activation of neuroepithelial cell differentiation. Neuroepithelial cell differentiation is the process in which epiblast cells acquire specialized features of neuroepithelial cells. negative regulation of neural plate formation repression of premature neural plate formation biological_process GO:0002085 inhibition of neuroepithelial cell differentiation GO:0002085 Any process that prevents the activation of neuroepithelial cell differentiation. Neuroepithelial cell differentiation is the process in which epiblast cells acquire specialized features of neuroepithelial cells. GOC:dph PMID:16678814 negative regulation of neural plate formation GOC:dph GOC:tb repression of premature neural plate formation GOC:dph GOC:tb A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates. neurological control of breathing regulation of respiratory gaseous exchange by neurological system process biological_process GO:0002087 regulation of respiratory gaseous exchange by nervous system process GO:0002087 A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates. GOC:dph GOC:tb PMID:12458206 neurological control of breathing GOC:dph GOC:tb The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina. An example of this process is found in Mus musculus. lens development lens development in camera-style eye biological_process GO:0002088 lens development in camera-type eye GO:0002088 The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina. An example of this process is found in Mus musculus. GOC:dph ISBN:0582064333 The process in which the anatomical structures of the lens are generated and organized. The lens is a transparent structure in the eye through which light is focused onto the retina. An example of this process is found in Mus musculus. lens morphogenesis lens morphogenesis in camera-style eye biological_process GO:0002089 lens morphogenesis in camera-type eye GO:0002089 The process in which the anatomical structures of the lens are generated and organized. The lens is a transparent structure in the eye through which light is focused onto the retina. An example of this process is found in Mus musculus. GOC:dph GOC:mtg_sensu The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein. hjd 2011-06-09T03:11:53Z biological_process GO:0002181 Note that this term applies to translation performed by cytoplasmic ribosomes, which is distinct from translation performed by organellar ribosomes. For mitochondrial translation, consider GO:0032543 'mitochondrial translation' or its child terms. cytoplasmic translation GO:0002181 The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein. GOC:hjd The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis in the cytoplasm. hjd 2011-06-09T03:14:42Z biological_process GO:0002182 cytoplasmic translational elongation GO:0002182 The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis in the cytoplasm. GOC:hjd The process preceding formation of the peptide bond between the first two amino acids of a protein in the cytoplasm. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA. hjd 2011-06-09T03:15:48Z biological_process GO:0002183 cytoplasmic translational initiation GO:0002183 The process preceding formation of the peptide bond between the first two amino acids of a protein in the cytoplasm. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA. GOC:hjd The process resulting in the release of a polypeptide chain from the ribosome in the cytoplasm, usually in response to a termination codon. hjd 2011-06-09T03:17:13Z biological_process GO:0002184 cytoplasmic translational termination GO:0002184 The process resulting in the release of a polypeptide chain from the ribosome in the cytoplasm, usually in response to a termination codon. GOC:hjd A response to protect an organism from a directly detected or perceived external threat from an insect or insects to that organism. GO:0002214 physiological defense response to insect biological_process GO:0002213 defense response to insect GO:0002213 A response to protect an organism from a directly detected or perceived external threat from an insect or insects to that organism. GOC:add The process in which precursor cell type acquires the specialized features of a hematopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells. haematopoietic progenitor cell differentiation haemopoietic progenitor cell differentiation hemopoietic progenitor cell differentiation biological_process GO:0002244 hematopoietic progenitor cell differentiation GO:0002244 The process in which precursor cell type acquires the specialized features of a hematopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells. GOC:add GOC:rl ISBN:0781735149 PMID:16551251 Any process of the immune system that executes a component of an immune response. An effector immune process takes place after its activation. biological_process GO:0002252 immune effector process GO:0002252 Any process of the immune system that executes a component of an immune response. An effector immune process takes place after its activation. GOC:add GO_REF:0000022 ISBN:0781735149 The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus. biological_process GO:0002260 lymphocyte homeostasis GO:0002260 The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus. GOC:add PMID:15826826 PMID:16319493 PMID:16551252 PMID:16551262 The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus. biological_process GO:0002262 myeloid cell homeostasis GO:0002262 The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus. CL:0000763 GOC:add A change in the morphology or behavior of a leukocyte resulting from exposure to an activating factor such as a cellular or soluble ligand, leading to the initiation or perpetuation of an inflammatory response. biological_process immune cell activation during inflammatory response leukocyte activation during inflammatory response GO:0002269 leukocyte activation involved in inflammatory response GO:0002269 A change in the morphology or behavior of a leukocyte resulting from exposure to an activating factor such as a cellular or soluble ligand, leading to the initiation or perpetuation of an inflammatory response. GOC:add ISBN:0781735149 leukocyte activation during inflammatory response GOC:tb A change in the morphology or behavior of a myeloid leukocyte resulting from exposure to an activating factor such as a cellular or soluble ligand. myeloid leucocyte activation biological_process GO:0002274 myeloid leukocyte activation GO:0002274 A change in the morphology or behavior of a myeloid leukocyte resulting from exposure to an activating factor such as a cellular or soluble ligand. GOC:add ISBN:0781735149 The process in which a precursor cell type acquires the specialized features of a myeloid progenitor cell. Myeloid progenitor cells include progenitor cells for any of the myeloid lineages. biological_process GO:0002318 myeloid progenitor cell differentiation GO:0002318 The process in which a precursor cell type acquires the specialized features of a myeloid progenitor cell. Myeloid progenitor cells include progenitor cells for any of the myeloid lineages. GOC:add PMID:16551264 The process in which a precursor cell type acquires the specialized features of a lymphoid progenitor cell. Lymphoid progenitor cells include progenitor cells for any of the lymphoid lineages. biological_process GO:0002320 lymphoid progenitor cell differentiation GO:0002320 The process in which a precursor cell type acquires the specialized features of a lymphoid progenitor cell. Lymphoid progenitor cells include progenitor cells for any of the lymphoid lineages. GOC:add PMID:16551251 PMID:16551264 The synthesis or release of serotonin following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels. serotonin production involved in acute inflammatory response biological_process GO:0002351 serotonin production involved in inflammatory response GO:0002351 The synthesis or release of serotonin following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels. GOC:add ISBN:0781735149 PMID:16730260 Any process involved in the development or functioning of the immune system, an organismal system for calibrated responses to potential internal or invasive threats. Wikipedia:Immune_system biological_process GO:0002376 Note that this term is a direct child of 'biological_process ; GO:0008150' because some immune system processes are types of cellular process (GO:0009987), whereas others are types of multicellular organism process (GO:0032501). immune system process GO:0002376 Any process involved in the development or functioning of the immune system, an organismal system for calibrated responses to potential internal or invasive threats. GOC:add GO_REF:0000022 The regulated release of serotonin by a cell as part of an inflammatory response. serotonin secretion involved in acute inflammatory response biological_process serotonin release involved in inflammatory response GO:0002442 serotonin secretion involved in inflammatory response GO:0002442 The regulated release of serotonin by a cell as part of an inflammatory response. GOC:add ISBN:0781735149 serotonin release involved in inflammatory response GOC:tb Any process involved in the carrying out of an immune response by a leukocyte. GO:0019723 GO:0042087 immune cell effector process immune cell mediated immunity leucocyte immune effector process leucocyte mediated immunity leukocyte immune effector process biological_process cell-mediated immune response cellular immune response GO:0002443 leukocyte mediated immunity GO:0002443 Any process involved in the carrying out of an immune response by a leukocyte. GOC:add GO_REF:0000022 ISBN:0781735149 Any process involved in the carrying out of an immune response by a myeloid leukocyte. myeloid leucocyte immune effector process myeloid leucocyte mediated immunity myeloid leukocyte immune effector process biological_process GO:0002444 myeloid leukocyte mediated immunity GO:0002444 Any process involved in the carrying out of an immune response by a myeloid leukocyte. GOC:add GO_REF:0000022 ISBN:0781735149 Any process involved in the carrying out of an immune response by a lymphocyte. cell-mediated immunity cellular immune response biological_process GO:0002449 lymphocyte mediated immunity GO:0002449 Any process involved in the carrying out of an immune response by a lymphocyte. GOC:add GO_REF:0000022 ISBN:0781735149 The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process. biological_process GO:0002520 immune system development GO:0002520 The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process. GOC:add GOC:dph The process in which a relatively unspecialized hemopoietic precursor cell acquires the specialized features of a leukocyte. A leukocyte is an achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue. immune cell differentiation leucocyte differentiation biological_process GO:0002521 leukocyte differentiation GO:0002521 The process in which a relatively unspecialized hemopoietic precursor cell acquires the specialized features of a leukocyte. A leukocyte is an achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue. CL:0000738 GOC:add PMID:16551264 The movement of a leukocyte within or between different tissues and organs of the body contributing to an inflammatory response. biological_process immune cell migration during inflammatory response immune cell trafficking during inflammatory response leucocyte migration during inflammatory response leucocyte trafficking during inflammatory response leukocyte migration during inflammatory response leukocyte trafficking during inflammatory response GO:0002523 leukocyte migration involved in inflammatory response GO:0002523 The movement of a leukocyte within or between different tissues and organs of the body contributing to an inflammatory response. GOC:add ISBN:0781735149 PMID:14680625 PMID:14708592 PMID:7507411 PMID:8600538 leukocyte migration during inflammatory response GOC:dph The synthesis or release of any molecular mediator of the inflammatory response following an inflammatory stimulus, resulting in an increase in its intracellular or extracellular levels. production of molecular mediator involved in acute inflammatory response biological_process production of cellular mediator of acute inflammation GO:0002532 production of molecular mediator involved in inflammatory response GO:0002532 The synthesis or release of any molecular mediator of the inflammatory response following an inflammatory stimulus, resulting in an increase in its intracellular or extracellular levels. GOC:add GOC:dph GOC:tb ISBN:0781735149 The synthesis or release of a cytokine following a inflammatory stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels. cytokine production involved in acute inflammatory response biological_process GO:0002534 cytokine production involved in inflammatory response GO:0002534 The synthesis or release of a cytokine following a inflammatory stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels. GOC:add ISBN:0781735149 The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte lineage. myeloid leucocyte differentiation biological_process GO:0002573 myeloid leukocyte differentiation GO:0002573 The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte lineage. GOC:add PMID:16551251 Any process that modulates the frequency, rate, or extent of an immune system process. biological_process GO:0002682 regulation of immune system process GO:0002682 Any process that modulates the frequency, rate, or extent of an immune system process. GOC:add Any process that stops, prevents, or reduces the frequency, rate, or extent of an immune system process. down regulation of immune system process down-regulation of immune system process downregulation of immune system process inhibition of immune system process biological_process GO:0002683 negative regulation of immune system process GO:0002683 Any process that stops, prevents, or reduces the frequency, rate, or extent of an immune system process. GOC:add Any process that activates or increases the frequency, rate, or extent of an immune system process. up regulation of immune system process up-regulation of immune system process upregulation of immune system process activation of immune system process stimulation of immune system process biological_process GO:0002684 positive regulation of immune system process GO:0002684 Any process that activates or increases the frequency, rate, or extent of an immune system process. GOC:add Any process that modulates the frequency, rate, or extent of leukocyte migration. regulation of immune cell migration regulation of leucocyte migration biological_process GO:0002685 regulation of leukocyte migration GO:0002685 Any process that modulates the frequency, rate, or extent of leukocyte migration. GOC:add Any process that stops, prevents, or reduces the frequency, rate, or extent of leukocyte migration. down regulation of leukocyte migration down-regulation of leukocyte migration downregulation of leukocyte migration negative regulation of immune cell migration negative regulation of leucocyte migration inhibition of leukocyte migration biological_process GO:0002686 negative regulation of leukocyte migration GO:0002686 Any process that stops, prevents, or reduces the frequency, rate, or extent of leukocyte migration. GOC:add Any process that activates or increases the frequency, rate, or extent of leukocyte migration. positive regulation of immune cell migration positive regulation of leucocyte migration up regulation of leukocyte migration up-regulation of leukocyte migration upregulation of leukocyte migration activation of leukocyte migration stimulation of leukocyte migration biological_process GO:0002687 positive regulation of leukocyte migration GO:0002687 Any process that activates or increases the frequency, rate, or extent of leukocyte migration. GOC:add Any process that modulates the frequency, rate, or extent of leukocyte activation. regulation of immune cell activation regulation of leucocyte activation biological_process GO:0002694 regulation of leukocyte activation GO:0002694 Any process that modulates the frequency, rate, or extent of leukocyte activation. GOC:add Any process that stops, prevents, or reduces the frequency, rate, or extent of leukocyte activation. down regulation of leukocyte activation down-regulation of leukocyte activation downregulation of leukocyte activation negative regulation of immune cell activation negative regulation of leucocyte activation inhibition of leukocyte activation biological_process GO:0002695 negative regulation of leukocyte activation GO:0002695 Any process that stops, prevents, or reduces the frequency, rate, or extent of leukocyte activation. GOC:add Any process that activates or increases the frequency, rate, or extent of leukocyte activation. positive regulation of immune cell activation positive regulation of leucocyte activation up regulation of leukocyte activation up-regulation of leukocyte activation upregulation of leukocyte activation activation of leukocyte activation stimulation of leukocyte activation biological_process GO:0002696 positive regulation of leukocyte activation GO:0002696 Any process that activates or increases the frequency, rate, or extent of leukocyte activation. GOC:add Any process that modulates the frequency, rate, or extent of an immune effector process. biological_process GO:0002697 regulation of immune effector process GO:0002697 Any process that modulates the frequency, rate, or extent of an immune effector process. GOC:add Any process that stops, prevents, or reduces the frequency, rate, or extent of an immune effector process. down regulation of immune effector process down-regulation of immune effector process downregulation of immune effector process inhibition of immune effector process biological_process GO:0002698 negative regulation of immune effector process GO:0002698 Any process that stops, prevents, or reduces the frequency, rate, or extent of an immune effector process. GOC:add Any process that activates or increases the frequency, rate, or extent of an immune effector process. up regulation of immune effector process up-regulation of immune effector process upregulation of immune effector process activation of immune effector process stimulation of immune effector process biological_process GO:0002699 positive regulation of immune effector process GO:0002699 Any process that activates or increases the frequency, rate, or extent of an immune effector process. GOC:add Any process that modulates the frequency, rate, or extent of leukocyte mediated immunity. regulation of immune cell mediated immunity regulation of leucocyte mediated immunity biological_process GO:0002703 regulation of leukocyte mediated immunity GO:0002703 Any process that modulates the frequency, rate, or extent of leukocyte mediated immunity. GOC:add Any process that stops, prevents, or reduces the frequency, rate, or extent of leukocyte mediated immunity. down regulation of leukocyte mediated immunity down-regulation of leukocyte mediated immunity downregulation of leukocyte mediated immunity negative regulation of immune cell mediated immunity negative regulation of leucocyte mediated immunity inhibition of leukocyte mediated immunity biological_process GO:0002704 negative regulation of leukocyte mediated immunity GO:0002704 Any process that stops, prevents, or reduces the frequency, rate, or extent of leukocyte mediated immunity. GOC:add Any process that activates or increases the frequency, rate, or extent of leukocyte mediated immunity. positive regulation of immune cell mediated immunity positive regulation of leucocyte mediated immunity up regulation of leukocyte mediated immunity up-regulation of leukocyte mediated immunity upregulation of leukocyte mediated immunity activation of leukocyte mediated immunity stimulation of leukocyte mediated immunity biological_process GO:0002705 positive regulation of leukocyte mediated immunity GO:0002705 Any process that activates or increases the frequency, rate, or extent of leukocyte mediated immunity. GOC:add Any process that modulates the frequency, rate, or extent of lymphocyte mediated immunity. biological_process GO:0002706 regulation of lymphocyte mediated immunity GO:0002706 Any process that modulates the frequency, rate, or extent of lymphocyte mediated immunity. GOC:add Any process that stops, prevents, or reduces the frequency, rate, or extent of lymphocyte mediated immunity. down regulation of lymphocyte mediated immunity down-regulation of lymphocyte mediated immunity downregulation of lymphocyte mediated immunity inhibition of lymphocyte mediated immunity biological_process GO:0002707 negative regulation of lymphocyte mediated immunity GO:0002707 Any process that stops, prevents, or reduces the frequency, rate, or extent of lymphocyte mediated immunity. GOC:add Any process that activates or increases the frequency, rate, or extent of lymphocyte mediated immunity. up regulation of lymphocyte mediated immunity up-regulation of lymphocyte mediated immunity upregulation of lymphocyte mediated immunity activation of lymphocyte mediated immunity stimulation of lymphocyte mediated immunity biological_process GO:0002708 positive regulation of lymphocyte mediated immunity GO:0002708 Any process that activates or increases the frequency, rate, or extent of lymphocyte mediated immunity. GOC:add Any process that modulates the frequency, rate, or extent of myeloid leukocyte differentiation. biological_process GO:0002761 regulation of myeloid leukocyte differentiation GO:0002761 Any process that modulates the frequency, rate, or extent of myeloid leukocyte differentiation. GOC:add Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid leukocyte differentiation. down regulation of myeloid leukocyte differentiation down-regulation of myeloid leukocyte differentiation downregulation of myeloid leukocyte differentiation inhibition of myeloid leukocyte differentiation biological_process GO:0002762 negative regulation of myeloid leukocyte differentiation GO:0002762 Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid leukocyte differentiation. GOC:add Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte differentiation. up regulation of myeloid leukocyte differentiation up-regulation of myeloid leukocyte differentiation upregulation of myeloid leukocyte differentiation activation of myeloid leukocyte differentiation stimulation of myeloid leukocyte differentiation biological_process GO:0002763 positive regulation of myeloid leukocyte differentiation GO:0002763 Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte differentiation. GOC:add The controlled release of a peptide from a cell or a tissue. biological_process GO:0002790 peptide secretion GO:0002790 The controlled release of a peptide from a cell or a tissue. GOC:add Any process that modulates the frequency, rate, or extent of peptide secretion. biological_process GO:0002791 regulation of peptide secretion GO:0002791 Any process that modulates the frequency, rate, or extent of peptide secretion. GOC:add Any process that stops, prevents, or reduces the frequency, rate, or extent of peptide secretion. down regulation of peptide secretion down-regulation of peptide secretion downregulation of peptide secretion inhibition of peptide secretion biological_process GO:0002792 negative regulation of peptide secretion GO:0002792 Any process that stops, prevents, or reduces the frequency, rate, or extent of peptide secretion. GOC:add Any process that activates or increases the frequency, rate, or extent of peptide secretion. up regulation of peptide secretion up-regulation of peptide secretion upregulation of peptide secretion activation of peptide secretion stimulation of peptide secretion biological_process GO:0002793 positive regulation of peptide secretion GO:0002793 Any process that activates or increases the frequency, rate, or extent of peptide secretion. GOC:add Any process that modulates the frequency, rate, or extent of a response to biotic stimulus. biological_process GO:0002831 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. regulation of response to biotic stimulus GO:0002831 Any process that modulates the frequency, rate, or extent of a response to biotic stimulus. GOC:add Any process that stops, prevents, or reduces the frequency, rate, or extent of a response to biotic stimulus. down regulation of response to biotic stimulus down-regulation of response to biotic stimulus downregulation of response to biotic stimulus inhibition of response to biotic stimulus biological_process GO:0002832 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. negative regulation of response to biotic stimulus GO:0002832 Any process that stops, prevents, or reduces the frequency, rate, or extent of a response to biotic stimulus. GOC:add Any process that activates or increases the frequency, rate, or extent of a response to biotic stimulus. up regulation of response to biotic stimulus up-regulation of response to biotic stimulus upregulation of response to biotic stimulus activation of response to biotic stimulus stimulation of response to biotic stimulus biological_process GO:0002833 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. positive regulation of response to biotic stimulus GO:0002833 Any process that activates or increases the frequency, rate, or extent of a response to biotic stimulus. GOC:add Any process that modulates the frequency, rate, or extent of myeloid leukocyte mediated immunity. biological_process GO:0002886 regulation of myeloid leukocyte mediated immunity GO:0002886 Any process that modulates the frequency, rate, or extent of myeloid leukocyte mediated immunity. GOC:add Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid leukocyte mediated immunity. down regulation of myeloid leukocyte mediated immunity down-regulation of myeloid leukocyte mediated immunity downregulation of myeloid leukocyte mediated immunity inhibition of myeloid leukocyte mediated immunity biological_process GO:0002887 negative regulation of myeloid leukocyte mediated immunity GO:0002887 Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid leukocyte mediated immunity. GOC:add Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte mediated immunity. up regulation of myeloid leukocyte mediated immunity up-regulation of myeloid leukocyte mediated immunity upregulation of myeloid leukocyte mediated immunity activation of myeloid leukocyte mediated immunity stimulation of myeloid leukocyte mediated immunity biological_process GO:0002888 positive regulation of myeloid leukocyte mediated immunity GO:0002888 Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte mediated immunity. GOC:add The process whose specific outcome is the progression of a tendon sheath over time, from its formation to the mature structure. A tendon sheath is a layer of membrane around a tendon. It permits the tendon to move. hjd 2012-04-23T02:11:22Z biological_process GO:0002932 tendon sheath development GO:0002932 The process whose specific outcome is the progression of a tendon sheath over time, from its formation to the mature structure. A tendon sheath is a layer of membrane around a tendon. It permits the tendon to move. PMID:20696843 The pattern specification process that results in the subdivision of an axis or axes in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment. biological_process pattern formation GO:0003002 regionalization GO:0003002 The pattern specification process that results in the subdivision of an axis or axes in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment. GOC:dph GOC:isa_complete pattern formation GOC:dph A developmental process in which a progressive change in the state of some part of an organism, germline or somatic, specifically contributes to its ability to form offspring. puberty biological_process reproductive developmental process GO:0003006 developmental process involved in reproduction GO:0003006 A developmental process in which a progressive change in the state of some part of an organism, germline or somatic, specifically contributes to its ability to form offspring. GOC:dph GOC:isa_complete puberty GOC:dph reproductive developmental process GOC:dph GOC:tb The developmental process in which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood. biological_process cardiac morphogenesis GO:0003007 heart morphogenesis GO:0003007 The developmental process in which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood. GOC:dph GOC:isa_complete A multicellular organismal process carried out by any of the organs or tissues in an organ system. An organ system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a biological objective. organ system process biological_process GO:0003008 system process GO:0003008 A multicellular organismal process carried out by any of the organs or tissues in an organ system. An organ system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a biological objective. GOC:mtg_cardio A process in which force is generated within skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and in most cases it is under voluntary control. biological_process GO:0003009 skeletal muscle contraction GO:0003009 A process in which force is generated within skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and in most cases it is under voluntary control. GOC:mtg_cardio GOC:mtg_muscle An organ system process carried out at the level of a muscle. Muscle tissue is composed of contractile cells or fibers. biological_process muscle physiological process GO:0003012 muscle system process GO:0003012 An organ system process carried out at the level of a muscle. Muscle tissue is composed of contractile cells or fibers. GOC:mtg_cardio An organ system process carried out by any of the organs or tissues of the circulatory system. The circulatory system is an organ system that moves extracellular fluids to and from tissue within a multicellular organism. Wikipedia:Circulatory_system biological_process GO:0003013 circulatory system process GO:0003013 An organ system process carried out by any of the organs or tissues of the circulatory system. The circulatory system is an organ system that moves extracellular fluids to and from tissue within a multicellular organism. GOC:mtg_cardio A circulatory system process carried out by the heart. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood. biological_process cardiac process GO:0003015 heart process GO:0003015 A circulatory system process carried out by the heart. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood. GOC:mtg_cardio A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. GO:0010802 respiratory gaseous exchange biological_process GO:0003016 respiratory system process GO:0003016 A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. GOC:dph GOC:mtg_cardio GOC:tb The series of events in which an oxygen stimulus is received by a cell and converted into a molecular signal. biological_process GO:0003032 detection of oxygen GO:0003032 The series of events in which an oxygen stimulus is received by a cell and converted into a molecular signal. GOC:mtg_cardio Any process that mediates the transfer of information from mesodermal cells to endodermal cells. tb 2009-09-22T03:07:34Z mesodermal-endodermal cell signalling biological_process GO:0003131 mesodermal-endodermal cell signaling GO:0003131 Any process that mediates the transfer of information from mesodermal cells to endodermal cells. GOC:mtg_heart mesodermal-endodermal cell signalling GOC:mah Any process that mediates the transfer of information from endodermal cells to mesodermal cells. tb 2009-09-22T03:10:29Z endodermal-mesodermal cell signalling biological_process GO:0003133 endodermal-mesodermal cell signaling GO:0003133 Any process that mediates the transfer of information from endodermal cells to mesodermal cells. GOC:mtg_heart endodermal-mesodermal cell signalling GOC:mah The process in which the anatomical structures of the cardiogenic plate are generated and organized. The cardiogenic plate is the first recognizable structure derived from the heart field. tb 2009-09-22T04:12:18Z cardiac crescent morphogenesis biological_process GO:0003142 cardiogenic plate morphogenesis GO:0003142 The process in which the anatomical structures of the cardiogenic plate are generated and organized. The cardiogenic plate is the first recognizable structure derived from the heart field. GOC:mtg_heart cardiac crescent morphogenesis GOC:mtg_heart The process in which the anatomical structures of the embryonic heart tube are generated and organized. The embryonic heart tube is an epithelial tube that will give rise to the mature heart. tb 2009-09-22T04:21:17Z biological_process GO:0003143 embryonic heart tube morphogenesis GO:0003143 The process in which the anatomical structures of the embryonic heart tube are generated and organized. The embryonic heart tube is an epithelial tube that will give rise to the mature heart. GOC:mtg_heart The process that gives rise to the embryonic heart tube. This process pertains to the initial formation of a structure from unspecified parts. The embryonic heart tube is an epithelial tube that will give rise to the mature heart. tb 2009-09-22T04:22:34Z biological_process GO:0003144 embryonic heart tube formation GO:0003144 The process that gives rise to the embryonic heart tube. This process pertains to the initial formation of a structure from unspecified parts. The embryonic heart tube is an epithelial tube that will give rise to the mature heart. GOC:mtg_heart The process that gives rise to the embryonic heart tube by the cells of the heart field along a linear axis. tb 2009-09-22T04:26:03Z biological_process GO:0003145 embryonic heart tube formation via epithelial folding GO:0003145 The process that gives rise to the embryonic heart tube by the cells of the heart field along a linear axis. GOC:mtg_heart The characteristic movement of a cell from the dorsal ridge of the neural tube towards the heart and that contributes to heart formation. tb 2009-09-22T04:29:55Z biological_process GO:0003147 neural crest cell migration involved in heart formation GO:0003147 The characteristic movement of a cell from the dorsal ridge of the neural tube towards the heart and that contributes to heart formation. GOC:mtg_heart The process in which the anatomical structures of the outflow tract septum are generated and organized. The outflow tract septum is a partition in the outflow tract. tb 2009-09-22T07:51:01Z biological_process GO:0003148 outflow tract septum morphogenesis GO:0003148 The process in which the anatomical structures of the outflow tract septum are generated and organized. The outflow tract septum is a partition in the outflow tract. GOC:mtg_heart The process in which the membranous septum is generated and organized. The membranous septum is the upper part of ventricular septum. tb 2009-09-22T07:51:41Z biological_process GO:0003149 membranous septum morphogenesis GO:0003149 The process in which the membranous septum is generated and organized. The membranous septum is the upper part of ventricular septum. GOC:mtg_heart The process in which the muscular septum is generated and organized. The muscular septum is the lower part of the ventricular septum. tb 2009-09-22T07:53:28Z biological_process GO:0003150 muscular septum morphogenesis GO:0003150 The process in which the muscular septum is generated and organized. The muscular septum is the lower part of the ventricular septum. GOC:mtg_heart The process in which the anatomical structures of the outflow tract are generated and organized. The outflow tract is the portion of the heart through which blood flows into the arteries. tb 2009-09-22T07:59:24Z biological_process GO:0003151 outflow tract morphogenesis GO:0003151 The process in which the anatomical structures of the outflow tract are generated and organized. The outflow tract is the portion of the heart through which blood flows into the arteries. GOC:mtg_heart UBERON:0004145 The morphogenetic process in which an epithelial sheet bends along a linear axis, contributing to embryonic heart tube formation. tb 2009-09-23T10:10:24Z biological_process GO:0003152 morphogenesis of an epithelial fold involved in embryonic heart tube formation GO:0003152 The morphogenetic process in which an epithelial sheet bends along a linear axis, contributing to embryonic heart tube formation. GOC:mtg_heart Any process that modulates the rate, frequency or extent of animal organ formation. Organ formation is the process pertaining to the initial formation of an organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. tb 2009-09-30T11:21:09Z biological_process GO:0003156 regulation of animal organ formation GO:0003156 Any process that modulates the rate, frequency or extent of animal organ formation. Organ formation is the process pertaining to the initial formation of an organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. GOC:dph GOC:mtg_heart GOC:tb The process whose specific outcome is the progression of the endocardium over time, from its formation to the mature structure. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers. dph 2009-10-01T12:42:27Z biological_process GO:0003157 endocardium development GO:0003157 The process whose specific outcome is the progression of the endocardium over time, from its formation to the mature structure. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers. GOC:mtg_heart The process whose specific outcome is the progression of an endothelium over time, from its formation to the mature structure. Endothelium refers to the layer of cells lining blood vessels, lymphatics, the heart, and serous cavities, and is derived from bone marrow or mesoderm. Corneal endothelium is a special case, derived from neural crest cells. dph 2009-10-01T12:50:57Z biological_process GO:0003158 endothelium development GO:0003158 The process whose specific outcome is the progression of an endothelium over time, from its formation to the mature structure. Endothelium refers to the layer of cells lining blood vessels, lymphatics, the heart, and serous cavities, and is derived from bone marrow or mesoderm. Corneal endothelium is a special case, derived from neural crest cells. GOC:mtg_heart The process in which the anatomical structure of an endothelium is generated and organized. Endothelium refers to the layer of cells lining blood vessels, lymphatics, the heart, and serous cavities, and is derived from bone marrow or mesoderm. Corneal endothelium is a special case, derived from neural crest cells. dph 2009-10-01T01:34:06Z biological_process GO:0003159 morphogenesis of an endothelium GO:0003159 The process in which the anatomical structure of an endothelium is generated and organized. Endothelium refers to the layer of cells lining blood vessels, lymphatics, the heart, and serous cavities, and is derived from bone marrow or mesoderm. Corneal endothelium is a special case, derived from neural crest cells. GOC:mtg_heart The process in which the anatomical structure of the endocardium is generated and organized. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers. dph 2009-10-01T01:37:26Z biological_process GO:0003160 endocardium morphogenesis GO:0003160 The process in which the anatomical structure of the endocardium is generated and organized. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers. GOC:mtg_heart The process whose specific outcome is the progression of the cardiac conduction system over time, from its formation to the mature structure. The cardiac conduction system consists of specialized cardiomyocytes that regulate the frequency of heart beat. dph 2009-10-01T01:57:16Z cardiac impulse conducting system development heart conduction system development biological_process GO:0003161 cardiac conduction system development GO:0003161 The process whose specific outcome is the progression of the cardiac conduction system over time, from its formation to the mature structure. The cardiac conduction system consists of specialized cardiomyocytes that regulate the frequency of heart beat. GOC:mtg_heart cardiac impulse conducting system development GOC:mtg_heart heart conduction system development GOC:mtg_heart The process whose specific outcome is the progression of the atrioventricular (AV) node over time, from its formation to the mature structure. The AV node is part of the cardiac conduction system that controls the timing of ventricle contraction by receiving electrical signals from the sinoatrial (SA) node and relaying them to the His-Purkinje system. dph 2009-10-01T02:05:13Z AV node development biological_process GO:0003162 atrioventricular node development GO:0003162 The process whose specific outcome is the progression of the atrioventricular (AV) node over time, from its formation to the mature structure. The AV node is part of the cardiac conduction system that controls the timing of ventricle contraction by receiving electrical signals from the sinoatrial (SA) node and relaying them to the His-Purkinje system. GOC:mtg_heart AV node development GOC:mtg_heart The process whose specific outcome is the progression of the sinoatrial (SA) node over time, from its formation to the mature structure. The SA node is part of the cardiac conduction system that controls the timing of heart muscle contraction. It relays electrical signals to the AV node. dph 2009-10-01T02:06:09Z SA node development SAN development sinus node development biological_process GO:0003163 sinoatrial node development GO:0003163 The process whose specific outcome is the progression of the sinoatrial (SA) node over time, from its formation to the mature structure. The SA node is part of the cardiac conduction system that controls the timing of heart muscle contraction. It relays electrical signals to the AV node. GOC:mtg_heart SA node development GOC:mtg_heart SAN development GOC:BHF GOC:mtg_cardiac_conduct_nov11 sinus node development GOC:BHF GOC:mtg_cardiac_conduct_nov11 The process whose specific outcome is the progression of the His-Purkinje system over time, from its formation to the mature structure. The His-Purkinje system receives signals from the AV node and is composed of the fibers that regulate cardiac muscle contraction in the ventricles. dph 2009-10-01T02:07:12Z biological_process GO:0003164 His-Purkinje system development GO:0003164 The process whose specific outcome is the progression of the His-Purkinje system over time, from its formation to the mature structure. The His-Purkinje system receives signals from the AV node and is composed of the fibers that regulate cardiac muscle contraction in the ventricles. GOC:mtg_heart The process whose specific outcome is the progression of a Purkinje myocyte over time, from its formation to the mature structure. The Purkinje myocyte (also known as cardiac Purkinje fiber) is part of the cardiac conduction system that receives signals from the bundle of His and innervates the ventricular cardiac muscle. dph 2009-10-01T02:07:50Z cardiac Purkinje fiber development biological_process GO:0003165 Purkinje myocyte development GO:0003165 The process whose specific outcome is the progression of a Purkinje myocyte over time, from its formation to the mature structure. The Purkinje myocyte (also known as cardiac Purkinje fiber) is part of the cardiac conduction system that receives signals from the bundle of His and innervates the ventricular cardiac muscle. GOC:mtg_cardiac_conduct_nov11 GOC:mtg_heart The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a Purkinje myocyte (also known as cardiac Purkinje fiber cell). These cells are specialized cardiomyocytes that receive signals from the bundle of His and innervate the ventricular cardiac muscle. dph 2009-10-01T02:49:54Z cardiac Purkinje fiber cell differentiation biological_process GO:0003168 Purkinje myocyte differentiation GO:0003168 The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a Purkinje myocyte (also known as cardiac Purkinje fiber cell). These cells are specialized cardiomyocytes that receive signals from the bundle of His and innervate the ventricular cardiac muscle. GOC:mtg_cardiac_conduct_nov11 GOC:mtg_heart The process in which the anatomical structures of veins of the heart are generated and organized. dph 2009-10-08T10:45:41Z biological_process GO:0003169 coronary vein morphogenesis GO:0003169 The process in which the anatomical structures of veins of the heart are generated and organized. GOC:mtg_heart The progression of a cardiac cushion over time, from its initial formation to the mature structure. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves. dph 2009-10-08T01:17:43Z biological_process GO:0003197 endocardial cushion development GO:0003197 The progression of a cardiac cushion over time, from its initial formation to the mature structure. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves. GOC:mtg_heart The process in which the anatomical structure of the endocardial cushion is generated and organized. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves. dph 2009-10-08T01:43:22Z biological_process GO:0003203 endocardial cushion morphogenesis GO:0003203 The process in which the anatomical structure of the endocardial cushion is generated and organized. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves. GOC:mtg_heart The progression of the cardiac skeleton over time, from its formation to the mature structure. The cardiac skeleton is a specialized extracellular matrix that separates the atria from the ventricles and provides physical support for the heart. dph 2009-10-13T09:05:04Z heart fibrous skeleton development biological_process GO:0003204 cardiac skeleton development GO:0003204 The progression of the cardiac skeleton over time, from its formation to the mature structure. The cardiac skeleton is a specialized extracellular matrix that separates the atria from the ventricles and provides physical support for the heart. GOC:mtg_heart heart fibrous skeleton development GOC:mtg_heart The progression of a cardiac chamber over time, from its formation to the mature structure. A cardiac chamber is an enclosed cavity within the heart. dph 2009-10-13T09:11:18Z biological_process GO:0003205 cardiac chamber development GO:0003205 The progression of a cardiac chamber over time, from its formation to the mature structure. A cardiac chamber is an enclosed cavity within the heart. GOC:mtg_heart The process in which a cardiac chamber is generated and organized. A cardiac chamber is an enclosed cavity within the heart. dph 2009-10-13T09:14:51Z heart chamber morphogenesis biological_process GO:0003206 cardiac chamber morphogenesis GO:0003206 The process in which a cardiac chamber is generated and organized. A cardiac chamber is an enclosed cavity within the heart. GOC:mtg_heart heart chamber morphogenesis GOC:mtg_heart The developmental process pertaining to the initial formation of a cardiac chamber from unspecified parts. A cardiac chamber is an enclosed cavity within the heart. dph 2009-10-13T09:29:13Z heart chamber formation biological_process GO:0003207 cardiac chamber formation GO:0003207 The developmental process pertaining to the initial formation of a cardiac chamber from unspecified parts. A cardiac chamber is an enclosed cavity within the heart. GOC:mtg_heart heart chamber formation GOC:mtg_heart The process in which the cardiac ventricle is generated and organized. A cardiac ventricle receives blood from a cardiac atrium and pumps it out of the heart. dph 2009-10-13T09:38:44Z biological_process GO:0003208 cardiac ventricle morphogenesis GO:0003208 The process in which the cardiac ventricle is generated and organized. A cardiac ventricle receives blood from a cardiac atrium and pumps it out of the heart. GOC:mtg_heart The process in which the cardiac atrium is generated and organized. A cardiac atrium receives blood from a vein and pumps it to a cardiac ventricle. dph 2009-10-13T09:39:44Z biological_process GO:0003209 cardiac atrium morphogenesis GO:0003209 The process in which the cardiac atrium is generated and organized. A cardiac atrium receives blood from a vein and pumps it to a cardiac ventricle. GOC:mtg_heart The developmental process pertaining to the initial formation of a cardiac atrium from unspecified parts. A cardiac atrium receives blood from a vein and pumps it to a cardiac ventricle. dph 2009-10-13T09:44:25Z biological_process GO:0003210 cardiac atrium formation GO:0003210 The developmental process pertaining to the initial formation of a cardiac atrium from unspecified parts. A cardiac atrium receives blood from a vein and pumps it to a cardiac ventricle. GOC:mtg_heart The developmental process pertaining to the initial formation of a cardiac ventricle from unspecified parts. A cardiac ventricle receives blood from a cardiac atrium and pumps it out of the heart. dph 2009-10-13T09:46:27Z biological_process GO:0003211 cardiac ventricle formation GO:0003211 The developmental process pertaining to the initial formation of a cardiac ventricle from unspecified parts. A cardiac ventricle receives blood from a cardiac atrium and pumps it out of the heart. GOC:mtg_heart The process in which the left cardiac atrium is generated and organized. dph 2009-10-13T09:48:16Z biological_process GO:0003212 cardiac left atrium morphogenesis GO:0003212 The process in which the left cardiac atrium is generated and organized. GOC:mtg_heart The process in which the right cardiac atrium is generated and organized. dph 2009-10-13T09:49:03Z biological_process GO:0003213 cardiac right atrium morphogenesis GO:0003213 The process in which the right cardiac atrium is generated and organized. GOC:mtg_heart The process in which the left cardiac ventricle is generated and organized. dph 2009-10-13T09:50:08Z biological_process GO:0003214 cardiac left ventricle morphogenesis GO:0003214 The process in which the left cardiac ventricle is generated and organized. GOC:mtg_heart The process in which the right cardiac ventricle is generated and organized. dph 2009-10-13T09:50:57Z biological_process GO:0003215 cardiac right ventricle morphogenesis GO:0003215 The process in which the right cardiac ventricle is generated and organized. GOC:mtg_heart The developmental process pertaining to the initial formation of a left cardiac atrium from unspecified parts. dph 2009-10-13T09:52:31Z biological_process GO:0003216 cardiac left atrium formation GO:0003216 The developmental process pertaining to the initial formation of a left cardiac atrium from unspecified parts. GOC:mtg_heart The developmental process pertaining to the initial formation of a cardiac right atrium from unspecified parts. dph 2009-10-13T09:53:12Z biological_process GO:0003217 cardiac right atrium formation GO:0003217 The developmental process pertaining to the initial formation of a cardiac right atrium from unspecified parts. GOC:mtg_heart The developmental process pertaining to the initial formation of a left cardiac ventricle from unspecified parts. dph 2009-10-13T09:54:33Z biological_process GO:0003218 cardiac left ventricle formation GO:0003218 The developmental process pertaining to the initial formation of a left cardiac ventricle from unspecified parts. GOC:mtg_heart The developmental process pertaining to the initial formation of a right cardiac ventricle from unspecified parts. dph 2009-10-13T09:55:38Z biological_process GO:0003219 cardiac right ventricle formation GO:0003219 The developmental process pertaining to the initial formation of a right cardiac ventricle from unspecified parts. GOC:mtg_heart The process in which the anatomical structures of left cardiac ventricle muscle are generated and organized. dph 2009-10-13T10:18:05Z left ventricular myocardium morphogenesis biological_process GO:0003220 left ventricular cardiac muscle tissue morphogenesis GO:0003220 The process in which the anatomical structures of left cardiac ventricle muscle are generated and organized. GOC:mtg_heart left ventricular myocardium morphogenesis GOC:mtg_heart The process in which the anatomical structures of the right cardiac ventricle muscle are generated and organized. dph 2009-10-13T10:26:33Z right ventricle myocardium morphogenesis biological_process GO:0003221 right ventricular cardiac muscle tissue morphogenesis GO:0003221 The process in which the anatomical structures of the right cardiac ventricle muscle are generated and organized. GOC:mtg_heart right ventricle myocardium morphogenesis GOC:mtg_heart The process whose specific outcome is the progression of cardiac muscle of the atrium over time, from its formation to the mature structure. dph 2009-10-13T10:53:18Z atrial myocardium development biological_process GO:0003228 atrial cardiac muscle tissue development GO:0003228 The process whose specific outcome is the progression of cardiac muscle of the atrium over time, from its formation to the mature structure. GOC:mtg_heart atrial myocardium development GOC:mtg_heart The process whose specific outcome is the progression of ventricular cardiac muscle over time, from its formation to the mature structure. dph 2009-10-13T10:56:01Z ventricular myocardium development biological_process GO:0003229 ventricular cardiac muscle tissue development GO:0003229 The process whose specific outcome is the progression of ventricular cardiac muscle over time, from its formation to the mature structure. GOC:mtg_heart ventricular myocardium development GOC:mtg_heart The process whose specific outcome is the progression of a cardiac atrium over time, from its formation to the mature structure. A cardiac atrium receives blood from a vein and pumps it to a cardiac ventricle. dph 2009-10-13T11:02:07Z biological_process GO:0003230 cardiac atrium development GO:0003230 The process whose specific outcome is the progression of a cardiac atrium over time, from its formation to the mature structure. A cardiac atrium receives blood from a vein and pumps it to a cardiac ventricle. GOC:mtg_heart The process whose specific outcome is the progression of a cardiac ventricle over time, from its formation to the mature structure. A cardiac ventricle receives blood from a cardiac atrium and pumps it out of the heart. dph 2009-10-13T11:03:16Z biological_process GO:0003231 cardiac ventricle development GO:0003231 The process whose specific outcome is the progression of a cardiac ventricle over time, from its formation to the mature structure. A cardiac ventricle receives blood from a cardiac atrium and pumps it out of the heart. GOC:mtg_heart The progression of the sinus venosus over time, from its formation to the mature structure. The sinus venosus is a heart chamber attached to the atrium on the venous side of the embryonic heart. dph 2009-10-13T11:12:34Z biological_process GO:0003235 sinus venosus development GO:0003235 The progression of the sinus venosus over time, from its formation to the mature structure. The sinus venosus is a heart chamber attached to the atrium on the venous side of the embryonic heart. GOC:mtg_heart The process in which the sinus venosus is generated and organized. The sinus venosus is a heart chamber attached to the atrium on the venous side of the embryonic heart. dph 2009-10-13T11:16:52Z biological_process GO:0003236 sinus venosus morphogenesis GO:0003236 The process in which the sinus venosus is generated and organized. The sinus venosus is a heart chamber attached to the atrium on the venous side of the embryonic heart. GOC:mtg_heart The developmental process pertaining to the initial formation of the sinus venosus from unspecified parts. The sinus venosus is a heart chamber attached to the atrium on the venous side of the embryonic heart. dph 2009-10-13T11:18:34Z biological_process GO:0003237 sinus venosus formation GO:0003237 The developmental process pertaining to the initial formation of the sinus venosus from unspecified parts. The sinus venosus is a heart chamber attached to the atrium on the venous side of the embryonic heart. GOC:mtg_heart Developmental growth that contributes to the shaping of the heart. dph 2009-10-13T11:28:46Z biological_process GO:0003241 growth involved in heart morphogenesis GO:0003241 Developmental growth that contributes to the shaping of the heart. GOC:mtg_heart The developmental growth of cardiac muscle tissue that contributes to the shaping of the heart. dph 2009-10-13T11:44:21Z biological_process GO:0003245 cardiac muscle tissue growth involved in heart morphogenesis GO:0003245 The developmental growth of cardiac muscle tissue that contributes to the shaping of the heart. GOC:mtg_heart The increase in heart capillaries that accompanies physiological hypertrophy of cardiac muscle. dph 2009-10-13T11:53:12Z biological_process GO:0003248 heart capillary growth GO:0003248 The increase in heart capillaries that accompanies physiological hypertrophy of cardiac muscle. GOC:mtg_heart The orderly movement of a neural crest cell from one site to another that will contribute to the morphogenesis of the outflow tract. dph 2009-10-13T02:14:16Z biological_process GO:0003253 cardiac neural crest cell migration involved in outflow tract morphogenesis GO:0003253 The orderly movement of a neural crest cell from one site to another that will contribute to the morphogenesis of the outflow tract. GOC:mtg_heart The orderly movement of a cardiac progenitor cell to form the heart field. Cardiac progenitor cells are non-terminally differentiated, mesoderm-derived cells that are committed to differentiate into cells of the heart. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. dph 2009-10-15T01:52:25Z biological_process GO:0003260 cardioblast migration GO:0003260 The orderly movement of a cardiac progenitor cell to form the heart field. Cardiac progenitor cells are non-terminally differentiated, mesoderm-derived cells that are committed to differentiate into cells of the heart. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. GOC:mtg_heart The developmental process pertaining to the initial formation of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves. dph 2009-10-20T08:53:19Z biological_process GO:0003272 endocardial cushion formation GO:0003272 The developmental process pertaining to the initial formation of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves. GOC:mtg_heart PMID:15797462 The orderly movement of a cell from one site to another that will contribute to the formation of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves. dph 2009-10-20T09:08:44Z biological_process GO:0003273 cell migration involved in endocardial cushion formation GO:0003273 The orderly movement of a cell from one site to another that will contribute to the formation of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves. GOC:mtg_heart Any apoptotic process that contributes to the shaping of the outflow tract. The outflow tract is the portion of the heart through which blood flows into the arteries. dph 2009-10-20T09:30:01Z apoptosis involved in outflow tract morphogenesis biological_process GO:0003275 apoptotic process involved in outflow tract morphogenesis GO:0003275 Any apoptotic process that contributes to the shaping of the outflow tract. The outflow tract is the portion of the heart through which blood flows into the arteries. GOC:mtg_apoptosis GOC:mtg_heart Any apoptotic process that contributes to the shaping of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves. dph 2009-10-20T09:37:03Z apoptosis involved in endocardial cushion morphogenesis biological_process GO:0003277 apoptotic process involved in endocardial cushion morphogenesis GO:0003277 Any apoptotic process that contributes to the shaping of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves. GOC:mtg_apoptosis GOC:mtg_heart Any apoptotic process that contributes to the shaping of the heart. dph 2009-10-20T09:40:22Z apoptosis involved in heart morphogenesis biological_process GO:0003278 apoptotic process involved in heart morphogenesis GO:0003278 Any apoptotic process that contributes to the shaping of the heart. GOC:mtg_apoptosis GOC:mtg_heart The progression of a cardiac septum over time, from its initial formation to the mature structure. dph 2009-10-20T09:45:13Z heart septum development biological_process GO:0003279 cardiac septum development GO:0003279 The progression of a cardiac septum over time, from its initial formation to the mature structure. GOC:mtg_heart heart septum development GOC:mtg_heart The progression of the ventricular septum over time from its formation to the mature structure. dph 2009-10-20T10:04:51Z interventricular septum development septum inferius development biological_process GO:0003281 ventricular septum development GO:0003281 The progression of the ventricular septum over time from its formation to the mature structure. GOC:mtg_heart interventricular septum development GOC:mtg_heart septum inferius development GOC:mtg_heart The progression of the atrial septum over time, from its initial formation to the mature structure. dph 2009-10-20T10:10:38Z biological_process GO:0003283 atrial septum development GO:0003283 The progression of the atrial septum over time, from its initial formation to the mature structure. GOC:mtg_heart The process in which an endocardial cushion cell becomes a cell of a cardiac septum. dph 2009-10-20T11:03:46Z biological_process GO:0003292 cardiac septum cell differentiation GO:0003292 The process in which an endocardial cushion cell becomes a cell of a cardiac septum. GOC:mtg_heart The enlargement or overgrowth of all or part of a muscle organ or tissue due to an increase in the size of its muscle cells. Physiological hypertrophy is a normal process during development. dph 2009-10-22T09:24:51Z biological_process GO:0003298 physiological muscle hypertrophy GO:0003298 The enlargement or overgrowth of all or part of a muscle organ or tissue due to an increase in the size of its muscle cells. Physiological hypertrophy is a normal process during development. GOC:mtg_heart The enlargement or overgrowth of all or part of the heart muscle due to an increase in size of cardiac muscle cells without cell division. dph 2009-10-22T10:33:56Z biological_process GO:0003300 cardiac muscle hypertrophy GO:0003300 The enlargement or overgrowth of all or part of the heart muscle due to an increase in size of cardiac muscle cells without cell division. GOC:mtg_heart The enlargement or overgrowth of all or part of the heart muscle due to an increase in size of cardiac muscle cells without cell division. This process contributes to the developmental growth of the heart. dph 2009-10-22T10:38:10Z biological_process GO:0003301 physiological cardiac muscle hypertrophy GO:0003301 The enlargement or overgrowth of all or part of the heart muscle due to an increase in size of cardiac muscle cells without cell division. This process contributes to the developmental growth of the heart. GOC:BHF GOC:mtg_cardiac_conduct_nov11 GOC:mtg_heart The progression of the heart rudiment over time, from its initial formation to the mature structure. The heart rudiment is a cone-like structure that is formed when myocardial progenitor cells of the heart field fuse at the midline. The heart rudiment is the first structure of the heart tube. dph 2009-10-27T08:32:40Z heart cone development biological_process GO:0003313 heart rudiment development GO:0003313 The progression of the heart rudiment over time, from its initial formation to the mature structure. The heart rudiment is a cone-like structure that is formed when myocardial progenitor cells of the heart field fuse at the midline. The heart rudiment is the first structure of the heart tube. GOC:mtg_heart heart cone development GOC:mtg_heart The process in which the anatomical structures of the heart rudiment are generated and organized. dph 2009-10-27T08:38:04Z heart cone morphogenesis biological_process GO:0003314 heart rudiment morphogenesis GO:0003314 The process in which the anatomical structures of the heart rudiment are generated and organized. GOC:mtg_heart heart cone morphogenesis GOC:mtg_heart The developmental process pertaining to the initial formation of the heart rudiment. dph 2009-10-27T08:43:37Z heart cone formation biological_process GO:0003315 heart rudiment formation GO:0003315 The developmental process pertaining to the initial formation of the heart rudiment. GOC:mtg_heart heart cone formation GOC:mtg_heart Any process that modulates the rate, frequency, or extent of the controlled release of molecules that form the extracellular matrix, including carbohydrates and glycoproteins by a cell or a group of cells. dph 2009-11-02T02:07:40Z biological_process GO:0003330 regulation of extracellular matrix constituent secretion GO:0003330 Any process that modulates the rate, frequency, or extent of the controlled release of molecules that form the extracellular matrix, including carbohydrates and glycoproteins by a cell or a group of cells. GOC:dph GOC:tb Any process that increases the rate, frequency, or extent of the controlled release of molecules that form the extracellular matrix, including carbohydrates and glycoproteins by a cell or a group of cells. dph 2009-11-02T02:11:22Z biological_process GO:0003331 positive regulation of extracellular matrix constituent secretion GO:0003331 Any process that increases the rate, frequency, or extent of the controlled release of molecules that form the extracellular matrix, including carbohydrates and glycoproteins by a cell or a group of cells. GOC:dph GOC:tb Any process that decreases the rate, frequency, or extent the controlled release of molecules that form the extracellular matrix, including carbohydrates and glycoproteins by a cell or a group of cells. dph 2009-11-02T02:13:49Z biological_process GO:0003332 negative regulation of extracellular matrix constituent secretion GO:0003332 Any process that decreases the rate, frequency, or extent the controlled release of molecules that form the extracellular matrix, including carbohydrates and glycoproteins by a cell or a group of cells. GOC:dph GOC:tb The process in which an amino acid is transported across a membrane. dph 2009-11-02T02:36:11Z amino acid membrane transport biological_process GO:0003333 Note that this term is not intended for use in annotating lateral movement within membranes. amino acid transmembrane transport GO:0003333 The process in which an amino acid is transported across a membrane. GOC:dph GOC:tb The directed, self-propelled movement of a cilium. dph 2009-11-24T09:56:26Z GO:0036142 microtubule-based flagellum movement flagellar movement flagellum movement biological_process ciliary motility cilium beating flagellar motility GO:0003341 Note that we deem cilium and microtubule-based flagellum to be equivalent. cilium movement GO:0003341 The directed, self-propelled movement of a cilium. GOC:dph GOC:jl flagellar movement GOC:bf cilium beating GOC:ascb_2009 GOC:dph GOC:tb The progression of the proepicardium from its formation to the mature structure. The proepicardium is an outpouching of the septum transversum. dph 2009-12-01T10:30:17Z biological_process GO:0003342 proepicardium development GO:0003342 The progression of the proepicardium from its formation to the mature structure. The proepicardium is an outpouching of the septum transversum. GOC:dph PMID:18722343 The progression of the septum transversum from its initial formation to the mature structure. The septum transversum is a portion of the trunk mesenchyme. dph 2009-12-01T10:40:17Z biological_process GO:0003343 septum transversum development GO:0003343 The progression of the septum transversum from its initial formation to the mature structure. The septum transversum is a portion of the trunk mesenchyme. GOC:dph PMID:18722343 The process in which the anatomical structure of the pericardium is generated and organized. dph 2009-12-01T10:46:34Z biological_process GO:0003344 pericardium morphogenesis GO:0003344 The process in which the anatomical structure of the pericardium is generated and organized. GOC:dph PMID:18722343 The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cardiac endothelial cell. dph 2009-12-01T11:12:05Z biological_process GO:0003348 cardiac endothelial cell differentiation GO:0003348 The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cardiac endothelial cell. GOC:dph PMID:18722343 Any process that modulates the rate, frequency, or extent of cilium movement, the directed, self-propelled movement of a cilium. dph 2009-12-03T10:12:00Z GO:1900172 regulation of microtubule-based flagellum movement biological_process regulation of flagellar movement regulation of flagellum movement GO:0003352 Note that we deem cilium and microtubule-based flagellum to be equivalent. regulation of cilium movement GO:0003352 Any process that modulates the rate, frequency, or extent of cilium movement, the directed, self-propelled movement of a cilium. GOC:dph regulation of flagellar movement GOC:TermGenie Any process that increases the rate, frequency, or extent of cilium movement, the directed, self-propelled movement of a cilium. dph 2009-12-03T10:16:10Z GO:1900174 positive regulation of microtubule-based flagellum movement biological_process positive regulation of flagellar movement positive regulation of flagellum movement GO:0003353 Note that we deem cilium and microtubule-based flagellum to be equivalent. positive regulation of cilium movement GO:0003353 Any process that increases the rate, frequency, or extent of cilium movement, the directed, self-propelled movement of a cilium. GOC:dph positive regulation of flagellar movement GOC:TermGenie Any process that decreases the rate, frequency, or extent of cilium movement, the directed, self-propelled movement of a cilium. dph 2009-12-03T10:17:47Z GO:1900173 negative regulation of microtubule-based flagellum movement biological_process negative regulation of flagellum movement GO:0003354 Note that we deem cilium and microtubule-based flagellum to be equivalent. negative regulation of cilium movement GO:0003354 Any process that decreases the rate, frequency, or extent of cilium movement, the directed, self-propelled movement of a cilium. GOC:dph The process in which a relatively unspecialized cell acquires specialized features of an noradrenergic neuron, a neuron that secretes noradrenaline. dph 2009-12-03T10:34:30Z norepinephrine secreting neuron differentiation biological_process GO:0003357 noradrenergic neuron differentiation GO:0003357 The process in which a relatively unspecialized cell acquires specialized features of an noradrenergic neuron, a neuron that secretes noradrenaline. GOC:dph norepinephrine secreting neuron differentiation GOC:dph The process whose specific outcome is the progression of a noradrenergic neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. dph 2009-12-03T10:38:37Z norepinephrine secreting neuron development biological_process GO:0003358 noradrenergic neuron development GO:0003358 The process whose specific outcome is the progression of a noradrenergic neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. GOC:dph norepinephrine secreting neuron development GOC:dph The progression of the brainstem from its formation to the mature structure. The brainstem is the part of the brain that connects the brain with the spinal cord. dph 2009-12-03T10:47:20Z biological_process GO:0003360 brainstem development GO:0003360 The progression of the brainstem from its formation to the mature structure. The brainstem is the part of the brain that connects the brain with the spinal cord. GOC:dph The process in which a relatively unspecialized cell acquires specialized features of an noradrenergic neuron that is part of the brainstem. dph 2009-12-03T10:53:30Z biological_process GO:0003361 noradrenergic neuron differentiation involved in brainstem development GO:0003361 The process in which a relatively unspecialized cell acquires specialized features of an noradrenergic neuron that is part of the brainstem. GOC:dph The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of an ameboid cell. dph 2009-12-08T04:50:41Z biological_process GO:0003365 establishment of cell polarity involved in ameboidal cell migration GO:0003365 The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of an ameboid cell. GOC:ascb_2009 GOC:dph GOC:tb Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating ameboid cell. dph 2009-12-08T05:42:46Z biological_process GO:0003371 establishment or maintenance of cytoskeleton polarity involved in ameboidal cell migration GO:0003371 Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating ameboid cell. GOC:ascb_2009 GOC:dph GOC:tb The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of an ameboid cell taking part in gastrulation. dph 2009-12-09T06:54:44Z biological_process GO:0003379 establishment of cell polarity involved in gastrulation cell migration GO:0003379 The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of an ameboid cell taking part in gastrulation. GOC:ascb_2009 GOC:dph GOC:tb Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating ameboid cell taking part in gastrulation. dph 2009-12-09T07:10:57Z biological_process GO:0003380 establishment or maintenance of cytoskeleton polarity involved in gastrulation GO:0003380 Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating ameboid cell taking part in gastrulation. GOC:ascb_2009 GOC:dph GOC:tb The change in form that occurs when an epithelial cell progresses from it initial formation to its mature state, contributing to the process of gastrulation. dph 2009-12-09T07:18:53Z biological_process GO:0003381 epithelial cell morphogenesis involved in gastrulation GO:0003381 The change in form that occurs when an epithelial cell progresses from it initial formation to its mature state, contributing to the process of gastrulation. GOC:ascb_2009 GOC:dph GOC:tb The change in form that occurs when an epithelial cell progresses from its initial formation to its mature state. dph 2009-12-09T07:21:06Z biological_process GO:0003382 epithelial cell morphogenesis GO:0003382 The change in form that occurs when an epithelial cell progresses from its initial formation to its mature state. GOC:ascb_2009 GOC:dph GOC:tb The developmental process pertaining to the initial formation of the optic vesicle from the lateral wall of the forebrain. This process begins with the specific processes that contribute to the appearance of the vesicle and ends when the vesicle has evaginated. The optic vesicle is the evagination of neurectoderm that precedes formation of the optic cup. dph 2009-12-21T01:42:37Z biological_process GO:0003403 optic vesicle formation GO:0003403 The developmental process pertaining to the initial formation of the optic vesicle from the lateral wall of the forebrain. This process begins with the specific processes that contribute to the appearance of the vesicle and ends when the vesicle has evaginated. The optic vesicle is the evagination of neurectoderm that precedes formation of the optic cup. GOC:ascb_2009 GOC:dph GOC:tb The developmental process pertaining to the formation and shaping of the optic vesicle. This process begins with the specific processes that contribute to the appearance of the vesicle and ends when the vesicle has evaginated. The optic vesicle is the evagination of neurectoderm that precedes formation of the optic cup. dph 2009-12-21T01:54:34Z biological_process GO:0003404 optic vesicle morphogenesis GO:0003404 The developmental process pertaining to the formation and shaping of the optic vesicle. This process begins with the specific processes that contribute to the appearance of the vesicle and ends when the vesicle has evaginated. The optic vesicle is the evagination of neurectoderm that precedes formation of the optic cup. GOC:ascb_2009 GOC:dph GOC:tb The progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells. dph 2009-12-21T02:15:14Z biological_process GO:0003407 neural retina development GO:0003407 The progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells. GOC:ascb_2009 GOC:dph GOC:tb Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another and contributes to the physical shaping or formation of the camera-type eye. dph 2009-12-21T03:04:27Z biological_process GO:0003411 cell motility involved in camera-type eye morphogenesis GO:0003411 Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another and contributes to the physical shaping or formation of the camera-type eye. GOC:ascb_2009 GOC:dph GOC:tb The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the development of a bone. A chondrocyte is a polymorphic cell that forms cartilage. dph 2009-12-22T08:39:58Z biological_process GO:0003413 chondrocyte differentiation involved in endochondral bone morphogenesis GO:0003413 The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the development of a bone. A chondrocyte is a polymorphic cell that forms cartilage. GOC:ascb_2009 GOC:dph GOC:tb The process in which the structures of a chondrocyte that will contribute to bone development are generated and organized. dph 2009-12-22T08:42:55Z biological_process GO:0003414 chondrocyte morphogenesis involved in endochondral bone morphogenesis GO:0003414 The process in which the structures of a chondrocyte that will contribute to bone development are generated and organized. GOC:ascb_2009 GOC:dph GOC:tb The increase in size or mass of an endochondral bone that contributes to the shaping of the bone. dph 2009-12-22T08:52:55Z biological_process GO:0003416 endochondral bone growth GO:0003416 The increase in size or mass of an endochondral bone that contributes to the shaping of the bone. GOC:ascb_2009 GOC:dph GOC:tb The progression of a chondrocyte over time from after its commitment to its mature state where the chondrocyte will contribute to the shaping of an endochondral bone. dph 2009-12-22T12:42:44Z biological_process GO:0003433 chondrocyte development involved in endochondral bone morphogenesis GO:0003433 The progression of a chondrocyte over time from after its commitment to its mature state where the chondrocyte will contribute to the shaping of an endochondral bone. GOC:ascb_2009 GOC:dph GOC:tb A location, relative to cellular compartments and structures, occupied by a macromolecular machine. There are three types of cellular components described in the gene ontology: (1) the cellular anatomical entity where a gene product carries out a molecular function (e.g., plasma membrane, cytoskeleton) or membrane-enclosed compartments (e.g., mitochondrion); (2) virion components, where viral proteins act, and (3) the stable macromolecular complexes of which gene product are parts (e.g., the clathrin complex). GO:0008372 NIF_Subcellular:sao1337158144 cell or subcellular entity cellular component cellular_component subcellular entity GO:0005575 Note that, in addition to forming the root of the cellular component ontology, this term is recommended for the annotation of gene products whose cellular component is unknown. When this term is used for annotation, it indicates that no information was available about the cellular component of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this. cellular_component GO:0005575 A location, relative to cellular compartments and structures, occupied by a macromolecular machine. There are three types of cellular components described in the gene ontology: (1) the cellular anatomical entity where a gene product carries out a molecular function (e.g., plasma membrane, cytoskeleton) or membrane-enclosed compartments (e.g., mitochondrion); (2) virion components, where viral proteins act, and (3) the stable macromolecular complexes of which gene product are parts (e.g., the clathrin complex). GOC:pdt subcellular entity NIF_Subcellular:nlx_subcell_100315 The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. Wikipedia:Extracellular extracellular cellular_component GO:0005576 Note that this term is intended to annotate gene products that are not attached to the cell surface. For gene products from multicellular organisms which are secreted from a cell but retained within the organism (i.e. released into the interstitial fluid or blood), consider the cellular component term 'extracellular space ; GO:0005615'. extracellular region GO:0005576 The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. GOC:go_curators A highly soluble, elongated protein complex found in blood plasma and involved in clot formation. It is converted into fibrin monomer by the action of thrombin. In the mouse, fibrinogen is a hexamer, 46 nm long and 9 nm maximal diameter, containing two sets of nonidentical chains (alpha, beta, and gamma) linked together by disulfide bonds. fibrinogen fibrinogen alpha chain fibrinogen beta chain fibrinogen gamma chain cellular_component GO:0005577 fibrinogen complex GO:0005577 A highly soluble, elongated protein complex found in blood plasma and involved in clot formation. It is converted into fibrin monomer by the action of thrombin. In the mouse, fibrinogen is a hexamer, 46 nm long and 9 nm maximal diameter, containing two sets of nonidentical chains (alpha, beta, and gamma) linked together by disulfide bonds. ISBN:0198547684 A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures. Wikipedia:Collagen cellular_component GO:0005581 collagen trimer GO:0005581 A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures. GOC:dos GOC:mah ISBN:0721639976 PMID:19693541 PMID:21421911 Any triple helical collagen trimer that forms fibrils. cellular_component GO:0005583 fibrillar collagen trimer GO:0005583 Any triple helical collagen trimer that forms fibrils. GOC:mah ISBN:0721639976 PMID:21421911 A collagen homotrimer of alpha1(II) chains; type II collagen triple helices associate to form fibrils. Wikipedia:Collagen_type_II cellular_component GO:0005585 collagen type II trimer GO:0005585 A collagen homotrimer of alpha1(II) chains; type II collagen triple helices associate to form fibrils. ISBN:0721639976 A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form 3 dimensional nets within basement membranes. Wikipedia:Collagen_type_IV cellular_component GO:0005587 collagen type IV trimer GO:0005587 A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form 3 dimensional nets within basement membranes. PMID:19693541 PMID:21421911 A collagen-containing extracellular matrix consisting of a thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers. GO:0005605 GO:0008003 Wikipedia:Basement_membrane cellular_component basal lamina basement lamina lamina densa GO:0005604 Note that this term has no relationship to 'membrane ; GO:0016020' because the basement membrane is not a lipid bilayer. basement membrane GO:0005604 A collagen-containing extracellular matrix consisting of a thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers. PMID:22505934 PMID:33605520 PMID:39223427 That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. NIF_Subcellular:sao1425028079 cellular_component intercellular space GO:0005615 Note that for multicellular organisms, the extracellular space refers to everything outside a cell, but still within the organism (excluding the extracellular matrix). Gene products from a multi-cellular organism that are secreted from a cell into the interstitial fluid or blood can therefore be annotated to this term. extracellular space GO:0005615 That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. ISBN:0198547684 A component of a cell contained within (but not including) the plasma membrane. In eukaryotes it includes the nucleus and cytoplasm. Wikipedia:Intracellular internal to cell intracellular protoplasm cellular_component nucleocytoplasm protoplast GO:0005622 intracellular anatomical structure GO:0005622 A component of a cell contained within (but not including) the plasma membrane. In eukaryotes it includes the nucleus and cytoplasm. ISBN:0198506732 nucleocytoplasm GOC:mah protoplast GOC:mah A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. NIF_Subcellular:sao1702920020 Wikipedia:Cell_nucleus cell nucleus horsetail nucleus cellular_component GO:0005634 nucleus GO:0005634 A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. GOC:go_curators horsetail nucleus GOC:al GOC:mah GOC:vw PMID:15030757 The double lipid bilayer that encloses the nucleus, separating its contents from the cytoplasm. It consists of an inner and outer nuclear membrane, with an intermembrane space (20-40 nm wide, also called the perinuclear space) between them. The envelope is supported by the nuclear lamina and contains nuclear pore complexes, which regulate molecular transport. GO:0005636 Wikipedia:Nuclear_envelope cellular_component GO:0005635 nuclear envelope GO:0005635 The double lipid bilayer that encloses the nucleus, separating its contents from the cytoplasm. It consists of an inner and outer nuclear membrane, with an intermembrane space (20-40 nm wide, also called the perinuclear space) between them. The envelope is supported by the nuclear lamina and contains nuclear pore complexes, which regulate molecular transport. ISBN:0198547684 PMID:16164970 The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes. NIF_Subcellular:sao1617136075 nucleus outer envelope perinuclear membrane cellular_component GO:0005640 nuclear outer membrane GO:0005640 The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes. ISBN:0198547684 A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. Wikipedia:Chromosome interphase chromosome prophase chromosome cellular_component chromatid GO:0005694 Chromosomes include parts that are not part of the chromatin. Examples include the kinetochore. chromosome GO:0005694 A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. ISBN:0198547684 A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. NIF_Subcellular:sao1820400233 Wikipedia:Nucleolus cellular_component GO:0005730 nucleolus GO:0005730 A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. ISBN:0198506732 The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. Wikipedia:Cytoplasm cellular_component GO:0005737 cytoplasm GO:0005737 The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. ISBN:0198547684 A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol. Wikipedia:Vacuole cellular_component vacuolar carboxypeptidase Y GO:0005773 vacuole GO:0005773 A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol. GOC:mtg_sensu ISBN:0198506732 The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell. cellular_component GO:0005774 vacuolar membrane GO:0005774 The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell. GOC:ai The volume enclosed within the vacuolar membrane. cellular_component GO:0005775 vacuolar lumen GO:0005775 The volume enclosed within the vacuolar membrane. ISBN:0198506732 A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. Golgi NIF_Subcellular:sao451912436 Wikipedia:Golgi_apparatus Golgi complex Golgi ribbon cellular_component GO:0005794 Note that the Golgi apparatus can be located in various places in the cytoplasm. In plants and lower animal cells, the Golgi apparatus exists as many copies of discrete stacks dispersed throughout the cytoplasm, while the Golgi apparatus of interphase mammalian cells is a juxtanuclear, often pericentriolar reticulum, where the discrete Golgi stacks are stitched together to form a compact and interconnected ribbon, sometimes called the Golgi ribbon. Golgi apparatus GO:0005794 A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. ISBN:0198506732 Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell. NIF_Subcellular:sao819927218 cellular_component Golgi vesicle vesicular component GO:0005798 Note that this definition includes vesicles that are transiently associated with the Golgi. Golgi-associated vesicle GO:0005798 Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell. GOC:mah vesicular component NIF_Subcellular:sao138219748 A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle. NIF_Subcellular:sao95019936 Wikipedia:Centriole daughter centriole mother centriole cellular_component GO:0005814 In most eukaryotic cells, 'ciliary basal body' (GO:0036064) and 'centriole' (GO:0005814) represent a common entity that cycles through its function in cell division, then ciliogenesis, then cell division again. However, these structures are modified extensively as they transition into each other, and may contain different proteins, specific to each component. centriole GO:0005814 A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle. ISBN:0198547684 daughter centriole GOC:cilia mother centriole GOC:cilia An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides. Wikipedia:Microtubule_organizing_center MTOC microtubule organising centre cellular_component GO:0005815 microtubule organizing center GO:0005815 An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides. GOC:vw ISBN:0815316194 PMID:17072892 PMID:17245416 Wikipedia:Microtubule_organizing_center The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. NIF_Subcellular:sao101633890 Wikipedia:Cytosol cellular_component GO:0005829 cytosol GO:0005829 The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. GOC:hjd GOC:jl An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins. GO:0033279 NIF_Subcellular:sao1429207766 Wikipedia:Ribosome free ribosome membrane bound ribosome cellular_component ribosomal RNA GO:0005840 ribosome GO:0005840 An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins. ISBN:0198506732 free ribosome NIF_Subcellular:sao1139385046 membrane bound ribosome NIF_Subcellular:sao1291545653 A cellular structure that forms the internal framework of eukaryotic and prokaryotic cells. The cytoskeleton includes intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. Wikipedia:Cytoskeleton cellular_component GO:0005856 cytoskeleton GO:0005856 A cellular structure that forms the internal framework of eukaryotic and prokaryotic cells. The cytoskeleton includes intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. GOC:mah PMID:16959967 PMID:27419875 Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle. NIF_Subcellular:sao1846835077 Wikipedia:Microtubule microtubuli microtubulus neurotubule cellular_component GO:0005874 microtubule GO:0005874 Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle. ISBN:0879693568 neurotubule NIF_Subcellular:sao248349196 A microtubule in the axoneme of a eukaryotic cilium or flagellum; an axoneme contains nine modified doublet microtubules, which may or may not surround a pair of single microtubules. cellular_component GO:0005879 axonemal microtubule GO:0005879 A microtubule in the axoneme of a eukaryotic cilium or flagellum; an axoneme contains nine modified doublet microtubules, which may or may not surround a pair of single microtubules. GOC:cilia ISBN:0815316194 Any microtubule in the nucleus of a cell. cellular_component GO:0005880 nuclear microtubule GO:0005880 Any microtubule in the nucleus of a cell. GOC:mah Any microtubule in the cytoplasm of a cell. non-spindle-associated astral microtubule cellular_component GO:0005881 cytoplasmic microtubule GO:0005881 Any microtubule in the cytoplasm of a cell. GOC:mah A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane. FMA:63850 NIF_Subcellular:sao1588493326 Wikipedia:Actin microfilament cellular_component GO:0005884 actin filament GO:0005884 A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane. GOC:mah ISBN:0198506732 PMID:10666339 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. GO:0005887 GO:0005904 juxtamembrane NIF_Subcellular:sao1663586795 Wikipedia:Cell_membrane cell membrane cellular membrane cytoplasmic membrane plasmalemma bacterial inner membrane inner endospore membrane integral component of plasma membrane integral to plasma membrane plasma membrane lipid bilayer cellular_component GO:0005886 plasma membrane GO:0005886 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. ISBN:0716731363 cellular membrane NIF_Subcellular:sao6433132645 plasma membrane lipid bilayer GOC:mah A cell junction that forms a connection between two or more cells of an organism; excludes direct cytoplasmic intercellular bridges, such as ring canals in insects. cell-cell contact region cell-cell contact zone NIF_Subcellular:sao1922892319 intercellular junction cellular_component GO:0005911 cell-cell junction GO:0005911 A cell junction that forms a connection between two or more cells of an organism; excludes direct cytoplasmic intercellular bridges, such as ring canals in insects. GOC:aruk GOC:bc GOC:dgh GOC:hb GOC:mah PMID:21422226 PMID:28096264 intercellular junction NIF_Subcellular:sao1395777368 A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts. Each cilium is largely bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored to a basal body. GO:0072372 FMA:67181 NIF_Subcellular:sao787716553 Wikipedia:Cilium eukaryotic flagellum microtubule-based flagellum primary cilium cellular_component flagellum GO:0005929 Note that we deem cilium and microtubule-based flagellum to be equivalent. In most eukaryotic species, intracellular sub-components of the cilium, such as the ciliary base and rootlet, are located near the plasma membrane. In Diplomonads such as Giardia, instead, the same ciliary parts are located further intracellularly. Also, 'cilium' may be used when axonemal structure and/or motility are unknown, or when axonemal structure is unusual. For all other cases, please refer to children of 'cilium'. Finally, note that any role of ciliary proteins in sensory events should be captured by annotating to relevant biological process terms. cilium GO:0005929 A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts. Each cilium is largely bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored to a basal body. GOC:cilia GOC:curators GOC:kmv GOC:vw ISBN:0198547684 PMID:16824949 PMID:17009929 PMID:20144998 The bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements. GO:0035085 GO:0035086 Wikipedia:Axoneme ciliary axoneme cilium axoneme flagellar axoneme flagellum axoneme cellular_component GO:0005930 Note that cilia and eukaryotic flagella are deemed to be equivalent. In diplomonad species, such as Giardia, the axoneme may extend intracellularly up to 5um away from the plane of the plasma membrane. axoneme GO:0005930 The bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements. GOC:bf GOC:cilia ISBN:0198547684 The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins. Wikipedia:Cell_cortex ectoplasm cellular_component cell periphery peripheral cytoplasm GO:0005938 cell cortex GO:0005938 The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins. GOC:mah ISBN:0815316194 The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. jl 2012-10-23T15:40:34Z GO:0044261 GO:0044723 Reactome:R-HSA-71387 Wikipedia:Carbohydrate_metabolism carbohydrate metabolism biological_process GO:0005975 carbohydrate metabolic process GO:0005975 The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. GOC:mah ISBN:0198506732 Reactome:R-HSA-71387 Metabolism of carbohydrates The chemical reactions and pathways involving a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically. GO:0044263 polysaccharide metabolism glycan metabolic process glycan metabolism multicellular organismal polysaccharide metabolic process biological_process GO:0005976 polysaccharide metabolic process GO:0005976 The chemical reactions and pathways involving a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically. ISBN:0198547684 The chemical reactions and pathways involving aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages. aminoglycan metabolism biological_process GO:0006022 aminoglycan metabolic process GO:0006022 The chemical reactions and pathways involving aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages. GOC:ai ISBN:0198506732 The chemical reactions and pathways resulting in the formation of aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages. aminoglycan anabolism aminoglycan biosynthesis aminoglycan formation aminoglycan synthesis biological_process GO:0006023 aminoglycan biosynthetic process GO:0006023 The chemical reactions and pathways resulting in the formation of aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages. GOC:ai ISBN:0198506732 The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any one of a group of linear polysaccharides composed of repeating disaccharide units. glycosaminoglycan anabolism glycosaminoglycan biosynthesis glycosaminoglycan formation glycosaminoglycan synthesis biological_process GO:0006024 glycosaminoglycan biosynthetic process GO:0006024 The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any one of a group of linear polysaccharides composed of repeating disaccharide units. PMID:38500384 The chemical reactions and pathways involving organic acids, any acidic compound containing carbon in covalent linkage. organic acid metabolism biological_process GO:0006082 organic acid metabolic process GO:0006082 The chemical reactions and pathways involving organic acids, any acidic compound containing carbon in covalent linkage. ISBN:0198506732 The chemical reactions and pathways involving acetate, the anion of acetic acid. acetate metabolism biological_process GO:0006083 acetate metabolic process GO:0006083 The chemical reactions and pathways involving acetate, the anion of acetic acid. GOC:go_curators Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving carbohydrates. regulation of carbohydrate metabolism biological_process GO:0006109 regulation of carbohydrate metabolic process GO:0006109 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving carbohydrates. GOC:go_curators Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids. GO:0055134 cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolic process cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolism nucleobase, nucleoside, nucleotide and nucleic acid metabolism biological_process nucleobase, nucleoside and nucleotide metabolic process nucleobase, nucleoside, nucleotide and nucleic acid metabolic process GO:0006139 nucleobase-containing compound metabolic process GO:0006139 Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids. GOC:ai nucleobase, nucleoside, nucleotide and nucleic acid metabolic process GOC:dph GOC:tb The assembly or remodeling of chromatin composed of DNA complexed with histones, other associated proteins, and sometimes RNA. GO:0006333 GO:0006336 GO:0016568 GO:0031497 GO:0034724 chromatin maintenance Reactome:R-HSA-4839726 chromatin organisation establishment of chromatin architecture establishment or maintenance of chromatin architecture DNA replication-independent chromatin assembly DNA replication-independent chromatin organization DNA replication-independent nucleosome organisation DNA replication-independent nuclesome assembly chromatin assembly transcription-coupled nucleosome assembly biological_process chromatin assembly or disassembly chromatin assembly/disassembly chromatin modification GO:0006325 chromatin organization GO:0006325 The assembly or remodeling of chromatin composed of DNA complexed with histones, other associated proteins, and sometimes RNA. PMID:20404130 Reactome:R-HSA-4839726 Chromatin organization chromatin organisation GOC:mah establishment of chromatin architecture GOC:mah establishment or maintenance of chromatin architecture GOC:mah A process in which RNA is transported to, or maintained in, a specific location. RNA localisation establishment and maintenance of RNA localization biological_process GO:0006403 RNA localization GO:0006403 A process in which RNA is transported to, or maintained in, a specific location. GOC:ai RNA localisation GOC:mah The import of RNA from the cytoplasm to the nucleus. RNA import into cell nucleus RNA transport from cytoplasm to nucleus RNA-nucleus import biological_process GO:0006404 RNA import into nucleus GO:0006404 The import of RNA from the cytoplasm to the nucleus. GOC:ma The directed movement of RNA from the nucleus to the cytoplasm. RNA export from cell nucleus RNA export out of nucleus RNA transport from nucleus to cytoplasm RNA-nucleus export biological_process GO:0006405 RNA export from nucleus GO:0006405 The directed movement of RNA from the nucleus to the cytoplasm. GOC:ma The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome. GO:0006416 GO:0006453 GO:0043037 Reactome:R-HSA-72766 Wikipedia:Translation_(genetics) protein anabolism protein biosynthesis protein biosynthetic process protein formation protein synthesis protein translation biological_process GO:0006412 translation GO:0006412 The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome. GOC:go_curators Reactome:R-HSA-72766 Translation The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA. GO:0006440 GO:0006454 biopolymerisation biopolymerization protein synthesis initiation Reactome:R-HSA-72613 translation initiation biological_process GO:0006413 translational initiation GO:0006413 The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA. ISBN:019879276X Reactome:R-HSA-72613 Eukaryotic Translation Initiation The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis. GO:0006442 GO:0006455 protein synthesis elongation Reactome:R-HSA-156842 translation elongation biological_process GO:0006414 translational elongation GO:0006414 The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis. GOC:ems Reactome:R-HSA-156842 Eukaryotic Translation Elongation The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code). GO:0006443 GO:0006456 protein synthesis termination Reactome:R-HSA-72764 translation termination translational complex disassembly biological_process GO:0006415 translational termination GO:0006415 The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code). GOC:hjd ISBN:019879276X Reactome:R-HSA-72764 Eukaryotic Translation Termination Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA. GO:0006445 regulation of protein anabolism regulation of protein biosynthesis regulation of protein formation regulation of protein synthesis biological_process GO:0006417 regulation of translation GO:0006417 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA. GOC:isa_complete Any process that modulates the frequency, rate or extent of translational initiation. biological_process GO:0006446 regulation of translational initiation GO:0006446 Any process that modulates the frequency, rate or extent of translational initiation. GOC:go_curators Any process that modulates the frequency, rate, extent or accuracy of translational elongation. biological_process GO:0006448 regulation of translational elongation GO:0006448 Any process that modulates the frequency, rate, extent or accuracy of translational elongation. GOC:go_curators Any process that modulates the frequency, rate or extent of translational termination. biological_process GO:0006449 regulation of translational termination GO:0006449 Any process that modulates the frequency, rate or extent of translational termination. GOC:go_curators The chemical reactions and pathways involving peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. Reactome:R-HSA-2980736 peptide metabolism biological_process GO:0006518 peptide metabolic process GO:0006518 The chemical reactions and pathways involving peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. GOC:go_curators Reactome:R-HSA-2980736 Peptide hormone metabolism The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups. GO:0006519 cellular amino acid metabolic process cellular amino acid metabolism biological_process amino acid and derivative metabolism cellular amino acid and derivative metabolic process GO:0006520 amino acid metabolic process GO:0006520 The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups. ISBN:0198506732 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving amino acids. Reactome:R-HSA-350562 regulation of amino acid metabolism biological_process GO:0006521 regulation of amino acid metabolic process GO:0006521 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving amino acids. GOC:go_curators Reactome:R-HSA-350562 Regulation of ornithine decarboxylase (ODC) The chemical reactions and pathways occurring at the level of individual cells involving any of a group of naturally occurring, biologically active amines, such as norepinephrine, histamine, and serotonin, many of which act as neurotransmitters. biogenic amine metabolism cellular biogenic amine metabolic process biological_process GO:0006576 biogenic amine metabolic process GO:0006576 The chemical reactions and pathways occurring at the level of individual cells involving any of a group of naturally occurring, biologically active amines, such as norepinephrine, histamine, and serotonin, many of which act as neurotransmitters. GOC:jl ISBN:0395825172 The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine. catecholamine metabolism biological_process GO:0006584 catecholamine metabolic process GO:0006584 The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine. GOC:jl ISBN:0198506732 The chemical reactions and pathways involving indolalkylamines, indole or indole derivatives containing a primary, secondary, or tertiary amine group. indolamine metabolic process indolamine metabolism indolalkylamine metabolism biological_process GO:0006586 indolalkylamine metabolic process GO:0006586 The chemical reactions and pathways involving indolalkylamines, indole or indole derivatives containing a primary, secondary, or tertiary amine group. GOC:curators The directed movement of a protein from the cytoplasm to the nucleus. establishment of protein localization to nucleus protein import into cell nucleus protein nucleus import protein transport from cytoplasm to nucleus biological_process GO:0006606 protein import into nucleus GO:0006606 The directed movement of a protein from the cytoplasm to the nucleus. GOC:jl establishment of protein localization to nucleus GOC:mah The directed movement of a protein from the nucleus into the cytoplasm. GO:0097349 protein export from cell nucleus protein export out of nucleus protein transport from nucleus to cytoplasm protein-nucleus export biological_process copper-induced protein export from nucleus GO:0006611 protein export from nucleus GO:0006611 The directed movement of a protein from the nucleus into the cytoplasm. GOC:jl copper-induced protein export from nucleus GOC:al The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. Reactome:R-HSA-556833 Wikipedia:Lipid_metabolism lipid metabolism biological_process GO:0006629 lipid metabolic process GO:0006629 The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. GOC:ma Reactome:R-HSA-556833 Metabolism of lipids The chemical reactions and pathways involving membrane lipids, any lipid found in or associated with a biological membrane. membrane lipid metabolism biological_process GO:0006643 membrane lipid metabolic process GO:0006643 The chemical reactions and pathways involving membrane lipids, any lipid found in or associated with a biological membrane. GOC:ai The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification. Wikipedia:Steroid_metabolisms#Steroid_biosynthesis steroid anabolism steroid biosynthesis steroid formation steroid synthesis steroidogenesis biological_process GO:0006694 steroid biosynthetic process GO:0006694 The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification. GOC:go_curators The chemical reactions and pathways involving the nonmetallic element sulfur or compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione. Wikipedia:Sulfur_metabolism sulfur metabolism sulphur metabolic process sulphur metabolism biological_process GO:0006790 sulfur compound metabolic process GO:0006790 The chemical reactions and pathways involving the nonmetallic element sulfur or compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione. GOC:ai The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or a transporter complex, a pore or a motor protein. jl 2012-12-13T16:25:32Z GO:0015457 GO:0015460 GO:0044765 Reactome:R-HSA-382551 biological_process single-organism transport GO:0006810 Note that this term should not be used for direct annotation. It should be possible to make a more specific annotation to one of the children of this term, for e.g. to transmembrane transport, to microtubule-based transport or to vesicle-mediated transport. transport GO:0006810 The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or a transporter complex, a pore or a motor protein. GOC:dos GOC:dph GOC:jl GOC:mah Reactome:R-HSA-382551 Transport of small molecules The directed movement of a monoatomic ion into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Monatomic ions (also called simple ions) are ions consisting of exactly one atom. ion transport Reactome:R-HSA-425393 biological_process GO:0006811 monoatomic ion transport GO:0006811 The directed movement of a monoatomic ion into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Monatomic ions (also called simple ions) are ions consisting of exactly one atom. GOC:ai Reactome:R-HSA-425393 Transport of inorganic cations/anions and amino acids/oligopeptides The directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell. Reactome:R-HSA-181429 Reactome:R-HSA-181430 Reactome:R-HSA-210500 Reactome:R-HSA-212676 Reactome:R-HSA-264642 sodium:neurotransmitter transport biological_process GO:0006836 neurotransmitter transport GO:0006836 The directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell. GOC:ai Reactome:R-HSA-181429 Serotonin Neurotransmitter Release Cycle Reactome:R-HSA-181430 Norepinephrine Neurotransmitter Release Cycle Reactome:R-HSA-210500 Glutamate Neurotransmitter Release Cycle Reactome:R-HSA-212676 Dopamine Neurotransmitter Release Cycle Reactome:R-HSA-264642 Acetylcholine Neurotransmitter Release Cycle The directed movement of serotonin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Serotonin (5-hydroxytryptamine) is a monoamine neurotransmitter occurring in the peripheral and central nervous systems. biological_process GO:0006837 serotonin transport GO:0006837 The directed movement of serotonin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Serotonin (5-hydroxytryptamine) is a monoamine neurotransmitter occurring in the peripheral and central nervous systems. GOC:ai The directed movement of acetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process GO:0006846 acetate transport GO:0006846 The directed movement of acetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:krc The directed movement of acetate across a plasma membrane. biological_process GO:0006847 plasma membrane acetate transport GO:0006847 The directed movement of acetate across a plasma membrane. GOC:ai The transport of substances that occurs outside cells. biological_process GO:0006858 extracellular transport GO:0006858 The transport of substances that occurs outside cells. GOC:go_curators The directed extracellular movement of amino acids. biological_process GO:0006860 extracellular amino acid transport GO:0006860 The directed extracellular movement of amino acids. GOC:ai The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GO:0006866 Reactome:R-HSA-352230 biological_process GO:0006865 amino acid transport GO:0006865 The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai Reactome:R-HSA-352230 Amino acid transport across the plasma membrane The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Reactome:R-HSA-1369062 biological_process GO:0006869 lipid transport GO:0006869 The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. ISBN:0198506732 Reactome:R-HSA-1369062 ABC transporters in lipid homeostasis The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. GO:0032779 biological_process copper-induced intracellular protein transport GO:0006886 intracellular protein transport GO:0006886 The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. GOC:mah copper-induced intracellular protein transport GOC:al A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for example of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell. GO:0016194 GO:0016195 Wikipedia:Exocytosis vesicle exocytosis biological_process nonselective vesicle exocytosis GO:0006887 exocytosis GO:0006887 A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for example of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell. GOC:mah ISBN:0716731363 PMID:22323285 The directed movement of substances from the Golgi to other parts of the cell, including organelles and the plasma membrane, mediated by small transport vesicles. Reactome:R-HSA-199992 post-Golgi transport biological_process GO:0006892 post-Golgi vesicle-mediated transport GO:0006892 The directed movement of substances from the Golgi to other parts of the cell, including organelles and the plasma membrane, mediated by small transport vesicles. GOC:ai GOC:mah Reactome:R-HSA-199992 trans-Golgi Network Vesicle Budding The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis. Golgi to plasma membrane vesicle-mediated transport biological_process GO:0006893 Golgi to plasma membrane transport GO:0006893 The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis. ISBN:0716731363 The directed movement of substances from the Golgi to the vacuole. Golgi to vacuole vesicle-mediated transport biological_process GO:0006896 Golgi to vacuole transport GO:0006896 The directed movement of substances from the Golgi to the vacuole. GOC:ai The process in which vesicles are directed to specific destination membranes. Targeting involves coordinated interactions among cytoskeletal elements (microtubules or actin filaments), motor proteins, molecules at the vesicle membrane and target membrane surfaces, and vesicle cargo. biological_process GO:0006903 vesicle targeting GO:0006903 The process in which vesicles are directed to specific destination membranes. Targeting involves coordinated interactions among cytoskeletal elements (microtubules or actin filaments), motor proteins, molecules at the vesicle membrane and target membrane surfaces, and vesicle cargo. GOC:mah PMID:17335816 Fusion of the membrane of a transport vesicle with its target membrane. biological_process GO:0006906 vesicle fusion GO:0006906 Fusion of the membrane of a transport vesicle with its target membrane. GOC:jid The directed movement of molecules between the nucleus and the cytoplasm. GO:0000063 nucleocytoplasmic shuttling biological_process GO:0006913 Note that transport through the nuclear pore complex is not transmembrane because the nuclear membrane is a double membrane, and is not traversed. nucleocytoplasmic transport GO:0006913 The directed movement of molecules between the nucleus and the cytoplasm. GOC:go_curators A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died. GO:0006917 GO:0008632 cell suicide cellular suicide Reactome:R-HSA-109581 Wikipedia:Apoptosis apoptotic cell death apoptotic programmed cell death programmed cell death by apoptosis activation of apoptosis apoptosis apoptosis signaling apoptotic program type I programmed cell death biological_process apoptosis activator activity caspase-dependent programmed cell death commitment to apoptosis induction of apoptosis induction of apoptosis by p53 signaling (initiator) caspase activity GO:0006915 apoptotic process GO:0006915 A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died. GOC:cjm GOC:dhl GOC:ecd GOC:go_curators GOC:mtg_apoptosis GOC:tb ISBN:0198506732 PMID:18846107 PMID:21494263 Reactome:R-HSA-109581 Apoptosis apoptotic cell death GOC:sl apoptotic program GOC:add The breakdown of structures such as organelles, proteins, or other macromolecular structures during apoptosis. cellular component disassembly involved in apoptotic process disassembly of cell structures cellular component disassembly involved in apoptosis biological_process GO:0006921 cellular component disassembly involved in execution phase of apoptosis GO:0006921 The breakdown of structures such as organelles, proteins, or other macromolecular structures during apoptosis. GOC:dph GOC:mah GOC:mtg_apoptosis GOC:tb A process in which force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Reactome:R-HSA-445355 Wikipedia:Muscle_contraction biological_process GO:0006936 muscle contraction GO:0006936 A process in which force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. GOC:ef GOC:mtg_muscle ISBN:0198506732 Reactome:R-HSA-445355 Smooth Muscle Contraction Any process that modulates the frequency, rate or extent of muscle contraction. biological_process GO:0006937 regulation of muscle contraction GO:0006937 Any process that modulates the frequency, rate or extent of muscle contraction. GOC:go_curators A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length. visceral muscle contraction biological_process GO:0006939 smooth muscle contraction GO:0006939 A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length. GOC:ef GOC:jl GOC:mtg_muscle ISBN:0198506732 Any process that modulates the frequency, rate or extent of smooth muscle contraction. biological_process GO:0006940 regulation of smooth muscle contraction GO:0006940 Any process that modulates the frequency, rate or extent of smooth muscle contraction. GOC:go_curators A process in which force is generated within striated muscle tissue, resulting in the shortening of the muscle. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope. sarcomeric muscle contraction biological_process GO:0006941 striated muscle contraction GO:0006941 A process in which force is generated within striated muscle tissue, resulting in the shortening of the muscle. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope. GOC:jl GOC:mtg_muscle ISBN:0198506732 Any process that modulates the frequency, rate or extent of striated muscle contraction. biological_process GO:0006942 regulation of striated muscle contraction GO:0006942 Any process that modulates the frequency, rate or extent of striated muscle contraction. GOC:go_curators The formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane. Syncytia are normally derived from single cells that fuse or fail to complete cell division. biological_process GO:0006949 syncytium formation GO:0006949 The formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane. Syncytia are normally derived from single cells that fuse or fail to complete cell division. ISBN:0198506732 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation). biological_process response to abiotic stress response to biotic stress GO:0006950 response to stress GO:0006950 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation). GOC:mah Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. GO:0002217 GO:0042829 defence response physiological defense response biological_process antimicrobial peptide activity defense/immunity protein activity GO:0006952 defense response GO:0006952 Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. GOC:go_curators The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages. inflammation Wikipedia:Inflammation biological_process GO:0006954 inflammatory response GO:0006954 The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages. GO_REF:0000022 ISBN:0198506732 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. jl 2013-12-19T15:25:51Z GO:1902589 Reactome:R-HSA-1852241 organelle organisation single organism organelle organization biological_process organelle organization and biogenesis single-organism organelle organization GO:0006996 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. organelle organization GO:0006996 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. GOC:mah Reactome:R-HSA-1852241 Organelle biogenesis and maintenance single organism organelle organization GOC:TermGenie organelle organization and biogenesis GOC:dph GOC:jl GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleus. GO:0048287 nuclear organisation nuclear organization biological_process nuclear morphology nuclear organization and biogenesis nucleus organization and biogenesis GO:0006997 nucleus organization GO:0006997 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleus. GOC:dph GOC:ems GOC:jl GOC:mah nuclear organization and biogenesis GOC:mah nucleus organization and biogenesis GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear envelope. nuclear envelope organisation biological_process nuclear envelope organization and biogenesis GO:0006998 nuclear envelope organization GO:0006998 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear envelope. GOC:dph GOC:ems GOC:jl GOC:mah nuclear envelope organisation GOC:mah nuclear envelope organization and biogenesis GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleolus. nucleolus organisation biological_process nucleolus organization and biogenesis GO:0007000 nucleolus organization GO:0007000 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleolus. GOC:dph GOC:jid GOC:jl GOC:mah nucleolus organization and biogenesis GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the plasma membrane. plasma membrane organisation biological_process plasma membrane organization and biogenesis GO:0007009 plasma membrane organization GO:0007009 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the plasma membrane. GOC:dph GOC:jl GOC:mah plasma membrane organization and biogenesis GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures. cytoskeleton organisation biological_process cytoskeletal organization and biogenesis cytoskeletal regulator activity cytoskeleton organization and biogenesis GO:0007010 cytoskeleton organization GO:0007010 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures. GOC:dph GOC:jl GOC:mah cytoskeletal organization and biogenesis GOC:mah cytoskeleton organization and biogenesis GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking. actin filament organisation regulation of actin filament localization biological_process GO:0007015 actin filament organization GO:0007015 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking. GOC:mah Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins. biological_process GO:0007017 microtubule-based process GO:0007017 Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins. GOC:mah A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules. Reactome:R-HSA-983189 biological_process GO:0007018 microtubule-based movement GO:0007018 A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules. GOC:cjm ISBN:0815316194 Reactome:R-HSA-983189 Kinesins The removal of tubulin heterodimers from one or both ends of a microtubule. microtubule disassembly microtubule shortening microtubule catastrophe microtubule depolymerization during nuclear congression biological_process GO:0007019 microtubule depolymerization GO:0007019 The removal of tubulin heterodimers from one or both ends of a microtubule. ISBN:0815316194 microtubule catastrophe GOC:dph GOC:tb The process in which tubulin alpha-beta heterodimers begin aggregation to form an oligomeric tubulin structure (a microtubule seed). Microtubule nucleation is the initiating step in the formation of a microtubule in the absence of any existing microtubules ('de novo' microtubule formation). Wikipedia:Microtubule_nucleation biological_process GO:0007020 microtubule nucleation GO:0007020 The process in which tubulin alpha-beta heterodimers begin aggregation to form an oligomeric tubulin structure (a microtubule seed). Microtubule nucleation is the initiating step in the formation of a microtubule in the absence of any existing microtubules ('de novo' microtubule formation). GOC:go_curators ISBN:0815316194 PMID:12517712 Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol. down regulation of microtubule depolymerization down-regulation of microtubule depolymerization downregulation of microtubule depolymerization microtubule stabilization negative regulation of microtubule disassembly inhibition of microtubule depolymerization microtubule rescue negative regulation of microtubule catastrophe biological_process GO:0007026 negative regulation of microtubule depolymerization GO:0007026 Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol. GOC:mah ISBN:0815316194 microtubule rescue GOC:dph GOC:tb negative regulation of microtubule catastrophe GOC:dph GOC:tb Any process that stops, prevents, or reduces the frequency, rate or extent of the depolymerization of the specialized microtubules of the axoneme. axonemal microtubule stabilization biological_process negative regulation of microtubule depolymerization in axoneme GO:0007027 negative regulation of axonemal microtubule depolymerization GO:0007027 Any process that stops, prevents, or reduces the frequency, rate or extent of the depolymerization of the specialized microtubules of the axoneme. GOC:dph GOC:mah negative regulation of microtubule depolymerization in axoneme GOC:dph A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the cytoplasm. The cytoplasm is all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. cytoplasm organisation biological_process cytoplasm organization and biogenesis GO:0007028 cytoplasm organization GO:0007028 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the cytoplasm. The cytoplasm is all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. GOC:curators GOC:dph GOC:jl GOC:mah cytoplasm organization and biogenesis GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the Golgi apparatus. Golgi apparatus organization Golgi organisation biological_process Golgi organization and biogenesis GO:0007030 Golgi organization GO:0007030 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the Golgi apparatus. GOC:dph GOC:jl GOC:mah Golgi organization and biogenesis GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a vacuole. GO:0044086 vacuole organisation vacuolar assembly biological_process vacuole biogenesis vacuole organization and biogenesis GO:0007033 vacuole organization GO:0007033 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a vacuole. GOC:mah vacuolar assembly GOC:mah vacuole biogenesis GOC:mah vacuole organization and biogenesis GOC:mah The directed movement of substances into, out of or within a vacuole. biological_process GO:0007034 vacuolar transport GO:0007034 The directed movement of substances into, out of or within a vacuole. GOC:ai The aggregation, arrangement and bonding together of a set of components to form a junction between cells. intercellular junction assembly biological_process GO:0007043 cell-cell junction assembly GO:0007043 The aggregation, arrangement and bonding together of a set of components to form a junction between cells. GOC:ai The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division. Reactome:R-HSA-1640170 Wikipedia:Cell_cycle cell-division cycle biological_process GO:0007049 cell cycle GO:0007049 The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division. GOC:go_curators GOC:mtg_cell_cycle Reactome:R-HSA-1640170 Cell Cycle The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets. In eukaryotes, chromosome segregation begins with the condensation of chromosomes, includes chromosome separation, and ends when chromosomes have completed movement to the spindle poles. Wikipedia:Chromosome_segregation chromosome division biological_process chromosome transmission GO:0007059 chromosome segregation GO:0007059 The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets. In eukaryotes, chromosome segregation begins with the condensation of chromosomes, includes chromosome separation, and ends when chromosomes have completed movement to the spindle poles. GOC:jl GOC:mah GOC:mtg_cell_cycle GOC:vw The cell cycle process in which chromatin structure is compacted prior to and during mitosis in eukaryotic cells. Reactome:R-HSA-2299718 Reactome:R-HSA-2514853 biological_process GO:0007076 mitotic chromosome condensation GO:0007076 The cell cycle process in which chromatin structure is compacted prior to and during mitosis in eukaryotic cells. GOC:mah ISBN:0815316194 Reactome:R-HSA-2299718 Condensation of Prophase Chromosomes Reactome:R-HSA-2514853 Condensation of Prometaphase Chromosomes The mitotic cell cycle process in which the controlled partial or complete breakdown of the nuclear membranes during occurs during mitosis. NEB local NEB nuclear envelope breakdown Reactome:R-HSA-2980766 mitotic nuclear envelope breakdown biological_process mitotic nuclear envelope catabolism mitotic nuclear envelope degradation mitotic nuclear envelope disassembly GO:0007077 mitotic nuclear membrane disassembly GO:0007077 The mitotic cell cycle process in which the controlled partial or complete breakdown of the nuclear membranes during occurs during mitosis. GOC:bf PMID:32848252 Reactome:R-HSA-2980766 Nuclear Envelope Breakdown Any process that modulates the frequency, rate or extent of mitosis. regulation of mitosis biological_process GO:0007088 regulation of mitotic nuclear division GO:0007088 Any process that modulates the frequency, rate or extent of mitosis. GOC:go_curators The directed movement of the nucleus to a specific location within a cell. GO:0040023 establishment of position of nucleus nuclear movement nuclear positioning nucleus migration nucleus positioning positioning of nucleus biological_process establishment of cell nucleus localization establishment of localization of nucleus establishment of nucleus localisation establishment of nucleus localization GO:0007097 nuclear migration GO:0007097 The directed movement of the nucleus to a specific location within a cell. GOC:ai establishment of nucleus localisation GOC:mah A mitotic cell cycle in which chromosomes are replicated and sister chromatids separate, but spindle formation, nuclear membrane breakdown and nuclear division do not occur, resulting in an increased number of chromosomes in the cell. Wikipedia:Mitosis#Endomitosis biological_process endomitosis GO:0007113 Note that this term should not be confused with 'abortive mitotic cell cycle ; GO:0033277'. Although abortive mitosis is sometimes called endomitosis, GO:0033277 refers to a process in which a mitotic spindle forms and chromosome separation begins. endomitotic cell cycle GO:0007113 A mitotic cell cycle in which chromosomes are replicated and sister chromatids separate, but spindle formation, nuclear membrane breakdown and nuclear division do not occur, resulting in an increased number of chromosomes in the cell. GOC:curators GOC:dos GOC:expert_vm A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the female germline. female meiosis female meiotic division biological_process GO:0007143 Note that female germ lines can be found in female or hermaphroditic organisms, so this term can be used to annotate gene products from hermaphrodites such as those of C. elegans. See also the biological process term 'meiotic nuclear division; GO:0140013'. female meiotic nuclear division GO:0007143 A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the female germline. GOC:dph GOC:ems GOC:mah GOC:vw Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. Wikipedia:Cell_signaling biological_process GO:0007154 cell communication GO:0007154 Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. GOC:mah Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns. GO:0030012 GO:0030467 biological_process cell polarity establishment and/or maintenance of cell polarity establishment and/or maintenance of cell polarization GO:0007163 establishment or maintenance of cell polarity GO:0007163 Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns. GOC:mah cell polarity GOC:mah GOC:vw The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. GO:0023014 GO:0023015 GO:0023016 GO:0023033 GO:0023045 Reactome:R-HSA-212718 Wikipedia:Signal_transduction signaling cascade signalling cascade biological_process signaling pathway signalling pathway GO:0007165 Note that signal transduction is defined broadly to include a ligand interacting with a receptor, downstream signaling steps and a response being triggered. A change in form of the signal in every step is not necessary. Note that in many cases the end of this process is regulation of the initiation of transcription. Note that specific transcription factors may be annotated to this term, but core/general transcription machinery such as RNA polymerase should not. signal transduction GO:0007165 The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. GOC:go_curators GOC:mtg_signaling_feb11 Reactome:R-HSA-212718 EGFR interacts with phospholipase C-gamma Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions. cell-cell signalling biological_process GO:0007267 cell-cell signaling GO:0007267 Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions. GOC:dos GOC:mah The vesicular release of classical neurotransmitter molecules from a presynapse, across a chemical synapse, the subsequent activation of neurotransmitter receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse. signal transmission across a synapse synaptic transmission Reactome:R-HSA-112316 Reactome:R-HSA-442720 Reactome:R-HSA-442729 Reactome:R-HSA-442742 Reactome:R-HSA-451307 Reactome:R-HSA-451308 Reactome:R-HSA-9619229 Reactome:R-HSA-9619483 Reactome:R-HSA-9620244 Wikipedia:Neurotransmission biological_process neurotransmission GO:0007268 chemical synaptic transmission GO:0007268 The vesicular release of classical neurotransmitter molecules from a presynapse, across a chemical synapse, the subsequent activation of neurotransmitter receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse. GOC:jl MeSH:D009435 Reactome:R-HSA-112316 Neuronal System Reactome:R-HSA-442720 CREB1 phosphorylation through the activation of Adenylate Cyclase Reactome:R-HSA-442729 CREB1 phosphorylation through the activation of CaMKII/CaMKK/CaMKIV cascasde Reactome:R-HSA-442742 CREB1 phosphorylation through NMDA receptor-mediated activation of RAS signaling Reactome:R-HSA-451307 Activation of Na-permeable kainate receptors Reactome:R-HSA-451308 Activation of Ca-permeable Kainate Receptor Reactome:R-HSA-9619229 Activation of RAC1 downstream of NMDARs Reactome:R-HSA-9619483 Activation of AMPK downstream of NMDARs Reactome:R-HSA-9620244 Long-term potentiation neurotransmission GOC:dph The regulated release of neurotransmitter from the presynapse into the synaptic cleft via calcium-regulated exocytosis during synaptic transmission. GO:0010554 Reactome:R-HSA-112310 neurotransmitter release neurotransmitter secretory pathway biological_process GO:0007269 A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin. neurotransmitter secretion GO:0007269 The regulated release of neurotransmitter from the presynapse into the synaptic cleft via calcium-regulated exocytosis during synaptic transmission. GOC:dph Reactome:R-HSA-112310 Neurotransmitter release cycle The vesicular release of acetylcholine from a presynapse, across a chemical synapse, the subsequent activation of dopamine receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse. cholinergic synaptic transmission biological_process GO:0007271 synaptic transmission, cholinergic GO:0007271 The vesicular release of acetylcholine from a presynapse, across a chemical synapse, the subsequent activation of dopamine receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse. GOC:dos Wikipedia:Cholinergic The process in which glial cells envelop neuronal cell bodies and/or axons to form an insulating layer. This can take the form of myelinating or non-myelinating ensheathment. biological_process ionic insulation of neurons by glial cells GO:0007272 ensheathment of neurons GO:0007272 The process in which glial cells envelop neuronal cell bodies and/or axons to form an insulating layer. This can take the form of myelinating or non-myelinating ensheathment. GOC:dgh GOC:dph GOC:tb The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). biological_process GO:0007275 Note that this term was 'developmental process'. multicellular organism development GO:0007275 The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). GOC:dph GOC:ems GOC:isa_complete GOC:tb The generation and maintenance of gametes in a multicellular organism. A gamete is a haploid reproductive cell. GO:0009552 biological_process gametogenesis GO:0007276 gamete generation GO:0007276 The generation and maintenance of gametes in a multicellular organism. A gamete is a haploid reproductive cell. GOC:ems GOC:mtg_sensu The process whose specific outcome is the progression of an immature germ cell over time, from its formation to the mature structure (gamete). A germ cell is any reproductive cell in a multicellular organism. Reactome:R-HSA-9827857 germ-cell development gametogenesis primordial germ cell development biological_process GO:0007281 germ cell development GO:0007281 The process whose specific outcome is the progression of an immature germ cell over time, from its formation to the mature structure (gamete). A germ cell is any reproductive cell in a multicellular organism. GOC:go_curators Reactome:R-HSA-9827857 Specification of primordial germ cells Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction. biological_process GO:0007292 female gamete generation GO:0007292 Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction. GOC:dph ISBN:0198506732 Construction of a stage-1 egg chamber in the anterior part of the germarium, from the progeny of germ-line and somatic stem cells. An example of this is found in Drosophila melanogaster. biological_process GO:0007293 germarium-derived egg chamber formation GO:0007293 Construction of a stage-1 egg chamber in the anterior part of the germarium, from the progeny of germ-line and somatic stem cells. An example of this is found in Drosophila melanogaster. GOC:mtg_sensu ISBN:0879694238 The synthesis, deposition, and organization of the materials in a cell of an ovary; where the cell can then undergo meiosis and form an ovum. An example of this is found in Drosophila melanogaster. GO:0048110 oocyte arrangement biological_process GO:0007308 oocyte construction GO:0007308 The synthesis, deposition, and organization of the materials in a cell of an ovary; where the cell can then undergo meiosis and form an ovum. An example of this is found in Drosophila melanogaster. GOC:dph GOC:ems GOC:mtg_sensu GOC:tb ISBN:0198506732 oocyte arrangement GOC:dph GOC:tb The union of male and female gametes to form a zygote. Reactome:R-HSA-1187000 biological_process zygote biosynthesis zygote formation GO:0007338 single fertilization GO:0007338 The union of male and female gametes to form a zygote. GOC:ems GOC:mtg_sensu Reactome:R-HSA-1187000 Fertilization The process in which the egg becomes metabolically active, initiates protein and DNA synthesis and undergoes structural changes to its cortex and/or cytoplasm. Wikipedia:Egg_activation biological_process GO:0007343 egg activation GO:0007343 The process in which the egg becomes metabolically active, initiates protein and DNA synthesis and undergoes structural changes to its cortex and/or cytoplasm. GOC:bf PMID:9630751 Any process that modulates the rate or extent of progress through the mitotic cell cycle. Reactome:R-HSA-2465910 Reactome:R-HSA-68911 mitotic cell cycle modulation mitotic cell cycle regulation modulation of mitotic cell cycle progression regulation of mitotic cell cycle progression regulation of progression through mitotic cell cycle biological_process mitotic cell cycle regulator GO:0007346 regulation of mitotic cell cycle GO:0007346 Any process that modulates the rate or extent of progress through the mitotic cell cycle. GOC:dph GOC:go_curators GOC:tb Reactome:R-HSA-2465910 MASTL Facilitates Mitotic Progression Reactome:R-HSA-68911 G2 Phase regulation of progression through mitotic cell cycle GOC:dph GOC:tb The hierarchical steps resulting in the progressive subdivision of the anterior/posterior axis of the embryo. biological_process GO:0007350 blastoderm segmentation GO:0007350 The hierarchical steps resulting in the progressive subdivision of the anterior/posterior axis of the embryo. ISBN:0879694238 http://fly.ebi.ac.uk/allied-data/lk/interactive-fly/aimain/1aahome.htm A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm. Reactome:R-HSA-9758941 Wikipedia:Gastrulation biological_process GO:0007369 gastrulation GO:0007369 A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm. GOC:curators ISBN:9780878933846 Reactome:R-HSA-9758941 Gastrulation Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate. biological_process pattern biosynthesis pattern formation GO:0007389 pattern specification process GO:0007389 Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate. GOC:go_curators GOC:isa_complete ISBN:0521436125 The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation. biological_process GO:0007398 ectoderm development GO:0007398 The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation. GOC:dph GOC:tb The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state. Reactome:R-HSA-9675108 biological_process pan-neural process GO:0007399 nervous system development GO:0007399 The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state. GOC:dgh Reactome:R-HSA-9675108 Nervous system development The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron. GO:0043349 GO:0043350 biological_process GO:0007405 neuroblast proliferation GO:0007405 The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron. GOC:ai GOC:mtg_sensu GOC:sart Any process that stops, prevents, or reduces the frequency, rate or extent of the proliferation of neuroblasts. down regulation of neuroblast proliferation down-regulation of neuroblast proliferation downregulation of neuroblast proliferation suppression of neuroblast proliferation inhibition of neuroblast proliferation biological_process GO:0007406 negative regulation of neuroblast proliferation GO:0007406 Any process that stops, prevents, or reduces the frequency, rate or extent of the proliferation of neuroblasts. GOC:ai A change in the morphology or behavior of a neuroblast resulting from exposure to an activating factor such as a cellular or soluble ligand. GO:0043351 GO:0043352 biological_process GO:0007407 neuroblast activation GO:0007407 A change in the morphology or behavior of a neuroblast resulting from exposure to an activating factor such as a cellular or soluble ligand. GOC:go_curators GOC:mtg_sensu De novo generation of a long process of a neuron, including the terminal branched region. Refers to the morphogenesis or creation of shape or form of the developing axon, which carries efferent (outgoing) action potentials from the cell body towards target cells. GO:0007410 axon morphogenesis axon growth biological_process GO:0007409 Note that 'axonogenesis' differs from 'axon development' in that the latter also covers other processes, such as axon regeneration (regrowth after loss or damage, not necessarily of the whole axon). axonogenesis GO:0007409 De novo generation of a long process of a neuron, including the terminal branched region. Refers to the morphogenesis or creation of shape or form of the developing axon, which carries efferent (outgoing) action potentials from the cell body towards target cells. GOC:dph GOC:jid GOC:pg GOC:pr ISBN:0198506732 axon morphogenesis GOC:bf PMID:23517308 The aggregation, arrangement and bonding together of a set of components to form a synapse. This process ends when the synapse is mature (functional). Wikipedia:Synaptogenesis synapse biogenesis synaptogenesis biological_process GO:0007416 synapse assembly GO:0007416 The aggregation, arrangement and bonding together of a set of components to form a synapse. This process ends when the synapse is mature (functional). GOC:mah synapse biogenesis GOC:mah synaptogenesis GOC:mah The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord. Wikipedia:Neural_development CNS development biological_process GO:0007417 central nervous system development GO:0007417 The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord. GOC:bf GOC:jid ISBN:0582227089 The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.). biological_process GO:0007420 brain development GO:0007420 The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.). GOC:dph GOC:jid GOC:tb UBERON:0000955 The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands. biological_process GO:0007422 peripheral nervous system development GO:0007422 The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands. GOC:go_curators UBERON:0000010 The process whose specific outcome is the progression of sensory organs over time, from its formation to the mature structure. sense organ development biological_process GO:0007423 sensory organ development GO:0007423 The process whose specific outcome is the progression of sensory organs over time, from its formation to the mature structure. GOC:go_curators sense organ development GOC:dph The process whose specific outcome is the progression of the ectodermal digestive tract over time, from its formation to the mature structure. The ectodermal digestive tract includes those portions that are derived from ectoderm. biological_process ectodermal gut development GO:0007439 ectodermal digestive tract development GO:0007439 The process whose specific outcome is the progression of the ectodermal digestive tract over time, from its formation to the mature structure. The ectodermal digestive tract includes those portions that are derived from ectoderm. GOC:curators ectodermal gut development GOC:dph The process in which the anatomical structures of the foregut are generated and organized. biological_process GO:0007440 foregut morphogenesis GO:0007440 The process in which the anatomical structures of the foregut are generated and organized. GOC:jid The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues. biological_process GO:0007492 endoderm development GO:0007492 The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues. GOC:dph GOC:tb The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue. biological_process GO:0007498 mesoderm development GO:0007498 The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue. GOC:dph GOC:tb The process whose specific outcome is the progression of the gonadal mesoderm over time, from its formation to the mature structure. The gonadal mesoderm is the middle layer of the three primary germ layers of the embryo which will go on to form the gonads of the organism. biological_process GO:0007506 gonadal mesoderm development GO:0007506 The process whose specific outcome is the progression of the gonadal mesoderm over time, from its formation to the mature structure. The gonadal mesoderm is the middle layer of the three primary germ layers of the embryo which will go on to form the gonads of the organism. GOC:ai The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood. GO:0007511 Wikipedia:Heart_development dorsal vessel development biological_process cardiac development GO:0007507 heart development GO:0007507 The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood. GOC:jid UBERON:0000948 The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work. biological_process GO:0007517 muscle organ development GO:0007517 The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work. GOC:jid ISBN:0198506732 The developmental sequence of events leading to the formation of adult skeletal muscle tissue. The main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers. GO:0048637 biological_process myogenesis GO:0007519 skeletal muscle tissue development GO:0007519 The developmental sequence of events leading to the formation of adult skeletal muscle tissue. The main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers. GOC:mtg_muscle A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuromuscular junction. neuromuscular junction organization biological_process NMJ stability neuromuscular junction stability GO:0007528 neuromuscular junction development GO:0007528 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuromuscular junction. GOC:mtg_OBO2OWL_2013 NMJ stability GOC:pr neuromuscular junction stability GOC:pr The establishment of the sex of an organism by physical differentiation. Wikipedia:Sexual_differentiation biological_process GO:0007548 sex differentiation GO:0007548 The establishment of the sex of an organism by physical differentiation. GOC:ai The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth. Wikipedia:Gestation gestation biological_process carrying of young GO:0007565 female pregnancy GO:0007565 The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth. ISBN:0192800825 Attachment of the blastocyst to the uterine lining. blastocyst implantation biological_process GO:0007566 embryo implantation GO:0007566 Attachment of the blastocyst to the uterine lining. GOC:isa_complete PMID:10882512 The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. breathing respiration biological_process GO:0007585 respiratory gaseous exchange by respiratory system GO:0007585 The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. ISBN:0198506732 The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. Reactome:R-HSA-8935690 Wikipedia:Digestion biological_process GO:0007586 digestion GO:0007586 The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. GOC:isa_complete ISBN:0198506732 Reactome:R-HSA-8935690 Digestion The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. Reactome:R-HSA-9709957 Wikipedia:Perception biological_process GO:0007600 sensory perception GO:0007600 The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. GOC:ai GOC:dph Reactome:R-HSA-9709957 Sensory Perception The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image. Wikipedia:Visual_perception sense of sight sensory visual perception vision biological_process GO:0007601 visual perception GO:0007601 The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image. GOC:ai The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound. Reactome:R-HSA-9659379 Wikipedia:Hearing_(sense) hearing perception of sound biological_process GO:0007605 sensory perception of sound GO:0007605 The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound. GOC:ai Reactome:R-HSA-9659379 Sensory processing of sound The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. chemosensory perception biological_process GO:0007606 sensory perception of chemical stimulus GO:0007606 The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. GOC:ai The internally coordinated responses (actions or inactions) of animals (individuals or groups) to internal or external stimuli, via a mechanism that involves nervous system activity. jl 2012-09-20T14:06:08Z GO:0023032 GO:0044708 GO:0044709 Wikipedia:Behavior behavioral response to stimulus behaviour behavioural response to stimulus biological_process single-organism behavior GO:0007610 1. Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation reviews. 2. While a broader definition of behavior encompassing plants and single cell organisms would be justified on the basis of some usage (see PMID:20160973 for discussion), GO uses a tight definition that limits behavior to animals and to responses involving the nervous system, excluding plant responses that GO classifies under development, and responses of unicellular organisms that has general classifications for covering the responses of cells in multicellular organisms (e.g. cell chemotaxis). behavior GO:0007610 The internally coordinated responses (actions or inactions) of animals (individuals or groups) to internal or external stimuli, via a mechanism that involves nervous system activity. GOC:ems GOC:jl ISBN:0395448956 PMID:20160973 The acquisition and processing of information and/or the storage and retrieval of this information over time. biological_process GO:0007611 learning or memory GO:0007611 The acquisition and processing of information and/or the storage and retrieval of this information over time. GOC:jid PMID:8938125 The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task). Wikipedia:Memory biological_process GO:0007613 memory GO:0007613 The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task). GOC:curators ISBN:0582227089 The flow of blood through the body of an animal, enabling the transport of nutrients to the tissues and the removal of waste products. GO:0070261 biological_process hemolymph circulation GO:0008015 blood circulation GO:0008015 The flow of blood through the body of an animal, enabling the transport of nutrients to the tissues and the removal of waste products. GOC:mtg_heart ISBN:0192800825 Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process in which the heart decreases in volume in a characteristic way to propel blood through the body. regulation of cardiac contraction biological_process GO:0008016 regulation of heart contraction GO:0008016 Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process in which the heart decreases in volume in a characteristic way to propel blood through the body. GOC:dph GOC:go_curators GOC:tb The orderly movement of mesodermal cells from one site to another. mesoderm cell migration biological_process GO:0008078 mesodermal cell migration GO:0008078 The orderly movement of mesodermal cells from one site to another. GOC:ascb_2009 GOC:dph GOC:mah GOC:sat GOC:tb PMID:25119047 The directed movement of organelles or molecules along microtubules in neuron projections. Wikipedia:Axoplasmic_transport axon cargo transport axonal transport axoplasmic transport biological_process GO:0008088 axo-dendritic transport GO:0008088 The directed movement of organelles or molecules along microtubules in neuron projections. ISBN:0815316194 The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons. anterograde axon cargo transport biological_process GO:0008089 anterograde axonal transport GO:0008089 The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons. ISBN:0815316194 The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons. retrograde axon cargo transport biological_process GO:0008090 retrograde axonal transport GO:0008090 The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons. ISBN:0815316194 Any process in which a protein is transported to, or maintained in, a specific location. GO:0008105 GO:0016249 GO:0034613 Reactome:R-HSA-9609507 cellular protein localisation cellular protein localization protein localisation channel localizer activity biological_process asymmetric protein localisation asymmetric protein localization establishment and maintenance of asymmetric protein localization establishment and maintenance of protein localization GO:0008104 protein localization GO:0008104 Any process in which a protein is transported to, or maintained in, a specific location. GOC:ai Reactome:R-HSA-9609507 Protein localization cellular protein localisation GOC:mah protein localisation GOC:mah channel localizer activity GOC:mah asymmetric protein localisation GOC:mah A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence. jl 2012-09-19T15:05:24Z GO:0000004 GO:0007582 GO:0044699 Wikipedia:Biological_process biological process physiological process biological_process single organism process single-organism process GO:0008150 Note that, in addition to forming the root of the biological process ontology, this term is recommended for the annotation of gene products whose biological process is unknown. When this term is used for annotation, it indicates that no information was available about the biological process of the gene product annotated as of the date the annotation was made; the evidence code 'no data' (ND), is used to indicate this. biological_process GO:0008150 A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence. GOC:pdt A cellular process consisting of the biochemical pathways by which a living organism transforms chemical substances. This includes including anabolism (biosynthetic process) and catabolism (catabolic process). Metabolic processes includes the transformation of small molecules, as well macromolecular processes such as DNA repair and replication, protein synthesis and degradation. jl 2012-10-17T15:46:40Z GO:0044236 GO:0044710 Reactome:R-HSA-1430728 Wikipedia:Metabolism metabolism biological_process GO:0008152 Note that metabolic processes do not include single functions or processes such as protein-protein interactions, protein-nucleic acids, nor receptor-ligand interactions. metabolic process GO:0008152 A cellular process consisting of the biochemical pathways by which a living organism transforms chemical substances. This includes including anabolism (biosynthetic process) and catabolism (catabolic process). Metabolic processes includes the transformation of small molecules, as well macromolecular processes such as DNA repair and replication, protein synthesis and degradation. GOC:go_curators ISBN:0198547684 Reactome:R-HSA-1430728 Metabolism The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus. Reactome:R-HSA-8957322 Wikipedia:Steroid_metabolism steroid metabolism biological_process GO:0008202 steroid metabolic process GO:0008202 The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus. ISBN:0198547684 Reactome:R-HSA-8957322 Metabolism of steroids Any biological process that results in permanent cessation of all vital functions of a cell. A cell should be considered dead when any one of the following molecular or morphological criteria is met: (1) the cell has lost the integrity of its plasma membrane; (2) the cell, including its nucleus, has undergone complete fragmentation into discrete bodies (frequently referred to as apoptotic bodies). The cell corpse (or its fragments) may be engulfed by an adjacent cell in vivo, but engulfment of whole cells should not be considered a strict criteria to define cell death as, under some circumstances, live engulfed cells can be released from phagosomes (see PMID:18045538). biological_process accidental cell death necrosis GO:0008219 This term should not be used for direct annotation, it is currently kept in GO as a placeholder for describing cell death phenotypes in uPHENO. When information is provided on a programmed cell death mechanism, annotations should be made to the appropriate descendant of 'cell death' (such as, but not limited to, GO:0097300 'programmed necrotic cell death' or GO:0006915 'apoptotic process'). Unintentional cell death, i.e. cell death caused by injury, ageing, or cell phenotypes observed as a result of a pathological mutation in an essential gene should NOT be annotated using GO terms. cell death GO:0008219 Any biological process that results in permanent cessation of all vital functions of a cell. A cell should be considered dead when any one of the following molecular or morphological criteria is met: (1) the cell has lost the integrity of its plasma membrane; (2) the cell, including its nucleus, has undergone complete fragmentation into discrete bodies (frequently referred to as apoptotic bodies). The cell corpse (or its fragments) may be engulfed by an adjacent cell in vivo, but engulfment of whole cells should not be considered a strict criteria to define cell death as, under some circumstances, live engulfed cells can be released from phagosomes (see PMID:18045538). GOC:mah GOC:mtg_apoptosis PMID:25236395 The multiplication or reproduction of cells, resulting in the expansion of a cell population. biological_process cell proliferation GO:0008283 This term was moved out from being a child of 'cellular process' because it is a cell population-level process, and cellular processes are restricted to those processes that involve individual cells. Also note that this term is intended to be used for the proliferation of cells within a multicellular organism, not for the expansion of a population of single-celled organisms. cell population proliferation GO:0008283 The multiplication or reproduction of cells, resulting in the expansion of a cell population. GOC:mah GOC:mb Any process that activates or increases the rate or extent of cell proliferation. up regulation of cell proliferation up-regulation of cell proliferation upregulation of cell proliferation activation of cell proliferation stimulation of cell proliferation biological_process positive regulation of cell proliferation GO:0008284 positive regulation of cell population proliferation GO:0008284 Any process that activates or increases the rate or extent of cell proliferation. GOC:go_curators Any process that stops, prevents or reduces the rate or extent of cell proliferation. down regulation of cell proliferation down-regulation of cell proliferation downregulation of cell proliferation inhibition of cell proliferation biological_process negative regulation of cell proliferation GO:0008285 negative regulation of cell population proliferation GO:0008285 Any process that stops, prevents or reduces the rate or extent of cell proliferation. GOC:go_curators The chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues. acetylcholine metabolism biological_process GO:0008291 acetylcholine metabolic process GO:0008291 The chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues. GOC:jl GOC:nln ISBN:0192800752 The chemical reactions and pathways resulting in the formation of acetylcholine, the acetic acid ester of the organic base choline. acetylcholine anabolism acetylcholine biosynthesis acetylcholine formation acetylcholine synthesis biological_process GO:0008292 acetylcholine biosynthetic process GO:0008292 The chemical reactions and pathways resulting in the formation of acetylcholine, the acetic acid ester of the organic base choline. GOC:jl ISBN:0192800752 The orderly movement of a glial cell, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system. GO:0043359 glia cell migration biological_process GO:0008347 glial cell migration GO:0008347 The orderly movement of a glial cell, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system. GOC:jl GOC:mtg_sensu The orderly movement of a cell specialized to produce haploid gametes through the embryo from its site of production to the place where the gonads will form. germ-cell migration pole cell migration biological_process primordial germ cell migration GO:0008354 germ cell migration GO:0008354 The orderly movement of a cell specialized to produce haploid gametes through the embryo from its site of production to the place where the gonads will form. GOC:bf GOC:jl The asymmetric division of cells to produce two daughter cells with different developmental potentials. It is of fundamental significance for the generation of cell diversity. Wikipedia:Asymmetric_cell_division asymmetrical cell division biological_process asymmetric cytokinesis asymmetrical cytokinesis GO:0008356 asymmetric cell division GO:0008356 The asymmetric division of cells to produce two daughter cells with different developmental potentials. It is of fundamental significance for the generation of cell diversity. PMID:11672519 Any process in which the axon of a neuron is insulated, and that insulation maintained, thereby preventing dispersion of the electrical signal. GO:0042553 cellular axon ensheathment biological_process cellular nerve ensheathment nerve ensheathment GO:0008366 axon ensheathment GO:0008366 Any process in which the axon of a neuron is insulated, and that insulation maintained, thereby preventing dispersion of the electrical signal. GOC:jl ISBN:0878932437 The process whose specific outcome is the progression of the gonad over time, from its formation to the mature structure. The gonad is an animal organ that produces gametes; in some species it also produces hormones. gonadogenesis biological_process GO:0008406 gonad development GO:0008406 The process whose specific outcome is the progression of the gonad over time, from its formation to the mature structure. The gonad is an animal organ that produces gametes; in some species it also produces hormones. GOC:ems ISBN:0198506732 gonadogenesis GOC:cjm The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species. biological_process hypodermis development GO:0008544 epidermis development GO:0008544 The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species. GOC:go_curators UBERON:0001003 hypodermis development GOC:kmv GOC:rk The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure. GO:0061039 biological_process ovarian development ovary development GO:0008585 female gonad development GO:0008585 The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure. GOC:dph GOC:jid GOC:tb ovarian development GOC:sl ovary development GOC:sl The process in which the structures of a photoreceptor cell are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a photoreceptor cell, a sensory cell that reacts to the presence of light. An example of this is found in Drosophila melanogaster. biological_process photoreceptor development GO:0008594 photoreceptor cell morphogenesis GO:0008594 The process in which the structures of a photoreceptor cell are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a photoreceptor cell, a sensory cell that reacts to the presence of light. An example of this is found in Drosophila melanogaster. GOC:jid GOC:mah The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. lipid anabolism lipid biosynthesis lipid formation lipid synthesis lipogenesis biological_process GO:0008610 lipid biosynthetic process GO:0008610 The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. GOC:go_curators lipogenesis GOC:sl The directed movement of carbohydrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carbohydrates are a group of organic compounds based of the general formula Cx(H2O)y. GO:0006861 GO:0008644 sugar transport biological_process GO:0008643 carbohydrate transport GO:0008643 The directed movement of carbohydrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carbohydrates are a group of organic compounds based of the general formula Cx(H2O)y. GOC:ai The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents. Wikipedia:Amino_acid_synthesis amino acid anabolism amino acid biosynthesis amino acid formation amino acid synthesis cellular amino acid biosynthetic process biological_process GO:0008652 amino acid biosynthetic process GO:0008652 The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents. ISBN:0198506732 A cellular process consisting of the biochemical pathways by which a living organism synthesizes chemical substances. This typically represents the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. jl 2012-10-17T15:52:18Z GO:0044274 GO:0044711 formation Wikipedia:Anabolism anabolism biosynthesis synthesis multicellular organismal biosynthetic process biological_process single-organism biosynthetic process GO:0009058 biosynthetic process GO:0009058 A cellular process consisting of the biochemical pathways by which a living organism synthesizes chemical substances. This typically represents the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. GOC:curators ISBN:0198547684 The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. GO:0043284 biopolymer biosynthetic process macromolecule anabolism macromolecule biosynthesis macromolecule formation macromolecule synthesis biological_process GO:0009059 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. macromolecule biosynthetic process GO:0009059 The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. GOC:mah biopolymer biosynthetic process GOC:mtg_chebi_dec09 The chemical reactions and pathways involving glycoproteins, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide. glycoprotein metabolism biological_process GO:0009100 glycoprotein metabolic process GO:0009100 The chemical reactions and pathways involving glycoproteins, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide. GOC:go_curators ISBN:0198506732 The chemical reactions and pathways resulting in the formation of glycoproteins, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide. glycoprotein anabolism glycoprotein biosynthesis glycoprotein formation glycoprotein synthesis biological_process GO:0009101 glycoprotein biosynthetic process GO:0009101 The chemical reactions and pathways resulting in the formation of glycoproteins, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide. GOC:go_curators ISBN:0198506732 The chemical reactions and pathways involving a nucleobase, a nitrogenous base that is a constituent of a nucleic acid, e.g. the purines: adenine, guanine, hypoxanthine, xanthine and the pyrimidines: cytosine, uracil, thymine. nucleobase metabolism biological_process GO:0009112 nucleobase metabolic process GO:0009112 The chemical reactions and pathways involving a nucleobase, a nitrogenous base that is a constituent of a nucleic acid, e.g. the purines: adenine, guanine, hypoxanthine, xanthine and the pyrimidines: cytosine, uracil, thymine. GOC:ma The controlled release of proteins from a cell. GO:0045166 GO:0045731 glycoprotein secretion protein secretion during cell fate commitment protein secretion resulting in cell fate commitment biological_process GO:0009306 protein secretion GO:0009306 The controlled release of proteins from a cell. GOC:ai The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom. jl 2009-07-15T11:55:44Z GO:0044106 amine metabolism cellular amine metabolic process biological_process GO:0009308 amine metabolic process GO:0009308 The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom. GOC:jl ISBN:0198506732 The chemical reactions and pathways resulting in the formation of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom. amine anabolism amine biosynthesis amine formation amine synthesis biological_process GO:0009309 amine biosynthetic process GO:0009309 The chemical reactions and pathways resulting in the formation of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom. GOC:jl ISBN:0198506732 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation. response to electromagnetic radiation stimulus response to radiation stimulus biological_process GO:0009314 Note that 'radiation' refers to electromagnetic radiation of any wavelength. response to radiation GO:0009314 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation. GOC:jl Wikipedia:Electromagnetic_radiation Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light. biological_process GO:0009416 response to light stimulus GO:0009416 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light. GOC:go_curators ISBN:0582227089 The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy). Wikipedia:Fertilisation syngamy biological_process GO:0009566 fertilization GO:0009566 The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy). GOC:tb ISBN:0198506732 The series of events in which an external stimulus is received by a cell and converted into a molecular signal. biological_process perception of external stimulus GO:0009581 detection of external stimulus GO:0009581 The series of events in which an external stimulus is received by a cell and converted into a molecular signal. GOC:hb The series of events in which an (non-living) abiotic stimulus is received by a cell and converted into a molecular signal. biological_process perception of abiotic stimulus GO:0009582 detection of abiotic stimulus GO:0009582 The series of events in which an (non-living) abiotic stimulus is received by a cell and converted into a molecular signal. GOC:hb The series of events in which a light stimulus (in the form of photons) is received and converted into a molecular signal. detection of light biological_process perception of light GO:0009583 detection of light stimulus GO:0009583 The series of events in which a light stimulus (in the form of photons) is received and converted into a molecular signal. GOC:go_curators The series of events in which a visible light stimulus is received by a cell and converted into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm. biological_process perception of visible light GO:0009584 detection of visible light GO:0009584 The series of events in which a visible light stimulus is received by a cell and converted into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm. GOC:go_curators ISBN:0198506732 The series of events in which a chemical stimulus is received by a cell and converted into a molecular signal. chemoperception detection of chemical substance biological_process chemoreception perception of chemical stimulus perception of chemical substance GO:0009593 detection of chemical stimulus GO:0009593 The series of events in which a chemical stimulus is received by a cell and converted into a molecular signal. GOC:jl Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus. response to environmental stimulus biological_process GO:0009605 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. response to external stimulus GO:0009605 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus. GOC:hb Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism. response to biotic stress biological_process GO:0009607 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. response to biotic stimulus GO:0009607 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism. GOC:hb Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abiotic (not derived from living organisms) stimulus. response to abiotic stress biological_process GO:0009628 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. response to abiotic stimulus GO:0009628 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abiotic (not derived from living organisms) stimulus. GOC:hb Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxic stimulus. detoxification response biological_process toxin resistance toxin susceptibility/resistance GO:0009636 response to toxic substance GO:0009636 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxic stimulus. GOC:lr The process in which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form. embryogenesis and morphogenesis Wikipedia:Morphogenesis anatomical structure organization morphogenesis biological_process GO:0009653 anatomical structure morphogenesis GO:0009653 The process in which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form. GOC:go_curators ISBN:0521436125 The chemical reactions and pathways involving a compound containing a pyrocatechol (1,2-benzenediol) nucleus or substituent. biological_process catechol metabolic process catechol metabolism GO:0009712 catechol-containing compound metabolic process GO:0009712 The chemical reactions and pathways involving a compound containing a pyrocatechol (1,2-benzenediol) nucleus or substituent. GOC:sm ISBN:0198547684 The chemical reactions and pathways resulting in the formation of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent. biological_process catechol anabolism catechol biosynthesis catechol biosynthetic process catechol formation catechol synthesis GO:0009713 catechol-containing compound biosynthetic process GO:0009713 The chemical reactions and pathways resulting in the formation of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent. GOC:go_curators Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus arising within the organism. biological_process GO:0009719 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. response to endogenous stimulus GO:0009719 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus arising within the organism. GOC:sm Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus. response to hormone stimulus biological_process growth regulator GO:0009725 response to hormone GO:0009725 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus. GOC:jl response to hormone stimulus GOC:dos Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbohydrate stimulus. response to carbohydrate stimulus biological_process GO:0009743 response to carbohydrate GO:0009743 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbohydrate stimulus. GOC:jl response to carbohydrate stimulus GOC:dos Any process that modulates the frequency, rate or extent of asymmetric cell division. biological_process GO:0009786 regulation of asymmetric cell division GO:0009786 Any process that modulates the frequency, rate or extent of asymmetric cell division. GOC:lr The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant. GO:0009795 embryogenesis and morphogenesis Reactome:R-HSA-5619507 Wikipedia:Embryogenesis embryogenesis embryonal development biological_process GO:0009790 embryo development GO:0009790 The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant. GOC:go_curators GOC:isa_complete GOC:mtg_sensu Reactome:R-HSA-5619507 Activation of HOX genes during differentiation The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development. biological_process GO:0009791 post-embryonic development GO:0009791 The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development. GOC:go_curators The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell. embryogenesis biological_process GO:0009792 embryo development ending in birth or egg hatching GO:0009792 The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell. GOC:go_curators GOC:isa_complete GOC:mtg_sensu The chemical reactions and pathways involving alkaloids, nitrogen containing natural products which are not otherwise classified as peptides, nonprotein amino acids, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones or primary metabolites (such as purine or pyrimidine bases). alkaloid metabolism biological_process GO:0009820 alkaloid metabolic process GO:0009820 The chemical reactions and pathways involving alkaloids, nitrogen containing natural products which are not otherwise classified as peptides, nonprotein amino acids, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones or primary metabolites (such as purine or pyrimidine bases). GOC:lr ISBN:0122146743 The chemical reactions and pathways resulting in the formation of alkaloids, nitrogen-containing natural products which are not otherwise classified as nonprotein amino acids, amines, peptides, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones, or primary metabolite (such as purine or pyrimidine bases). alkaloid anabolism alkaloid biosynthesis alkaloid formation alkaloid synthesis biological_process GO:0009821 alkaloid biosynthetic process GO:0009821 The chemical reactions and pathways resulting in the formation of alkaloids, nitrogen-containing natural products which are not otherwise classified as nonprotein amino acids, amines, peptides, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones, or primary metabolite (such as purine or pyrimidine bases). GOC:lr ISBN:0122146743 The process that results in the patterns of cell differentiation that will arise in an embryo. embryonic pattern biosynthesis embryonic pattern formation biological_process ventral/lateral system GO:0009880 embryonic pattern specification GO:0009880 The process that results in the patterns of cell differentiation that will arise in an embryo. GOC:go_curators ISBN:0521436125 Morphogenesis of an animal organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. histogenesis and organogenesis biological_process GO:0009887 animal organ morphogenesis GO:0009887 Morphogenesis of an animal organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. GOC:dgh GOC:go_curators ISBN:0471245208 ISBN:0721662544 The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure. histogenesis and organogenesis Wikipedia:Histogenesis histogenesis biological_process GO:0009888 tissue development GO:0009888 The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure. ISBN:0471245208 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances. regulation of anabolism regulation of biosynthesis regulation of formation regulation of synthesis biological_process GO:0009889 regulation of biosynthetic process GO:0009889 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances. GOC:go_curators Any process that stops, prevents, or reduces the rate of the chemical reactions and pathways resulting in the formation of substances. down regulation of biosynthetic process down-regulation of biosynthetic process downregulation of biosynthetic process negative regulation of anabolism negative regulation of biosynthesis negative regulation of formation negative regulation of synthesis inhibition of biosynthetic process biological_process GO:0009890 negative regulation of biosynthetic process GO:0009890 Any process that stops, prevents, or reduces the rate of the chemical reactions and pathways resulting in the formation of substances. GOC:go_curators Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances. positive regulation of anabolism positive regulation of biosynthesis positive regulation of formation positive regulation of synthesis up regulation of biosynthetic process up-regulation of biosynthetic process upregulation of biosynthetic process activation of biosynthetic process stimulation of biosynthetic process biological_process GO:0009891 positive regulation of biosynthetic process GO:0009891 Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism. GO:0044252 down regulation of metabolic process down-regulation of metabolic process downregulation of metabolic process negative regulation of metabolism negative regulation of organismal metabolism inhibition of metabolic process inhibition of organismal metabolic process negative regulation of multicellular organismal metabolic process biological_process GO:0009892 negative regulation of metabolic process GO:0009892 Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism. GOC:go_curators Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism. GO:0044253 positive regulation of metabolism up regulation of metabolic process up-regulation of metabolic process upregulation of metabolic process activation of metabolic process positive regulation of multicellular organismal metabolic process positive regulation of organismal metabolism stimulation of metabolic process stimulation of organismal metabolic process up-regulation of organismal metabolic process biological_process GO:0009893 positive regulation of metabolic process GO:0009893 Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism. GOC:go_curators The process in which a relatively unspecialized cell acquires specialized features of an epidermal cell, any of the cells making up the epidermis. GO:0043355 biological_process hypodermal cell differentiation GO:0009913 epidermal cell differentiation GO:0009913 The process in which a relatively unspecialized cell acquires specialized features of an epidermal cell, any of the cells making up the epidermis. GOC:dph GOC:go_curators GOC:mtg_sensu GOC:sdb_2009 GOC:tb hypodermal cell differentiation GOC:kmv GOC:rk The directed movement of hormones into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process GO:0009914 hormone transport GO:0009914 The directed movement of hormones into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:tb The regionalization process in which specific areas of cell differentiation are determined along the anterior-posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism. biological_process anterior/posterior pattern formation GO:0009952 anterior/posterior pattern specification GO:0009952 The regionalization process in which specific areas of cell differentiation are determined along the anterior-posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism. GOC:dph GOC:go_curators GOC:isa_complete GOC:tb Any process that modulates the frequency, rate or extent of signal transduction. GO:0035466 biological_process regulation of signaling pathway regulation of signalling pathway GO:0009966 regulation of signal transduction GO:0009966 Any process that modulates the frequency, rate or extent of signal transduction. GOC:sm regulation of signalling pathway GOC:mah Any process that activates or increases the frequency, rate or extent of signal transduction. GO:0035468 up regulation of signal transduction up-regulation of signal transduction upregulation of signal transduction activation of signal transduction stimulation of signal transduction biological_process positive regulation of signaling pathway positive regulation of signalling pathway GO:0009967 positive regulation of signal transduction GO:0009967 Any process that activates or increases the frequency, rate or extent of signal transduction. GOC:sm positive regulation of signalling pathway GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction. GO:0035467 Reactome:R-HSA-8849472 down regulation of signal transduction down-regulation of signal transduction downregulation of signal transduction inhibition of signal transduction biological_process negative regulation of signaling pathway negative regulation of signalling pathway GO:0009968 negative regulation of signal transduction GO:0009968 Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction. GOC:sm Reactome:R-HSA-8849472 PTK6 Down-Regulation negative regulation of signalling pathway GOC:mah Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level. jl 2012-12-11T16:56:55Z GO:0008151 GO:0044763 GO:0050875 cell physiology cellular physiological process cell growth and/or maintenance biological_process single-organism cellular process GO:0009987 This term should not be used for direct annotation. It should be possible to make a more specific annotation to one of the children of this term. cellular process GO:0009987 Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level. GOC:go_curators GOC:isa_complete The process in which a relatively unspecialized immature germ cell acquires the specialized features of a mature female gamete. oocyte cell differentiation biological_process GO:0009994 oocyte differentiation GO:0009994 The process in which a relatively unspecialized immature germ cell acquires the specialized features of a mature female gamete. GOC:go_curators GOC:mtg_sensu The process in which a relatively unspecialized cell acquires the specialized features of a glial cell. GO:0007404 GO:0043360 glia cell differentiation neuroglia differentiation biological_process GO:0010001 glial cell differentiation GO:0010001 The process in which a relatively unspecialized cell acquires the specialized features of a glial cell. GOC:go_curators GOC:mtg_sensu The process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. cardiac precursor cell differentiation cardioblast cell differentiation biological_process cardiomyocyte generation GO:0010002 cardioblast differentiation GO:0010002 The process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. GOC:go_curators cardiac precursor cell differentiation GOC:mtg_heart Compaction of chromatin structure prior to meiosis in eukaryotic cells. chromosome condensation involved in meiotic cell cycle biological_process GO:0010032 meiotic chromosome condensation GO:0010032 Compaction of chromatin structure prior to meiosis in eukaryotic cells. PMID:10072401 chromosome condensation involved in meiotic cell cycle GOC:dph GOC:tb Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetate stimulus. biological_process GO:0010034 response to acetate GO:0010034 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetate stimulus. GOC:sm The division of the zygote into two daughter cells that will adopt developmentally distinct potentials. biological_process zygote asymmetric cytokinesis GO:0010070 zygote asymmetric cell division GO:0010070 The division of the zygote into two daughter cells that will adopt developmentally distinct potentials. GOC:tb The regionalization process that specifies animal organ primordium boundaries resulting in a restriction of organogenesis to a limited spatial domain and keeping the organ separate from surrounding tissues. GO:0048862 organ boundary specification biological_process GO:0010160 formation of animal organ boundary GO:0010160 The regionalization process that specifies animal organ primordium boundaries resulting in a restriction of organogenesis to a limited spatial domain and keeping the organ separate from surrounding tissues. GOC:dph GOC:isa_complete PMID:9611175 The process in which the anatomical structures of the soma are generated and organized. biological_process GO:0010171 body morphogenesis GO:0010171 The process in which the anatomical structures of the soma are generated and organized. GOC:ems ISBN:0140512888 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endomembrane system. endomembrane organization endomembrane system organisation biological_process GO:0010256 endomembrane system organization GO:0010256 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endomembrane system. GOC:mah GOC:sm endomembrane system organisation GOC:mah Any process that modulates the frequency, rate or extent of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field. biological_process GO:0010453 regulation of cell fate commitment GO:0010453 Any process that modulates the frequency, rate or extent of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field. GOC:dph GOC:tb Any process that stops, prevents or reduces the frequency or rate of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field. biological_process GO:0010454 negative regulation of cell fate commitment GO:0010454 Any process that stops, prevents or reduces the frequency or rate of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field. GOC:dph GOC:tb Any process that activates, maintains or increases the frequency or rate of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field. biological_process GO:0010455 positive regulation of cell fate commitment GO:0010455 Any process that activates, maintains or increases the frequency or rate of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field. GOC:dph GOC:tb The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets. biological_process GO:0010463 mesenchymal cell proliferation GO:0010463 The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets. GOC:dph GOC:tb Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets. biological_process GO:0010464 regulation of mesenchymal cell proliferation GO:0010464 Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets. GOC:dph GOC:tb The process in which a gene's sequence is converted into a mature gene product (protein or RNA). This includes the production of an RNA transcript and its processing, as well as translation and maturation for protein-coding genes. Wikipedia:Gene_expression biological_process GO:0010467 gene expression GO:0010467 The process in which a gene's sequence is converted into a mature gene product (protein or RNA). This includes the production of an RNA transcript and its processing, as well as translation and maturation for protein-coding genes. GOC:txnOH-2018 PMID:25934543 PMID:31580950 Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). Reactome:R-HSA-163767 Reactome:R-HSA-9752946 Wikipedia:Regulation_of_gene_expression regulation of protein expression biological_process gene regulation regulation of gene product expression GO:0010468 This class covers any process that regulates the rate of production of a mature gene product, and so includes processes that regulate that rate by regulating the level, stability or availability of intermediates in the process of gene expression. For example, it covers any process that regulates the level, stability or availability of mRNA or circRNA for translation and thereby regulates the rate of production of the encoded protein via translation. regulation of gene expression GO:0010468 Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). GOC:txnOH-2018 Reactome:R-HSA-163767 PP2A-mediated dephosphorylation of key metabolic factors Reactome:R-HSA-9752946 Expression and translocation of olfactory receptors gene regulation GOC:cjm Any process that modulates the rate or extent of gastrulation. Gastrulation is the complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. biological_process GO:0010470 regulation of gastrulation GO:0010470 Any process that modulates the rate or extent of gastrulation. Gastrulation is the complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. GOC:dph GOC:tb Any process resulting in the physical partitioning and separation of an epidermal cell, any of the cells making up the epidermis, into daughter cells. biological_process hypodermal cell division GO:0010481 epidermal cell division GO:0010481 Any process resulting in the physical partitioning and separation of an epidermal cell, any of the cells making up the epidermis, into daughter cells. PMID:17450124 hypodermal cell division GOC:kmv GOC:rk Any process that modulates the frequency, rate or extent of the physical partitioning and separation of an epidermal cell into daughter cells. An epidermal cell is any of the cells that make up the epidermis. biological_process regulation of hypodermal cell division GO:0010482 regulation of epidermal cell division GO:0010482 Any process that modulates the frequency, rate or extent of the physical partitioning and separation of an epidermal cell into daughter cells. An epidermal cell is any of the cells that make up the epidermis. PMID:17450124 regulation of hypodermal cell division GOC:kmv GOC:rk The movement of substances between cells. jl 2013-12-19T13:24:56Z GO:1902585 biological_process single organism intercellular transport single-organism intercellular transport GO:0010496 intercellular transport GO:0010496 The movement of substances between cells. GOC:dhl single organism intercellular transport GOC:TermGenie Any process that modulates the frequency, rate or extent of membrane disassembly. biological_process GO:0010549 regulation of membrane disassembly GO:0010549 Any process that modulates the frequency, rate or extent of membrane disassembly. GOC:dph GOC:tb Any process that modulates the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. biological_process GO:0010556 regulation of macromolecule biosynthetic process GO:0010556 Any process that modulates the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. GOC:dph GOC:tb Any process that increases the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. biological_process GO:0010557 positive regulation of macromolecule biosynthetic process GO:0010557 Any process that increases the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. GOC:dph GOC:tb Any process that decreases the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. biological_process GO:0010558 negative regulation of macromolecule biosynthetic process GO:0010558 Any process that decreases the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. GOC:dph GOC:tb Any process that modulates the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide. biological_process GO:0010559 regulation of glycoprotein biosynthetic process GO:0010559 Any process that modulates the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide. GOC:dph GOC:tb Any process that increases the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide. biological_process GO:0010560 positive regulation of glycoprotein biosynthetic process GO:0010560 Any process that increases the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide. GOC:dph GOC:tb Any process that decreases the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide. biological_process GO:0010561 negative regulation of glycoprotein biosynthetic process GO:0010561 Any process that decreases the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide. GOC:dph GOC:tb Any process that modulates a cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. biological_process GO:0010564 regulation of cell cycle process GO:0010564 Any process that modulates a cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. GOC:dph GOC:tb Any process that modulates the rate, frequency, or extent of the orderly movement of an endothelial cell into the extracellular matrix to form an endothelium. biological_process GO:0010594 regulation of endothelial cell migration GO:0010594 Any process that modulates the rate, frequency, or extent of the orderly movement of an endothelial cell into the extracellular matrix to form an endothelium. GOC:BHF GOC:dph GOC:tb Any process that increases the rate, frequency, or extent of the orderly movement of an endothelial cell into the extracellular matrix to form an endothelium. biological_process GO:0010595 positive regulation of endothelial cell migration GO:0010595 Any process that increases the rate, frequency, or extent of the orderly movement of an endothelial cell into the extracellular matrix to form an endothelium. GOC:BHF GOC:dph GOC:tb Any process that decreases the rate, frequency, or extent of the orderly movement of an endothelial cell into the extracellular matrix to form an endothelium. biological_process GO:0010596 negative regulation of endothelial cell migration GO:0010596 Any process that decreases the rate, frequency, or extent of the orderly movement of an endothelial cell into the extracellular matrix to form an endothelium. GOC:BHF GOC:dph GOC:tb Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. biological_process GO:0010604 positive regulation of macromolecule metabolic process GO:0010604 Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. GOC:dph GOC:tb Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. biological_process GO:0010605 negative regulation of macromolecule metabolic process GO:0010605 Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. GOC:dph GOC:tb Any process that modulates the frequency, rate or extent of gene expression after the production of an RNA transcript. posttranscriptional regulation of gene expression biological_process GO:0010608 post-transcriptional regulation of gene expression GO:0010608 Any process that modulates the frequency, rate or extent of gene expression after the production of an RNA transcript. GOC:dph GOC:tb Any process that modulates the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division. biological_process GO:0010611 regulation of cardiac muscle hypertrophy GO:0010611 Any process that modulates the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division. GOC:dph GOC:tb Any process that modulates the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. biological_process GO:0010612 regulation of cardiac muscle adaptation GO:0010612 Any process that modulates the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. GOC:dph GOC:tb Any process that increases the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division. biological_process GO:0010613 positive regulation of cardiac muscle hypertrophy GO:0010613 Any process that increases the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division. GOC:BHF GOC:dph GOC:tb Any process that decreases the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division. biological_process GO:0010614 negative regulation of cardiac muscle hypertrophy GO:0010614 Any process that decreases the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division. GOC:BHF GOC:dph GOC:tb Any process that increases the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. biological_process GO:0010615 positive regulation of cardiac muscle adaptation GO:0010615 Any process that increases the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. GOC:BHF GOC:dph GOC:tb Any process that decreases the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. biological_process GO:0010616 negative regulation of cardiac muscle adaptation GO:0010616 Any process that decreases the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. GOC:BHF GOC:dph GOC:tb The activation of endogenous cellular processes that result in the death of a cell as part of its development. developmental programmed cell death programmed cell death involved in development biological_process GO:0010623 This process is part of the natural developmental program of some cell types, but it does not always happen as part of the development or shaping of a gross anatomical structure. programmed cell death involved in cell development GO:0010623 The activation of endogenous cellular processes that result in the death of a cell as part of its development. GOC:dph GOC:mtg_apoptosis GOC:tb Any process that modulates the frequency or rate of multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system. biological_process GO:0010624 regulation of Schwann cell proliferation GO:0010624 Any process that modulates the frequency or rate of multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system. GOC:dph GOC:sl GOC:tb Any process that increases the frequency or rate of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system. biological_process GO:0010625 positive regulation of Schwann cell proliferation GO:0010625 Any process that increases the frequency or rate of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system. GOC:dph GOC:sl GOC:tb Any process that decreases the frequency or extent of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system. biological_process GO:0010626 negative regulation of Schwann cell proliferation GO:0010626 Any process that decreases the frequency or extent of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system. GOC:dph GOC:sl GOC:tb Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). biological_process GO:0010628 positive regulation of gene expression GO:0010628 Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). GOC:txnOH-2018 Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). biological_process gene silencing GO:0010629 This term covers any process that negatively regulates the rate of production of a mature gene product, and so includes processes that negatively regulate that rate by reducing the level, stability or availability of intermediates in the process of gene expression. For example, it covers any process that reduces the level, stability or availability of mRNA or circRNA for translation and thereby reduces the rate of production of the encoded protein via translation. negative regulation of gene expression GO:0010629 Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). GOC:txnOH-2018 The orderly movement of an epithelial cell from one site to another, often during the development of a multicellular organism. biological_process GO:0010631 epithelial cell migration GO:0010631 The orderly movement of an epithelial cell from one site to another, often during the development of a multicellular organism. GOC:BHF GOC:ascb_2009 GOC:dph GOC:tb Any process that modulates the frequency, rate or extent of epithelial cell migration. biological_process GO:0010632 regulation of epithelial cell migration GO:0010632 Any process that modulates the frequency, rate or extent of epithelial cell migration. GOC:BHF GOC:dph GOC:tb Any process that stops, prevents, or reduces the frequency, rate or extent of epithelial cell migration. biological_process GO:0010633 negative regulation of epithelial cell migration GO:0010633 Any process that stops, prevents, or reduces the frequency, rate or extent of epithelial cell migration. GOC:BHF GOC:dph GOC:tb Any process that activates or increases the frequency, rate or extent of epithelial cell migration. biological_process GO:0010634 positive regulation of epithelial cell migration GO:0010634 Any process that activates or increases the frequency, rate or extent of epithelial cell migration. GOC:BHF GOC:dph GOC:tb Any process that increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle. positive regulation of organelle organisation biological_process positive regulation of organelle organization and biogenesis GO:0010638 positive regulation of organelle organization GO:0010638 Any process that increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle. GOC:dph GOC:tb positive regulation of organelle organisation GOC:mah positive regulation of organelle organization and biogenesis GOC:mah Any process that decreases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle. negative regulation of organelle organisation biological_process negative regulation of organelle organization and biogenesis GO:0010639 negative regulation of organelle organization GO:0010639 Any process that decreases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle. GOC:dph GOC:tb negative regulation of organelle organisation GOC:mah negative regulation of organelle organization and biogenesis GOC:mah Any process that modulates the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. biological_process GO:0010646 regulation of cell communication GO:0010646 Any process that modulates the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. GOC:dph GOC:tb Any process that increases the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. biological_process GO:0010647 positive regulation of cell communication GO:0010647 Any process that increases the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. GOC:dph GOC:tb Any process that decreases the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. biological_process GO:0010648 negative regulation of cell communication GO:0010648 Any process that decreases the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. GOC:dph GOC:tb Any process that decreases the rate or frequency of muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a muscle cell and result in its death. negative regulation of muscle cell apoptosis biological_process GO:0010656 negative regulation of muscle cell apoptotic process GO:0010656 Any process that decreases the rate or frequency of muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a muscle cell and result in its death. GOC:dph GOC:mtg_apoptosis GOC:tb A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a muscle cell and result in its death. A muscle cell is a mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle. muscle cell apoptosis biological_process GO:0010657 muscle cell apoptotic process GO:0010657 A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a muscle cell and result in its death. A muscle cell is a mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle. CL:0000187 GOC:dph GOC:mtg_apoptosis GOC:tb A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a striated muscle cell and result in its death. Striated muscle cells make up striated muscle fibers which are divided by transverse bands into striations. striated muscle cell apoptosis biological_process GO:0010658 striated muscle cell apoptotic process GO:0010658 A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a striated muscle cell and result in its death. Striated muscle cells make up striated muscle fibers which are divided by transverse bands into striations. CL:0000737 GOC:dph GOC:mtg_apoptosis GOC:tb A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a cardiac muscle cell and result in its death. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. cardiac muscle cell apoptosis biological_process GO:0010659 cardiac muscle cell apoptotic process GO:0010659 A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a cardiac muscle cell and result in its death. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. CL:0000746 GOC:dph GOC:mtg_apoptosis GOC:tb Any process that modulates the rate or frequency of muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a muscle cell and result in its death. regulation of muscle cell apoptosis biological_process GO:0010660 regulation of muscle cell apoptotic process GO:0010660 Any process that modulates the rate or frequency of muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a muscle cell and result in its death. GOC:dph GOC:mtg_apoptosis GOC:tb Any process that increases the rate or frequency of muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a muscle cell and result in its death. positive regulation of muscle cell apoptosis biological_process GO:0010661 positive regulation of muscle cell apoptotic process GO:0010661 Any process that increases the rate or frequency of muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a muscle cell and result in its death. GOC:dph GOC:mtg_apoptosis GOC:tb Any process that modulates the rate or extent of striated muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a striated muscle cell and result in its death. regulation of striated muscle cell apoptosis biological_process GO:0010662 regulation of striated muscle cell apoptotic process GO:0010662 Any process that modulates the rate or extent of striated muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a striated muscle cell and result in its death. GOC:dph GOC:mtg_apoptosis GOC:tb Any process that increases the rate or extent of striated muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a striated muscle cell and result in its death. positive regulation of striated muscle cell apoptosis biological_process GO:0010663 positive regulation of striated muscle cell apoptotic process GO:0010663 Any process that increases the rate or extent of striated muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a striated muscle cell and result in its death. GOC:dph GOC:mtg_apoptosis GOC:tb Any process that decreases the rate or extent of striated muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a striated muscle cell and result in its death. down regulation of striated muscle cell apoptosis down-regulation of striated muscle cell apoptosis downregulation of striated muscle cell apoptosis inhibition of striated muscle cell apoptosis negative regulation of striated muscle cell apoptosis biological_process GO:0010664 negative regulation of striated muscle cell apoptotic process GO:0010664 Any process that decreases the rate or extent of striated muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a striated muscle cell and result in its death. GOC:BHF GOC:dph GOC:mtg_apoptosis GOC:rl GOC:tb down regulation of striated muscle cell apoptosis GOC:dph GOC:rl GOC:tb down-regulation of striated muscle cell apoptosis GOC:dph GOC:rl GOC:tb downregulation of striated muscle cell apoptosis GOC:dph GOC:rl GOC:tb inhibition of striated muscle cell apoptosis GOC:dph GOC:rl GOC:tb Any process that modulates the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death. regulation of cardiac muscle cell apoptosis biological_process GO:0010665 regulation of cardiac muscle cell apoptotic process GO:0010665 Any process that modulates the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death. GOC:dph GOC:mtg_apoptosis GOC:tb Any process that increases the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death. positive regulation of cardiac muscle cell apoptosis biological_process GO:0010666 positive regulation of cardiac muscle cell apoptotic process GO:0010666 Any process that increases the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death. GOC:dph GOC:mtg_apoptosis GOC:tb Any process that decreases the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death. down regulation of cardiac muscle cell apoptosis down-regulation of cardiac muscle cell apoptosis downregulation of cardiac muscle cell apoptosis inhibition of cardiac muscle cell apoptosis negative regulation of cardiac muscle cell apoptosis biological_process GO:0010667 negative regulation of cardiac muscle cell apoptotic process GO:0010667 Any process that decreases the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death. GOC:BHF GOC:dph GOC:mtg_apoptosis GOC:rl GOC:tb down regulation of cardiac muscle cell apoptosis GOC:dph GOC:rl GOC:tb down-regulation of cardiac muscle cell apoptosis GOC:dph GOC:rl GOC:tb downregulation of cardiac muscle cell apoptosis GOC:dph GOC:rl GOC:tb inhibition of cardiac muscle cell apoptosis GOC:dph GOC:rl GOC:tb The process in which relatively unspecialized cells acquire specialized structural and/or functional features of an ectodermal cell. Differentiation includes the processes involved in commitment of a cell to a specific fate. biological_process GO:0010668 ectodermal cell differentiation GO:0010668 The process in which relatively unspecialized cells acquire specialized structural and/or functional features of an ectodermal cell. Differentiation includes the processes involved in commitment of a cell to a specific fate. GOC:dph GOC:tb Any process that decreases the frequency, rate or extent of the regulated release of norepinephrine. biological_process GO:0010700 negative regulation of norepinephrine secretion GO:0010700 Any process that decreases the frequency, rate or extent of the regulated release of norepinephrine. GOC:dph GOC:tb Any process that increases the frequency, rate or extent of the regulated release of norepinephrine. biological_process GO:0010701 positive regulation of norepinephrine secretion GO:0010701 Any process that increases the frequency, rate or extent of the regulated release of norepinephrine. GOC:dph GOC:tb Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the metabolism of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. regulation of collagen metabolism biological_process GO:0010712 regulation of collagen metabolic process GO:0010712 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the metabolism of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. GOC:dph GOC:tb regulation of collagen metabolism GOC:dph GOC:tb Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the metabolism of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. biological_process GO:0010713 negative regulation of collagen metabolic process GO:0010713 Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the metabolism of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. GOC:dph GOC:tb Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the metabolism of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. positive regulation of collagen metabolism biological_process GO:0010714 positive regulation of collagen metabolic process GO:0010714 Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the metabolism of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. GOC:dph GOC:tb positive regulation of collagen metabolism GOC:dph GOC:tb Any process that modulates the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix. regulation of extracellular matrix breakdown regulation of extracellular matrix degradation biological_process GO:0010715 regulation of extracellular matrix disassembly GO:0010715 Any process that modulates the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix. GOC:BHF GOC:dph GOC:tb regulation of extracellular matrix breakdown GOC:dph GOC:tb regulation of extracellular matrix degradation GOC:dph GOC:tb Any process that decreases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix. down regulation of extracellular matrix disassembly down-regulation of extracellular matrix disassembly downregulation of extracellular matrix disassembly negative regulation of extracellular matrix breakdown negative regulation of extracellular matrix degradation inhibition of extracellular matrix disassembly biological_process GO:0010716 negative regulation of extracellular matrix disassembly GO:0010716 Any process that decreases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix. GOC:BHF GOC:dph GOC:tb down regulation of extracellular matrix disassembly GOC:dph GOC:tb down-regulation of extracellular matrix disassembly GOC:dph GOC:tb downregulation of extracellular matrix disassembly GOC:dph GOC:tb negative regulation of extracellular matrix breakdown GOC:dph GOC:tb negative regulation of extracellular matrix degradation GOC:dph GOC:tb inhibition of extracellular matrix disassembly GOC:dph GOC:tb Any process that modulates the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. biological_process GO:0010717 regulation of epithelial to mesenchymal transition GO:0010717 Any process that modulates the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. GOC:BHF GOC:dph GOC:tb Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition is where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. biological_process GO:0010718 positive regulation of epithelial to mesenchymal transition GO:0010718 Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition is where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. GOC:BHF GOC:dph GOC:tb Any process that decreases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. biological_process GO:0010719 negative regulation of epithelial to mesenchymal transition GO:0010719 Any process that decreases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. GOC:BHF GOC:dph GOC:tb Any process that increases the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate. biological_process GO:0010720 positive regulation of cell development GO:0010720 Any process that increases the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate. GOC:BHF GOC:dph GOC:tb Any process that decreases the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate. biological_process GO:0010721 negative regulation of cell development GO:0010721 Any process that decreases the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate. GOC:BHF GOC:dph GOC:tb Cell migration that is accomplished by extension and retraction of a fibroblast pseudopodium. A fibroblast is a connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules. fibroblast cell migration biological_process GO:0010761 fibroblast migration GO:0010761 Cell migration that is accomplished by extension and retraction of a fibroblast pseudopodium. A fibroblast is a connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules. GOC:BHF GOC:dph GOC:tb fibroblast cell migration GOC:dph Any process that modulates the rate, frequency or extent of fibroblast cell migration. Fibroblast cell migration is accomplished by extension and retraction of a pseudopodium. regulation of fibroblast cell migration biological_process GO:0010762 regulation of fibroblast migration GO:0010762 Any process that modulates the rate, frequency or extent of fibroblast cell migration. Fibroblast cell migration is accomplished by extension and retraction of a pseudopodium. GOC:dph GOC:tb regulation of fibroblast cell migration GOC:dph Any process that increases the rate, frequency or extent of fibroblast cell migration. Fibroblast cell migration is accomplished by extension and retraction of a pseudopodium. positive regulation of fibroblast cell migration biological_process GO:0010763 positive regulation of fibroblast migration GO:0010763 Any process that increases the rate, frequency or extent of fibroblast cell migration. Fibroblast cell migration is accomplished by extension and retraction of a pseudopodium. GOC:BHF GOC:dph GOC:tb positive regulation of fibroblast cell migration GOC:dph Any process that decreases the rate, frequency or extent of fibroblast cell migration. Fibroblast cell migration is accomplished by extension and retraction of a pseudopodium. negative regulation of fibroblast cell migration biological_process GO:0010764 negative regulation of fibroblast migration GO:0010764 Any process that decreases the rate, frequency or extent of fibroblast cell migration. Fibroblast cell migration is accomplished by extension and retraction of a pseudopodium. GOC:dph GOC:tb negative regulation of fibroblast cell migration GOC:dph Any process that increases the frequency, rate or extent of cell morphogenesis contributing to cell differentiation. Cell morphogenesis involved in differentiation is the change in form (cell shape and size) that occurs when relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. biological_process GO:0010770 positive regulation of cell morphogenesis GO:0010770 Any process that increases the frequency, rate or extent of cell morphogenesis contributing to cell differentiation. Cell morphogenesis involved in differentiation is the change in form (cell shape and size) that occurs when relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. GOC:dph GOC:tb Any process that decreases the frequency, rate or extent of cell morphogenesis contributing to cell differentiation. Cell morphogenesis involved in differentiation is the change in form (cell shape and size) that occurs when relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. biological_process GO:0010771 negative regulation of cell morphogenesis GO:0010771 Any process that decreases the frequency, rate or extent of cell morphogenesis contributing to cell differentiation. Cell morphogenesis involved in differentiation is the change in form (cell shape and size) that occurs when relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. GOC:dph GOC:tb Any process that modulates the levels of hormone within an organism or a tissue. A hormone is any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. biological_process GO:0010817 regulation of hormone levels GO:0010817 Any process that modulates the levels of hormone within an organism or a tissue. A hormone is any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. GOC:BHF GOC:dph GOC:tb Any process that modulates the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. biological_process GO:0010830 regulation of myotube differentiation GO:0010830 Any process that modulates the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. GOC:dph GOC:tb Any process that activates, maintains or increases the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. biological_process GO:0010831 positive regulation of myotube differentiation GO:0010831 Any process that activates, maintains or increases the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. GOC:dph GOC:tb Any process that decreases the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. biological_process GO:0010832 negative regulation of myotube differentiation GO:0010832 Any process that decreases the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. GOC:dph GOC:tb The process in which the vertebrate retina is organized into three laminae: the outer nuclear layer (ONL), which contains photoreceptor nuclei; the inner nuclear layer (INL), which contains amacrine, bipolar and horizontal cells; and the retinal ganglion cell (RGC) layer. Between the inner and outer nuclear layers, the outer plexiform layer (OPL) contains connections between the photoreceptors and bipolar and horizontal cells. The inner plexiform layer (IPL) is positioned between the INL and the ganglion cell layer and contains the dendrites of RGCs and processes of bipolar and amacrine cells. Spanning all layers of the retina are the radially oriented Mueller glia. retinal lamination retinal layer formation biological_process GO:0010842 retina layer formation GO:0010842 The process in which the vertebrate retina is organized into three laminae: the outer nuclear layer (ONL), which contains photoreceptor nuclei; the inner nuclear layer (INL), which contains amacrine, bipolar and horizontal cells; and the retinal ganglion cell (RGC) layer. Between the inner and outer nuclear layers, the outer plexiform layer (OPL) contains connections between the photoreceptors and bipolar and horizontal cells. The inner plexiform layer (IPL) is positioned between the INL and the ganglion cell layer and contains the dendrites of RGCs and processes of bipolar and amacrine cells. Spanning all layers of the retina are the radially oriented Mueller glia. GOC:ascb_2009 GOC:dph GOC:tb PMID:1270266 retinal lamination GOC:dph GOC:tb retinal layer formation GOC:dph GOC:tb Any process in which a lipid is transported to, or maintained in, a specific location. lipid localisation biological_process GO:0010876 lipid localization GO:0010876 Any process in which a lipid is transported to, or maintained in, a specific location. GOC:BHF GOC:dph GOC:tb lipid localisation GOC:mah Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus. biological_process GO:0010893 positive regulation of steroid biosynthetic process GO:0010893 Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus. GOC:tb Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus. biological_process GO:0010894 negative regulation of steroid biosynthetic process GO:0010894 Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus. GOC:BHF GOC:tb The cellular component assembly that is part of the initial shaping of the component during its developmental progression. biological_process GO:0010927 cellular component assembly involved in morphogenesis GO:0010927 The cellular component assembly that is part of the initial shaping of the component during its developmental progression. GOC:dph GOC:tb Any process that modulates the frequency, rate or extent of cytoplasmic microtubule depolymerization. biological_process GO:0010937 regulation of cytoplasmic microtubule depolymerization GO:0010937 Any process that modulates the frequency, rate or extent of cytoplasmic microtubule depolymerization. GOC:dph GOC:tb The removal of tubulin heterodimers from one or both ends of a cytoplasmic microtubule. biological_process GO:0010938 cytoplasmic microtubule depolymerization GO:0010938 The removal of tubulin heterodimers from one or both ends of a cytoplasmic microtubule. GOC:dph GOC:tb Any process that decreases the rate, frequency or extent of a cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. tb 2009-04-27T09:53:22Z biological_process GO:0010948 negative regulation of cell cycle process GO:0010948 Any process that decreases the rate, frequency or extent of a cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. GOC:dph GOC:tb Any process that modulates the frequency, rate or extent of amino acid import into a cell. tb 2009-05-06T11:33:12Z regulation of amino acid import biological_process GO:0010958 regulation of amino acid import across plasma membrane GO:0010958 Any process that modulates the frequency, rate or extent of amino acid import into a cell. GOC:dph GOC:tb Any process that modulates the rate, frequency or extent of microtubule nucleation. Microtubule nucleation is the 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell. tb 2009-05-20T11:51:21Z biological_process GO:0010968 regulation of microtubule nucleation GO:0010968 Any process that modulates the rate, frequency or extent of microtubule nucleation. Microtubule nucleation is the 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell. GOC:dph GOC:tb The movement of organelles or other particles from one location in the cell to another along microtubules, driven by motor activity. tb 2009-05-27T10:56:08Z microtubule-based transport establishment of localization by movement along microtubule movement along microtubule biological_process GO:0010970 transport along microtubule GO:0010970 The movement of organelles or other particles from one location in the cell to another along microtubules, driven by motor activity. GOC:dph GOC:mah GOC:tb establishment of localization by movement along microtubule GOC:dph Any process that modulates the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites). tb 2009-06-01T10:44:45Z regulation of neurite biosynthesis regulation of neurite development regulation of neurite formation regulation of neurite growth biological_process GO:0010975 regulation of neuron projection development GO:0010975 Any process that modulates the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites). GOC:dph GOC:tb regulation of neurite biosynthesis GOC:mah regulation of neurite development GOC:mah regulation of neurite formation GOC:mah regulation of neurite growth GOC:mah Any process that increases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites). tb 2009-06-01T10:46:44Z positive regulation of neurite biosynthesis positive regulation of neurite development positive regulation of neurite formation positive regulation of neurite growth biological_process GO:0010976 positive regulation of neuron projection development GO:0010976 Any process that increases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites). GOC:dph GOC:tb positive regulation of neurite biosynthesis GOC:mah positive regulation of neurite development GOC:mah positive regulation of neurite formation GOC:mah positive regulation of neurite growth GOC:mah Any process that decreases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites). tb 2009-06-01T10:47:42Z negative regulation of neurite biosynthesis negative regulation of neurite development negative regulation of neurite formation negative regulation of neurite growth biological_process growth cone collapse GO:0010977 negative regulation of neuron projection development GO:0010977 Any process that decreases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites). GOC:dph GOC:tb negative regulation of neurite biosynthesis GOC:mah negative regulation of neurite development GOC:mah negative regulation of neurite formation GOC:mah negative regulation of neurite growth GOC:mah growth cone collapse GOC:pr A process which begins when a cell receives an internal or external signal and activates a series of biochemical events (signaling pathway). The process ends with the death of the cell. GO:0016244 regulated cell death Reactome:R-HSA-5357801 Wikipedia:Programmed_cell_death caspase-independent cell death non-apoptotic programmed cell death nonapoptotic programmed cell death biological_process PCD RCD caspase-independent apoptosis GO:0012501 Note that this term should be used to annotate gene products in the organism undergoing the programmed cell death. To annotate genes in another organism whose products modulate programmed cell death in a host organism, consider the term 'modulation by symbiont of host programmed cell death ; GO:0052040'. Also, note that 'programmed cell death ; GO:0012501' should be used to refer to instances of caspase-independent cell death mechanisms, in the absence of further indications on the process taking place. At present, caspase-independent cell death is not yet represented in GO due to the lack of consensus and in-depth research on the topic. 'programmed cell death ; GO:0012501' may also be used to annotate gene products in taxa where apoptosis as defined in GO:0006915 does not occur, such as plants. You may also consider these specific children: GO:0097468 'programmed cell death in response to reactive oxygen species' (with descendants GO:0010421 'hydrogen peroxide-mediated programmed cell death' and GO:0010343 'singlet oxygen-mediated programmed cell death'), and GO:0009626 'plant-type hypersensitive response' and its children. programmed cell death GO:0012501 A process which begins when a cell receives an internal or external signal and activates a series of biochemical events (signaling pathway). The process ends with the death of the cell. GOC:lr GOC:mtg_apoptosis Reactome:R-HSA-5357801 Programmed Cell Death A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles. Wikipedia:Endomembrane_system cellular_component GO:0012505 endomembrane system GO:0012505 A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles. GOC:lh The lipid bilayer surrounding any membrane-bounded vesicle in the cell. NIF_Subcellular:sao1153182838 cellular_component GO:0012506 vesicle membrane GO:0012506 The lipid bilayer surrounding any membrane-bounded vesicle in the cell. GOC:mah GOC:vesicle The process whose specific outcome is the progression of the morula over time. The morula is a spherical embryonic mass of blastomeres formed before the blastula and resulting from cleavage of the fertilized ovum. pg 2024-11-12T09:13:07Z biological_process GO:0014000 morula development GO:0014000 The process whose specific outcome is the progression of the morula over time. The morula is a spherical embryonic mass of blastomeres formed before the blastula and resulting from cleavage of the fertilized ovum. PMID:37935903 PMID:38386558 PMID:39361745 The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system. oligodendrocyte cell development biological_process GO:0014003 oligodendrocyte development GO:0014003 The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system. GOC:dgh GOC:ef The multiplication or reproduction of glial cells by cell division, resulting in the expansion of their population. Glial cells exist throughout the nervous system, and include Schwann cells, astrocytes, and oligodendrocytes among others. glia proliferation biological_process GO:0014009 glial cell proliferation GO:0014009 The multiplication or reproduction of glial cells by cell division, resulting in the expansion of their population. Glial cells exist throughout the nervous system, and include Schwann cells, astrocytes, and oligodendrocytes among others. GOC:ef ISBN:0878932585 The multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system. biological_process GO:0014010 Schwann cell proliferation GO:0014010 The multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system. GOC:ef ISBN:0878932585 Any process that modulates the frequency, rate or extent of gliogenesis, the formation of mature glia. biological_process GO:0014013 regulation of gliogenesis GO:0014013 Any process that modulates the frequency, rate or extent of gliogenesis, the formation of mature glia. GOC:ef Any process that stops, prevents, or reduces the frequency, rate or extent of gliogenesis, the formation of mature glia. down regulation of gliogenesis down-regulation of gliogenesis downregulation of gliogenesis inhibition of gliogenesis biological_process GO:0014014 negative regulation of gliogenesis GO:0014014 Any process that stops, prevents, or reduces the frequency, rate or extent of gliogenesis, the formation of mature glia. GOC:ef Any process that activates or increases the frequency, rate or extent of gliogenesis, the formation of mature glia. up regulation of gliogenesis up-regulation of gliogenesis upregulation of gliogenesis activation of gliogenesis stimulation of gliogenesis biological_process GO:0014015 positive regulation of gliogenesis GO:0014015 Any process that activates or increases the frequency, rate or extent of gliogenesis, the formation of mature glia. GOC:ef The process in which a relatively unspecialized cell acquires specialized features of a neuroblast. There are at least four stages through which the pluripotent cells of epiblast or blastula become neuroblasts. biological_process GO:0014016 neuroblast differentiation GO:0014016 The process in which a relatively unspecialized cell acquires specialized features of a neuroblast. There are at least four stages through which the pluripotent cells of epiblast or blastula become neuroblasts. GOC:ef ISBN:0878932585 The process aimed at the progression of a neuroblast over time, from initial commitment of the cell to a specific state, to the mature neuroblast. It does not include processes where the neuroblast turns into a glial cell or a neuron. biological_process GO:0014019 neuroblast development GO:0014019 The process aimed at the progression of a neuroblast over time, from initial commitment of the cell to a specific state, to the mature neuroblast. It does not include processes where the neuroblast turns into a glial cell or a neuron. GOC:ef ISBN:0878932585 The formation of the neural tube from an epithelial cell sheet (the neuroepithelium or neural plate). In primary neurulation, the cells surrounding the neural plate direct the neural plate cells to proliferate, invaginate, and pinch off from the surface to form a hollow epithelial tube. Primary neurulation is the typical mechanism of formation of the anterior neural tube. GO:0014024 primary neural tube morphogenesis primary neurulation biological_process neural rod cavitation GO:0014020 primary neural tube formation GO:0014020 The formation of the neural tube from an epithelial cell sheet (the neuroepithelium or neural plate). In primary neurulation, the cells surrounding the neural plate direct the neural plate cells to proliferate, invaginate, and pinch off from the surface to form a hollow epithelial tube. Primary neurulation is the typical mechanism of formation of the anterior neural tube. GOC:ef ISBN:0878932585 PMID:15327780 primary neural tube morphogenesis GOC:dph The formation of a solid rod of neurectoderm derived from the neural keel. The neural rod is roughly circular in cross section. Neural rod formation occurs during primary neurulation in teleosts. biological_process GO:0014023 neural rod formation GO:0014023 The formation of a solid rod of neurectoderm derived from the neural keel. The neural rod is roughly circular in cross section. Neural rod formation occurs during primary neurulation in teleosts. GOC:dh GOC:ef The formation of a thickened region of the neurectoderm that is roughly triangular in cross section. The neural keel develops from the neural plate and develops into the neural rod. Neural keel formation occurs during primary neurulation in teleosts. biological_process GO:0014025 neural keel formation GO:0014025 The formation of a thickened region of the neurectoderm that is roughly triangular in cross section. The neural keel develops from the neural plate and develops into the neural rod. Neural keel formation occurs during primary neurulation in teleosts. GOC:dh GOC:ef The formation of the notochord from the chordamesoderm. The notochord is composed of large cells packed within a firm connective tissue sheath and is found in all chordates at the ventral surface of the neural tube. In vertebrates, the notochord contributes to the vertebral column. biological_process GO:0014028 notochord formation GO:0014028 The formation of the notochord from the chordamesoderm. The notochord is composed of large cells packed within a firm connective tissue sheath and is found in all chordates at the ventral surface of the neural tube. In vertebrates, the notochord contributes to the vertebral column. GOC:dh GOC:ef The formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds. biological_process GO:0014029 neural crest formation GO:0014029 The formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds. GOC:dh GOC:ef The process aimed at the progression of a mesenchymal cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. biological_process GO:0014031 mesenchymal cell development GO:0014031 The process aimed at the progression of a mesenchymal cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. GOC:dh GOC:ef The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. biological_process GO:0014032 neural crest cell development GO:0014032 The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. GOC:dh GOC:ef The process in which a relatively unspecialized cell acquires specialized features of a neural crest cell. biological_process GO:0014033 neural crest cell differentiation GO:0014033 The process in which a relatively unspecialized cell acquires specialized features of a neural crest cell. GOC:dh GOC:ef The process in which a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function. biological_process GO:0014037 Schwann cell differentiation GO:0014037 The process in which a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function. GOC:ef Any process that modulates the frequency, rate or extent of Schwann cell differentiation. biological_process GO:0014038 regulation of Schwann cell differentiation GO:0014038 Any process that modulates the frequency, rate or extent of Schwann cell differentiation. GOC:ef Any process that stops, prevents, or reduces the frequency, rate or extent of Schwann cell differentiation. down regulation of Schwann cell differentiation down-regulation of Schwann cell differentiation downregulation of Schwann cell differentiation inhibition of Schwann cell differentiation biological_process GO:0014039 negative regulation of Schwann cell differentiation GO:0014039 Any process that stops, prevents, or reduces the frequency, rate or extent of Schwann cell differentiation. GOC:ef Any process that activates or increases the frequency, rate or extent of Schwann cell differentiation. up regulation of Schwann cell differentiation up-regulation of Schwann cell differentiation upregulation of Schwann cell differentiation activation of Schwann cell differentiation stimulation of Schwann cell differentiation biological_process GO:0014040 positive regulation of Schwann cell differentiation GO:0014040 Any process that activates or increases the frequency, rate or extent of Schwann cell differentiation. GOC:ef Any process that modulates the frequency, rate or extent of neuron maturation, the process leading to the attainment of the full functional capacity of a neuron. This process is independent of morphogenetic change. biological_process GO:0014041 regulation of neuron maturation GO:0014041 Any process that modulates the frequency, rate or extent of neuron maturation, the process leading to the attainment of the full functional capacity of a neuron. This process is independent of morphogenetic change. GOC:ef Any process that activates or increases the frequency, rate or extent of neuron maturation. up regulation of neuron maturation up-regulation of neuron maturation upregulation of neuron maturation activation of neuron maturation stimulation of neuron maturation biological_process GO:0014042 positive regulation of neuron maturation GO:0014042 Any process that activates or increases the frequency, rate or extent of neuron maturation. GOC:ef Any process that stops, prevents, or reduces the frequency, rate or extent of neuron maturation. down regulation of neuron maturation down-regulation of neuron maturation downregulation of neuron maturation inhibition of neuron maturation biological_process GO:0014043 negative regulation of neuron maturation GO:0014043 Any process that stops, prevents, or reduces the frequency, rate or extent of neuron maturation. GOC:ef The process aimed at the progression of a Schwann cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function. biological_process GO:0014044 Schwann cell development GO:0014044 The process aimed at the progression of a Schwann cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function. GOC:dgh GOC:ef The regulated release of acetylcholine by a cell. The acetylcholine acts as a neurotransmitter that acts in both the peripheral nervous system (PNS) and central nervous system (CNS). biological_process GO:0014055 acetylcholine secretion, neurotransmission GO:0014055 The regulated release of acetylcholine by a cell. The acetylcholine acts as a neurotransmitter that acts in both the peripheral nervous system (PNS) and central nervous system (CNS). GOC:ef Any process that modulates the frequency, rate or extent of the regulated release of acetylcholine. biological_process GO:0014056 regulation of acetylcholine secretion, neurotransmission GO:0014056 Any process that modulates the frequency, rate or extent of the regulated release of acetylcholine. GOC:ef Any process that activates or increases the frequency, rate or extent of the regulated release of acetylcholine. up regulation of acetylcholine secretion up-regulation of acetylcholine secretion upregulation of acetylcholine secretion activation of acetylcholine secretion stimulation of acetylcholine secretion biological_process GO:0014057 positive regulation of acetylcholine secretion, neurotransmission GO:0014057 Any process that activates or increases the frequency, rate or extent of the regulated release of acetylcholine. GOC:ef Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of acetylcholine. down regulation of acetylcholine secretion down-regulation of acetylcholine secretion downregulation of acetylcholine secretion inhibition of acetylcholine secretion biological_process GO:0014058 negative regulation of acetylcholine secretion, neurotransmission GO:0014058 Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of acetylcholine. GOC:ef Any process that modulates the frequency, rate or extent of the regulated release of norepinephrine. regulation of noradrenaline secretion biological_process GO:0014061 regulation of norepinephrine secretion GO:0014061 Any process that modulates the frequency, rate or extent of the regulated release of norepinephrine. GOC:ef Any process that modulates the frequency, rate or extent of the regulated release of serotonin. biological_process regulation of serotonin release GO:0014062 regulation of serotonin secretion GO:0014062 Any process that modulates the frequency, rate or extent of the regulated release of serotonin. GOC:ef regulation of serotonin release GOC:tb Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of serotonin. down regulation of serotonin secretion down-regulation of serotonin secretion downregulation of serotonin secretion inhibition of serotonin secretion biological_process positive regulation of serotonin release GO:0014063 negative regulation of serotonin secretion GO:0014063 Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of serotonin. GOC:ef positive regulation of serotonin release GOC:tb Any process that activates or increases the frequency, rate or extent of the regulated release of serotonin. up regulation of serotonin secretion up-regulation of serotonin secretion upregulation of serotonin secretion activation of serotonin secretion stimulation of serotonin secretion biological_process positive regulation of serotonin release GO:0014064 positive regulation of serotonin secretion GO:0014064 Any process that activates or increases the frequency, rate or extent of the regulated release of serotonin. GOC:ef positive regulation of serotonin release GOC:tb Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amine stimulus. An amine is a compound formally derived from ammonia by replacing one, two or three hydrogen atoms by hydrocarbyl groups. response to amine stimulus biological_process GO:0014075 response to amine GO:0014075 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amine stimulus. An amine is a compound formally derived from ammonia by replacing one, two or three hydrogen atoms by hydrocarbyl groups. GOC:ef response to amine stimulus GOC:dos The process whose specific outcome is the progression of a striated muscle over time, from its formation to the mature structure. Striated muscle contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle. Skeletal muscle myoblasts fuse to form myotubes and eventually multinucleated muscle fibers. The fusion of cardiac cells is very rare and can only form binucleate cells. biological_process GO:0014706 striated muscle tissue development GO:0014706 The process whose specific outcome is the progression of a striated muscle over time, from its formation to the mature structure. Striated muscle contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle. Skeletal muscle myoblasts fuse to form myotubes and eventually multinucleated muscle fibers. The fusion of cardiac cells is very rare and can only form binucleate cells. CL:0000737 GOC:dph GOC:mtg_muscle Any process in which skeletal muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities. biological_process regulation of skeletal muscle plasticity GO:0014733 regulation of skeletal muscle adaptation GO:0014733 Any process in which skeletal muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities. GOC:mtg_muscle The enlargement or overgrowth of all or part of an organ due to an increase in size (not length) of individual muscle fibers without cell division. In the case of skeletal muscle cells this happens due to the additional synthesis of sarcomeric proteins and assembly of myofibrils. biological_process GO:0014734 skeletal muscle hypertrophy GO:0014734 The enlargement or overgrowth of all or part of an organ due to an increase in size (not length) of individual muscle fibers without cell division. In the case of skeletal muscle cells this happens due to the additional synthesis of sarcomeric proteins and assembly of myofibrils. GOC:mtg_muscle Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle hypertrophy. biological_process GO:0014741 negative regulation of muscle hypertrophy GO:0014741 Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle hypertrophy. GOC:mtg_muscle Any process that activates or increases the frequency, rate or extent of muscle hypertrophy. biological_process GO:0014742 positive regulation of muscle hypertrophy GO:0014742 Any process that activates or increases the frequency, rate or extent of muscle hypertrophy. GOC:mtg_muscle Any process that modulates the frequency, rate or extent of muscle hypertrophy. biological_process GO:0014743 regulation of muscle hypertrophy GO:0014743 Any process that modulates the frequency, rate or extent of muscle hypertrophy. GOC:mtg_muscle Any process that activates or increases the frequency, rate or extent of muscle adaptation. biological_process positive regulation of muscle plasticity GO:0014744 positive regulation of muscle adaptation GO:0014744 Any process that activates or increases the frequency, rate or extent of muscle adaptation. GOC:mtg_muscle Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle adaptation. biological_process negative regulation of muscle plasticity GO:0014745 negative regulation of muscle adaptation GO:0014745 Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle adaptation. GOC:mtg_muscle Any process in which smooth muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities. biological_process smooth muscle plasticity GO:0014805 smooth muscle adaptation GO:0014805 Any process in which smooth muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities. GOC:mtg_muscle Any process that modulates the frequency, rate or extent of somitogenesis. biological_process GO:0014807 regulation of somitogenesis GO:0014807 Any process that modulates the frequency, rate or extent of somitogenesis. GOC:mtg_muscle The orderly movement of a muscle cell from one site to another, often during the development of a multicellular organism. biological_process GO:0014812 muscle cell migration GO:0014812 The orderly movement of a muscle cell from one site to another, often during the development of a multicellular organism. CL:0000187 GOC:mtg_muscle Any process that modulates the frequency, rate or extent of skeletal muscle contraction. biological_process GO:0014819 regulation of skeletal muscle contraction GO:0014819 Any process that modulates the frequency, rate or extent of skeletal muscle contraction. GOC:ef GOC:mtg_muscle Any process that modulates the frequency, rate or extent of skeletal muscle contraction by variation of the pattern of stimulation by nervous system. biological_process GO:0014852 regulation of skeletal muscle contraction by neural stimulation via neuromuscular junction GO:0014852 Any process that modulates the frequency, rate or extent of skeletal muscle contraction by variation of the pattern of stimulation by nervous system. GOC:ef GOC:mtg_muscle The multiplication or reproduction of striated muscle cells, resulting in the expansion of a cell population. Striated muscles contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle. biological_process GO:0014855 striated muscle cell proliferation GO:0014855 The multiplication or reproduction of striated muscle cells, resulting in the expansion of a cell population. Striated muscles contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle. CL:0000737 GOC:ef GOC:mtg_muscle The multiplication or reproduction of skeletal muscle cells, resulting in the expansion of a cell population. biological_process GO:0014856 skeletal muscle cell proliferation GO:0014856 The multiplication or reproduction of skeletal muscle cells, resulting in the expansion of a cell population. CL:0000188 GOC:ef GOC:mtg_muscle Any process that modulates the frequency, rate or extent of skeletal muscle cell proliferation. biological_process GO:0014857 regulation of skeletal muscle cell proliferation GO:0014857 Any process that modulates the frequency, rate or extent of skeletal muscle cell proliferation. CL:0000188 GOC:ef GOC:mtg_muscle Any process that activates or increases the frequency, rate or extent of skeletal muscle cell proliferation. biological_process GO:0014858 positive regulation of skeletal muscle cell proliferation GO:0014858 Any process that activates or increases the frequency, rate or extent of skeletal muscle cell proliferation. CL:0000188 GOC:ef GOC:mtg_muscle Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle cell proliferation. biological_process GO:0014859 negative regulation of skeletal muscle cell proliferation GO:0014859 Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle cell proliferation. CL:0000188 GOC:ef GOC:mtg_muscle The regulated release of neurotransmitter into the synaptic cleft involved in skeletal muscle contraction. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin. neurotransmitter secretion involved in control of skeletal muscle contraction biological_process GO:0014860 neurotransmitter secretion involved in regulation of skeletal muscle contraction GO:0014860 The regulated release of neurotransmitter into the synaptic cleft involved in skeletal muscle contraction. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin. GOC:dph GOC:mtg_muscle GOC:tb neurotransmitter secretion involved in control of skeletal muscle contraction GOC:dph GOC:tb Any process that modulates the frequency, rate or extent of skeletal muscle contraction by depolarization of muscle membrane and ionic fluxes. biological_process regulation of skeletal muscle contraction via membrane action potential GO:0014861 regulation of skeletal muscle contraction via regulation of action potential GO:0014861 Any process that modulates the frequency, rate or extent of skeletal muscle contraction by depolarization of muscle membrane and ionic fluxes. GOC:BHF GOC:mtg_cardiac_conduct_nov11 GOC:mtg_muscle The process whose specific outcome is the progression of the skeletal myofibril over time, from its formation to the mature structure. A skeletal myofibril is a myofibril specific to skeletal muscle cells. biological_process GO:0014866 skeletal myofibril assembly GO:0014866 The process whose specific outcome is the progression of the skeletal myofibril over time, from its formation to the mature structure. A skeletal myofibril is a myofibril specific to skeletal muscle cells. GOC:ef GOC:mtg_muscle The process resulting in the physical partitioning and separation of a myoblast into daughter cells. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. biological_process GO:0014872 myoblast division GO:0014872 The process resulting in the physical partitioning and separation of a myoblast into daughter cells. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. CL:0000056 GOC:ef GOC:mtg_muscle Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. This occurs as part of the regulation of muscle adaptation. biological_process response to stimulus involved in regulation of muscle plasticity GO:0014874 response to stimulus involved in regulation of muscle adaptation GO:0014874 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. This occurs as part of the regulation of muscle adaptation. GOC:ef GOC:mtg_muscle The process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. biological_process cardiac muscle plasticity GO:0014887 cardiac muscle adaptation GO:0014887 The process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. GOC:mtg_muscle Any process in which striated muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities. biological_process striated muscle plasticity GO:0014888 striated muscle adaptation GO:0014888 Any process in which striated muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities. GOC:mtg_muscle The enlargement or overgrowth of all or part of an organ due to an increase in size of its smooth muscle cells without cell division. Physiological hypertrophy is a normal process during development, and can also occur in mature structures on demand. In the uterus, smooth muscle cells undergo hypertrophy during pregnancy. biological_process GO:0014895 smooth muscle hypertrophy GO:0014895 The enlargement or overgrowth of all or part of an organ due to an increase in size of its smooth muscle cells without cell division. Physiological hypertrophy is a normal process during development, and can also occur in mature structures on demand. In the uterus, smooth muscle cells undergo hypertrophy during pregnancy. GOC:mtg_muscle The muscle system process that results in enlargement or overgrowth of all or part of a muscle organ due to an increase in the size of its muscle cells. Physiological hypertrophy is a normal process during development (it stops in cardiac muscle after adolescence) and can also be brought on in response to demand. In athletes cardiac and skeletal muscles undergo hypertrophy stimulated by increasing muscle activity on exercise. Smooth muscle cells in the uterus undergo hypertrophy during pregnancy. Wikipedia:Muscle_hypertrophy biological_process GO:0014896 muscle hypertrophy GO:0014896 The muscle system process that results in enlargement or overgrowth of all or part of a muscle organ due to an increase in the size of its muscle cells. Physiological hypertrophy is a normal process during development (it stops in cardiac muscle after adolescence) and can also be brought on in response to demand. In athletes cardiac and skeletal muscles undergo hypertrophy stimulated by increasing muscle activity on exercise. Smooth muscle cells in the uterus undergo hypertrophy during pregnancy. GOC:mtg_muscle The enlargement or overgrowth of all or part of an organ due to an increase in size of muscle cells without cell division. In the case of striated muscle, this happens due to the additional synthesis of sarcomeric proteins and assembly of myofibrils. biological_process GO:0014897 striated muscle hypertrophy GO:0014897 The enlargement or overgrowth of all or part of an organ due to an increase in size of muscle cells without cell division. In the case of striated muscle, this happens due to the additional synthesis of sarcomeric proteins and assembly of myofibrils. GOC:mtg_muscle The process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotube differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual myotubes can fuse to form bigger myotubes and start to contract. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. biological_process GO:0014902 myotube differentiation GO:0014902 The process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotube differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual myotubes can fuse to form bigger myotubes and start to contract. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. GOC:mtg_muscle The process aimed at the progression of a myotube cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. biological_process GO:0014904 myotube cell development GO:0014904 The process aimed at the progression of a myotube cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. GOC:mtg_muscle The orderly movement of a smooth muscle cell from one site to another, often during the development of a multicellular organism. biological_process GO:0014909 smooth muscle cell migration GO:0014909 The orderly movement of a smooth muscle cell from one site to another, often during the development of a multicellular organism. CL:0000192 GOC:mtg_muscle Any process that modulates the frequency, rate or extent of smooth muscle cell migration. biological_process GO:0014910 regulation of smooth muscle cell migration GO:0014910 Any process that modulates the frequency, rate or extent of smooth muscle cell migration. CL:0000192 GOC:mtg_muscle Any process that activates, maintains or increases the frequency, rate or extent of smooth muscle cell migration. biological_process GO:0014911 positive regulation of smooth muscle cell migration GO:0014911 Any process that activates, maintains or increases the frequency, rate or extent of smooth muscle cell migration. CL:0000192 GOC:mtg_muscle Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle cell migration. biological_process GO:0014912 negative regulation of smooth muscle cell migration GO:0014912 Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle cell migration. CL:0000192 GOC:mtg_muscle The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GO:0015831 enzyme transport biological_process GO:0015031 protein transport GO:0015031 The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes. cellular_component GO:0015629 actin cytoskeleton GO:0015629 The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes. GOC:jl ISBN:0395825172 ISBN:0815316194 The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins. cellular_component GO:0015630 microtubule cytoskeleton GO:0015630 The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins. GOC:jl ISBN:0395825172 The directed movement of substances that are gaseous in normal living conditions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process GO:0015669 gas transport GO:0015669 The directed movement of substances that are gaseous in normal living conditions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai The directed movement of oxygen (O2) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Reactome:R-HSA-8981607 biological_process GO:0015671 oxygen transport GO:0015671 The directed movement of oxygen (O2) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai Reactome:R-HSA-8981607 Intracellular oxygen transport The directed movement of organic cations into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Organic cations are atoms or small molecules with a positive charge which contain carbon in covalent linkage. biological_process GO:0015695 organic cation transport GO:0015695 The directed movement of organic cations into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Organic cations are atoms or small molecules with a positive charge which contain carbon in covalent linkage. GOC:ai The directed movement of inorganic anions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Inorganic anions are atoms or small molecules with a negative charge which do not contain carbon in covalent linkage. biological_process GO:0015698 inorganic anion transport GO:0015698 The directed movement of inorganic anions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Inorganic anions are atoms or small molecules with a negative charge which do not contain carbon in covalent linkage. GOC:krc The directed movement of organic anions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage. biological_process GO:0015711 organic anion transport GO:0015711 The directed movement of organic anions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage. GOC:ai GOC:krc The directed movement of monocarboxylic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process GO:0015718 monocarboxylic acid transport GO:0015718 The directed movement of monocarboxylic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:krc The directed movement of polysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically. biological_process GO:0015774 polysaccharide transport GO:0015774 The directed movement of polysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically. GOC:ai The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process GO:0015833 peptide transport GO:0015833 The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai The directed movement of amines, including polyamines, organic compounds containing one or more amino groups, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process amine/polyamine transport GO:0015837 amine transport GO:0015837 The directed movement of amines, including polyamines, organic compounds containing one or more amino groups, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai ISBN:0198506732 The directed movement of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GO:0015873 biological_process GO:0015844 monoamine transport GO:0015844 The directed movement of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:mah The directed movement of organic acids, any acidic compound containing carbon in covalent linkage, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process GO:0015849 organic acid transport GO:0015849 The directed movement of organic acids, any acidic compound containing carbon in covalent linkage, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. ISBN:0198506732 The directed movement of an organic hydroxy compound (organic alcohol) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. An organic hydroxy compound is an organic compound having at least one hydroxy group attached to a carbon atom. organic alcohol transport biological_process GO:0015850 organic hydroxy compound transport GO:0015850 The directed movement of an organic hydroxy compound (organic alcohol) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. An organic hydroxy compound is an organic compound having at least one hydroxy group attached to a carbon atom. GOC:ai The directed movement of a nucleobase, any nitrogenous base that is a constituent of a nucleoside, nucleotide, or nucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. nucleobase transmembrane transport biological_process GO:0015851 nucleobase transport GO:0015851 The directed movement of a nucleobase, any nitrogenous base that is a constituent of a nucleoside, nucleotide, or nucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. ISBN:0198506732 nucleobase transmembrane transport GOC:mah The directed movement of acetylcholine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Acetylcholine is an acetic acid ester of the organic base choline and functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions. biological_process GO:0015870 acetylcholine transport GO:0015870 The directed movement of acetylcholine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Acetylcholine is an acetic acid ester of the organic base choline and functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions. GOC:ai The directed movement of norepinephrine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Norepinephrine (3,4-dihydroxyphenyl-2-aminoethanol) is a hormone secreted by the adrenal medulla and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts of the CNS. It is also the biosynthetic precursor of epinephrine. levarterenol transport noradrenaline transport biological_process GO:0015874 norepinephrine transport GO:0015874 The directed movement of norepinephrine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Norepinephrine (3,4-dihydroxyphenyl-2-aminoethanol) is a hormone secreted by the adrenal medulla and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts of the CNS. It is also the biosynthetic precursor of epinephrine. GOC:ai ISBN:0198506732 The directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process nucleobase, nucleoside, nucleotide and nucleic acid transport GO:0015931 nucleobase-containing compound transport GO:0015931 The directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai nucleobase, nucleoside, nucleotide and nucleic acid transport GOC:dph GOC:tb A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it. 2014-03-06T11:37:54Z GO:0016021 GO:0098589 GO:0098805 Wikipedia:Biological_membrane Wikipedia:Transmembrane_protein integral component of membrane integral to membrane membrane region region of membrane whole membrane cellular_component transmembrane GO:0016020 membrane GO:0016020 A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it. GOC:dos GOC:mah ISBN:0815316194 transmembrane GOC:mah A process that results in the assembly, arrangement of constituent parts, or disassembly of a cellular component. GO:0044235 GO:0071842 cell organisation cellular component organisation at cellular level cellular component organisation in other organism cellular component organization at cellular level cellular component organization in other organism biological_process cell organization and biogenesis GO:0016043 cellular component organization GO:0016043 A process that results in the assembly, arrangement of constituent parts, or disassembly of a cellular component. GOC:ai GOC:jl GOC:mah cellular component organisation at cellular level GOC:mah cellular component organisation in other organism GOC:mah cell organization and biogenesis GOC:mah The process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present. GO:0048591 cellular growth growth of cell biological_process cell expansion metabolic process resulting in cell growth metabolism resulting in cell growth non-developmental cell growth non-developmental growth of a unicellular organism GO:0016049 cell growth GO:0016049 The process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present. GOC:ai non-developmental cell growth GOC:mah non-developmental growth of a unicellular organism GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a vesicle. vesicle organisation biological_process vesicle organization and biogenesis GO:0016050 vesicle organization GO:0016050 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a vesicle. GOC:mah vesicle organization and biogenesis GOC:mah The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. GO:0006093 anabolic carbohydrate metabolic process anabolic carbohydrate metabolism carbohydrate anabolism carbohydrate biosynthesis carbohydrate formation carbohydrate synthesis biological_process GO:0016051 carbohydrate biosynthetic process GO:0016051 The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. ISBN:0198506732 The chemical reactions and pathways resulting in the formation of organic acids, any acidic compound containing carbon in covalent linkage. organic acid anabolism organic acid biosynthesis organic acid formation organic acid synthesis biological_process GO:0016053 organic acid biosynthetic process GO:0016053 The chemical reactions and pathways resulting in the formation of organic acids, any acidic compound containing carbon in covalent linkage. ISBN:0198506732 Hyperpolarization (vertebrates) or depolarization (invertebrates) of the photoreceptor cell membrane via closing/opening of cation specific channels as a result of signals generated by rhodopsin activation by a photon. changes in polarization state of photoreceptor cell membrane biological_process GO:0016057 regulation of membrane potential in photoreceptor cell GO:0016057 Hyperpolarization (vertebrates) or depolarization (invertebrates) of the photoreceptor cell membrane via closing/opening of cation specific channels as a result of signals generated by rhodopsin activation by a photon. GOC:dph GOC:hb GOC:tb changes in polarization state of photoreceptor cell membrane GOC:dph GOC:tb The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. Reactome:R-HSA-8953854 RNA metabolism biological_process GO:0016070 RNA metabolic process GO:0016070 The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. ISBN:0198506732 Reactome:R-HSA-8953854 Metabolism of RNA A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. GO:0006899 vesicle transport vesicular transport nonselective vesicle transport biological_process protein sorting along secretory pathway vesicle trafficking GO:0016192 vesicle-mediated transport GO:0016192 A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. GOC:ai GOC:mah ISBN:08789310662000 vesicular transport GOC:mah Any process that modulates the frequency, rate or extent of striated muscle development. biological_process GO:0016202 regulation of striated muscle tissue development GO:0016202 Any process that modulates the frequency, rate or extent of striated muscle development. GOC:go_curators The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle in a female. biological_process GO:0016321 female meiosis chromosome segregation GO:0016321 The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle in a female. GOC:ai Formation and maintenance of a polarized microtubule array originating from a microtubule-organizing center (MTOC) in the oocyte. An example of this is found in Drosophila melanogaster. GO:0048130 oocyte microtubule cytoskeleton organisation biological_process GO:0016325 oocyte microtubule cytoskeleton organization GO:0016325 Formation and maintenance of a polarized microtubule array originating from a microtubule-organizing center (MTOC) in the oocyte. An example of this is found in Drosophila melanogaster. GOC:mtg_sensu PMID:11231123 The process in which the anatomical structures of embryonic epithelia are generated and organized. biological_process GO:0016331 morphogenesis of embryonic epithelium GO:0016331 The process in which the anatomical structures of embryonic epithelia are generated and organized. GOC:jl The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. biological_process GO:0016358 dendrite development GO:0016358 The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. GOC:aruk GOC:bc GOC:jl ISBN:0198506732 PMID:22683681 The controlled self-propelled movement of a cell from one site to a destination guided by molecular cues. Wikipedia:Cell_migration biological_process GO:0016477 cell migration GO:0016477 The controlled self-propelled movement of a cell from one site to a destination guided by molecular cues. GOC:cjm GOC:dph GOC:ems GOC:pf Wikipedia:Cell_migration The directed movement of substances or organelles within the cytosol. biological_process GO:0016482 cytosolic transport GO:0016482 The directed movement of substances or organelles within the cytosol. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of angiogenesis. down regulation of angiogenesis down-regulation of angiogenesis downregulation of angiogenesis inhibition of angiogenesis biological_process GO:0016525 negative regulation of angiogenesis GO:0016525 Any process that stops, prevents, or reduces the frequency, rate or extent of angiogenesis. GOC:go_curators The cytoplasm of a muscle cell; includes the sarcoplasmic reticulum. Wikipedia:Sarcoplasm cellular_component GO:0016528 sarcoplasm GO:0016528 The cytoplasm of a muscle cell; includes the sarcoplasmic reticulum. ISBN:0198547684 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insecticide stimulus. Insecticides are chemicals used to kill insects. biological_process insecticide resistance insecticide susceptibility/resistance GO:0017085 response to insecticide GO:0017085 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insecticide stimulus. Insecticides are chemicals used to kill insects. GOC:curators A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a nucleolus, a small, dense body one or more of which are present in the nucleus of eukaryotic cells. nucleolus biogenesis nucleolus assembly biological_process GO:0017126 nucleologenesis GO:0017126 A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a nucleolus, a small, dense body one or more of which are present in the nucleus of eukaryotic cells. GOC:jl ISBN:0198506732 nucleolus assembly GOC:mah The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types. stem cell renewal biological_process GO:0017145 stem cell division GO:0017145 The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types. GOC:jid ISBN:0582227089 Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA. GO:0016478 down regulation of protein biosynthetic process down-regulation of protein biosynthetic process downregulation of protein biosynthetic process negative regulation of protein anabolism negative regulation of protein biosynthesis negative regulation of protein biosynthetic process negative regulation of protein formation negative regulation of protein synthesis inhibition of protein biosynthetic process biological_process protein biosynthesis inhibitor activity protein biosynthetic process inhibitor activity GO:0017148 negative regulation of translation GO:0017148 Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA. GOC:isa_complete Any process that modulates the frequency, rate or extent of exocytosis. biological_process GO:0017157 regulation of exocytosis GO:0017157 Any process that modulates the frequency, rate or extent of exocytosis. GOC:go_curators The chemical reactions and pathways involving a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring. UM-BBD_pathwayID:phe carbolic acid metabolic process carbolic acid metabolism hydroxybenzene metabolic process hydroxybenzene metabolism phenol-containing compound metabolism biological_process GO:0018958 Note that phenol metabolism is not included as a child of 'xenobiotic metabolism' because although it is synthesized industrially, phenol is also found naturally in animal wastes and other organic materials. It is often formed by the activity of microorganisms, which can chemically modify a variety of xenobiotic and naturally occurring phenolic compounds. phenol-containing compound metabolic process GO:0018958 The chemical reactions and pathways involving a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring. ISBN:0198506732 The specific behavior of an organism that is associated with reproduction. jl 2012-09-19T16:01:37Z GO:0033057 GO:0044704 GO:0044705 reproductive behavior in a multicellular organism reproductive behaviour multi-organism reproductive behavior multicellular organism reproductive behavior biological_process single-organism reproductive behavior GO:0019098 reproductive behavior GO:0019098 The specific behavior of an organism that is associated with reproduction. GOC:jl GOC:pr Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids. Reactome:R-HSA-2426168 Reactome:R-HSA-400206 regulation of lipid metabolism biological_process GO:0019216 regulation of lipid metabolic process GO:0019216 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids. GOC:go_curators Reactome:R-HSA-2426168 Activation of gene expression by SREBF (SREBP) Reactome:R-HSA-400206 Regulation of lipid metabolism by PPARalpha Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving steroids. regulation of steroid metabolism biological_process GO:0019218 regulation of steroid metabolic process GO:0019218 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving steroids. GOC:go_curators Any cellular process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids. regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism biological_process regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process GO:0019219 regulation of nucleobase-containing compound metabolic process GO:0019219 Any cellular process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids. GOC:go_curators regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process GOC:dph GOC:tb Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism. GO:0044246 Reactome:R-HSA-1989781 regulation of metabolism regulation of multicellular organismal metabolic process regulation of organismal metabolic process biological_process GO:0019222 regulation of metabolic process GO:0019222 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism. GOC:go_curators Reactome:R-HSA-1989781 PPARA activates gene expression regulation of organismal metabolic process GOC:tb The neurological system process in which a signal is transmitted through the nervous system by a combination of action potential propagation and synaptic transmission. conduction of nerve impulse signal transmission along a neuron biological_process GO:0019226 transmission of nerve impulse GO:0019226 The neurological system process in which a signal is transmitted through the nervous system by a combination of action potential propagation and synaptic transmission. GOC:curators ISBN:0815316194 conduction of nerve impulse GOC:dph An action potential that occurs in a neuron. biological_process generation of action potential GO:0019228 neuronal action potential GO:0019228 An action potential that occurs in a neuron. GOC:dph GOC:isa_complete GOC:tb generation of action potential GOC:dph GOC:tb The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. A painful stimulus is any physical or chemical event that has the potential to cause tissue damage (actual or perceived) and activates the nociceptive system. Wikipedia:Nociception perception of physiological pain biological_process nociception GO:0019233 sensory perception of pain GO:0019233 The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. A painful stimulus is any physical or chemical event that has the potential to cause tissue damage (actual or perceived) and activates the nociceptive system. GOC:curators The chemical reactions and pathways resulting in the formation of acetate, the anion of acetic acid. acetate anabolism acetate biosynthesis acetate formation acetate synthesis biological_process GO:0019413 acetate biosynthetic process GO:0019413 The chemical reactions and pathways resulting in the formation of acetate, the anion of acetic acid. GOC:go_curators The chemical reactions and pathways involving a protein. Includes protein modification. GO:0006411 GO:0044267 GO:0044268 Reactome:R-HSA-392499 Wikipedia:Protein_metabolism cellular protein metabolic process cellular protein metabolism protein metabolic process and modification protein metabolism protein metabolism and modification multicellular organismal protein metabolic process biological_process GO:0019538 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. protein metabolic process GO:0019538 The chemical reactions and pathways involving a protein. Includes protein modification. GOC:ma Reactome:R-HSA-392499 Metabolism of proteins Any process involved in the maintenance of an internal steady state at the level of the cell. biological_process GO:0019725 cellular homeostasis GO:0019725 Any process involved in the maintenance of an internal steady state at the level of the cell. GOC:isa_complete GOC:jl ISBN:0395825172 The chemical reactions and pathways resulting in many of the chemical changes of compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon. In multicellular organisms secondary metabolism is generally carried out in specific cell types, and may be useful for the organism as a whole. In unicellular organisms, secondary metabolism is often used for the production of antibiotics or for the utilization and acquisition of unusual nutrients. Wikipedia:Secondary_metabolism secondary metabolism secondary metabolite metabolic process secondary metabolite metabolism biological_process GO:0019748 secondary metabolic process GO:0019748 The chemical reactions and pathways resulting in many of the chemical changes of compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon. In multicellular organisms secondary metabolism is generally carried out in specific cell types, and may be useful for the organism as a whole. In unicellular organisms, secondary metabolism is often used for the production of antibiotics or for the utilization and acquisition of unusual nutrients. GOC:go_curators The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-). Reactome:R-HSA-389661 carboxylic acid metabolism biological_process GO:0019752 carboxylic acid metabolic process GO:0019752 The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-). ISBN:0198506732 Reactome:R-HSA-389661 Glyoxylate metabolism and glycine degradation The directed movement of one-carbon compounds into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. one carbon compound transport biological_process GO:0019755 one-carbon compound transport GO:0019755 The directed movement of one-carbon compounds into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites. cellular_component GO:0019867 outer membrane GO:0019867 The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites. GOC:go_curators A type of reproduction that combines the genetic material of two gametes (such as a sperm or egg cell or fungal spores). The gametes have an haploid genome (with a single set of chromosomes, the product of a meiotic division) and combines with one another to produce a zygote (diploid). Wikipedia:Sexual_reproduction biological_process GO:0019953 Note that gametes may come from two organisms or from a single organism in the case of self-fertilizing hermaphrodites, e.g. C. elegans, or self-fertilization in plants. Note also that sexual reproduction may be seen as the regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times. sexual reproduction GO:0019953 A type of reproduction that combines the genetic material of two gametes (such as a sperm or egg cell or fungal spores). The gametes have an haploid genome (with a single set of chromosomes, the product of a meiotic division) and combines with one another to produce a zygote (diploid). Wikipedia:Sexual_reproduction The formation of the prechordal plate. The prechordal plate is a thickening of the endoderm at the cranial end of the primitive streak formed by the involution of Spemann's organizer cells. The prechordal plate and the notochord induce the formation of the neural plate from the overlying ectodermal cells. biological_process GO:0021501 prechordal plate formation GO:0021501 The formation of the prechordal plate. The prechordal plate is a thickening of the endoderm at the cranial end of the primitive streak formed by the involution of Spemann's organizer cells. The prechordal plate and the notochord induce the formation of the neural plate from the overlying ectodermal cells. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process whose specific outcome is the progression of the spinal cord over time, from its formation to the mature structure. The spinal cord primarily conducts sensory and motor nerve impulses between the brain and the peripheral nervous tissues. biological_process GO:0021510 spinal cord development GO:0021510 The process whose specific outcome is the progression of the spinal cord over time, from its formation to the mature structure. The spinal cord primarily conducts sensory and motor nerve impulses between the brain and the peripheral nervous tissues. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of ventral spinal cord interneurons. Ventral spinal cord interneurons are cells located in the ventral portion of the spinal cord that transmit signals between sensory and motor neurons and are required for reflexive responses. Differentiation includes the processes involved in commitment of a cell to a specific fate. biological_process GO:0021514 ventral spinal cord interneuron differentiation GO:0021514 The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of ventral spinal cord interneurons. Ventral spinal cord interneurons are cells located in the ventral portion of the spinal cord that transmit signals between sensory and motor neurons and are required for reflexive responses. Differentiation includes the processes involved in commitment of a cell to a specific fate. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:11262869 The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the spinal cord. Differentiation includes the processes involved in commitment of a cell to a specific fate. biological_process GO:0021515 cell differentiation in spinal cord GO:0021515 The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the spinal cord. Differentiation includes the processes involved in commitment of a cell to a specific fate. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:11262869 The process whose specific outcome is the progression of the ventral region of the spinal cord over time, from its formation to the mature structure. The neurons of the ventral region of the mature spinal cord participate in motor output. biological_process GO:0021517 ventral spinal cord development GO:0021517 The process whose specific outcome is the progression of the ventral region of the spinal cord over time, from its formation to the mature structure. The neurons of the ventral region of the mature spinal cord participate in motor output. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process in which neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of motor neurons. Motor neurons innervate an effector (muscle or glandular) tissue and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate. biological_process GO:0021522 spinal cord motor neuron differentiation GO:0021522 The process in which neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of motor neurons. Motor neurons innervate an effector (muscle or glandular) tissue and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:11262869 The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of somatic motor neurons. Somatic motor neurons innervate skeletal muscle targets and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate. biological_process GO:0021523 somatic motor neuron differentiation GO:0021523 The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of somatic motor neurons. Somatic motor neurons innervate skeletal muscle targets and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:11262869 The regionalization process that regulates the coordinated growth that establishes the non-random spatial arrangement of the neural tube. biological_process GO:0021532 neural tube patterning GO:0021532 The regionalization process that regulates the coordinated growth that establishes the non-random spatial arrangement of the neural tube. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mature cells of the hindbrain. Differentiation includes the processes involved in commitment of a cell to a specific fate. biological_process GO:0021533 cell differentiation in hindbrain GO:0021533 The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mature cells of the hindbrain. Differentiation includes the processes involved in commitment of a cell to a specific fate. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The multiplication or reproduction of cells, resulting in the expansion of a cell population in the hindbrain. biological_process GO:0021534 cell proliferation in hindbrain GO:0021534 The multiplication or reproduction of cells, resulting in the expansion of a cell population in the hindbrain. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The orderly movement of a cell that will reside in the hindbrain. biological_process GO:0021535 cell migration in hindbrain GO:0021535 The orderly movement of a cell that will reside in the hindbrain. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process whose specific outcome is the progression of the diencephalon over time, from its formation to the mature structure. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex. biological_process GO:0021536 diencephalon development GO:0021536 The process whose specific outcome is the progression of the diencephalon over time, from its formation to the mature structure. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived. cerebrum development biological_process GO:0021537 telencephalon development GO:0021537 The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:12626695 cerebrum development GOC:sl PMID:22331407 The process whose specific outcome is the progression of the pallium over time, from its formation to the mature structure. The pallium is the roof region of the telencephalon. biological_process GO:0021543 pallium development GO:0021543 The process whose specific outcome is the progression of the pallium over time, from its formation to the mature structure. The pallium is the roof region of the telencephalon. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:12626695 The process whose specific outcome is the progression of the cranial nerves over time, from its formation to the mature structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions. biological_process GO:0021545 cranial nerve development GO:0021545 The process whose specific outcome is the progression of the cranial nerves over time, from its formation to the mature structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process whose specific outcome is the progression of the rhombomere over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. biological_process GO:0021546 rhombomere development GO:0021546 The process whose specific outcome is the progression of the rhombomere over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The regionalization process that gives rise to the midbrain-hindbrain boundary. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate. MHB biosynthesis MHB formation midbrain-hindbrain boundary biosynthesis midbrain-hindbrain boundary formation biological_process isthmus biosynthesis isthmus formation GO:0021547 midbrain-hindbrain boundary initiation GO:0021547 The regionalization process that gives rise to the midbrain-hindbrain boundary. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate. GOC:cls GOC:dgh GOC:dph GOC:isa_complete GOC:jid GO_REF:0000021 PMID:15541513 MHB biosynthesis GOC:cls MHB formation GOC:cls midbrain-hindbrain boundary biosynthesis GOC:cls midbrain-hindbrain boundary formation GOC:cls isthmus biosynthesis GOC:cls isthmus formation GOC:cls The process whose specific outcome is the progression of the pons over time, from its formation to the mature structure. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum. biological_process GO:0021548 pons development GO:0021548 The process whose specific outcome is the progression of the pons over time, from its formation to the mature structure. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process whose specific outcome is the progression of the medulla oblongata over time, from its formation to the mature structure. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate. biological_process medulla development myelencephalon development GO:0021550 medulla oblongata development GO:0021550 The process whose specific outcome is the progression of the medulla oblongata over time, from its formation to the mature structure. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 medulla development GOC:cls myelencephalon development GOC:cls The process in which the anatomical structure of the central nervous system is generated and organized. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord. biological_process GO:0021551 central nervous system morphogenesis GO:0021551 The process in which the anatomical structure of the central nervous system is generated and organized. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0582227089 The process in which the anatomical structure of the midbrain-hindbrain boundary is generated and organized. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate. MHB morphogenesis isthmus morphogenesis biological_process GO:0021555 midbrain-hindbrain boundary morphogenesis GO:0021555 The process in which the anatomical structure of the midbrain-hindbrain boundary is generated and organized. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:15541513 MHB morphogenesis GOC:cls isthmus morphogenesis GOC:cls The process that gives rise to the central nervous system. This process pertains to the initial formation of a structure from unspecified parts. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord. biological_process GO:0021556 central nervous system formation GO:0021556 The process that gives rise to the central nervous system. This process pertains to the initial formation of a structure from unspecified parts. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0582227089 The process whose specific outcome is the progression of the trigeminal nerve over time, from its formation to the mature structure. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae. cranial nerve 5 development cranial nerve V development biological_process CN V development GO:0021559 trigeminal nerve development GO:0021559 The process whose specific outcome is the progression of the trigeminal nerve over time, from its formation to the mature structure. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 cranial nerve 5 development GOC:cls cranial nerve V development GOC:cls CN V development GOC:cls Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion. cranial nerve 9 development cranial nerve IX development biological_process CN IX development GO:0021563 glossopharyngeal nerve development GO:0021563 Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 cranial nerve 9 development GOC:cls cranial nerve IX development GOC:cls CN IX development GOC:cls The process whose specific outcome is the progression of the vagus nerve over time, from its formation to the mature structure. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis. cranial nerve X development biological_process CN X development cranial nerve 10 development GO:0021564 vagus nerve development GO:0021564 The process whose specific outcome is the progression of the vagus nerve over time, from its formation to the mature structure. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 cranial nerve X development GOC:cls CN X development GOC:cls cranial nerve 10 development GOC:cls The process whose specific outcome is the progression of the accessory nerve over time, from its formation to the mature structure. In mice, the spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve. cranial nerve XI development spinal accessory nerve development biological_process CN XI development cranial nerve 11 development GO:0021565 accessory nerve development GO:0021565 The process whose specific outcome is the progression of the accessory nerve over time, from its formation to the mature structure. In mice, the spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 cranial nerve XI development GOC:cls spinal accessory nerve development PMID:11533729 CN XI development GOC:cls cranial nerve 11 development GOC:cls The process whose specific outcome is the progression of the hypoglossal nerve over time, from its formation to the mature structure. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue. cranial nerve XII development biological_process CN XII development cranial nerve 12 development GO:0021566 hypoglossal nerve development GO:0021566 The process whose specific outcome is the progression of the hypoglossal nerve over time, from its formation to the mature structure. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 cranial nerve XII development GOC:cls CN XII development GOC:cls cranial nerve 12 development GOC:cls The process in which the anatomical structure of the hindbrain is generated and organized. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions. biological_process rhombencephalon morphogenesis GO:0021575 hindbrain morphogenesis GO:0021575 The process in which the anatomical structure of the hindbrain is generated and organized. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process that gives rise to the hindbrain. This process pertains to the initial formation of a structure from unspecified parts. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions. biological_process GO:0021576 hindbrain formation GO:0021576 The process that gives rise to the hindbrain. This process pertains to the initial formation of a structure from unspecified parts. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 A developmental process, independent of morphogenetic (shape) change, that is required for the hindbrain to attain its fully functional state. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions. biological_process GO:0021578 hindbrain maturation GO:0021578 A developmental process, independent of morphogenetic (shape) change, that is required for the hindbrain to attain its fully functional state. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process in which the anatomical structure of the medulla oblongata is generated and organized. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate. biological_process medulla morphogenesis myelencephalon morphogenesis GO:0021579 medulla oblongata morphogenesis GO:0021579 The process in which the anatomical structure of the medulla oblongata is generated and organized. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process that gives rise to the medulla oblongata. This process pertains to the initial formation of a structure from unspecified parts. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate. biological_process medulla biosynthesis medulla formation myelencephalon biosynthesis myelencephalon formation GO:0021580 medulla oblongata formation GO:0021580 The process that gives rise to the medulla oblongata. This process pertains to the initial formation of a structure from unspecified parts. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 A developmental process, independent of morphogenetic (shape) change, that is required for the medulla oblongata to attain its fully functional state. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate. biological_process medulla maturation myelencephalon maturation GO:0021582 medulla oblongata maturation GO:0021582 A developmental process, independent of morphogenetic (shape) change, that is required for the medulla oblongata to attain its fully functional state. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process in which the anatomical structure of the pons is generated and organized. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum. biological_process GO:0021583 pons morphogenesis GO:0021583 The process in which the anatomical structure of the pons is generated and organized. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process that gives rise to the pons. This process pertains to the initial formation of a structure from unspecified parts. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum. biological_process GO:0021584 pons formation GO:0021584 The process that gives rise to the pons. This process pertains to the initial formation of a structure from unspecified parts. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 A developmental process, independent of morphogenetic (shape) change, that is required for the pons to attain its fully functional state. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum. biological_process GO:0021586 pons maturation GO:0021586 A developmental process, independent of morphogenetic (shape) change, that is required for the pons to attain its fully functional state. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process in which the anatomical structure of the rhombomere is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. biological_process GO:0021593 rhombomere morphogenesis GO:0021593 The process in which the anatomical structure of the rhombomere is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process that gives rise to the rhombomere. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. biological_process GO:0021594 rhombomere formation GO:0021594 The process that gives rise to the rhombomere. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process in which the anatomical structure of the cranial nerves are generated and organized. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions. biological_process GO:0021602 cranial nerve morphogenesis GO:0021602 The process in which the anatomical structure of the cranial nerves are generated and organized. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process that gives rise to the cranial nerves. This process pertains to the initial formation of a structure from unspecified parts. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions. biological_process GO:0021603 cranial nerve formation GO:0021603 The process that gives rise to the cranial nerves. This process pertains to the initial formation of a structure from unspecified parts. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 A developmental process, independent of morphogenetic (shape) change, that is required for a cranial nerve to attain its fully functional state. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions. biological_process GO:0021605 cranial nerve maturation GO:0021605 A developmental process, independent of morphogenetic (shape) change, that is required for a cranial nerve to attain its fully functional state. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 A developmental process, independent of morphogenetic (shape) change, that is required for the accessory nerve to attain its fully functional state. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve. biological_process CN XI maturation spinal accessory nerve maturation GO:0021606 accessory nerve maturation GO:0021606 A developmental process, independent of morphogenetic (shape) change, that is required for the accessory nerve to attain its fully functional state. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process in which the anatomical structure of the accessory nerve is generated and organized. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve. biological_process CN XI morphogenesis GO:0021607 accessory nerve morphogenesis GO:0021607 The process in which the anatomical structure of the accessory nerve is generated and organized. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process that gives rise to the accessory nerve. This process pertains to the initial formation of a structure from unspecified parts. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve. biological_process CN XI biosynthesis CN XI formation GO:0021608 accessory nerve formation GO:0021608 The process that gives rise to the accessory nerve. This process pertains to the initial formation of a structure from unspecified parts. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 A developmental process, independent of morphogenetic (shape) change, that is required for the glossopharyngeal nerve to attain its fully functional state. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion. biological_process CN IX maturation GO:0021614 glossopharyngeal nerve maturation GO:0021614 A developmental process, independent of morphogenetic (shape) change, that is required for the glossopharyngeal nerve to attain its fully functional state. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process in which the anatomical structure of the glossopharyngeal nerve is generated and organized. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion. biological_process CN IX morphogenesis GO:0021615 glossopharyngeal nerve morphogenesis GO:0021615 The process in which the anatomical structure of the glossopharyngeal nerve is generated and organized. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process that gives rise to the glossopharyngeal nerve. This process pertains to the initial formation of a structure from unspecified parts. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion. biological_process CN IX biosynthesis CN IX formation GO:0021616 glossopharyngeal nerve formation GO:0021616 The process that gives rise to the glossopharyngeal nerve. This process pertains to the initial formation of a structure from unspecified parts. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process in which the anatomical structure of the hypoglossal nerve is generated and organized. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue. biological_process CN XII morphogenesis GO:0021618 hypoglossal nerve morphogenesis GO:0021618 The process in which the anatomical structure of the hypoglossal nerve is generated and organized. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 A developmental process, independent of morphogenetic (shape) change, that is required for the hypoglossal nerve to attain its fully functional state. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue. biological_process CN XII maturation GO:0021619 hypoglossal nerve maturation GO:0021619 A developmental process, independent of morphogenetic (shape) change, that is required for the hypoglossal nerve to attain its fully functional state. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process that gives rise to the hypoglossal nerve. This process pertains to the initial formation of a structure from unspecified parts. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue. biological_process CN XII biosynthesis CN XII formation GO:0021620 hypoglossal nerve formation GO:0021620 The process that gives rise to the hypoglossal nerve. This process pertains to the initial formation of a structure from unspecified parts. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 A developmental process, independent of morphogenetic (shape) change, that is required for the central nervous system to attain its fully functional state. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord. biological_process GO:0021626 central nervous system maturation GO:0021626 A developmental process, independent of morphogenetic (shape) change, that is required for the central nervous system to attain its fully functional state. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0582227089 A developmental process, independent of morphogenetic (shape) change, that is required for the trigeminal nerve to attain its fully functional state. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae. biological_process CN V maturation GO:0021635 trigeminal nerve maturation GO:0021635 A developmental process, independent of morphogenetic (shape) change, that is required for the trigeminal nerve to attain its fully functional state. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process in which the anatomical structure of the trigeminal nerve is generated and organized. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae. biological_process CN V morphogenesis GO:0021636 trigeminal nerve morphogenesis GO:0021636 The process in which the anatomical structure of the trigeminal nerve is generated and organized. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process that gives rise to the trigeminal nerve. This process pertains to the initial formation of a structure from unspecified parts. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae. biological_process CN V biosynthesis CN V formation GO:0021638 trigeminal nerve formation GO:0021638 The process that gives rise to the trigeminal nerve. This process pertains to the initial formation of a structure from unspecified parts. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 A developmental process, independent of morphogenetic (shape) change, that is required for the vagus nerve to attain its fully functional state. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis. biological_process CN X maturation GO:0021643 vagus nerve maturation GO:0021643 A developmental process, independent of morphogenetic (shape) change, that is required for the vagus nerve to attain its fully functional state. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process in which the anatomical structure of the vagus nerve is generated and organized. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis. biological_process CN X morphogenesis GO:0021644 vagus nerve morphogenesis GO:0021644 The process in which the anatomical structure of the vagus nerve is generated and organized. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process that gives rise to the vagus nerve. This process pertains to the initial formation of a structure from unspecified parts. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis. biological_process CN X biosynthesis CN X formation GO:0021646 vagus nerve formation GO:0021646 The process that gives rise to the vagus nerve. This process pertains to the initial formation of a structure from unspecified parts. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process that gives rise to a rhombomere boundary. This process pertains to the initial formation of a boundary delimiting a rhombomere. Rhombomeres are transverse segments of the developing rhombencephalon that are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order. biological_process GO:0021654 rhombomere boundary formation GO:0021654 The process that gives rise to a rhombomere boundary. This process pertains to the initial formation of a boundary delimiting a rhombomere. Rhombomeres are transverse segments of the developing rhombencephalon that are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure. biological_process GO:0021675 nerve development GO:0021675 The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 A developmental process, independent of morphogenetic (shape) change, that is required for a nerve to attain its fully functional state. biological_process GO:0021682 nerve maturation GO:0021682 A developmental process, independent of morphogenetic (shape) change, that is required for a nerve to attain its fully functional state. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 A developmental process, independent of morphogenetic (shape) change, that is required for an anatomical structure, cell or cellular component to attain its fully functional state. biological_process GO:0021700 developmental maturation GO:0021700 A developmental process, independent of morphogenetic (shape) change, that is required for an anatomical structure, cell or cellular component to attain its fully functional state. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process whose specific outcome is the progression of the locus ceruleus over time, from its formation to the mature structure. The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic. locus caeruleus development locus coeruleus development biological_process GO:0021703 locus ceruleus development GO:0021703 The process whose specific outcome is the progression of the locus ceruleus over time, from its formation to the mature structure. The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process in which the anatomical structure of the locus ceruleus is generated and organized. In mice, the locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic. biological_process GO:0021704 locus ceruleus morphogenesis GO:0021704 The process in which the anatomical structure of the locus ceruleus is generated and organized. In mice, the locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process that gives rise to the locus ceruleus. This process pertains to the initial formation of a structure from unspecified parts. In mice, the locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic. biological_process GO:0021705 locus ceruleus formation GO:0021705 The process that gives rise to the locus ceruleus. This process pertains to the initial formation of a structure from unspecified parts. In mice, the locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 A developmental process, independent of morphogenetic (shape) change, that is required for the locus ceruleus to attain its fully functional state. The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic. biological_process GO:0021706 locus ceruleus maturation GO:0021706 A developmental process, independent of morphogenetic (shape) change, that is required for the locus ceruleus to attain its fully functional state. The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process whose specific outcome is the progression of the superior olivary nucleus over time, from its formation to the mature structure. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound. biological_process superior olive development GO:0021718 superior olivary nucleus development GO:0021718 The process whose specific outcome is the progression of the superior olivary nucleus over time, from its formation to the mature structure. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process in which the anatomical structure of the superior olivary nucleus is generated and organized. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound. biological_process superior olive morphogenesis GO:0021719 superior olivary nucleus morphogenesis GO:0021719 The process in which the anatomical structure of the superior olivary nucleus is generated and organized. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 The process that gives rise to the superior olivary nucleus. This process pertains to the initial formation of a structure from unspecified parts. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound. biological_process GO:0021720 superior olivary nucleus formation GO:0021720 The process that gives rise to the superior olivary nucleus. This process pertains to the initial formation of a structure from unspecified parts. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 A developmental process, independent of morphogenetic (shape) change, that is required for the superior olivary nucleus to attain its fully functional state. The superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound. biological_process superior olive maturation GO:0021722 superior olivary nucleus maturation GO:0021722 A developmental process, independent of morphogenetic (shape) change, that is required for the superior olivary nucleus to attain its fully functional state. The superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0838580343 A developmental process, independent of morphogenetic (shape) change, that is required for the midbrain-hindbrain boundary to attain its fully functional state. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate. biological_process MHB maturation isthmus maturation GO:0021732 midbrain-hindbrain boundary maturation GO:0021732 A developmental process, independent of morphogenetic (shape) change, that is required for the midbrain-hindbrain boundary to attain its fully functional state. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:15541513 The process whose specific outcome is the progression of the hypoglossal nucleus over time, from its formation to the mature structure. biological_process GO:0021743 hypoglossal nucleus development GO:0021743 The process whose specific outcome is the progression of the hypoglossal nucleus over time, from its formation to the mature structure. GOC:cls GOC:curators GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process whose specific outcome is the progression of a salivary nucleus over time, from its formation to the mature structure. biological_process GO:0021751 salivary nucleus development GO:0021751 The process whose specific outcome is the progression of a salivary nucleus over time, from its formation to the mature structure. GOC:cls GOC:curators GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process whose specific outcome is the progression of the superior salivary nucleus over time, from its formation to the mature structure. biological_process GO:0021753 superior salivary nucleus development GO:0021753 The process whose specific outcome is the progression of the superior salivary nucleus over time, from its formation to the mature structure. GOC:cls GOC:curators GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process aimed at the progression of a glial cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. biological_process GO:0021782 glial cell development GO:0021782 The process aimed at the progression of a glial cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process whose specific outcome is the progression of a preganglionic parasympathetic fiber over time, from its formation to the mature structure. A preganglionic parasympathetic fiber is a cholinergic axonal fiber projecting from the CNS to a parasympathetic ganglion. biological_process GO:0021783 preganglionic parasympathetic fiber development GO:0021783 The process whose specific outcome is the progression of a preganglionic parasympathetic fiber over time, from its formation to the mature structure. A preganglionic parasympathetic fiber is a cholinergic axonal fiber projecting from the CNS to a parasympathetic ganglion. GOC:cjm GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The orderly movement of cells from one site to another in the cerebral cortex. biological_process GO:0021795 cerebral cortex cell migration GO:0021795 The orderly movement of cells from one site to another in the cerebral cortex. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The migration of cells in the developing cerebral cortex in which cells move from the ventricular and/or subventricular zone toward the surface of the brain. biological_process GO:0021799 cerebral cortex radially oriented cell migration GO:0021799 The migration of cells in the developing cerebral cortex in which cells move from the ventricular and/or subventricular zone toward the surface of the brain. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:12626695 The radial migration of neuronal or glial precursor cells along radial glial cells during the development of the cerebral cortex. cerebral cortex radial glia guided migration cerebral cortex radial glia-dependent cell migration biological_process glial-guided locomotion GO:0021801 cerebral cortex radial glia-guided migration GO:0021801 The radial migration of neuronal or glial precursor cells along radial glial cells during the development of the cerebral cortex. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:12626695 glial-guided locomotion PMID:12626695 The movement of a cell along the process of a radial glial cell involved in cerebral cortex glial-mediated radial migration. cell locomotion involved in cerebral cortex glial-mediated radial migration biological_process cell locomotion involved in cerebral cortex radial glia guided migration GO:0021814 cell motility involved in cerebral cortex radial glia guided migration GO:0021814 The movement of a cell along the process of a radial glial cell involved in cerebral cortex glial-mediated radial migration. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:12626695 cell locomotion involved in cerebral cortex glial-mediated radial migration GOC:dph cell locomotion involved in cerebral cortex radial glia guided migration GOC:dph Rearrangements of the microtubule cytoskeleton that contribute to the movement of cells along radial glial cells as a component of the process of cerebral cortex glial-mediated radial migration. modulation of microtubule cytoskeleton involved in cerebral cortex glial-mediated radial migration biological_process GO:0021815 modulation of microtubule cytoskeleton involved in cerebral cortex radial glia guided migration GO:0021815 Rearrangements of the microtubule cytoskeleton that contribute to the movement of cells along radial glial cells as a component of the process of cerebral cortex glial-mediated radial migration. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:12626695 modulation of microtubule cytoskeleton involved in cerebral cortex glial-mediated radial migration GOC:dph The detachment of cells from radial glial fibers at the appropriate time when they cease to migrate and form distinct layer in the cerebral cortex. biological_process cerebral cortex lamination GO:0021819 layer formation in cerebral cortex GO:0021819 The detachment of cells from radial glial fibers at the appropriate time when they cease to migrate and form distinct layer in the cerebral cortex. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:12626695 cerebral cortex lamination PMID:12626695 The intracellular signaling pathway that results in the cessation of cell movement involved in lamination of the cerebral cortex. down regulation of cell locomotion involved in cerebral cortex glial-mediated radial cell migration down-regulation of cell locomotion involved in cerebral cortex glial-mediated radial cell migration downregulation of cell locomotion involved in cerebral cortex glial-mediated radial cell migration negative regulation of cell locomotion involved in cerebral cortex glial-mediated radial migration inhibition of cell locomotion involved in cerebral cortex glial-mediated radial cell migration biological_process negative regulation of cell locomotion involved in cerebral cortex radial glia guided migration GO:0021822 negative regulation of cell motility involved in cerebral cortex radial glia guided migration GO:0021822 The intracellular signaling pathway that results in the cessation of cell movement involved in lamination of the cerebral cortex. GOC:cls GOC:dgh GOC:dph GOC:jid GOC:tb GO_REF:0000021 PMID:12626695 negative regulation of cell locomotion involved in cerebral cortex glial-mediated radial migration GOC:dph negative regulation of cell locomotion involved in cerebral cortex radial glia guided migration GOC:dph GOC:tb The creation of greater cell numbers in the forebrain due to cell division of progenitor cells. biological_process GO:0021846 cell proliferation in forebrain GO:0021846 The creation of greater cell numbers in the forebrain due to cell division of progenitor cells. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The migration of a pyramidal neuron precursor from the ventricular zone to the correct layer of the cerebral cortex. pyramidal neuron migration biological_process projection neuron migration GO:0021852 pyramidal neuron migration to cerebral cortex GO:0021852 The migration of a pyramidal neuron precursor from the ventricular zone to the correct layer of the cerebral cortex. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:12626695 PMID:22192824 projection neuron migration PMID:12626695 The process in which a neuroblast or one of its progeny commits to a pyramidal neuron fate, migrates from the ventricular zone to the appropriate layer in the cortex and develops into a mature neuron. projection neuron differentiation biological_process GO:0021859 pyramidal neuron differentiation GO:0021859 The process in which a neuroblast or one of its progeny commits to a pyramidal neuron fate, migrates from the ventricular zone to the appropriate layer in the cortex and develops into a mature neuron. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 projection neuron differentiation PMID:16226447 The progression of a pyramidal neuron from its initial formation to its mature state. projection neuron development biological_process GO:0021860 pyramidal neuron development GO:0021860 The progression of a pyramidal neuron from its initial formation to its mature state. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 projection neuron development PMID:16226447 The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of basal progenitor cells, neuroblasts that lose their contacts with the ventricular surface. Differentiation includes the processes involved in commitment of a cell to a specific fate. abventricular progenitor cell differentiation intermediate progenitor cell differentiation non-surface dividing progenitor cell differentiation biological_process GO:0021863 forebrain neuroblast differentiation GO:0021863 The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of basal progenitor cells, neuroblasts that lose their contacts with the ventricular surface. Differentiation includes the processes involved in commitment of a cell to a specific fate. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:16226447 abventricular progenitor cell differentiation PMID:16226447 intermediate progenitor cell differentiation PMID:16226447 non-surface dividing progenitor cell differentiation PMID:16226447 The process in which nerve cells are generated in the forebrain. This includes the production of neuroblasts from and their differentiation into neurons. generation of neurons in forebrain biological_process GO:0021872 forebrain generation of neurons GO:0021872 The process in which nerve cells are generated in the forebrain. This includes the production of neuroblasts from and their differentiation into neurons. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process in which a relatively unspecialized cell acquires specialized features of a neuron that will reside in the forebrain. biological_process GO:0021879 forebrain neuron differentiation GO:0021879 The process in which a relatively unspecialized cell acquires specialized features of a neuron that will reside in the forebrain. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:16226447 The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell. biological_process GO:0021884 forebrain neuron development GO:0021884 The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The orderly movement of a cell from one site to another at least one of which is located in the forebrain. biological_process GO:0021885 forebrain cell migration GO:0021885 The orderly movement of a cell from one site to another at least one of which is located in the forebrain. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process in which a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex. biological_process GO:0021895 cerebral cortex neuron differentiation GO:0021895 The process in which a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process in which the neural tube is divided into specific regions along the rostrocaudal axis. biological_process anterior-posterior neural tube patterning GO:0021903 rostrocaudal neural tube patterning GO:0021903 The process in which the neural tube is divided into specific regions along the rostrocaudal axis. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:11262869 anterior-posterior neural tube patterning GOC:dph The process whose specific outcome is the creation of the forebrain-midbrain boundary. biological_process GO:0021905 forebrain-midbrain boundary formation GO:0021905 The process whose specific outcome is the creation of the forebrain-midbrain boundary. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:11262869 The process whose specific outcome is the formation of the hindbrain-spinal cord boundary. biological_process GO:0021906 hindbrain-spinal cord boundary formation GO:0021906 The process whose specific outcome is the formation of the hindbrain-spinal cord boundary. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:11262869 The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium. biological_process GO:0021915 neural tube development GO:0021915 The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system. biological_process GO:0021953 central nervous system neuron differentiation GO:0021953 The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron. biological_process GO:0021954 central nervous system neuron development GO:0021954 The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon. corticogenesis biological_process neocortex development GO:0021987 cerebral cortex development GO:0021987 The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 corticogenesis GOC:bf PMID:25904839 neocortex development GOC:dph The formation of the flat, thickened layer of ectodermal cells known as the neural plate. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system. biological_process GO:0021990 neural plate formation GO:0021990 The formation of the flat, thickened layer of ectodermal cells known as the neural plate. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 ISBN:0878932437 ISBN:0878932585 PMID:15806586 The process that regulates the coordinated growth and differentiation that establishes the non-random anterior-posterior spatial arrangement of the neural plate. biological_process neural plate anterior/posterior pattern formation GO:0021999 neural plate anterior/posterior regionalization GO:0021999 The process that regulates the coordinated growth and differentiation that establishes the non-random anterior-posterior spatial arrangement of the neural plate. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 neural plate anterior/posterior pattern formation GOC:dph Generation of cells within the nervous system. Wikipedia:Neurogenesis biological_process neural cell differentiation GO:0022008 neurogenesis GO:0022008 Generation of cells within the nervous system. GOC:cls GOC:curators GOC:dgh GOC:dph GOC:jid GO_REF:0000021 neural cell differentiation GOC:BHF GOC:dph The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes in the central nervous system. The capillary endothelial cells in the brain are specialized to form the blood-brain barrier. biological_process GO:0022009 central nervous system vasculogenesis GO:0022009 The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes in the central nervous system. The capillary endothelial cells in the brain are specialized to form the blood-brain barrier. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier. myelination in central nervous system biological_process GO:0022010 central nervous system myelination GO:0022010 The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier. peripheral nervous system myelination biological_process GO:0022011 myelination in peripheral nervous system GO:0022011 The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The orderly movement of a cell from one site to another at least one of which is located in the telencephalon. biological_process GO:0022029 telencephalon cell migration GO:0022029 The orderly movement of a cell from one site to another at least one of which is located in the telencephalon. GOC:cls GOC:curators GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The orderly movement of glial cells through the telencephalon. biological_process GO:0022030 telencephalon glial cell migration GO:0022030 The orderly movement of glial cells through the telencephalon. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The multiplication or reproduction of telencephalon oligodendrocyte cells, resulting in the expansion of a cell population. biological_process GO:0022032 telencephalon oligodendrocyte cell migration GO:0022032 The multiplication or reproduction of telencephalon oligodendrocyte cells, resulting in the expansion of a cell population. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The movement of a cell within a rhombomere. This process is known to occur as an early step in the generation of anatomical structure from a rhombomere. biological_process GO:0022035 rhombomere cell migration GO:0022035 The movement of a cell within a rhombomere. This process is known to occur as an early step in the generation of anatomical structure from a rhombomere. GOC:cls GOC:dgh GOC:dph GOC:jid GO_REF:0000021 PMID:15629700 The process whose specific outcome is the progression of the metencephalon over time, from its formation to the mature structure. biological_process GO:0022037 metencephalon development GO:0022037 The process whose specific outcome is the progression of the metencephalon over time, from its formation to the mature structure. GOC:cls GOC:curators GOC:dgh GOC:dph GOC:jid GO_REF:0000021 The cellular process that ensures successive accurate and complete genome replication and chromosome segregation. biological_process GO:0022402 cell cycle process GO:0022402 The cellular process that ensures successive accurate and complete genome replication and chromosome segregation. GOC:isa_complete GOC:mtg_cell_cycle The initial attachment of a membrane or protein to a target membrane. Docking requires only that the proteins come close enough to interact and adhere. biological_process GO:0022406 membrane docking GO:0022406 The initial attachment of a membrane or protein to a target membrane. Docking requires only that the proteins come close enough to interact and adhere. GOC:isa_complete PMID:27875684 A cellular process that results in the breakdown of a cellular component. GO:0071845 cell structure disassembly cellular component disassembly at cellular level biological_process GO:0022411 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. cellular component disassembly GO:0022411 A cellular process that results in the breakdown of a cellular component. GOC:isa_complete A process, occurring at the cellular level, that is involved in the reproductive function of a multicellular organism. reproductive cellular process in multicellular organism biological_process GO:0022412 cellular process involved in reproduction in multicellular organism GO:0022412 A process, occurring at the cellular level, that is involved in the reproductive function of a multicellular organism. GOC:isa_complete A biological process that directly contributes to the process of producing new individuals by one or two organisms. The new individuals inherit some proportion of their genetic material from the parent or parents. jl 2012-09-19T15:56:06Z GO:0044702 Wikipedia:Reproduction biological_process single organism reproductive process GO:0022414 reproductive process GO:0022414 A biological process that directly contributes to the process of producing new individuals by one or two organisms. The new individuals inherit some proportion of their genetic material from the parent or parents. GOC:dph GOC:isa_complete A physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. biological_process GO:0022600 digestive system process GO:0022600 A physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. GOC:isa_complete GOC:jid GOC:mtg_cardio Any process that modulates the frequency, rate or extent of anatomical structure morphogenesis. regulation of morphogenesis biological_process GO:0022603 regulation of anatomical structure morphogenesis GO:0022603 Any process that modulates the frequency, rate or extent of anatomical structure morphogenesis. GOC:mah Any process that modulates the frequency, rate or extent of cell morphogenesis. Cell morphogenesis is the developmental process in which the shape of a cell is generated and organized. biological_process negative regulation of cell shape and cell size positive regulation of cell shape and cell size regulation of cell shape and cell size GO:0022604 regulation of cell morphogenesis GO:0022604 Any process that modulates the frequency, rate or extent of cell morphogenesis. Cell morphogenesis is the developmental process in which the shape of a cell is generated and organized. GOC:isa_complete negative regulation of cell shape and cell size GOC:dph GOC:tb positive regulation of cell shape and cell size GOC:dph GOC:tb regulation of cell shape and cell size GOC:dph GOC:tb The aggregation, arrangement and bonding together of a cellular component. GO:0071844 cell structure assembly cellular component assembly at cellular level biological_process GO:0022607 cellular component assembly GO:0022607 The aggregation, arrangement and bonding together of a cellular component. GOC:isa_complete The process in which the anatomical structures of a gland are generated and organized. biological_process GO:0022612 gland morphogenesis GO:0022612 The process in which the anatomical structures of a gland are generated and organized. GOC:isa_complete A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a complex containing RNA and proteins. Includes the biosynthesis of the constituent RNA and protein molecules, and those macromolecular modifications that are involved in synthesis or assembly of the ribonucleoprotein complex. RNA-protein complex biogenesis ribonucleoprotein complex biogenesis and assembly biological_process GO:0022613 ribonucleoprotein complex biogenesis GO:0022613 A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a complex containing RNA and proteins. Includes the biosynthesis of the constituent RNA and protein molecules, and those macromolecular modifications that are involved in synthesis or assembly of the ribonucleoprotein complex. GOC:isa_complete GOC:mah RNA-protein complex biogenesis GOC:mah ribonucleoprotein complex biogenesis and assembly GOC:mah A process that results in the breakdown of the extracellular matrix. Reactome:R-HSA-1474228 biological_process GO:0022617 extracellular matrix disassembly GO:0022617 A process that results in the breakdown of the extracellular matrix. GOC:jid Reactome:R-HSA-1474228 Degradation of the extracellular matrix The aggregation, arrangement and bonding together of proteins and RNA molecules to form a ribonucleoprotein complex. RNA-protein complex assembly RNP complex assembly ribonucleoprotein complex assembly biological_process GO:0022618 protein-RNA complex assembly GO:0022618 The aggregation, arrangement and bonding together of proteins and RNA molecules to form a ribonucleoprotein complex. GOC:jl A ribosome located in the cytosol. GO:0005830 GO:0009281 GO:0030871 70S ribosome 80S ribosome cellular_component GO:0022626 cytosolic ribosome GO:0022626 A ribosome located in the cytosol. GOC:mtg_sensu Any process that modulates the frequency, rate or extent of gene expression as a consequence of a process in which a signal is released and/or conveyed from one location to another. 2010-02-16T09:30:50Z biological_process regulation of gene expression as a consequence of signal transmission GO:0023019 signal transduction involved in regulation of gene expression GO:0023019 Any process that modulates the frequency, rate or extent of gene expression as a consequence of a process in which a signal is released and/or conveyed from one location to another. GOC:mtg_signal regulation of gene expression as a consequence of signal transmission GOC:bf Any process that modulates the frequency, rate or extent of a signaling process. 2010-02-16T09:30:50Z biological_process regulation of signaling process regulation of signalling process GO:0023051 regulation of signaling GO:0023051 Any process that modulates the frequency, rate or extent of a signaling process. GOC:mtg_signal regulation of signaling process GOC:bf regulation of signalling process GOC:mah The entirety of a process in which information is transmitted within a biological system. This process begins with an active signal and ends when a cellular response has been triggered. jl 2010-02-16T09:30:50Z GO:0023046 GO:0044700 biological signaling signaling process signalling biological_process signalling process single organism signaling GO:0023052 Note that a signal is any variable property or parameter that serves to convey information, and may be a physical entity such as a gene product or small molecule, a photon, or a change in state such as movement or voltage change. signaling GO:0023052 The entirety of a process in which information is transmitted within a biological system. This process begins with an active signal and ends when a cellular response has been triggered. GOC:mtg_signal GOC:mtg_signaling_feb11 GOC:signaling signalling process GOC:mah Any process that activates, maintains or increases the frequency, rate or extent of a signaling process. 2010-02-16T09:30:50Z positive regulation of signalling process biological_process positive regulation of signaling process GO:0023056 positive regulation of signaling GO:0023056 Any process that activates, maintains or increases the frequency, rate or extent of a signaling process. GOC:mtg_signal positive regulation of signalling process GOC:mah positive regulation of signaling process GOC:bf Any process that stops, prevents, or reduces the frequency, rate or extent of a signaling process. 2010-02-16T09:30:50Z biological_process negative regulation of signaling process negative regulation of signalling process GO:0023057 negative regulation of signaling GO:0023057 Any process that stops, prevents, or reduces the frequency, rate or extent of a signaling process. GOC:mtg_signal negative regulation of signaling process GOC:bf negative regulation of signalling process GOC:mah The process in which a signal is secreted or discharged into the extracellular medium from a cellular source. 2010-02-16T09:30:50Z signal secretion biological_process GO:0023061 signal release GO:0023061 The process in which a signal is secreted or discharged into the extracellular medium from a cellular source. GOC:mtg_signal signal secretion GOC:bf The specification and formation of anisotropic intracellular organization or cell growth patterns. GO:0000283 GO:0030468 cell polarization bud site selection/establishment of cell polarity biological_process GO:0030010 establishment of cell polarity GO:0030010 The specification and formation of anisotropic intracellular organization or cell growth patterns. GOC:mah The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism. Wikipedia:Myofibril cellular_component GO:0030016 myofibril GO:0030016 The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism. ISBN:0815316194 The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs. Wikipedia:Sarcomere cellular_component GO:0030017 sarcomere GO:0030017 The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs. ISBN:0815316194 Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins. biological_process microfilament-based process GO:0030029 actin filament-based process GO:0030029 Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins. GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon. cell projection organisation biological_process cell projection organization and biogenesis cell surface structure organization and biogenesis GO:0030030 cell projection organization GO:0030030 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon. GOC:jl GOC:mah PMID:16318917 cell projection organization and biogenesis GOC:mah cell surface structure organization and biogenesis GOC:mah Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon. formation of a cell surface projection biological_process cell projection biogenesis GO:0030031 cell projection assembly GO:0030031 Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon. GOC:jl GOC:mah PMID:18391171 cell projection biogenesis GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins. actin cytoskeleton organisation biological_process actin cytoskeleton organization and biogenesis actin modulating activity GO:0030036 actin cytoskeleton organization GO:0030036 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins. GOC:dph GOC:jl GOC:mah actin cytoskeleton organization and biogenesis GOC:mah Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins. biological_process GO:0030048 actin filament-based movement GO:0030048 Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins. GOC:BHF GOC:mah Movement of a vesicle along an actin filament, mediated by motor proteins. biological_process GO:0030050 vesicle transport along actin filament GO:0030050 Movement of a vesicle along an actin filament, mediated by motor proteins. GOC:mah A cellular component that forms a specialized region of connection between two or more cells, or between a cell and the extracellular matrix, or between two membrane-bound components of a cell, such as flagella. Wikipedia:Cell_junction cellular_component GO:0030054 cell junction GO:0030054 A cellular component that forms a specialized region of connection between two or more cells, or between a cell and the extracellular matrix, or between two membrane-bound components of a cell, such as flagella. GOC:aruk GOC:bc GOC:mah ISBN:0198506732 PMID:26820516 PMID:28096264 The regulated release of a peptide hormone from a cell. biological_process GO:0030072 peptide hormone secretion GO:0030072 The regulated release of a peptide hormone from a cell. GOC:mah The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates. Wikipedia:Haematopoiesis blood cell biosynthesis blood cell formation haemopoiesis hematopoiesis biological_process GO:0030097 hemopoiesis GO:0030097 The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates. GOC:dgh ISBN:0198506732 The process in which a relatively unspecialized precursor cell acquires specialized features of a lymphocyte. A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin. GO:0046650 lymphocyte cell differentiation lymphocytic blood cell differentiation biological_process lymphocyte development GO:0030098 Note that immunologists typically use the word 'development' to refer to cells of B or T cell lineages undergoing the process that GO describes as 'cell differentiation'. lymphocyte differentiation GO:0030098 The process in which a relatively unspecialized precursor cell acquires specialized features of a lymphocyte. A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin. CL:0000542 GOC:go_curators lymphocyte development GOC:add The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages. biological_process GO:0030099 myeloid cell differentiation GO:0030099 The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages. GOC:add ISBN:0781735149 Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, from the Golgi to the ER (retrograde transport) or to destinations within or outside the cell. NIF_Subcellular:sao885490876 constitutive secretory pathway transport vesicle Golgi to vacuole transport vesicle Golgi-vacuole transport vesicle cellular_component secretory vesicle GO:0030133 Note that the term 'secretory vesicle' is sometimes used in this sense, but can also mean 'secretory granule ; GO:0030141'. transport vesicle GO:0030133 Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, from the Golgi to the ER (retrograde transport) or to destinations within or outside the cell. GOC:mah PMID:22160157 A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules. secretory vesicle cellular_component GO:0030141 Note that the term 'secretory vesicle' is sometimes used in this sense, but can also mean 'transport vesicle ; GO:0030133'. secretory granule GO:0030141 A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules. GOC:mah ISBN:0198506732 The cellular developmental process in which a relatively unspecialized cell, e.g. embryonic or regenerative cell, acquires specialized structural and/or functional features that characterize a specific cell. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state. Wikipedia:Cellular_differentiation biological_process GO:0030154 cell differentiation GO:0030154 The cellular developmental process in which a relatively unspecialized cell, e.g. embryonic or regenerative cell, acquires specialized structural and/or functional features that characterize a specific cell. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state. ISBN:0198506732 The process in which a relatively unspecialized cell acquires specialized features of a neuron. biological_process GO:0030182 neuron differentiation GO:0030182 The process in which a relatively unspecialized cell acquires specialized features of a neuron. GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix. Reactome:R-HSA-1474244 extracellular matrix organisation biological_process extracellular matrix organization and biogenesis GO:0030198 extracellular matrix organization GO:0030198 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix. GOC:mah Reactome:R-HSA-1474244 Extracellular matrix organization extracellular matrix organization and biogenesis GOC:mah Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix. Reactome:R-HSA-1474290 Reactome:R-HSA-2214320 Reactome:R-HSA-2243919 collagen fibril organisation fibrillar collagen organization biological_process GO:0030199 collagen fibril organization GO:0030199 Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix. GOC:mah ISBN:0815316194 Reactome:R-HSA-1474290 Collagen formation Reactome:R-HSA-2214320 Anchoring fibril formation Reactome:R-HSA-2243919 Crosslinking of collagen fibrils fibrillar collagen organization GOC:mah The chemical reactions and pathways involving glycosaminoglycans, any of a group of linear polysaccharides composed of repeating disaccharide units. Reactome:R-HSA-1630316 glycosaminoglycan metabolism biological_process GO:0030203 glycosaminoglycan metabolic process GO:0030203 The chemical reactions and pathways involving glycosaminoglycans, any of a group of linear polysaccharides composed of repeating disaccharide units. PMID:38500384 Reactome:R-HSA-1630316 Glycosaminoglycan metabolism The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid. Hyaluronan is a type of non-sulfated glycosaminoglycan composed of the repeating disaccharide unit beta(1,4)-D-glucuronic acid-beta(1,3)-N-acetyl-D-glucosamine. Reactome:R-HSA-2142845 hyaluronan metabolism biological_process GO:0030212 hyaluronan metabolic process GO:0030212 The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid. Hyaluronan is a type of non-sulfated glycosaminoglycan composed of the repeating disaccharide unit beta(1,4)-D-glucuronic acid-beta(1,3)-N-acetyl-D-glucosamine. PMID:33171800 PMID:35536932 Reactome:R-HSA-2142845 Hyaluronan metabolism The chemical reactions and pathways resulting in the formation of hyaluronan, the naturally occurring anionic form of hyaluronic acid. Hyaluronan is a type of non-sulfated glycosaminoglycan composed of the repeating disaccharide unit beta(1,4)-D-glucuronic acid-beta(1,3)-N-acetyl-D-glucosamine. Reactome:R-HSA-2142850 hyaluronan anabolism hyaluronan biosynthesis hyaluronan formation hyaluronan synthesis biological_process GO:0030213 hyaluronan biosynthetic process GO:0030213 The chemical reactions and pathways resulting in the formation of hyaluronan, the naturally occurring anionic form of hyaluronic acid. Hyaluronan is a type of non-sulfated glycosaminoglycan composed of the repeating disaccharide unit beta(1,4)-D-glucuronic acid-beta(1,3)-N-acetyl-D-glucosamine. PMID:33171800 PMID:35536932 Reactome:R-HSA-2142850 Hyaluronan biosynthesis and export The process in which a myeloid precursor cell acquires specializes features of an erythrocyte. Wikipedia:Erythropoiesis RBC differentiation erythrocyte cell differentiation erythropoiesis red blood cell differentiation biological_process GO:0030218 erythrocyte differentiation GO:0030218 The process in which a myeloid precursor cell acquires specializes features of an erythrocyte. GOC:mah RBC differentiation CL:0000232 erythropoiesis GOC:add GOC:dph red blood cell differentiation CL:0000232 The process in which a myeloid precursor cell acquires specializes features of a megakaryocyte. megakaryocyte cell differentiation biological_process GO:0030219 megakaryocyte differentiation GO:0030219 The process in which a myeloid precursor cell acquires specializes features of a megakaryocyte. GOC:mah Formation of myofibrils, the repeating units of striated muscle. biological_process GO:0030239 myofibril assembly GO:0030239 Formation of myofibrils, the repeating units of striated muscle. GOC:mah The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells. GO:0000068 DNA condensation eukaryotic chromosome condensation nuclear chromosome condensation biological_process GO:0030261 chromosome condensation GO:0030261 The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells. GOC:mah ISBN:0815316194 DNA condensation Wikipedia:DNA_condensation eukaryotic chromosome condensation GOC:bf nuclear chromosome condensation GOC:bf Alterations undergone by nuclei at the molecular and morphological level as part of the execution phase of apoptosis. apoptotic nuclear change biological_process GO:0030262 apoptotic nuclear changes GO:0030262 Alterations undergone by nuclei at the molecular and morphological level as part of the execution phase of apoptosis. GOC:mah GOC:mtg_apoptosis The compaction of chromatin during apoptosis. Wikipedia:Pyknosis pyknosis biological_process GO:0030263 apoptotic chromosome condensation GO:0030263 The compaction of chromatin during apoptosis. GOC:mah The breakdown of the nucleus into small membrane-bounded compartments, or blebs, each of which contain compacted DNA. apoptotic nuclear fragmentation nucleus fragmentation biological_process nuclear fragmentation during apoptosis GO:0030264 nuclear fragmentation involved in apoptotic nuclear change GO:0030264 The breakdown of the nucleus into small membrane-bounded compartments, or blebs, each of which contain compacted DNA. GOC:dph GOC:mah GOC:mtg_apoptosis GOC:tb ISBN:0721639976 nuclear fragmentation during apoptosis GOC:dph GOC:tb Any process that modulates the frequency, rate or extent of ossification, the formation of bone or of a bony substance or the conversion of fibrous tissue or of cartilage into bone or a bony substance. regulation of bone biosynthesis regulation of bone formation biological_process GO:0030278 regulation of ossification GO:0030278 Any process that modulates the frequency, rate or extent of ossification, the formation of bone or of a bony substance or the conversion of fibrous tissue or of cartilage into bone or a bony substance. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of ossification, the formation of bone or of a bony substance or the conversion of fibrous tissue or of cartilage into bone or a bony substance. down regulation of ossification down-regulation of ossification downregulation of ossification negative regulation of bone biosynthesis negative regulation of bone formation inhibition of ossification biological_process GO:0030279 negative regulation of ossification GO:0030279 Any process that stops, prevents, or reduces the frequency, rate or extent of ossification, the formation of bone or of a bony substance or the conversion of fibrous tissue or of cartilage into bone or a bony substance. GOC:go_curators Any process that activates or increases the frequency, rate, extent or direction of cell growth. up regulation of cell growth up-regulation of cell growth upregulation of cell growth activation of cell growth stimulation of cell growth biological_process GO:0030307 positive regulation of cell growth GO:0030307 Any process that activates or increases the frequency, rate, extent or direction of cell growth. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate, extent or direction of cell growth. down regulation of cell growth down-regulation of cell growth downregulation of cell growth inhibition of cell growth biological_process GO:0030308 negative regulation of cell growth GO:0030308 Any process that stops, prevents, or reduces the frequency, rate, extent or direction of cell growth. GOC:go_curators A structure that lies outside the plasma membrane and surrounds the entire cell or cells. This does not include the periplasmic space. cellular_component GO:0030312 The outer membrane (of gram negative bacteria) or cell wall (of yeast or Gram positive bacteria) are defined as parts of this structure, see 'external encapsulating structure part'. external encapsulating structure GO:0030312 A structure that lies outside the plasma membrane and surrounds the entire cell or cells. This does not include the periplasmic space. GOC:go_curators The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract. biological_process GO:0030323 respiratory tube development GO:0030323 The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract. GOC:jid The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax. biological_process GO:0030324 lung development GO:0030324 The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax. GOC:jid UBERON:0002048 Any process that modulates the frequency, rate or extent of cell migration. biological_process GO:0030334 regulation of cell migration GO:0030334 Any process that modulates the frequency, rate or extent of cell migration. GOC:go_curators Any process that activates or increases the frequency, rate or extent of cell migration. up regulation of cell migration up-regulation of cell migration upregulation of cell migration activation of cell migration stimulation of cell migration biological_process GO:0030335 positive regulation of cell migration GO:0030335 Any process that activates or increases the frequency, rate or extent of cell migration. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of cell migration. down regulation of cell migration down-regulation of cell migration downregulation of cell migration inhibition of cell migration biological_process GO:0030336 negative regulation of cell migration GO:0030336 Any process that stops, prevents, or reduces the frequency, rate or extent of cell migration. GOC:go_curators The controlled breakdown of any cell membrane in the context of a normal process such as autophagy. membrane breakdown membrane catabolism membrane degradation biological_process GO:0030397 membrane disassembly GO:0030397 The controlled breakdown of any cell membrane in the context of a normal process such as autophagy. GOC:mah The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter. NIF_Subcellular:sao1770195789 Wikipedia:Axon cellular_component GO:0030424 axon GO:0030424 The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter. GOC:nln ISBN:0198506732 A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body. NIF_Subcellular:sao1211023249 Wikipedia:Dendrite cellular_component GO:0030425 dendrite GO:0030425 A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body. GOC:aruk GOC:bc GOC:dos GOC:mah GOC:nln ISBN:0198506732 The directed movement of the nucleus along microtubules within the cell, mediated by motor proteins. GO:0000065 nuclear movement, microtubule-mediated nucleus migration microtubule cytoskeleton-dependent nuclear positioning microtubule cytoskeleton-dependent nucleus positioning microtubule-dependent nuclear positioning microtubule-dependent nucleus positioning microtubule-mediated nuclear migration nuclear migration, microtubule-mediated transport of nucleus by microtubules transport of nucleus, microtubule-mediated biological_process GO:0030473 nuclear migration along microtubule GO:0030473 The directed movement of the nucleus along microtubules within the cell, mediated by motor proteins. GOC:mah GOC:sgd_curators The contractile fiber of smooth muscle cells. cellular_component GO:0030485 smooth muscle contractile fiber GO:0030485 The contractile fiber of smooth muscle cells. GOC:mah The lipid bilayer surrounding a transport vesicle. secretory vesicle membrane constitutive secretory pathway transport vesicle membrane cellular_component GO:0030658 transport vesicle membrane GO:0030658 The lipid bilayer surrounding a transport vesicle. GOC:mah The lipid bilayer surrounding a cytoplasmic vesicle. cellular_component GO:0030659 cytoplasmic vesicle membrane GO:0030659 The lipid bilayer surrounding a cytoplasmic vesicle. GOC:mah The lipid bilayer surrounding a vesicle associated with the Golgi apparatus. cellular_component Golgi vesicle membrane GO:0030660 Golgi-associated vesicle membrane GO:0030660 The lipid bilayer surrounding a vesicle associated with the Golgi apparatus. GOC:mah The lipid bilayer surrounding a secretory granule. secretory vesicle membrane cellular_component GO:0030667 secretory granule membrane GO:0030667 The lipid bilayer surrounding a secretory granule. GOC:mah The directed movement of substances along cytoskeletal fibers such as microfilaments or microtubules within a cell. biological_process GO:0030705 cytoskeleton-dependent intracellular transport GO:0030705 The directed movement of substances along cytoskeletal fibers such as microfilaments or microtubules within a cell. GOC:mah Directed movement of the oocyte, following its specification, from its original central position in the cyst to a posterior position relative to the nurse cells of the egg chamber, and its maintenance in this posterior location. This is the first sign of anterior-posterior asymmetry in the developing egg chamber. establishment and maintenance of oocyte localization in egg chamber establishment and maintenance of oocyte position during oogenesis oocyte localisation involved in germarium-derived egg chamber formation oogenesis, establishment and maintenance of oocyte localization oogenesis, oocyte localization oocyte positioning during oogenesis biological_process oocyte localization during germarium-derived egg chamber formation oocyte localization during oogenesis GO:0030720 oocyte localization involved in germarium-derived egg chamber formation GO:0030720 Directed movement of the oocyte, following its specification, from its original central position in the cyst to a posterior position relative to the nurse cells of the egg chamber, and its maintenance in this posterior location. This is the first sign of anterior-posterior asymmetry in the developing egg chamber. GOC:mtg_sensu PMID:10449356 oocyte localisation involved in germarium-derived egg chamber formation GOC:mah oocyte localization during germarium-derived egg chamber formation GOC:dph GOC:tb The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium. biological_process GO:0030855 epithelial cell differentiation GO:0030855 The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium. GOC:ecd PMID:11839751 Any process that modulates the frequency, rate or extent of epithelial cell differentiation. biological_process GO:0030856 regulation of epithelial cell differentiation GO:0030856 Any process that modulates the frequency, rate or extent of epithelial cell differentiation. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of epithelial cell differentiation. down regulation of epithelial cell differentiation down-regulation of epithelial cell differentiation downregulation of epithelial cell differentiation inhibition of epithelial cell differentiation biological_process GO:0030857 negative regulation of epithelial cell differentiation GO:0030857 Any process that stops, prevents, or reduces the frequency, rate or extent of epithelial cell differentiation. GOC:mah Any process that activates or increases the frequency, rate or extent of epithelial cell differentiation. up regulation of epithelial cell differentiation up-regulation of epithelial cell differentiation upregulation of epithelial cell differentiation activation of epithelial cell differentiation stimulation of epithelial cell differentiation biological_process GO:0030858 positive regulation of epithelial cell differentiation GO:0030858 Any process that activates or increases the frequency, rate or extent of epithelial cell differentiation. GOC:mah The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions). prosencephalon development biological_process GO:0030900 forebrain development GO:0030900 The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions). PMID:4975589 PMID:4992177 The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles). mesencephalon development biological_process GO:0030901 midbrain development GO:0030901 The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles). PMID:4975589 PMID:4992177 The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium). rhombencephalon development biological_process GO:0030902 hindbrain development GO:0030902 The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium). PMID:4975589 PMID:4992177 The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column. biological_process GO:0030903 notochord development GO:0030903 The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column. GOC:dgh The process whose specific outcome is the progression of the midbrain-hindbrain boundary over time, from its formation to the mature structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. MHB development isthmic organizer development isthmomesencephalic boundary development isthmus development midbrain-hindbrain orgainizer development biological_process GO:0030917 midbrain-hindbrain boundary development GO:0030917 The process whose specific outcome is the progression of the midbrain-hindbrain boundary over time, from its formation to the mature structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. GOC:dgh Any collagen trimer that passes through a lipid bilayer membrane. MACIT cellular_component GO:0030936 transmembrane collagen trimer GO:0030936 Any collagen trimer that passes through a lipid bilayer membrane. ISBN:0721639976 MACIT ISBN:0198599587 Any cellular process that results in the specification, formation or maintenance of polarized microtubule-based cytoskeletal structures. biological_process GO:0030951 establishment or maintenance of microtubule cytoskeleton polarity GO:0030951 Any cellular process that results in the specification, formation or maintenance of polarized microtubule-based cytoskeletal structures. GOC:mah Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures. biological_process cytoskeleton polarization GO:0030952 establishment or maintenance of cytoskeleton polarity GO:0030952 Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures. GOC:mah A nonmembrane-bound oligomeric protein complex that participates in bidirectional transport of molecules (cargo) along axonemal microtubules. intraflagellar transport complex intraflagellar transport particle cellular_component IFT complex GO:0030990 Note that we deem cilia and microtubule-based flagella to be equivalent. intraciliary transport particle GO:0030990 A nonmembrane-bound oligomeric protein complex that participates in bidirectional transport of molecules (cargo) along axonemal microtubules. GOC:cilia GOC:kmv PMID:14570576 PMID:22118932 PMID:23945166 A structure lying external to one or more cells, which provides structural support, biochemical or biomechanical cues for cells or tissues. GO:0005578 NIF_Subcellular:nlx_subcell_20090513 Wikipedia:Extracellular_matrix proteinaceous extracellular matrix matrisome cellular_component GO:0031012 extracellular matrix GO:0031012 A structure lying external to one or more cells, which provides structural support, biochemical or biomechanical cues for cells or tissues. GOC:BHF GOC:mah GOC:rph PMID:21123617 PMID:28089324 PMID:33605520 The directed movement of the nucleus along microfilaments within the cell, mediated by motor proteins. nuclear migration, microfilament-mediated biological_process GO:0031022 nuclear migration along microfilament GO:0031022 The directed movement of the nucleus along microfilaments within the cell, mediated by motor proteins. GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microtubule organizing center, a structure from which microtubules grow. microtubule organising center organisation biological_process microtubule organizing center organization and biogenesis GO:0031023 microtubule organizing center organization GO:0031023 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microtubule organizing center, a structure from which microtubules grow. GOC:dph GOC:jl GOC:mah microtubule organizing center organization and biogenesis GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin or paramyosin. The myosin may be organized into filaments. actomyosin organization actomyosin structure organisation biological_process actomyosin structure organization and biogenesis GO:0031032 Note that this term is a child of 'actin cytoskeleton organization and biogenesis ; GO:0030036' because the actin cytoskeleton is defined as actin filaments and associated proteins. actomyosin structure organization GO:0031032 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin or paramyosin. The myosin may be organized into filaments. GOC:dph GOC:jl GOC:mah actomyosin structure organization and biogenesis GOC:mah Electron-dense organelle with a granular internal matrix; contains proteins destined to be secreted. NIF_Subcellular:sao772007592 cellular_component GO:0031045 dense core granule GO:0031045 Electron-dense organelle with a granular internal matrix; contains proteins destined to be secreted. NIF_Subcellular:sao772007592 PMID:14690495 The process occurring during the embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure. embryonic eye development biological_process GO:0031076 embryonic camera-type eye development GO:0031076 The process occurring during the embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure. GOC:mah GOC:mtg_sensu A membrane that is one of the two lipid bilayers of an organelle envelope or the outermost membrane of single membrane bound organelle. NIF_Subcellular:sao830981606 cellular_component intracellular membrane GO:0031090 organelle membrane GO:0031090 A membrane that is one of the two lipid bilayers of an organelle envelope or the outermost membrane of single membrane bound organelle. GOC:dos GOC:mah intracellular membrane NIF_Subcellular:sao830981606 Assembly or disassembly of microtubules by the addition or removal of tubulin heterodimers from a microtubule. microtubule dynamics biological_process GO:0031109 microtubule polymerization or depolymerization GO:0031109 Assembly or disassembly of microtubules by the addition or removal of tubulin heterodimers from a microtubule. GOC:mah Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule. biological_process GO:0031110 regulation of microtubule polymerization or depolymerization GO:0031110 Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization or depolymerization. down regulation of microtubule polymerization or depolymerization down-regulation of microtubule polymerization or depolymerization downregulation of microtubule polymerization or depolymerization inhibition of microtubule polymerization or depolymerization biological_process GO:0031111 negative regulation of microtubule polymerization or depolymerization GO:0031111 Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization or depolymerization. GOC:mah Any process that activates or increases the frequency, rate or extent of microtubule polymerization or depolymerization. up regulation of microtubule polymerization or depolymerization up-regulation of microtubule polymerization or depolymerization upregulation of microtubule polymerization or depolymerization activation of microtubule polymerization or depolymerization stimulation of microtubule polymerization or depolymerization biological_process GO:0031112 positive regulation of microtubule polymerization or depolymerization GO:0031112 Any process that activates or increases the frequency, rate or extent of microtubule polymerization or depolymerization. GOC:mah Any process that modulates the frequency, rate or extent of microtubule polymerization. biological_process GO:0031113 regulation of microtubule polymerization GO:0031113 Any process that modulates the frequency, rate or extent of microtubule polymerization. GOC:mah Any process that modulates the frequency, rate or extent of microtubule depolymerization. regulation of microtubule disassembly biological_process GO:0031114 regulation of microtubule depolymerization GO:0031114 Any process that modulates the frequency, rate or extent of microtubule depolymerization. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization. down regulation of microtubule polymerization down-regulation of microtubule polymerization downregulation of microtubule polymerization inhibition of microtubule polymerization biological_process GO:0031115 negative regulation of microtubule polymerization GO:0031115 Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization. GOC:mah Any process that activates or increases the frequency, rate or extent of microtubule polymerization. up regulation of microtubule polymerization up-regulation of microtubule polymerization upregulation of microtubule polymerization activation of microtubule polymerization stimulation of microtubule polymerization biological_process GO:0031116 positive regulation of microtubule polymerization GO:0031116 Any process that activates or increases the frequency, rate or extent of microtubule polymerization. GOC:mah Any process that activates or increases the frequency, rate or extent of microtubule depolymerization. microtubule destabilization positive regulation of microtubule disassembly up regulation of microtubule depolymerization up-regulation of microtubule depolymerization upregulation of microtubule depolymerization activation of microtubule depolymerization positive regulation of microtubule catastrophe stimulation of microtubule depolymerization biological_process GO:0031117 positive regulation of microtubule depolymerization GO:0031117 Any process that activates or increases the frequency, rate or extent of microtubule depolymerization. GOC:mah positive regulation of microtubule catastrophe GOC:dph GOC:tb A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell. cytoplasmic microtubule organisation biological_process cytoplasmic microtubule organization and biogenesis GO:0031122 cytoplasmic microtubule organization GO:0031122 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell. GOC:mah cytoplasmic microtubule organization and biogenesis GOC:mah A developmental process involving two tissues in which one tissue (the inducer) produces a signal that directs cell fate commitment of cells in the second tissue (the responder). biological_process GO:0031128 developmental induction GO:0031128 A developmental process involving two tissues in which one tissue (the inducer) produces a signal that directs cell fate commitment of cells in the second tissue (the responder). GOC:cjm GOC:dph GOC:mah PMID:24503535 The process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites). neurite biosynthesis neurite development neurite formation neurite growth neurite outgrowth biological_process GO:0031175 neuron projection development GO:0031175 The process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites). GOC:mah neurite development GOC:dph The area of a motile cell closest to the direction of movement. front of cell leading edge of cell cellular_component GO:0031252 cell leading edge GO:0031252 The area of a motile cell closest to the direction of movement. GOC:pg The portion of the plasma membrane surrounding a plasma membrane bounded cell surface projection. cellular_component membrane extension membrane projection GO:0031253 cell projection membrane GO:0031253 The portion of the plasma membrane surrounding a plasma membrane bounded cell surface projection. GOC:krc GOC:mah The portion of the plasma membrane surrounding the leading edge of a motile cell. cellular_component GO:0031256 leading edge membrane GO:0031256 The portion of the plasma membrane surrounding the leading edge of a motile cell. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of protein complex assembly. down regulation of protein complex assembly down-regulation of protein complex assembly downregulation of protein complex assembly inhibition of protein complex assembly biological_process negative regulation of protein complex assembly GO:0031333 negative regulation of protein-containing complex assembly GO:0031333 Any process that stops, prevents, or reduces the frequency, rate or extent of protein complex assembly. GOC:mah Any process that activates or increases the frequency, rate or extent of protein complex assembly. up regulation of protein complex assembly up-regulation of protein complex assembly upregulation of protein complex assembly activation of protein complex assembly stimulation of protein complex assembly biological_process positive regulation of protein complex assembly GO:0031334 positive regulation of protein-containing complex assembly GO:0031334 Any process that activates or increases the frequency, rate or extent of protein complex assembly. GOC:mah Any process that modulates the frequency, rate or extent of vesicle fusion. biological_process GO:0031338 regulation of vesicle fusion GO:0031338 Any process that modulates the frequency, rate or extent of vesicle fusion. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of vesicle fusion. down regulation of vesicle fusion down-regulation of vesicle fusion downregulation of vesicle fusion inhibition of vesicle fusion biological_process GO:0031339 negative regulation of vesicle fusion GO:0031339 Any process that stops, prevents, or reduces the frequency, rate or extent of vesicle fusion. GOC:mah Any process that activates or increases the frequency, rate or extent of vesicle fusion. up regulation of vesicle fusion up-regulation of vesicle fusion upregulation of vesicle fusion activation of vesicle fusion stimulation of vesicle fusion biological_process GO:0031340 positive regulation of vesicle fusion GO:0031340 Any process that activates or increases the frequency, rate or extent of vesicle fusion. GOC:mah Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell projections. regulation of cell projection organisation biological_process regulation of cell projection organization and biogenesis GO:0031344 regulation of cell projection organization GO:0031344 Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell projections. GOC:mah regulation of cell projection organization and biogenesis GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell projections. down regulation of cell projection organization down-regulation of cell projection organization downregulation of cell projection organization negative regulation of cell projection organisation inhibition of cell projection organization biological_process negative regulation of cell projection organization and biogenesis GO:0031345 negative regulation of cell projection organization GO:0031345 Any process that stops, prevents, or reduces the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell projections. GOC:mah down regulation of cell projection organization GOC:mah negative regulation of cell projection organization and biogenesis GOC:mah Any process that activates or increases the frequency, rate or extent of the process involved in the formation, arrangement of constituent parts, or disassembly of cell projections. positive regulation of cell projection organisation up regulation of cell projection organization up-regulation of cell projection organization upregulation of cell projection organization activation of cell projection organization stimulation of cell projection organization biological_process positive regulation of cell projection organization and biogenesis GO:0031346 positive regulation of cell projection organization GO:0031346 Any process that activates or increases the frequency, rate or extent of the process involved in the formation, arrangement of constituent parts, or disassembly of cell projections. GOC:mah positive regulation of cell projection organization and biogenesis GOC:mah Any process that modulates the frequency, rate or extent of a defense response. biological_process GO:0031347 regulation of defense response GO:0031347 Any process that modulates the frequency, rate or extent of a defense response. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of a defense response. down regulation of defense response down-regulation of defense response downregulation of defense response inhibition of defense response biological_process GO:0031348 negative regulation of defense response GO:0031348 Any process that stops, prevents, or reduces the frequency, rate or extent of a defense response. GOC:mah Any process that activates or increases the frequency, rate or extent of a defense response. up regulation of defense response up-regulation of defense response upregulation of defense response activation of defense response stimulation of defense response biological_process GO:0031349 positive regulation of defense response GO:0031349 Any process that activates or increases the frequency, rate or extent of a defense response. GOC:mah A vesicle found in the cytoplasm of a cell. GO:0016023 NIF_Subcellular:sao180601769 cellular_component cytoplasmic membrane bounded vesicle cytoplasmic membrane-enclosed vesicle cytoplasmic, membrane-bounded vesicle GO:0031410 cytoplasmic vesicle GO:0031410 A vesicle found in the cytoplasm of a cell. GOC:ai GOC:mah GOC:vesicles A localization process that acts on a protein complex; the complex is transported to, or maintained in, a specific location. GO:0034629 establishment and maintenance of protein complex localization protein complex localisation biological_process cellular protein complex localisation cellular protein complex localization cellular protein-containing complex localization establishment and maintenance of cellular protein complex localization protein complex localization GO:0031503 protein-containing complex localization GO:0031503 A localization process that acts on a protein complex; the complex is transported to, or maintained in, a specific location. GOC:mah protein complex localisation GOC:mah cellular protein complex localisation GOC:mah A cilium which may have a variable arrangement of axonemal microtubules and also contains molecular motors. It may beat with a whip-like pattern that promotes cell motility or transport of fluids and other cells across a cell surface, such as on epithelial cells that line the lumenal ducts of various tissues; or they may display a distinct twirling motion that directs fluid flow asymmetrically across the cellular surface to affect asymmetric body plan organization. Motile cilia can be found in single as well as multiple copies per cell. GO:0009434 GO:0031512 motile cilia cellular_component microtubule-based flagellum motile primary cilia motile primary cilium motile secondary cilium nodal cilium GO:0031514 motile cilium GO:0031514 A cilium which may have a variable arrangement of axonemal microtubules and also contains molecular motors. It may beat with a whip-like pattern that promotes cell motility or transport of fluids and other cells across a cell surface, such as on epithelial cells that line the lumenal ducts of various tissues; or they may display a distinct twirling motion that directs fluid flow asymmetrically across the cellular surface to affect asymmetric body plan organization. Motile cilia can be found in single as well as multiple copies per cell. GOC:cilia GOC:dgh GOC:kmv PMID:17009929 PMID:20144998 PMID:22118931 The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential. NIF_Subcellular:sao1124888485 Wikipedia:Neuromuscular_junction cellular_component NMJ motor endplate GO:0031594 In vertebrates, the term 'neuromuscular junction' is limited to synapses targeting skeletal muscle fibers - all of which are cholinergic and excitatory. Both inhibitory and excitatory neuromuscular junctions exist in invertebrates, utilizing a range of neurotransmitters including glutamate, GABA and 5-HT. neuromuscular junction GO:0031594 The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential. GOC:nln NMJ GOC:ha motor endplate NIF_Subcellular:nlx_subcell_20090512 Any process that modulates the frequency, rate or extent of the formation of a myelin sheath around nerve axons. biological_process GO:0031641 regulation of myelination GO:0031641 Any process that modulates the frequency, rate or extent of the formation of a myelin sheath around nerve axons. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of the formation of a myelin sheath around nerve axons. down regulation of myelination down-regulation of myelination downregulation of myelination inhibition of myelination biological_process GO:0031642 negative regulation of myelination GO:0031642 Any process that stops, prevents, or reduces the frequency, rate or extent of the formation of a myelin sheath around nerve axons. GOC:mah Any process that activates or increases the frequency, rate or extent of the formation of a myelin sheath around nerve axons. up regulation of myelination up-regulation of myelination upregulation of myelination activation of myelination stimulation of myelination biological_process GO:0031643 positive regulation of myelination GO:0031643 Any process that activates or increases the frequency, rate or extent of the formation of a myelin sheath around nerve axons. GOC:mah Any process that modulates the frequency, rate or extent of a neurophysiological process, an organ system process carried out by any of the organs or tissues of the nervous system. regulation of neurological process regulation of neurological system process regulation of neurophysiological process biological_process GO:0031644 regulation of nervous system process GO:0031644 Any process that modulates the frequency, rate or extent of a neurophysiological process, an organ system process carried out by any of the organs or tissues of the nervous system. GOC:dph GOC:mah GOC:tb regulation of neurological process GOC:dph GOC:tb Any process that stops, prevents, or reduces the frequency, rate or extent of a neurophysiological process. down regulation of neurological process down-regulation of neurological process downregulation of neurological process negative regulation of neurological process negative regulation of neurological system process negative regulation of neurophysiological process inhibition of neurological process biological_process GO:0031645 negative regulation of nervous system process GO:0031645 Any process that stops, prevents, or reduces the frequency, rate or extent of a neurophysiological process. GOC:dph GOC:mah GOC:tb negative regulation of neurological process GOC:dph GOC:tb Any process that activates or increases the frequency, rate or extent of a neurophysiological process. positive regulation of neurological process positive regulation of neurological system process positive regulation of neurophysiological process up regulation of neurological process up-regulation of neurological process upregulation of neurological process activation of neurological process stimulation of neurological process biological_process GO:0031646 positive regulation of nervous system process GO:0031646 Any process that activates or increases the frequency, rate or extent of a neurophysiological process. GOC:dph GOC:mah GOC:tb positive regulation of neurological process GOC:dph GOC:tb Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space. NIF_Subcellular:sao1687101204 cellular_component GO:0031965 nuclear membrane GO:0031965 Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space. GOC:mah GOC:pz A double membrane structure enclosing an organelle, including two lipid bilayers and the region between them. In some cases, an organelle envelope may have more than two membranes. cellular_component GO:0031967 organelle envelope GO:0031967 A double membrane structure enclosing an organelle, including two lipid bilayers and the region between them. In some cases, an organelle envelope may have more than two membranes. GOC:mah GOC:pz The outer, i.e. cytoplasm-facing in a cellular organelle, lipid bilayer of an organelle envelope. cellular_component GO:0031968 organelle outer membrane GO:0031968 The outer, i.e. cytoplasm-facing in a cellular organelle, lipid bilayer of an organelle envelope. GOC:mah The enclosed volume within a sealed membrane or between two sealed membranes. Encompasses the volume enclosed by the membranes of a particular organelle, e.g. endoplasmic reticulum lumen, or the space between the two lipid bilayers of a double membrane surrounding an organelle, e.g. nuclear envelope lumen. cellular_component GO:0031974 membrane-enclosed lumen GO:0031974 The enclosed volume within a sealed membrane or between two sealed membranes. Encompasses the volume enclosed by the membranes of a particular organelle, e.g. endoplasmic reticulum lumen, or the space between the two lipid bilayers of a double membrane surrounding an organelle, e.g. nuclear envelope lumen. GOC:add GOC:mah The volume enclosed by the nuclear inner membrane. cellular_component GO:0031981 nuclear lumen GO:0031981 The volume enclosed by the nuclear inner membrane. GOC:mah GOC:pz Any small, fluid-filled, spherical organelle enclosed by membrane. GO:0031988 NIF_Subcellular:sao221389602 Wikipedia:Vesicle_(biology) cellular_component membrane-bounded vesicle membrane-enclosed vesicle GO:0031982 vesicle GO:0031982 Any small, fluid-filled, spherical organelle enclosed by membrane. GOC:mah GOC:pz GOC:vesicles A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a ciliary basal body, a short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum). microtubule basal body organisation microtubule basal body organization biological_process microtubule basal body organization and biogenesis GO:0032053 ciliary basal body organization GO:0032053 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a ciliary basal body, a short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum). GOC:cilia GOC:dph GOC:jl GOC:krc GOC:mah PMID:9889124 microtubule basal body organisation GOC:mah microtubule basal body organization and biogenesis GOC:mah Any process that stops, prevents or reduces the rate of translation initiation as a result of a stimulus indicating the organism is under stress. down regulation of translation initiation in response to stress down-regulation of translation initiation in response to stress downregulation of translation initiation in response to stress inhibition of translation initiation in response to stress biological_process GO:0032057 negative regulation of translational initiation in response to stress GO:0032057 Any process that stops, prevents or reduces the rate of translation initiation as a result of a stimulus indicating the organism is under stress. GOC:mah Any process that activates or increases the frequency, rate or extent of translation initiation as a result of a stimulus indicating the organism is under stress. up regulation of translation initiation in response to stress up-regulation of translation initiation in response to stress upregulation of translation initiation in response to stress activation of translation initiation in response to stress stimulation of translation initiation in response to stress biological_process GO:0032058 positive regulation of translational initiation in response to stress GO:0032058 Any process that activates or increases the frequency, rate or extent of translation initiation as a result of a stimulus indicating the organism is under stress. GOC:mah A cell extension caused by localized decoupling of the cytoskeleton from the plasma membrane and characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusion. Blebs are formed during apoptosis and other cellular processes, including cell locomotion, cell division, and as a result of physical or chemical stresses. Wikipedia:Bleb_(cell_biology) plasma membrane bleb cellular_component GO:0032059 bleb GO:0032059 A cell extension caused by localized decoupling of the cytoskeleton from the plasma membrane and characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusion. Blebs are formed during apoptosis and other cellular processes, including cell locomotion, cell division, and as a result of physical or chemical stresses. GOC:mtg_apoptosis PMID:12083798 PMID:16624291 Wikipedia:Bleb_(cell_biology) plasma membrane bleb GOC:pr The assembly of a bleb, a cell extension caused by localized decoupling of the cytoskeleton from the plasma membrane and characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusion. Plasma membrane blebbing occurs during apoptosis and other cellular processes, including cell locomotion, cell division, and as a result of physical or chemical stresses. blebbing membrane blebbing cell blebbing plasma membrane bleb assembly plasma membrane blebbing biological_process GO:0032060 bleb assembly GO:0032060 The assembly of a bleb, a cell extension caused by localized decoupling of the cytoskeleton from the plasma membrane and characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusion. Plasma membrane blebbing occurs during apoptosis and other cellular processes, including cell locomotion, cell division, and as a result of physical or chemical stresses. GOC:mah GOC:mtg_apoptosis PMID:12083798 PMID:16624291 Wikipedia:Bleb_(cell_biology) blebbing GOC:pr membrane blebbing GOC:pr plasma membrane bleb assembly GOC:pr plasma membrane blebbing GOC:pr A process in which a protein or protein complex is maintained in a specific location in the cell cortex. biological_process cortical protein anchoring GO:0032065 maintenance of protein location in cell cortex GO:0032065 A process in which a protein or protein complex is maintained in a specific location in the cell cortex. GOC:vw Any process that modulates the frequency, rate or extent of a response to an external stimulus. biological_process GO:0032101 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. regulation of response to external stimulus GO:0032101 Any process that modulates the frequency, rate or extent of a response to an external stimulus. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of a response to an external stimulus. down regulation of response to external stimulus down-regulation of response to external stimulus downregulation of response to external stimulus inhibition of response to external stimulus biological_process GO:0032102 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. negative regulation of response to external stimulus GO:0032102 Any process that stops, prevents, or reduces the frequency, rate or extent of a response to an external stimulus. GOC:mah Any process that activates, maintains or increases the rate of a response to an external stimulus. up regulation of response to external stimulus up-regulation of response to external stimulus upregulation of response to external stimulus activation of response to external stimulus stimulation of response to external stimulus biological_process GO:0032103 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. positive regulation of response to external stimulus GO:0032103 Any process that activates, maintains or increases the rate of a response to an external stimulus. GOC:mah The lipid bilayer surrounding a dense core granule. dense core vesicle membrane cellular_component GO:0032127 dense core granule membrane GO:0032127 The lipid bilayer surrounding a dense core granule. GOC:mah dense core vesicle membrane GOC:kmv Any process that modulates the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine. biological_process GO:0032222 regulation of synaptic transmission, cholinergic GO:0032222 Any process that modulates the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine. down regulation of synaptic transmission, cholinergic down-regulation of synaptic transmission, cholinergic downregulation of synaptic transmission, cholinergic inhibition of synaptic transmission, cholinergic biological_process GO:0032223 negative regulation of synaptic transmission, cholinergic GO:0032223 Any process that stops, prevents, or reduces the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine. GOC:mah Any process that activates, maintains or increases the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine. up regulation of synaptic transmission, cholinergic up-regulation of synaptic transmission, cholinergic upregulation of synaptic transmission, cholinergic activation of synaptic transmission, cholinergic stimulation of synaptic transmission, cholinergic biological_process GO:0032224 positive regulation of synaptic transmission, cholinergic GO:0032224 Any process that activates, maintains or increases the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine. GOC:mah Any process that modulates the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport GO:0032239 regulation of nucleobase-containing compound transport GO:0032239 Any process that modulates the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:mah regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport GOC:dph GOC:tb Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. down regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport down-regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport downregulation of nucleobase, nucleoside, nucleotide and nucleic acid transport inhibition of nucleobase, nucleoside, nucleotide and nucleic acid transport biological_process negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport GO:0032240 negative regulation of nucleobase-containing compound transport GO:0032240 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:mah negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport GOC:dph GOC:tb Any process that activates or increases the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. up regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport up-regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport upregulation of nucleobase, nucleoside, nucleotide and nucleic acid transport activation of nucleobase, nucleoside, nucleotide and nucleic acid transport stimulation of nucleobase, nucleoside, nucleotide and nucleic acid transport biological_process positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport GO:0032241 positive regulation of nucleobase-containing compound transport GO:0032241 Any process that activates or increases the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:mah positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport GOC:dph GOC:tb Any process in which a secretory granule is transported to, and/or maintained in, a specific location within the cell. secretory granule localisation biological_process secretory granule clustering GO:0032252 secretory granule localization GO:0032252 Any process in which a secretory granule is transported to, and/or maintained in, a specific location within the cell. GOC:mah secretory granule localisation GOC:mah Any process in which a dense core granule is transported to, and/or maintained in, a specific location within the cell. dense core granule localisation dense core vesicle localization biological_process dense core granule clustering GO:0032253 dense core granule localization GO:0032253 Any process in which a dense core granule is transported to, and/or maintained in, a specific location within the cell. GOC:mah dense core granule localisation GOC:mah dense core vesicle localization GOC:kmv Any process that modulates the frequency, rate or extent of the process of creating protein polymers. regulation of protein polymerisation biological_process GO:0032271 regulation of protein polymerization GO:0032271 Any process that modulates the frequency, rate or extent of the process of creating protein polymers. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of the process of creating protein polymers. down regulation of protein polymerization down-regulation of protein polymerization downregulation of protein polymerization inhibition of protein polymerization biological_process GO:0032272 negative regulation of protein polymerization GO:0032272 Any process that stops, prevents, or reduces the frequency, rate or extent of the process of creating protein polymers. GOC:mah Any process that activates or increases the frequency, rate or extent of the process of creating protein polymers. up regulation of protein polymerization up-regulation of protein polymerization upregulation of protein polymerization activation of protein polymerization stimulation of protein polymerization biological_process GO:0032273 positive regulation of protein polymerization GO:0032273 Any process that activates or increases the frequency, rate or extent of the process of creating protein polymers. GOC:mah The process in which the wraps of cell membrane that constitute myelin are laid down around an axon in the central or peripheral nervous system. myelin sheath assembly biological_process myelin formation GO:0032288 myelin assembly GO:0032288 The process in which the wraps of cell membrane that constitute myelin are laid down around an axon in the central or peripheral nervous system. GOC:dgh GOC:dph GOC:tb myelin formation GOC:dph GOC:tb The process in which the wraps of cell membrane that constitute myelin are laid down around an axon by an oligodendrocyte in the central nervous system. central nervous system myelin sheath formation myelin formation in central nervous system biological_process GO:0032289 central nervous system myelin formation GO:0032289 The process in which the wraps of cell membrane that constitute myelin are laid down around an axon by an oligodendrocyte in the central nervous system. GOC:dgh The process in which the wraps of cell membrane that constitute myelin are laid down around an axon by Schwann cells in the peripheral nervous system. myelin formation in peripheral nervous system peripheral nervous system myelin sheath formation biological_process GO:0032290 peripheral nervous system myelin formation GO:0032290 The process in which the wraps of cell membrane that constitute myelin are laid down around an axon by Schwann cells in the peripheral nervous system. GOC:dgh The process in which a glial cell membrane closes around an axon in the central nervous system. This can be a myelinating or a non-myelinating neuron-glial interaction. ensheathment of axons in central nervous system biological_process GO:0032291 axon ensheathment in central nervous system GO:0032291 The process in which a glial cell membrane closes around an axon in the central nervous system. This can be a myelinating or a non-myelinating neuron-glial interaction. GOC:dgh The process in which a Schwann cell membrane closes around an axon in the peripheral nervous system. This can be a myelinating or a non-myelinating neuron-glial interaction. ensheathment of axons in peripheral nervous system biological_process GO:0032292 peripheral nervous system axon ensheathment GO:0032292 The process in which a Schwann cell membrane closes around an axon in the peripheral nervous system. This can be a myelinating or a non-myelinating neuron-glial interaction. GOC:dgh Any process that modulates the frequency, rate or extent of chondrocyte differentiation. biological_process GO:0032330 regulation of chondrocyte differentiation GO:0032330 Any process that modulates the frequency, rate or extent of chondrocyte differentiation. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of chondrocyte differentiation. down regulation of chondrocyte differentiation down-regulation of chondrocyte differentiation downregulation of chondrocyte differentiation inhibition of chondrocyte differentiation biological_process GO:0032331 negative regulation of chondrocyte differentiation GO:0032331 Any process that stops, prevents, or reduces the frequency, rate or extent of chondrocyte differentiation. GOC:mah Any process that activates or increases the frequency, rate or extent of chondrocyte differentiation. up regulation of chondrocyte differentiation up-regulation of chondrocyte differentiation upregulation of chondrocyte differentiation activation of chondrocyte differentiation stimulation of chondrocyte differentiation biological_process GO:0032332 positive regulation of chondrocyte differentiation GO:0032332 Any process that activates or increases the frequency, rate or extent of chondrocyte differentiation. GOC:mah The directed movement of lipids within cells. biological_process GO:0032365 intracellular lipid transport GO:0032365 The directed movement of lipids within cells. GOC:mah Any process that modulates the frequency, rate or extent of the directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process GO:0032368 regulation of lipid transport GO:0032368 Any process that modulates the frequency, rate or extent of the directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. down regulation of lipid transport down-regulation of lipid transport downregulation of lipid transport inhibition of lipid transport biological_process GO:0032369 negative regulation of lipid transport GO:0032369 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:mah Any process that activates or increases the frequency, rate or extent of the directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. up regulation of lipid transport up-regulation of lipid transport upregulation of lipid transport activation of lipid transport stimulation of lipid transport biological_process GO:0032370 positive regulation of lipid transport GO:0032370 Any process that activates or increases the frequency, rate or extent of the directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:mah Any process that modulates the frequency, rate or extent of the directed movement of lipids within cells. biological_process GO:0032377 regulation of intracellular lipid transport GO:0032377 Any process that modulates the frequency, rate or extent of the directed movement of lipids within cells. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of lipids within cells. down regulation of intracellular lipid transport down-regulation of intracellular lipid transport downregulation of intracellular lipid transport inhibition of intracellular lipid transport biological_process GO:0032378 negative regulation of intracellular lipid transport GO:0032378 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of lipids within cells. GOC:mah Any process that activates or increases the frequency, rate or extent of the directed movement of lipids within cells. up regulation of intracellular lipid transport up-regulation of intracellular lipid transport upregulation of intracellular lipid transport activation of intracellular lipid transport stimulation of intracellular lipid transport biological_process GO:0032379 positive regulation of intracellular lipid transport GO:0032379 Any process that activates or increases the frequency, rate or extent of the directed movement of lipids within cells. GOC:mah Any process that modulates the frequency, rate or extent of the directed movement of substances within cells. biological_process GO:0032386 regulation of intracellular transport GO:0032386 Any process that modulates the frequency, rate or extent of the directed movement of substances within cells. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of substances within cells. down regulation of intracellular transport down-regulation of intracellular transport downregulation of intracellular transport inhibition of intracellular transport biological_process GO:0032387 negative regulation of intracellular transport GO:0032387 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of substances within cells. GOC:mah Any process that activates or increases the frequency, rate or extent of the directed movement of substances within cells. up regulation of intracellular transport up-regulation of intracellular transport upregulation of intracellular transport activation of intracellular transport stimulation of intracellular transport biological_process GO:0032388 positive regulation of intracellular transport GO:0032388 Any process that activates or increases the frequency, rate or extent of the directed movement of substances within cells. GOC:mah Any biological process, occurring at the level of a multicellular organism, pertinent to its function. jl 2012-09-19T16:07:47Z GO:0044707 GO:0050874 organismal physiological process biological_process single-multicellular organism process GO:0032501 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. multicellular organismal process GO:0032501 Any biological process, occurring at the level of a multicellular organism, pertinent to its function. GOC:curators GOC:dph GOC:isa_complete GOC:tb A biological process whose specific outcome is the progression of an integrated living unit: an anatomical structure (which may be a subcellular structure, cell, tissue, or organ), or organism over time from an initial condition to a later condition. jl 2012-12-19T12:21:31Z GO:0044767 development biological_process single-organism developmental process GO:0032502 developmental process GO:0032502 A biological process whose specific outcome is the progression of an integrated living unit: an anatomical structure (which may be a subcellular structure, cell, tissue, or organ), or organism over time from an initial condition to a later condition. GOC:isa_complete Any process in which a protein is maintained in a specific location within, or in the membrane of, a cell, and is prevented from moving elsewhere. biological_process maintenance of protein localization in cell GO:0032507 maintenance of protein location in cell GO:0032507 Any process in which a protein is maintained in a specific location within, or in the membrane of, a cell, and is prevented from moving elsewhere. GOC:isa_complete GOC:mah maintenance of protein localization in cell GOC:dph GOC:tb The portion of the plasma membrane surrounding a neuron projection. cellular_component GO:0032589 neuron projection membrane GO:0032589 The portion of the plasma membrane surrounding a neuron projection. GOC:mah The portion of the plasma membrane surrounding a dendrite. cellular_component GO:0032590 dendrite membrane GO:0032590 The portion of the plasma membrane surrounding a dendrite. GOC:mah The portion of the plasma membrane surrounding a dendritic spine. cellular_component GO:0032591 dendritic spine membrane GO:0032591 The portion of the plasma membrane surrounding a dendritic spine. GOC:mah The directed movement of a protein from one location to another within a lipid bilayer. protein translocation within membrane receptor translocation within membrane receptor transport within lipid bilayer biological_process GO:0032594 protein transport within lipid bilayer GO:0032594 The directed movement of a protein from one location to another within a lipid bilayer. GOC:mah The chemical reactions and pathways resulting in the formation of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. Includes polymerization of ribonucleotide monomers. Refers not only to transcription but also to e.g. viral RNA replication. GO:0062103 RNA anabolism RNA biosynthesis RNA formation RNA synthesis double-stranded RNA biosynthesis double-stranded RNA biosynthetic process dsRNA biosynthesis dsRNA biosynthetic process biological_process GO:0032774 Note that, in some cases, viral RNA replication and viral transcription from RNA actually refer to the same process, but may be called differently depending on the focus of a specific research study. RNA biosynthetic process GO:0032774 The chemical reactions and pathways resulting in the formation of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. Includes polymerization of ribonucleotide monomers. Refers not only to transcription but also to e.g. viral RNA replication. GOC:mah GOC:txnOH dsRNA biosynthetic process GOC:BHF GOC:BHF_telomere GOC:nc GOC:rl The chemical reactions and pathways involving monocarboxylic acids, any organic acid containing one carboxyl (COOH) group or anion (COO-). monocarboxylate metabolic process monocarboxylic acid metabolism biological_process GO:0032787 monocarboxylic acid metabolic process GO:0032787 The chemical reactions and pathways involving monocarboxylic acids, any organic acid containing one carboxyl (COOH) group or anion (COO-). GOC:vk The disaggregation of a ribosome into its constituent components; includes the dissociation of ribosomal subunits. ribosome recycling biological_process ribosome dissociation factor GO:0032790 ribosome disassembly GO:0032790 The disaggregation of a ribosome into its constituent components; includes the dissociation of ribosomal subunits. GOC:mah GOC:vk ribosome recycling GOC:db PMID:9463391 All of the contents of a plasma membrane bounded cell projection, excluding the plasma membrane surrounding the projection. cellular_component GO:0032838 plasma membrane bounded cell projection cytoplasm GO:0032838 All of the contents of a plasma membrane bounded cell projection, excluding the plasma membrane surrounding the projection. GOC:krc GOC:mah All of the contents of a dendrite, excluding the surrounding plasma membrane. dendritic cytoplasm cellular_component GO:0032839 dendrite cytoplasm GO:0032839 All of the contents of a dendrite, excluding the surrounding plasma membrane. GOC:mah Any process that modulates the frequency, rate or extent of karyogamy, the creation of a single nucleus from multiple nuclei as a result of membrane fusion. biological_process GO:0032871 regulation of karyogamy GO:0032871 Any process that modulates the frequency, rate or extent of karyogamy, the creation of a single nucleus from multiple nuclei as a result of membrane fusion. GOC:mah Any process that modulates the frequency, rate or extent of the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns. biological_process GO:0032878 regulation of establishment or maintenance of cell polarity GO:0032878 Any process that modulates the frequency, rate or extent of the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns. GOC:mah Any process that modulates the frequency, rate or extent of any process in which a cell, a substance, or a cellular entity is transported to, or maintained in, a specific location. regulation of localisation biological_process GO:0032879 regulation of localization GO:0032879 Any process that modulates the frequency, rate or extent of any process in which a cell, a substance, or a cellular entity is transported to, or maintained in, a specific location. GOC:mah regulation of localisation GOC:mah Any process that modulates the frequency, rate or extent of any process in which a protein is transported to, or maintained in, a specific location. jl 2015-01-20T14:32:14Z GO:1903827 regulation of cellular protein localisation regulation of cellular protein localization regulation of protein localisation biological_process GO:0032880 regulation of protein localization GO:0032880 Any process that modulates the frequency, rate or extent of any process in which a protein is transported to, or maintained in, a specific location. GOC:dph GOC:mah GOC:tb regulation of cellular protein localisation GOC:TermGenie regulation of protein localisation GOC:mah Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving polysaccharides. biological_process GO:0032881 regulation of polysaccharide metabolic process GO:0032881 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving polysaccharides. GOC:mah Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of polysaccharides. biological_process GO:0032885 regulation of polysaccharide biosynthetic process GO:0032885 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of polysaccharides. GOC:mah Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton. biological_process GO:0032886 regulation of microtubule-based process GO:0032886 Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton. GOC:mah Any process that modulates the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process GO:0032890 regulation of organic acid transport GO:0032890 Any process that modulates the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. down regulation of organic acid transport down-regulation of organic acid transport downregulation of organic acid transport inhibition of organic acid transport biological_process GO:0032891 negative regulation of organic acid transport GO:0032891 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:mah Any process that activates or increases the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. up regulation of organic acid transport up-regulation of organic acid transport upregulation of organic acid transport activation of organic acid transport stimulation of organic acid transport biological_process GO:0032892 positive regulation of organic acid transport GO:0032892 Any process that activates or increases the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:mah The controlled release of a substance by a cell. Wikipedia:Secretion cellular secretion biological_process GO:0032940 secretion by cell GO:0032940 The controlled release of a substance by a cell. GOC:mah The expansion of a mononuclear cell population by cell division. A mononuclear cell is a leukocyte with a single non-segmented nucleus in the mature form. PBMC proliferation peripheral blood mononuclear cell proliferation biological_process GO:0032943 mononuclear cell proliferation GO:0032943 The expansion of a mononuclear cell population by cell division. A mononuclear cell is a leukocyte with a single non-segmented nucleus in the mature form. GOC:add Any process that modulates the frequency, rate or extent of mononuclear cell proliferation. regulation of PBMC proliferation regulation of peripheral blood mononuclear cell proliferation biological_process GO:0032944 regulation of mononuclear cell proliferation GO:0032944 Any process that modulates the frequency, rate or extent of mononuclear cell proliferation. GOC:add Any process that stops, prevents, or reduces the frequency, rate or extent of mononuclear cell proliferation. negative regulation of PBMC proliferation negative regulation of peripheral blood mononuclear cell proliferation biological_process GO:0032945 negative regulation of mononuclear cell proliferation GO:0032945 Any process that stops, prevents, or reduces the frequency, rate or extent of mononuclear cell proliferation. GOC:add Any process that activates or increases the frequency, rate or extent of mononuclear cell proliferation. up regulation of mononuclear cell proliferation up-regulation of mononuclear cell proliferation upregulation of mononuclear cell proliferation activation of mononuclear cell proliferation positive regulation of PBMC proliferation positive regulation of peripheral blood mononuclear cell proliferation stimulation of mononuclear cell proliferation biological_process GO:0032946 positive regulation of mononuclear cell proliferation GO:0032946 Any process that activates or increases the frequency, rate or extent of mononuclear cell proliferation. GOC:add Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins. regulation of actin cytoskeleton organisation biological_process regulation of actin cytoskeleton organization and biogenesis GO:0032956 regulation of actin cytoskeleton organization GO:0032956 Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins. GOC:mah regulation of actin cytoskeleton organisation GOC:mah regulation of actin cytoskeleton organization and biogenesis GOC:mah The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%). collagen metabolism biological_process GO:0032963 collagen metabolic process GO:0032963 The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%). GOC:mah ISBN:0198506732 The chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%). collagen anabolism collagen biosynthesis collagen formation collagen synthesis biological_process GO:0032964 collagen biosynthetic process GO:0032964 The chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%). GOC:mah ISBN:0198506732 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. regulation of collagen anabolism regulation of collagen biosynthesis regulation of collagen formation regulation of collagen synthesis biological_process GO:0032965 regulation of collagen biosynthetic process GO:0032965 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. negative regulation of collagen anabolism negative regulation of collagen biosynthesis negative regulation of collagen formation negative regulation of collagen synthesis biological_process GO:0032966 negative regulation of collagen biosynthetic process GO:0032966 Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. GOC:mah Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. positive regulation of collagen anabolism positive regulation of collagen biosynthesis positive regulation of collagen formation positive regulation of collagen synthesis biological_process GO:0032967 positive regulation of collagen biosynthetic process GO:0032967 Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. GOC:mah Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the actin cytoskeleton. biological_process GO:0032970 regulation of actin filament-based process GO:0032970 Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the actin cytoskeleton. GOC:mah The directed movement of amino acids from inside of a cell, across the plasma membrane and into the extracellular region. jl 2012-11-14T14:27:40Z GO:0044746 amino acid export amino acid transmembrane export amino acid efflux biological_process GO:0032973 amino acid export across plasma membrane GO:0032973 The directed movement of amino acids from inside of a cell, across the plasma membrane and into the extracellular region. GOC:jl The directed movement of amino acids out of the vacuole, across the vacuolar membrane. amino acid efflux from vacuole vacuolar amino acid export biological_process GO:0032974 amino acid transmembrane export from vacuole GO:0032974 The directed movement of amino acids out of the vacuole, across the vacuolar membrane. GOC:mah The directed movement of amino acids into the vacuole across the vacuolar membrane. vacuolar amino acid import biological_process GO:0032975 amino acid transmembrane import into vacuole GO:0032975 The directed movement of amino acids into the vacuole across the vacuolar membrane. GOC:mah The disaggregation of a protein-containing macromolecular complex into its constituent components. GO:0034623 GO:0043241 GO:0043624 protein complex disassembly biological_process cellular macromolecule complex disassembly cellular protein complex disassembly macromolecule complex disassembly GO:0032984 protein-containing complex disassembly GO:0032984 The disaggregation of a protein-containing macromolecular complex into its constituent components. GOC:mah The disaggregation of a protein-RNA complex into its constituent components. RNA-protein complex disassembly RNP complex disassembly ribonucleoprotein complex disassembly biological_process GO:0032988 protein-RNA complex disassembly GO:0032988 The disaggregation of a protein-RNA complex into its constituent components. GOC:mah The process in which a cellular entity is generated and organized. A cellular entity has granularity above the level of a protein complex but below that of an anatomical system. cellular component morphogenesis cellular structure morphogenesis biological_process GO:0032989 cellular anatomical entity morphogenesis GO:0032989 The process in which a cellular entity is generated and organized. A cellular entity has granularity above the level of a protein complex but below that of an anatomical system. GOC:dph GOC:mah GOC:tb cellular structure morphogenesis GOC:dph GOC:tb A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together. GO:0043234 macromolecular complex macromolecule complex protein containing complex protein complex protein-protein complex cellular_component GO:0032991 A protein complex in this context is meant as a stable set of interacting proteins which can be co-purified by an acceptable method, and where the complex has been shown to exist as an isolated, functional unit in vivo. Acceptable experimental methods include stringent protein purification followed by detection of protein interaction. The following methods should be considered non-acceptable: simple immunoprecipitation, pull-down experiments from cell extracts without further purification, colocalization and 2-hybrid screening. Interactions that should not be captured as protein complexes include: 1) enzyme/substrate, receptor/ligand or any similar transient interactions, unless these are a critical part of the complex assembly or are required e.g. for the receptor to be functional; 2) proteins associated in a pull-down/co-immunoprecipitation assay with no functional link or any evidence that this is a defined biological entity rather than a loose-affinity complex; 3) any complex where the only evidence is based on genetic interaction data; 4) partial complexes, where some subunits (e.g. transmembrane ones) cannot be expressed as recombinant proteins and are excluded from experiments (in this case, independent evidence is necessary to find out the composition of the full complex, if known). Interactions that may be captured as protein complexes include: 1) enzyme/substrate or receptor/ligand if the complex can only assemble and become functional in the presence of both classes of subunits; 2) complexes where one of the members has not been shown to be physically linked to the other(s), but is a homologue of, and has the same functionality as, a protein that has been experimentally demonstrated to form a complex with the other member(s); 3) complexes whose existence is accepted based on localization and pharmacological studies, but for which experimental evidence is not yet available for the complex as a whole. protein-containing complex GO:0032991 A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together. GOC:dos GOC:mah The expansion of a muscle cell population by cell division. myocyte proliferation biological_process GO:0033002 muscle cell proliferation GO:0033002 The expansion of a muscle cell population by cell division. CL:0000187 GOC:mah Any apoptotic process in a myeloid cell, a cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage. apoptosis of myeloid cells myeloid cell apoptosis biological_process GO:0033028 myeloid cell apoptotic process GO:0033028 Any apoptotic process in a myeloid cell, a cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage. CL:0000763 GOC:add GOC:mtg_apoptosis PMID:11292031 PMID:15330259 PMID:17133093 Any process that modulates the frequency, rate, or extent of myeloid cell apoptotic process. regulation of myeloid cell apoptosis biological_process GO:0033032 regulation of myeloid cell apoptotic process GO:0033032 Any process that modulates the frequency, rate, or extent of myeloid cell apoptotic process. GOC:add GOC:mtg_apoptosis Any process that stops, prevents, or reduces the frequency, rate, or extent of a myeloid cell apoptotic process. down regulation of myeloid cell apoptosis down-regulation of myeloid cell apoptosis downregulation of myeloid cell apoptosis inhibition of myeloid cell apoptosis negative regulation of myeloid cell apoptosis biological_process GO:0033033 negative regulation of myeloid cell apoptotic process GO:0033033 Any process that stops, prevents, or reduces the frequency, rate, or extent of a myeloid cell apoptotic process. GOC:add GOC:mtg_apoptosis Any process that activates or increases the frequency, rate, or extent of myeloid cell apoptotic process. up regulation of myeloid cell apoptosis up-regulation of myeloid cell apoptosis upregulation of myeloid cell apoptosis activation of myeloid cell apoptosis positive regulation of myeloid cell apoptosis stimulation of myeloid cell apoptosis biological_process GO:0033034 positive regulation of myeloid cell apoptotic process GO:0033034 Any process that activates or increases the frequency, rate, or extent of myeloid cell apoptotic process. GOC:add GOC:mtg_apoptosis Any process in which a macromolecule is transported to, or maintained in, a specific location. macromolecule localisation biological_process GO:0033036 macromolecule localization GO:0033036 Any process in which a macromolecule is transported to, or maintained in, a specific location. GOC:mah macromolecule localisation GOC:mah Any process in which a polysaccharide is transported to, or maintained in, a specific location. polysaccharide localisation biological_process GO:0033037 polysaccharide localization GO:0033037 Any process in which a polysaccharide is transported to, or maintained in, a specific location. GOC:mah polysaccharide localisation GOC:mah Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle. regulation of organelle organisation biological_process regulation of organelle organization and biogenesis GO:0033043 regulation of organelle organization GO:0033043 Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle. GOC:mah regulation of organelle organisation GOC:mah regulation of organelle organization and biogenesis GOC:mah Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a chromosome. regulation of chromosome organisation biological_process regulation of chromosome organization and biogenesis GO:0033044 regulation of chromosome organization GO:0033044 Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a chromosome. GOC:mah regulation of chromosome organisation GOC:mah regulation of chromosome organization and biogenesis GOC:mah Any process that modulates the frequency, rate or extent of sister chromatid segregation. biological_process GO:0033045 regulation of sister chromatid segregation GO:0033045 Any process that modulates the frequency, rate or extent of sister chromatid segregation. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of sister chromatid segregation. biological_process GO:0033046 negative regulation of sister chromatid segregation GO:0033046 Any process that stops, prevents, or reduces the frequency, rate or extent of sister chromatid segregation. GOC:mah Any process that modulates the frequency, rate or extent of sister chromatid segregation during mitosis. biological_process GO:0033047 regulation of mitotic sister chromatid segregation GO:0033047 Any process that modulates the frequency, rate or extent of sister chromatid segregation during mitosis. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of sister chromatid segregation during mitosis. biological_process GO:0033048 negative regulation of mitotic sister chromatid segregation GO:0033048 Any process that stops, prevents, or reduces the frequency, rate or extent of sister chromatid segregation during mitosis. GOC:mah The deposition or aggregation of coloring matter in a cell. biological_process GO:0033059 cellular pigmentation GO:0033059 The deposition or aggregation of coloring matter in a cell. GOC:mtg_MIT_16mar07 Any process that modulates the frequency, rate or extent of the directed movement of proteins within cells. biological_process GO:0033157 regulation of intracellular protein transport GO:0033157 Any process that modulates the frequency, rate or extent of the directed movement of proteins within cells. GOC:mah Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform amines. regulation of amine metabolism regulation of cellular amine metabolic process biological_process GO:0033238 regulation of amine metabolic process GO:0033238 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform amines. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amines. negative regulation of amine metabolism negative regulation of cellular amine metabolic process biological_process GO:0033239 negative regulation of amine metabolic process GO:0033239 Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amines. GOC:mah Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amines. positive regulation of amine metabolism positive regulation of cellular amine metabolic process biological_process GO:0033240 positive regulation of amine metabolic process GO:0033240 Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amines. GOC:mah The multiplication or reproduction of cells, resulting in the expansion of a cell population in the midbrain. cell proliferation in mesencephalon biological_process mesencepahalic cell proliferation GO:0033278 cell proliferation in midbrain GO:0033278 The multiplication or reproduction of cells, resulting in the expansion of a cell population in the midbrain. GOC:dgf GO_REF:0000021 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a secretory granule. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. secretory granule organisation biological_process secretory granule organization and biogenesis GO:0033363 secretory granule organization GO:0033363 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a secretory granule. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. GOC:mah secretory granule organisation GOC:mah secretory granule organization and biogenesis GOC:mah A process in which a protein is transported to, or maintained in, a location within an organelle. protein localisation to organelle protein localization in organelle biological_process GO:0033365 protein localization to organelle GO:0033365 A process in which a protein is transported to, or maintained in, a location within an organelle. GOC:mah protein localisation to organelle GOC:mah protein localization in organelle GOC:mah A process in which a protein is transported to, or maintained in, a location within a secretory granule. protein localisation in secretory granule protein localization in secretory granule biological_process GO:0033366 protein localization to secretory granule GO:0033366 A process in which a protein is transported to, or maintained in, a location within a secretory granule. GOC:mah protein localisation in secretory granule GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a catecholamine. down regulation of catecholamine secretion down-regulation of catecholamine secretion downregulation of catecholamine secretion inhibition of catecholamine secretion biological_process GO:0033604 negative regulation of catecholamine secretion GO:0033604 Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a catecholamine. GOC:mah Any process that activates or increases the frequency, rate or extent of the regulated release of a catecholamine. up regulation of catecholamine secretion up-regulation of catecholamine secretion upregulation of catecholamine secretion activation of catecholamine secretion stimulation of catecholamine secretion biological_process GO:0033605 positive regulation of catecholamine secretion GO:0033605 Any process that activates or increases the frequency, rate or extent of the regulated release of a catecholamine. GOC:mah A process in which a ribosome is transported to, and/or maintained in, a specific location. GO:0033753 biological_process establishment of ribosome localisation establishment of ribosome localization ribosome localisation GO:0033750 ribosome localization GO:0033750 A process in which a ribosome is transported to, and/or maintained in, a specific location. GOC:mah Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucagon stimulus. response to glucagon stimulus biological_process GO:0033762 response to glucagon GO:0033762 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucagon stimulus. GOC:sl response to glucagon stimulus GOC:dos Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid stimulus. biological_process GO:0033993 response to lipid GO:0033993 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid stimulus. GOC:sl A process in which a protein is transported to, or maintained in, a location within the Golgi apparatus. mah 2011-02-14T02:26:36Z GO:0000042 GO:0072600 protein localisation in Golgi apparatus protein localization in Golgi apparatus establishment of protein localisation to Golgi establishment of protein localization in Golgi establishment of protein localization to Golgi establishment of protein localization to Golgi apparatus biological_process protein targeting to Golgi protein-Golgi targeting GO:0034067 protein localization to Golgi apparatus GO:0034067 A process in which a protein is transported to, or maintained in, a location within the Golgi apparatus. GOC:mah protein localisation in Golgi apparatus GOC:mah establishment of protein localisation to Golgi GOC:mah establishment of protein localization to Golgi apparatus GOC:mah Any process of regulating the production and elimination of erythrocytes within an organism. RBC homeostasis red blood cell homeostasis biological_process GO:0034101 erythrocyte homeostasis GO:0034101 Any process of regulating the production and elimination of erythrocytes within an organism. GOC:add PMID:10694114 PMID:14754397 RBC homeostasis CL:0000232 red blood cell homeostasis CL:0000232 The process in which a carbohydrate is transported across a membrane. carbohydrate membrane transport transmembrane carbohydrate transport biological_process GO:0034219 Note that this term is not intended for use in annotating lateral movement within membranes. carbohydrate transmembrane transport GO:0034219 The process in which a carbohydrate is transported across a membrane. GOC:mah transmembrane carbohydrate transport GOC:dph GOC:tb A process in which a monoatomic ion is transported across a membrane. Monatomic ions (also called simple ions) are ions consisting of exactly one atom. GO:0099131 ion transmembrane transport Reactome:R-HSA-983712 ion membrane transport transmembrane ion transport ATP hydrolysis coupled ion transmembrane transport biological_process GO:0034220 Note that this term is not intended for use in annotating lateral movement within membranes. monoatomic ion transmembrane transport GO:0034220 A process in which a monoatomic ion is transported across a membrane. Monatomic ions (also called simple ions) are ions consisting of exactly one atom. GOC:mah Reactome:R-HSA-983712 Ion channel transport transmembrane ion transport GOC:dph GOC:tb Any process that decreases the frequency, rate or extent of the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells. biological_process GO:0034242 negative regulation of syncytium formation by plasma membrane fusion GO:0034242 Any process that decreases the frequency, rate or extent of the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells. GOC:mah Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving amides. regulation of amide metabolism regulation of cellular amide metabolic process biological_process GO:0034248 regulation of amide metabolic process GO:0034248 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving amides. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amides. negative regulation of amide metabolism negative regulation of cellular amide metabolic process biological_process GO:0034249 negative regulation of amide metabolic process GO:0034249 Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amides. GOC:mah Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amides. positive regulation of amide metabolism positive regulation of cellular amide metabolic process biological_process GO:0034250 positive regulation of amide metabolic process GO:0034250 Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amides. GOC:mah A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a cell junction. Reactome:R-HSA-446728 biological_process GO:0034329 cell junction assembly GO:0034329 A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a cell junction. GOC:mah Reactome:R-HSA-446728 Cell junction organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell junction. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix. cell junction assembly and maintenance cell junction organisation biological_process cell junction biogenesis GO:0034330 cell junction organization GO:0034330 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell junction. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix. GOC:dph GOC:jl GOC:mah cell junction organisation GOC:mah Any apoptotic process in a glial cell, a non-neuronal cell of the nervous system. apoptosis of glia apoptosis of glial cells glia apoptosis glia programmed cell death by apoptosis glial cell programmed cell death by apoptosis programmed cell death of glia by apoptosis programmed cell death of glial cells by apoptosis programmed cell death, glia programmed cell death, glial cells glial cell apoptosis biological_process GO:0034349 glial cell apoptotic process GO:0034349 Any apoptotic process in a glial cell, a non-neuronal cell of the nervous system. CL:0000125 GOC:mtg_apoptosis GOC:sart Any process that modulates the frequency, rate, or extent of glial cell apoptotic process. biological_process regulation of glial cell apoptosis GO:0034350 regulation of glial cell apoptotic process GO:0034350 Any process that modulates the frequency, rate, or extent of glial cell apoptotic process. GOC:mah GOC:mtg_apoptosis Any process that stops, prevents, or reduces the frequency, rate, or extent of glial cell apoptotic process. down regulation of glial cell apoptosis down-regulation of glial cell apoptosis downregulation of glial cell apoptosis inhibition of glial cell apoptosis negative regulation of glial cell apoptosis biological_process GO:0034351 negative regulation of glial cell apoptotic process GO:0034351 Any process that stops, prevents, or reduces the frequency, rate, or extent of glial cell apoptotic process. GOC:mah GOC:mtg_apoptosis Any process that activates or increases the frequency, rate, or extent of glial cell apoptotic process. up regulation of glial cell apoptosis up-regulation of glial cell apoptosis upregulation of glial cell apoptosis activation of glial cell apoptosis positive regulation of glial cell apoptosis stimulation of glial cell apoptosis biological_process GO:0034352 positive regulation of glial cell apoptotic process GO:0034352 Any process that activates or increases the frequency, rate, or extent of glial cell apoptotic process. GOC:mah GOC:mtg_apoptosis Any apoptotic process in a smooth muscle cell. Smooth muscle consists of non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. SMC apoptosis apoptosis of smooth muscle cells programmed cell death of smooth muscle cells by apoptosis programmed cell death, smooth muscle cells smooth muscle cell programmed cell death by apoptosis smooth muscle cell apoptosis biological_process GO:0034390 smooth muscle cell apoptotic process GO:0034390 Any apoptotic process in a smooth muscle cell. Smooth muscle consists of non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. CL:0000192 GOC:BHF GOC:mah GOC:mtg_apoptosis GOC:rl Any process that modulates the frequency, rate, or extent of smooth muscle cell apoptotic process. regulation of SMC apoptosis regulation of smooth muscle cell apoptosis biological_process GO:0034391 regulation of smooth muscle cell apoptotic process GO:0034391 Any process that modulates the frequency, rate, or extent of smooth muscle cell apoptotic process. GOC:BHF GOC:mtg_apoptosis GOC:rl Any process that stops, prevents, or reduces the frequency, rate, or extent of smooth muscle cell apoptotic process. down regulation of smooth muscle cell apoptosis down-regulation of smooth muscle cell apoptosis downregulation of smooth muscle cell apoptosis negative regulation of SMC apoptosis inhibition of smooth muscle cell apoptosis negative regulation of smooth muscle cell apoptosis biological_process GO:0034392 negative regulation of smooth muscle cell apoptotic process GO:0034392 Any process that stops, prevents, or reduces the frequency, rate, or extent of smooth muscle cell apoptotic process. GOC:BHF GOC:mtg_apoptosis GOC:rl Any process that activates or increases the frequency, rate, or extent of smooth muscle cell apoptotic process. positive regulation of SMC apoptosis up regulation of smooth muscle cell apoptosis up-regulation of smooth muscle cell apoptosis upregulation of smooth muscle cell apoptosis activation of smooth muscle cell apoptosis positive regulation of smooth muscle cell apoptosis stimulation of smooth muscle cell apoptosis biological_process GO:0034393 positive regulation of smooth muscle cell apoptotic process GO:0034393 Any process that activates or increases the frequency, rate, or extent of smooth muscle cell apoptotic process. GOC:BHF GOC:mtg_apoptosis GOC:rl The directed movement of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process GO:0034436 glycoprotein transport GO:0034436 The directed movement of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:BHF GOC:mah GOC:rl The process in which a solute is transported from one side of the vacuolar membrane to the other. vacuolar membrane transport biological_process GO:0034486 Note that this term is not intended for use in annotating lateral movement within membranes. vacuolar transmembrane transport GO:0034486 The process in which a solute is transported from one side of the vacuolar membrane to the other. GOC:mah The process in which an amino acid is transported from one side of the vacuolar membrane to the other. vacuolar amino acid membrane transport biological_process GO:0034487 Note that this term is not intended for use in annotating lateral movement within membranes. vacuolar amino acid transmembrane transport GO:0034487 The process in which an amino acid is transported from one side of the vacuolar membrane to the other. GOC:mah Any process in which a protein is transported to, or maintained at, a specific location on a chromosome. protein localisation to chromosome condensin localization to chromosome biological_process GO:0034502 protein localization to chromosome GO:0034502 Any process in which a protein is transported to, or maintained at, a specific location on a chromosome. GOC:mah protein localisation to chromosome GOC:mah A process in which a protein transports or maintains the localization of another protein to the nucleus. 2012-11-07T15:45:54Z GO:0044744 protein localisation to nucleus protein localization in cell nucleus protein localization in nucleus biological_process protein targeting to nucleus GO:0034504 protein localization to nucleus GO:0034504 A process in which a protein transports or maintains the localization of another protein to the nucleus. GOC:ecd protein localisation to nucleus GOC:mah protein localization in nucleus GOC:mah The chemical reactions and pathways resulting in the formation of nucleobases, nucleosides, nucleotides and nucleic acids. nucleobase, nucleoside, nucleotide and nucleic acid anabolism nucleobase, nucleoside, nucleotide and nucleic acid biosynthesis nucleobase, nucleoside, nucleotide and nucleic acid formation nucleobase, nucleoside, nucleotide and nucleic acid synthesis biological_process GO:0034654 nucleobase-containing compound biosynthetic process GO:0034654 The chemical reactions and pathways resulting in the formation of nucleobases, nucleosides, nucleotides and nucleic acids. GOC:mah Any process that modulates the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other. regulation of membrane transport biological_process GO:0034762 regulation of transmembrane transport GO:0034762 Any process that modulates the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other. down regulation of transmembrane transport down-regulation of transmembrane transport downregulation of transmembrane transport negative regulation of membrane transport inhibition of transmembrane transport biological_process GO:0034763 negative regulation of transmembrane transport GO:0034763 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other. GOC:mah Any process that activates or increases the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other. positive regulation of membrane transport up regulation of transmembrane transport up-regulation of transmembrane transport upregulation of transmembrane transport activation of transmembrane transport stimulation of transmembrane transport biological_process GO:0034764 positive regulation of transmembrane transport GO:0034764 Any process that activates or increases the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other. GOC:mah Any process that modulates the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other. regulation of ion transmembrane transport regulation of ion membrane transport regulation of transmembrane ion transport biological_process GO:0034765 regulation of monoatomic ion transmembrane transport GO:0034765 Any process that modulates the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other. GOC:mah regulation of transmembrane ion transport GOC:dph GOC:tb Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other. negative regulation of ion transmembrane transport down regulation of transmembrane ion transport down-regulation of transmembrane ion transport downregulation of transmembrane ion transport negative regulation of ion membrane transport negative regulation of transmembrane ion transport inhibition of transmembrane ion transport biological_process GO:0034766 negative regulation of monoatomic ion transmembrane transport GO:0034766 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other. GOC:mah negative regulation of transmembrane ion transport GOC:dph GOC:tb Any process that activates or increases the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other. positive regulation of ion transmembrane transport positive regulation of ion membrane transport positive regulation of transmembrane ion transport up regulation of transmembrane ion transport up-regulation of transmembrane ion transport upregulation of transmembrane ion transport activation of transmembrane ion transport stimulation of transmembrane ion transport biological_process GO:0034767 positive regulation of monoatomic ion transmembrane transport GO:0034767 Any process that activates or increases the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other. GOC:mah The controlled breakdown of the basement membrane in the context of a normal process such as imaginal disc eversion. dph 2009-08-13T11:27:24Z GO:0060881 biological_process basal lamina disassembly GO:0034769 Note that this term has no relationship to 'membrane disassembly ; GO:0030397' because the basement membrane is not a lipid bilayer. basement membrane disassembly GO:0034769 The controlled breakdown of the basement membrane in the context of a normal process such as imaginal disc eversion. GOC:sart PMID:17301221 The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure. The heart tube forms as the heart rudiment from the heart field. biological_process GO:0035050 embryonic heart tube development GO:0035050 The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure. The heart tube forms as the heart rudiment from the heart field. GOC:go_curators The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell that will form part of the cardiac organ of an individual. cardiac cell differentiation heart cell differentiation biological_process GO:0035051 cardiocyte differentiation GO:0035051 The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell that will form part of the cardiac organ of an individual. GOC:bf The assembly and organization of an axoneme, the bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements. GO:0035083 GO:0035084 ciliary axoneme assembly cilium axoneme assembly flagellar axoneme assembly flagellum axoneme assembly biological_process axoneme biogenesis cilium axoneme biogenesis GO:0035082 Note that cilia and eukaryotic flagella are deemed to be equivalent. axoneme assembly GO:0035082 The assembly and organization of an axoneme, the bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements. GOC:bf GOC:cilia GOC:jl ISBN:0815316194 axoneme biogenesis GOC:mah cilium axoneme biogenesis GOC:mah The process in which the anatomical structures of appendages are generated and organized. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch. biological_process GO:0035107 appendage morphogenesis GO:0035107 The process in which the anatomical structures of appendages are generated and organized. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch. ISBN:0582227089 The process in which the anatomical structures of genitalia are generated and organized. The genitalia are the organs of reproduction or generation, external and internal. biological_process genital morphogenesis GO:0035112 genitalia morphogenesis GO:0035112 The process in which the anatomical structures of genitalia are generated and organized. The genitalia are the organs of reproduction or generation, external and internal. GOC:bf Creation of the central hole of a tube in an anatomical structure through which gases and/or liquids flow. tube lumen formation biological_process lumen formation in an anatomical structure GO:0035148 tube formation GO:0035148 Creation of the central hole of a tube in an anatomical structure through which gases and/or liquids flow. GOC:bf tube lumen formation GOC:dph GOC:mah lumen formation in an anatomical structure GOC:dph GOC:mah The directed movement of nuclei within the syncytial embryo of insects. These precise temporal and spatial patterns of nuclear movement are coordinated with mitotic divisions and are required during blastoderm formation to reposition dividing nuclei from the interior of the syncytial embryo to the cortex. biological_process GO:0035190 syncytial nuclear migration GO:0035190 The directed movement of nuclei within the syncytial embryo of insects. These precise temporal and spatial patterns of nuclear movement are coordinated with mitotic divisions and are required during blastoderm formation to reposition dividing nuclei from the interior of the syncytial embryo to the cortex. GOC:bf ISBN:0879694238 PMID:8314839 Programmed cell death of an errant germ line cell that is outside the normal migratory path or ectopic to the gonad. This is an important mechanism of regulating germ cell survival within the embryo. programmed cell death of ectopic germ cells programmed cell death, ectopic germ cells biological_process GO:0035234 ectopic germ cell programmed cell death GO:0035234 Programmed cell death of an errant germ line cell that is outside the normal migratory path or ectopic to the gonad. This is an important mechanism of regulating germ cell survival within the embryo. PMID:12814944 The process in which the anatomical structures of a tube are generated and organized. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system. biological_process GO:0035239 tube morphogenesis GO:0035239 The process in which the anatomical structures of a tube are generated and organized. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system. GOC:bf PMID:14624839 The process in which the anatomical structures of the internal genitalia are generated and organized. The internal genitalia are the internal sex organs such as the uterine tube, the uterus and the vagina in female mammals, and the testis, seminal vesicle, ejaculatory duct and prostate in male mammals. biological_process GO:0035260 internal genitalia morphogenesis GO:0035260 The process in which the anatomical structures of the internal genitalia are generated and organized. The internal genitalia are the internal sex organs such as the uterine tube, the uterus and the vagina in female mammals, and the testis, seminal vesicle, ejaculatory duct and prostate in male mammals. PMID:24793987 PMID:25247640 The process in which the anatomical structures of the external genitalia are generated and organized. The external genitalia are the outer sex organs, such as the penis or vulva in mammals. biological_process GO:0035261 external genitalia morphogenesis GO:0035261 The process in which the anatomical structures of the external genitalia are generated and organized. The external genitalia are the outer sex organs, such as the penis or vulva in mammals. PMID:24793987 PMID:25247640 The process in which the anatomical structures of the gonads are generated and organized. A gonad is an animal organ producing gametes, e.g. the testes or the ovary in mammals. biological_process GO:0035262 gonad morphogenesis GO:0035262 The process in which the anatomical structures of the gonads are generated and organized. A gonad is an animal organ producing gametes, e.g. the testes or the ovary in mammals. ISBN:0198612001 The increase in size or mass of an entire multicellular organism, as opposed to cell growth. biological_process body growth GO:0035264 multicellular organism growth GO:0035264 The increase in size or mass of an entire multicellular organism, as opposed to cell growth. GOC:bf GOC:curators GOC:dph GOC:tb The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function. biological_process GO:0035265 organ growth GO:0035265 The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function. GOC:bf ISBN:0471245208 ISBN:0721662544 Progression of the endocrine system over time, from its formation to a mature structure. The endocrine system is a system of hormones and ductless glands, where the glands release hormones directly into the blood, lymph or other intercellular fluid, and the hormones circulate within the body to affect distant organs. The major glands that make up the human endocrine system are the hypothalamus, pituitary, thyroid, parathryoids, adrenals, pineal body, and the reproductive glands which include the ovaries and testes. biological_process GO:0035270 endocrine system development GO:0035270 Progression of the endocrine system over time, from its formation to a mature structure. The endocrine system is a system of hormones and ductless glands, where the glands release hormones directly into the blood, lymph or other intercellular fluid, and the hormones circulate within the body to affect distant organs. The major glands that make up the human endocrine system are the hypothalamus, pituitary, thyroid, parathryoids, adrenals, pineal body, and the reproductive glands which include the ovaries and testes. GOC:bf Wikipedia:Development_of_the_endocrine_system Progression of the exocrine system over time, from its formation to a mature structure. The exocrine system is a system of hormones and glands, where the glands secrete straight to a target site via ducts or tubes. The human exocrine system includes the salivary glands, sweat glands and many glands of the digestive system. biological_process GO:0035272 exocrine system development GO:0035272 Progression of the exocrine system over time, from its formation to a mature structure. The exocrine system is a system of hormones and glands, where the glands secrete straight to a target site via ducts or tubes. The human exocrine system includes the salivary glands, sweat glands and many glands of the digestive system. GOC:bf Wikipedia:Exocrine_gland The regionalization process that divides an organism or part of an organism into a series of semi-repetitive parts, or segments, often arranged along a longitudinal axis. Wikipedia:Segmentation_(biology) biological_process GO:0035282 segmentation GO:0035282 The regionalization process that divides an organism or part of an organism into a series of semi-repetitive parts, or segments, often arranged along a longitudinal axis. PMID:10611687 PMID:9706689 Partitioning of the blastoderm embryo into trunk segmental units. In Drosophila, the trunk segments include thoracic segments and abdominal segments A1 to A8. biological_process GO:0035290 trunk segmentation GO:0035290 Partitioning of the blastoderm embryo into trunk segmental units. In Drosophila, the trunk segments include thoracic segments and abdominal segments A1 to A8. PMID:1360402 The process whose specific outcome is the progression of a tube over time, from its initial formation to a mature structure. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues including lung and trachea, kidney, the mammary gland, the vascular system and the gastrointestinal and urinary-genital tracts. biological_process GO:0035295 tube development GO:0035295 The process whose specific outcome is the progression of a tube over time, from its initial formation to a mature structure. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues including lung and trachea, kidney, the mammary gland, the vascular system and the gastrointestinal and urinary-genital tracts. PMID:12526790 A process in which a protein is transported to, or maintained at, a microtubule. bf 2010-03-11T11:00:56Z protein localisation to microtubule biological_process GO:0035372 protein localization to microtubule GO:0035372 A process in which a protein is transported to, or maintained at, a microtubule. GOC:bf GOC:lb protein localisation to microtubule GOC:mah Any process in which a protein is transported to, and/or maintained at the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell. bf 2010-03-29T10:58:53Z protein localisation to synapse biological_process GO:0035418 protein localization to synapse GO:0035418 Any process in which a protein is transported to, and/or maintained at the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell. GOC:bf protein localisation to synapse GOC:mah The process in which acetate is transported across a membrane. Acetate is the 2-carbon carboxylic acid ethanoic acid. bf 2010-04-08T10:59:01Z acetate membrane transport biological_process GO:0035433 Note that this term is not intended for use in annotating lateral movement within membranes. acetate transmembrane transport GO:0035433 The process in which acetate is transported across a membrane. Acetate is the 2-carbon carboxylic acid ethanoic acid. GOC:vw The orderly movement of a cell from one site to another that will contribute to the differentiation of an endothelial cell that will form de novo blood vessels and tubes. bf 2010-04-09T03:53:01Z biological_process GO:0035441 cell migration involved in vasculogenesis GO:0035441 The orderly movement of a cell from one site to another that will contribute to the differentiation of an endothelial cell that will form de novo blood vessels and tubes. GOC:dgh The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell. bf 2010-05-14T01:14:37Z GO:0007242 GO:0007243 GO:0023013 GO:0023034 intracellular signal transduction pathway signal transmission via intracellular cascade biological_process intracellular signaling cascade intracellular signaling pathway GO:0035556 intracellular signal transduction GO:0035556 The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell. GOC:bf GOC:jl GOC:signaling ISBN:3527303782 intracellular signaling cascade GOC:signaling The directed movement of a protein to a specific location within the extracellular region. bf 2010-11-09T10:25:08Z establishment of protein localisation in extracellular region establishment of protein localization in extracellular region biological_process GO:0035592 establishment of protein localization to extracellular region GO:0035592 The directed movement of a protein to a specific location within the extracellular region. GOC:BHF GOC:bf establishment of protein localisation in extracellular region GOC:mah The orderly movement of a hematopoietic stem cell from one site to another. A hematopoietic stem cell is a cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system. bf 2011-02-28T03:20:36Z hemopoietic stem cell migration biological_process GO:0035701 hematopoietic stem cell migration GO:0035701 The orderly movement of a hematopoietic stem cell from one site to another. A hematopoietic stem cell is a cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system. CL:0000037 GOC:BHF PMID:20234092 hemopoietic stem cell migration CL:0000037 The bidirectional movement of large protein complexes along microtubules within a cilium that contributes to cilium assembly. bf 2011-03-17T10:55:42Z intraflagellar transport Reactome:R-HSA-5620924 biological_process intraciliary transport involved in cilium morphogenesis intraflagellar transport involved in cilium morphogenesis GO:0035735 intraciliary transport involved in cilium assembly GO:0035735 The bidirectional movement of large protein complexes along microtubules within a cilium that contributes to cilium assembly. GOC:bf GOC:cilia Reactome:R-HSA-5620924 Intraflagellar transport The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to compound eye morphogenesis. bf 2011-03-17T10:57:03Z biological_process GO:0035736 cell proliferation involved in compound eye morphogenesis GO:0035736 The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to compound eye morphogenesis. GOC:bf GOC:sart The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an angioblast cell. Angioblasts are one of the two products formed from hemangioblast cells (the other being pluripotent hemopoietic stem cells). bf 2011-04-04T11:10:38Z angioblastic mesenchymal cell differentiation biological_process GO:0035779 angioblast cell differentiation GO:0035779 The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an angioblast cell. Angioblasts are one of the two products formed from hemangioblast cells (the other being pluripotent hemopoietic stem cells). CL:0000566 GOC:yaf angioblastic mesenchymal cell differentiation CL:0000566 The chemical reactions and pathways involving an indole alkaloid, an alkaloid containing an indole skeleton. bf 2011-05-04T03:17:44Z indole alkaloid metabolism biological_process GO:0035834 indole alkaloid metabolic process GO:0035834 The chemical reactions and pathways involving an indole alkaloid, an alkaloid containing an indole skeleton. GOC:yaf indole alkaloid metabolism GOC:bf The chemical reactions and pathways resulting in the formation of an indole alkaloid, an alkaloid containing an indole skeleton. bf 2011-05-04T03:18:31Z indole alkaloid anabolism indole alkaloid biosynthesis indole alkaloid formation indole alkaloid synthesis biological_process GO:0035835 indole alkaloid biosynthetic process GO:0035835 The chemical reactions and pathways resulting in the formation of an indole alkaloid, an alkaloid containing an indole skeleton. GOC:yaf indole alkaloid anabolism GOC:bf indole alkaloid biosynthesis GOC:bf indole alkaloid formation GOC:bf indole alkaloid synthesis GOC:bf The process whose specific outcome is the progression of a megakaryocyte cell over time, from its formation to the mature structure. Megakaryocyte development does not include the steps involved in committing a cell to a megakaryocyte fate. A megakaryocyte is a giant cell 50 to 100 micron in diameter, with a greatly lobulated nucleus, found in the bone marrow. bf 2011-05-13T01:28:06Z megakaryocyte cell development biological_process GO:0035855 megakaryocyte development GO:0035855 The process whose specific outcome is the progression of a megakaryocyte cell over time, from its formation to the mature structure. Megakaryocyte development does not include the steps involved in committing a cell to a megakaryocyte fate. A megakaryocyte is a giant cell 50 to 100 micron in diameter, with a greatly lobulated nucleus, found in the bone marrow. CL:0000556 GOC:BHF GOC:vk megakaryocyte cell development GOC:bf A region of the cilium between the basal body and proximal segment that is characterized by Y-shaped assemblages that connect axonemal microtubules to the ciliary membrane. The ciliary transition zone appears to function as a gate that controls ciliary membrane composition and separates the cytosol from the ciliary plasm. bf 2011-05-25T03:09:58Z cilial transition zone cilium transition zone cellular_component connecting cilium GO:0035869 Depending on the species, this region may have a distinct geometrically shaped electron-dense structure within the axonemal lumen visible in electron microscopy images; most animals don't display this inner structure. The axoneme extends through the ciliary transition zone, but only consists of the outer doublets. The central pair, axonemal spokes, and dynein complexes are not found in this part of the ciliary shaft. Note that the connecting cilium of the photoreceptor cells is thought to be equivalent to the transition zone. ciliary transition zone GO:0035869 A region of the cilium between the basal body and proximal segment that is characterized by Y-shaped assemblages that connect axonemal microtubules to the ciliary membrane. The ciliary transition zone appears to function as a gate that controls ciliary membrane composition and separates the cytosol from the ciliary plasm. GOC:cilia GOC:kmv PMID:21422230 The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of an enteroendocrine cell. Enteroendocrine cells are hormonally active epithelial cells in the gut that constitute the diffuse neuroendocrine system. bf 2011-06-06T11:48:51Z biological_process GO:0035883 enteroendocrine cell differentiation GO:0035883 The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of an enteroendocrine cell. Enteroendocrine cells are hormonally active epithelial cells in the gut that constitute the diffuse neuroendocrine system. CL:0000164 GOC:bf The process in which a relatively unspecialized cell acquires specialized features of a vascular smooth muscle cell. bf 2011-06-08T11:23:52Z VSMC differentiation vascular smooth muscle cell differentiation biological_process GO:0035886 vascular associated smooth muscle cell differentiation GO:0035886 The process in which a relatively unspecialized cell acquires specialized features of a vascular smooth muscle cell. GOC:sl PMID:16151017 PMID:18267954 VSMC differentiation PMID:16151017 The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell surrounding the aorta. bf 2011-06-08T11:34:26Z biological_process GO:0035887 aortic smooth muscle cell differentiation GO:0035887 The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell surrounding the aorta. GOC:sl The progression of the aorta over time, from its initial formation to the mature structure. An aorta is an artery that carries blood from the heart to other parts of the body. bf 2011-06-24T11:00:07Z biological_process GO:0035904 aorta development GO:0035904 The progression of the aorta over time, from its initial formation to the mature structure. An aorta is an artery that carries blood from the heart to other parts of the body. GOC:bf GOC:dgh MA:0000062 UBERON:0000947 Wikipedia:Aorta The progression of the ascending aorta over time, from its initial formation to the mature structure. The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta. In a two-pass circulatory system blood passes twice through the heart to supply the body once. bf 2011-06-24T11:02:01Z biological_process GO:0035905 ascending aorta development GO:0035905 The progression of the ascending aorta over time, from its initial formation to the mature structure. The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta. In a two-pass circulatory system blood passes twice through the heart to supply the body once. GOC:bf GOC:dgh MA:0002570 UBERON:0001496 Wikipedia:Ascending_aorta The progression of the descending aorta over time, from its initial formation to the mature structure. The descending aorta is the portion of the aorta in a two-pass circulatory system from the arch of aorta to the point where it divides into the common iliac arteries. In a two-pass circulatory system blood passes twice through the heart to supply the body once. bf 2011-06-24T11:05:22Z biological_process GO:0035906 descending aorta development GO:0035906 The progression of the descending aorta over time, from its initial formation to the mature structure. The descending aorta is the portion of the aorta in a two-pass circulatory system from the arch of aorta to the point where it divides into the common iliac arteries. In a two-pass circulatory system blood passes twice through the heart to supply the body once. GOC:bf GOC:dgh MA:0002571 UBERON:0001514 Wikipedia:Descending_aorta The progression of the dorsal aorta over time, from its initial formation to the mature structure. The dorsal aorta is a blood vessel in a single-pass circulatory system that carries oxygenated blood from the gills to the rest of the body. In a single-pass circulatory system blood passes once through the heart to supply the body once. bf 2011-06-24T11:07:01Z biological_process GO:0035907 dorsal aorta development GO:0035907 The progression of the dorsal aorta over time, from its initial formation to the mature structure. The dorsal aorta is a blood vessel in a single-pass circulatory system that carries oxygenated blood from the gills to the rest of the body. In a single-pass circulatory system blood passes once through the heart to supply the body once. GOC:bf GOC:dgh UBERON:0005805 Wikipedia:Aorta ZFA:0000014 The process in which the anatomical structures of an aorta are generated and organized. An aorta is an artery that carries blood from the heart to other parts of the body. bf 2011-06-24T11:11:11Z biological_process GO:0035909 aorta morphogenesis GO:0035909 The process in which the anatomical structures of an aorta are generated and organized. An aorta is an artery that carries blood from the heart to other parts of the body. GOC:bf GOC:dgh MA:0000062 UBERON:0000947 Wikipedia:Aorta The process in which the anatomical structures of the ascending aorta are generated and organized. The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta. In a two-pass circulatory system blood passes twice through the heart to supply the body once. bf 2011-06-24T11:14:52Z biological_process GO:0035910 ascending aorta morphogenesis GO:0035910 The process in which the anatomical structures of the ascending aorta are generated and organized. The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta. In a two-pass circulatory system blood passes twice through the heart to supply the body once. GOC:bf GOC:dgh MA:0002570 UBERON:0001496 Wikipedia:Ascending_aorta The process in which the anatomical structures of the descending aorta are generated and organized. The descending aorta is the portion of the aorta in a two-pass circulatory system from the arch of aorta to the point where it divides into the common iliac arteries. In a two-pass circulatory system blood passes twice through the heart to supply the body once. bf 2011-06-24T11:19:24Z biological_process GO:0035911 descending aorta morphogenesis GO:0035911 The process in which the anatomical structures of the descending aorta are generated and organized. The descending aorta is the portion of the aorta in a two-pass circulatory system from the arch of aorta to the point where it divides into the common iliac arteries. In a two-pass circulatory system blood passes twice through the heart to supply the body once. GOC:bf GOC:dgh MA:0002571 UBERON:0001514 Wikipedia:Descending_aorta The process in which the anatomical structures of the dorsal aorta are generated and organized. The dorsal aorta is a blood vessel in a single-pass circulatory system that carries oxygenated blood from the gills to the rest of the body. In a single-pass circulatory system blood passes once through the heart to supply the body once. bf 2011-06-24T11:22:14Z biological_process GO:0035912 dorsal aorta morphogenesis GO:0035912 The process in which the anatomical structures of the dorsal aorta are generated and organized. The dorsal aorta is a blood vessel in a single-pass circulatory system that carries oxygenated blood from the gills to the rest of the body. In a single-pass circulatory system blood passes once through the heart to supply the body once. GOC:bf GOC:dgh UBERON:0005805 Wikipedia:Aorta ZFA:0000014 The process in which a relatively unspecialized cell acquires specialized features of a skeletal muscle cell, a somatic cell located in skeletal muscle. bf 2011-06-24T02:36:19Z biological_process GO:0035914 skeletal muscle cell differentiation GO:0035914 The process in which a relatively unspecialized cell acquires specialized features of a skeletal muscle cell, a somatic cell located in skeletal muscle. CL:0000188 GOC:BHF GOC:vk The regulated release of any steroid that acts as a hormone into the circulatory system. bf 2011-07-20T01:01:00Z biological_process GO:0035929 steroid hormone secretion GO:0035929 The regulated release of any steroid that acts as a hormone into the circulatory system. GOC:sl The regulated release of an androgen into the circulatory system. Androgens are steroid hormones that stimulate or control the development and maintenance of masculine characteristics in vertebrates. bf 2011-07-20T01:11:31Z biological_process GO:0035935 androgen secretion GO:0035935 The regulated release of an androgen into the circulatory system. Androgens are steroid hormones that stimulate or control the development and maintenance of masculine characteristics in vertebrates. GOC:sl The process in which a relatively unspecialized cell acquires specialized features of a tongue muscle cell. bf 2011-08-22T01:35:16Z biological_process GO:0035981 tongue muscle cell differentiation GO:0035981 The process in which a relatively unspecialized cell acquires specialized features of a tongue muscle cell. CL:0002673 GOC:yaf PMID:3393851 The process in which a relatively unspecialized cell acquires the specialized features of an endoderm cell, a cell of the inner of the three germ layers of the embryo. bf 2011-08-25T04:50:36Z endoderm cell differentiation biological_process GO:0035987 endodermal cell differentiation GO:0035987 The process in which a relatively unspecialized cell acquires the specialized features of an endoderm cell, a cell of the inner of the three germ layers of the embryo. CL:0000223 GOC:yaf PMID:17624332 endoderm cell differentiation CL:0000223 The process whose specific outcome is the progression of a tendon over time, from its formation to the mature structure. A tendon is a fibrous, strong, connective tissue that connects muscle to bone or integument and is capable of withstanding tension. Tendons and muscles work together to exert a pulling force. bf 2011-08-26T04:14:30Z biological_process sinew development GO:0035989 tendon development GO:0035989 The process whose specific outcome is the progression of a tendon over time, from its formation to the mature structure. A tendon is a fibrous, strong, connective tissue that connects muscle to bone or integument and is capable of withstanding tension. Tendons and muscles work together to exert a pulling force. GOC:yaf PMID:21412429 UBERON:0000043 sinew development UBERON:0000043 The process that gives rise to a tendon. This process pertains to the initial formation of a tendon from unspecified parts. bf 2011-08-30T01:35:10Z biological_process GO:0035992 tendon formation GO:0035992 The process that gives rise to a tendon. This process pertains to the initial formation of a tendon from unspecified parts. GOC:yaf PMID:17567668 UBERON:0000043 A membrane-tethered, short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum) that is similar in structure to a centriole and derives from it. The cilium basal body is the site of assembly and remodeling of the cilium and serves as a nucleation site for axoneme growth. As well as anchoring the cilium, it is thought to provide a selective gateway regulating the entry of ciliary proteins and vesicles by intraflagellar transport. bf 2011-12-15T10:40:20Z GO:0005932 basal body NIF_Subcellular:sao11978067 cilial basal body cilium basal body kinetosome microtubule basal body cellular_component GO:0036064 In most eukaryotic cells, 'ciliary basal body' (GO:0036064) and 'centriole' (GO:0005814) represent a common entity that cycles through its function in cell division, then ciliogenesis, then cell division again. However, these structures are modified extensively as they transition into each other, and may contain different proteins, specific to each component. ciliary basal body GO:0036064 A membrane-tethered, short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum) that is similar in structure to a centriole and derives from it. The cilium basal body is the site of assembly and remodeling of the cilium and serves as a nucleation site for axoneme growth. As well as anchoring the cilium, it is thought to provide a selective gateway regulating the entry of ciliary proteins and vesicles by intraflagellar transport. GOC:cilia GOC:clt PMID:21750193 cilium basal body GOC:bf kinetosome PMID:11125699 The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance, that does not require the replacement of preexisting tissues. bf 2011-12-19T01:47:22Z biological_process GO:0036072 direct ossification GO:0036072 The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance, that does not require the replacement of preexisting tissues. GO_REF:0000034 The multiplication or reproduction of germ cells, reproductive cells in multicellular organisms, resulting in the expansion of a cell population. bf 2012-01-17T04:06:27Z biological_process GO:0036093 germ cell proliferation GO:0036093 The multiplication or reproduction of germ cells, reproductive cells in multicellular organisms, resulting in the expansion of a cell population. CL:0000586 GOC:kmv The orderly movement of a Schwann cell from one site to another. A Schwann cell is a glial cell that ensheathes axons of neuron in the peripheral nervous system and is necessary for their maintenance and function. bf 2012-03-06T10:44:39Z biological_process GO:0036135 Schwann cell migration GO:0036135 The orderly movement of a Schwann cell from one site to another. A Schwann cell is a glial cell that ensheathes axons of neuron in the peripheral nervous system and is necessary for their maintenance and function. CL:0002573 PMID:20335460 A prolongation or process extending from a muscle cell. A muscle cell is a mature contractile cell, commonly known as a myocyte. This cell has as part of its cytoplasm myofibrils organized in various patterns. bf 2012-04-20T10:20:47Z myocyte projection muscle arm myopodia cellular_component GO:0036194 muscle cell projection GO:0036194 A prolongation or process extending from a muscle cell. A muscle cell is a mature contractile cell, commonly known as a myocyte. This cell has as part of its cytoplasm myofibrils organized in various patterns. CL:0000187 GOC:kmv PMID:15930100 PMID:22464329 myocyte projection CL:0000187 muscle arm GOC:kmv myopodia GOC:kmv The portion of the plasma membrane surrounding a muscle cell projection. bf 2012-04-20T10:21:51Z cellular_component GO:0036195 muscle cell projection membrane GO:0036195 The portion of the plasma membrane surrounding a muscle cell projection. CL:0000187 GOC:kmv PMID:15930100 PMID:22464329 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting a decline in the level of oxygen. bf 2012-07-20T01:05:46Z response to lowered oxygen levels biological_process GO:0036293 This term should be used when a decrease in oxygen levels is not considered a stress response. For a hypoxic stress response, consider instead 'response to hypoxia ; GO:0001666'. response to decreased oxygen levels GO:0036293 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting a decline in the level of oxygen. GOC:al response to lowered oxygen levels GOC:bf Any biological process involved in the maintenance of the steady-state number of epidermal stem cells within a population of cells. bf 2012-09-05T10:21:23Z biological_process GO:0036334 epidermal stem cell homeostasis GO:0036334 Any biological process involved in the maintenance of the steady-state number of epidermal stem cells within a population of cells. CL:1000428 GOC:nhn PMID:17666529 The region of a neuron that includes the cell body (cell soma) and dendrite(s), but excludes the axon. bf 2014-07-24T10:06:19Z cellular_component GO:0036477 somatodendritic compartment GO:0036477 The region of a neuron that includes the cell body (cell soma) and dendrite(s), but excludes the axon. GOC:PARL GOC:pad The characteristic movement of trunk neural crest cells from the neural tube to other locations in the vertebrate embryo. bf 2014-08-26T15:27:44Z trunk NCC migration biological_process GO:0036484 trunk neural crest cell migration GO:0036484 The characteristic movement of trunk neural crest cells from the neural tube to other locations in the vertebrate embryo. GOC:PARL GOC:bf GOC:mat PMID:2387238 trunk NCC migration PMID:2387238 The joining of two lipid bilayers that surround the Golgi apparatus to form a single Golgi membrane. bf 2015-05-21T10:05:06Z Golgi apparatus membrane fusion membrane fusion involved in Golgi reassembly post-mitotic fusion of Golgi membranes biological_process GO:0036504 Golgi membrane fusion GO:0036504 The joining of two lipid bilayers that surround the Golgi apparatus to form a single Golgi membrane. GOC:PARL GOC:bf PMID:12473691 membrane fusion involved in Golgi reassembly GOC:bf post-mitotic fusion of Golgi membranes PMID:10811609 The increase in size or mass of an entire organism, a part of an organism or a cell. GO:0048590 biological_process growth pattern non-developmental growth GO:0040007 See also the biological process term 'cell growth ; GO:0016049'. growth GO:0040007 The increase in size or mass of an entire organism, a part of an organism or a cell. GOC:bf GOC:ma non-developmental growth GOC:mah Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development. biological_process GO:0040008 regulation of growth GO:0040008 Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development. GOC:ems GOC:mah Self-propelled movement of a cell or organism from one location to another. biological_process GO:0040011 locomotion GO:0040011 Self-propelled movement of a cell or organism from one location to another. GOC:dgh Any process that modulates the frequency, rate or extent of locomotion of a cell or organism. biological_process GO:0040012 regulation of locomotion GO:0040012 Any process that modulates the frequency, rate or extent of locomotion of a cell or organism. GOC:ems Any process that stops, prevents, or reduces the frequency, rate or extent of locomotion of a cell or organism. down regulation of locomotion down-regulation of locomotion downregulation of locomotion inhibition of locomotion biological_process GO:0040013 negative regulation of locomotion GO:0040013 Any process that stops, prevents, or reduces the frequency, rate or extent of locomotion of a cell or organism. GOC:go_curators Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size. regulation of body growth regulation of body size biological_process GO:0040014 regulation of multicellular organism growth GO:0040014 Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size. GOC:dph GOC:ems GOC:tb regulation of body growth GOC:dph GOC:tb regulation of body size GOC:dph GOC:tb Any process that stops, prevents, or reduces the frequency, rate or extent of growth of an organism to reach its usual body size. negative regulation of body growth negative regulation of body size biological_process GO:0040015 negative regulation of multicellular organism growth GO:0040015 Any process that stops, prevents, or reduces the frequency, rate or extent of growth of an organism to reach its usual body size. GOC:dph GOC:ems GOC:tb negative regulation of body growth GOC:dph GOC:tb negative regulation of body size GOC:dph GOC:tb The first few specialized divisions of an activated animal egg. biological_process GO:0040016 embryonic cleavage GO:0040016 The first few specialized divisions of an activated animal egg. GOC:clt ISBN:0070524300 Any process that activates or increases the frequency, rate or extent of locomotion of a cell or organism. up regulation of locomotion up-regulation of locomotion upregulation of locomotion activation of locomotion stimulation of locomotion biological_process GO:0040017 positive regulation of locomotion GO:0040017 Any process that activates or increases the frequency, rate or extent of locomotion of a cell or organism. GOC:go_curators Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size. positive regulation of body growth positive regulation of body size biological_process GO:0040018 positive regulation of multicellular organism growth GO:0040018 Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size. GOC:dph GOC:go_curators GOC:tb positive regulation of body growth GOC:dph GOC:tb positive regulation of body size GOC:dph GOC:tb Any process that activates or increases the frequency, rate or extent of embryonic development. up regulation of embryonic development up-regulation of embryonic development upregulation of embryonic development activation of embryonic development stimulation of embryonic development biological_process GO:0040019 positive regulation of embryonic development GO:0040019 Any process that activates or increases the frequency, rate or extent of embryonic development. GOC:go_curators Any process that modulates the frequency, rate or extent of meiotic nuclear division, the process in which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes. regulation of meiosis biological_process GO:0040020 regulation of meiotic nuclear division GO:0040020 Any process that modulates the frequency, rate or extent of meiotic nuclear division, the process in which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes. GOC:ems GOC:ma regulation of meiosis GOC:vw Any process that modulates the consistent predetermined time point at which an integrated living unit or organism progresses from an initial condition to a later condition and the rate at which this time point is reached. heterochronic regulation of development temporal regulation of development biological_process developmental timing GO:0040034 regulation of development, heterochronic GO:0040034 Any process that modulates the consistent predetermined time point at which an integrated living unit or organism progresses from an initial condition to a later condition and the rate at which this time point is reached. PMID:9442909 The process that results in the generation of glial cells. This includes the production of glial progenitors and their differentiation into mature glia. biological_process GO:0042063 gliogenesis GO:0042063 The process that results in the generation of glial cells. This includes the production of glial progenitors and their differentiation into mature glia. GOC:dgh GOC:jid Growth of glial cells, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system. biological_process GO:0042065 glial cell growth GO:0042065 Growth of glial cells, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system. GOC:dph GOC:isa_complete GOC:jid Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving catecholamines. regulation of catecholamine metabolism biological_process GO:0042069 regulation of catecholamine metabolic process GO:0042069 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving catecholamines. GOC:go_curators The bidirectional movement of large protein complexes along microtubules within a cilium, mediated by motor proteins. GO:0035734 Wikipedia:Intraflagellar_transport intraflagellar transport intraflagellar transport involved in cilium organization intraflagellar transport involved in microtubule-based flagellum organisation biological_process IFT GO:0042073 Note that we deem cilium and microtubule-based flagellum to be equivalent. intraciliary transport GO:0042073 The bidirectional movement of large protein complexes along microtubules within a cilium, mediated by motor proteins. GOC:cilia GOC:kmv PMID:17981739 PMID:18180368 PMID:22869374 The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression). biological_process GO:0042074 cell migration involved in gastrulation GO:0042074 The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression). GOC:jl PMID:16099638 The self-renewing division of a germline stem cell to produce a daughter stem cell and a daughter germ cell, which will divide to form the gametes. GO:0048131 germ-line stem cell renewal biological_process GO:0042078 germ-line stem cell division GO:0042078 The self-renewing division of a germline stem cell to produce a daughter stem cell and a daughter germ cell, which will divide to form the gametes. GOC:jid PMID:2279698 The change in morphology and behavior of an endothelial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor. biological_process GO:0042118 endothelial cell activation GO:0042118 The change in morphology and behavior of an endothelial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor. GOC:mgi_curators ISBN:0781735149 PMID:12851652 PMID:14581484 Any process that modulates the frequency, rate or extent of cell proliferation. biological_process regulation of cell proliferation GO:0042127 regulation of cell population proliferation GO:0042127 Any process that modulates the frequency, rate or extent of cell proliferation. GOC:jl The continuous network of membranes encompassing the nuclear outer membrane and the endoplasmic reticulum membrane. nuclear membrane-ER network nuclear membrane-endoplasmic reticulum continuum cellular_component NE-ER continuum NE-ER network nuclear envelope-ER network nuclear envelope-endoplasmic reticulum continuum nuclear envelope-endoplasmic reticulum network GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network GO:0042175 The continuous network of membranes encompassing the nuclear outer membrane and the endoplasmic reticulum membrane. GOC:bf GOC:jl GOC:mah GOC:mcc GOC:pr GOC:vw nuclear membrane-ER network GOC:mah nuclear membrane-endoplasmic reticulum continuum GOC:mah nuclear envelope-endoplasmic reticulum network GOC:mah Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemical stimulus. response to chemical stimulus response to chemical substance biological_process GO:0042221 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. response to chemical GO:0042221 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemical stimulus. GOC:jl response to chemical stimulus GOC:dos A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis. GO:0007046 ribosome biogenesis and assembly biological_process GO:0042254 ribosome biogenesis GO:0042254 A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis. GOC:ma PMID:26404467 Wikipedia:Ribosome_biogenesis The aggregation, arrangement and bonding together of the mature ribosome and of its subunits. GO:0042257 ribosomal subunit assembly biological_process GO:0042255 ribosome assembly GO:0042255 The aggregation, arrangement and bonding together of the mature ribosome and of its subunits. GOC:ma PMID:30467428 ribosomal subunit assembly GOC:mah GOC:vw Any process that modulates the frequency, rate or extent of movement of proteins from the cytoplasm to the nucleus. regulation of protein import into cell nucleus regulation of protein transport from cytoplasm to nucleus regulation of protein-nucleus import biological_process GO:0042306 regulation of protein import into nucleus GO:0042306 Any process that modulates the frequency, rate or extent of movement of proteins from the cytoplasm to the nucleus. GOC:jl Any process that activates or increases the frequency, rate or extent of movement of proteins from the cytoplasm into the nucleus. positive regulation of protein import into cell nucleus positive regulation of protein transport from cytoplasm to nucleus positive regulation of protein-nucleus import up regulation of protein import into nucleus up-regulation of protein import into nucleus upregulation of protein import into nucleus activation of protein import into nucleus stimulation of protein import into nucleus biological_process GO:0042307 positive regulation of protein import into nucleus GO:0042307 Any process that activates or increases the frequency, rate or extent of movement of proteins from the cytoplasm into the nucleus. GOC:jl Any process that stops, prevents, or reduces the frequency, rate or extent of the movement of proteins from the cytoplasm into the nucleus. down regulation of protein import into nucleus down-regulation of protein import into nucleus downregulation of protein import into nucleus negative regulation of protein import into cell nucleus negative regulation of protein transport from cytoplasm to nucleus negative regulation of protein-nucleus import inhibition of protein import into nucleus biological_process GO:0042308 negative regulation of protein import into nucleus GO:0042308 Any process that stops, prevents, or reduces the frequency, rate or extent of the movement of proteins from the cytoplasm into the nucleus. GOC:jl Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane. biological_process GO:0042391 regulation of membrane potential GO:0042391 Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane. GOC:jl GOC:mtg_cardio GOC:tb ISBN:0198506732 The chemical reactions and pathways occurring at the level of individual cells resulting in the formation of any of a group of naturally occurring, biologically active amines, such as norepinephrine, histamine, and serotonin, many of which act as neurotransmitters. biogenic amine anabolism biogenic amine biosynthesis biogenic amine formation biogenic amine synthesis cellular biogenic amine biosynthetic process biological_process GO:0042401 biogenic amine biosynthetic process GO:0042401 The chemical reactions and pathways occurring at the level of individual cells resulting in the formation of any of a group of naturally occurring, biologically active amines, such as norepinephrine, histamine, and serotonin, many of which act as neurotransmitters. GOC:jl ISBN:0395825172 The chemical reactions and pathways involving norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine. levarterenol metabolic process levarterenol metabolism noradrenaline metabolic process noradrenaline metabolism norepinephrine metabolism biological_process GO:0042415 norepinephrine metabolic process GO:0042415 The chemical reactions and pathways involving norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine. GOC:jl ISBN:0198506732 The chemical reactions and pathways resulting in the formation of norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine. levarterenol biosynthesis levarterenol biosynthetic process noradrenaline biosynthesis noradrenaline biosynthetic process norepinephrine anabolism norepinephrine biosynthesis norepinephrine formation norepinephrine synthesis biological_process GO:0042421 norepinephrine biosynthetic process GO:0042421 The chemical reactions and pathways resulting in the formation of norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine. GOC:jl ISBN:0198506732 The chemical reactions and pathways resulting in the formation of any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine. Reactome:R-HSA-209905 Wikipedia:Catecholamines catecholamine anabolism catecholamine biosynthesis catecholamine formation catecholamine synthesis biological_process GO:0042423 catecholamine biosynthetic process GO:0042423 The chemical reactions and pathways resulting in the formation of any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine. GOC:jl ISBN:0198506732 Reactome:R-HSA-209905 Catecholamine biosynthesis The chemical reactions and pathways resulting in the formation of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties. Wikipedia:Serotonin serotonin anabolism serotonin biosynthesis serotonin formation serotonin synthesis biological_process GO:0042427 serotonin biosynthetic process GO:0042427 The chemical reactions and pathways resulting in the formation of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties. GOC:jl ISBN:0198506732 The chemical reactions and pathways involving serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties. serotonin metabolism biological_process GO:0042428 serotonin metabolic process GO:0042428 The chemical reactions and pathways involving serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties. GOC:jl ISBN:0198506732 The chemical reactions and pathways involving compounds that contain an indole (2,3-benzopyrrole) skeleton. GO:0042434 indole and derivative metabolic process indole and derivative metabolism indole-containing compound metabolism ketole metabolic process ketole metabolism indole derivative metabolic process indole derivative metabolism biological_process GO:0042430 indole-containing compound metabolic process GO:0042430 The chemical reactions and pathways involving compounds that contain an indole (2,3-benzopyrrole) skeleton. GOC:jl GOC:mah The chemical reactions and pathways resulting in the formation of compounds that contain an indole (2,3-benzopyrrole) skeleton. indole derivative biosynthesis indole derivative biosynthetic process indole-containing compound anabolism indole-containing compound biosynthesis indole-containing compound formation indole-containing compound synthesis biological_process GO:0042435 indole-containing compound biosynthetic process GO:0042435 The chemical reactions and pathways resulting in the formation of compounds that contain an indole (2,3-benzopyrrole) skeleton. GOC:jl Development of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light. GO:0046531 photoreceptor morphogenesis biological_process GO:0042461 photoreceptor cell development GO:0042461 Development of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light. GOC:go_curators Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve. biological_process GO:0042462 eye photoreceptor cell development GO:0042462 Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve. GOC:jl ISBN:0192800981 Any process that modulates the frequency, rate or extent of eye photoreceptor development. regulation of eye photoreceptor development biological_process GO:0042478 regulation of eye photoreceptor cell development GO:0042478 Any process that modulates the frequency, rate or extent of eye photoreceptor development. GOC:jl Any process that activates or increases the frequency, rate or extent of eye photoreceptor development. positive regulation of eye photoreceptor development up regulation of eye photoreceptor cell development up-regulation of eye photoreceptor cell development upregulation of eye photoreceptor cell development activation of eye photoreceptor cell development stimulation of eye photoreceptor cell development biological_process GO:0042479 positive regulation of eye photoreceptor cell development GO:0042479 Any process that activates or increases the frequency, rate or extent of eye photoreceptor development. GOC:jl Any process that stops, prevents, or reduces the frequency, rate or extent of eye photoreceptor development. down regulation of eye photoreceptor cell development down-regulation of eye photoreceptor cell development downregulation of eye photoreceptor cell development negative regulation of eye photoreceptor development inhibition of eye photoreceptor cell development biological_process GO:0042480 negative regulation of eye photoreceptor cell development GO:0042480 Any process that stops, prevents, or reduces the frequency, rate or extent of eye photoreceptor development. GOC:jl A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state. biological_process GO:0042551 neuron maturation GO:0042551 A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state. GOC:dph GOC:jl The process in which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier. Wikipedia:Myelin biological_process myelinogenesis GO:0042552 myelination GO:0042552 The process in which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier. GOC:dgh GOC:mah myelinogenesis GOC:cjm HP:0003429 Any biological process involved in the maintenance of an internal steady state. GO:0032844 GO:0032845 GO:0032846 homeostasis activation of homeostatic process inhibition of homeostatic process biological_process negative regulation of homeostatic process positive regulation of homeostatic process regulation of homeostatic process GO:0042592 homeostatic process GO:0042592 Any biological process involved in the maintenance of an internal steady state. GOC:jl ISBN:0395825172 Any complex of actin, myosin, and accessory proteins. actomyosin complex actomyosin structure cellular_component GO:0042641 actomyosin GO:0042641 Any complex of actin, myosin, and accessory proteins. GOC:go_curators The process in which a relatively unspecialized cell acquires the specialized features of a retinal cone cell. biological_process GO:0042670 retinal cone cell differentiation GO:0042670 The process in which a relatively unspecialized cell acquires the specialized features of a retinal cone cell. GOC:go_curators The process in which a relatively unspecialized cell acquires specialized features of a muscle cell. biological_process myogenesis GO:0042692 muscle cell differentiation GO:0042692 The process in which a relatively unspecialized cell acquires specialized features of a muscle cell. CL:0000187 GOC:go_curators Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving sulfur, the nonmetallic element sulfur or compounds that contain sulfur. regulation of sulfur metabolism regulation of sulphur metabolic process regulation of sulphur metabolism biological_process GO:0042762 regulation of sulfur metabolic process GO:0042762 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving sulfur, the nonmetallic element sulfur or compounds that contain sulfur. GOC:go_curators The directed movement of an amide, any compound containing one, two, or three acyl groups attached to a nitrogen atom, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process GO:0042886 amide transport GO:0042886 The directed movement of an amide, any compound containing one, two, or three acyl groups attached to a nitrogen atom, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:jl ISBN:0198506732 Any process that modulates the occurrence or rate of cell death by apoptotic process. Reactome:R-HSA-169911 Reactome:R-HSA-5633008 regulation of apoptosis biological_process apoptosis regulator activity GO:0042981 This term should only be used when it is not possible to determine which phase or subtype of the apoptotic process is regulated by a gene product. Whenever detailed information is available, the more granular children terms should be used. regulation of apoptotic process GO:0042981 Any process that modulates the occurrence or rate of cell death by apoptotic process. GOC:jl GOC:mtg_apoptosis Reactome:R-HSA-169911 Regulation of Apoptosis Reactome:R-HSA-5633008 TP53 Regulates Transcription of Cell Death Genes A prolongation or process extending from a cell, e.g. a flagellum or axon. cell process cellular process cellular projection cellular_component GO:0042995 cell projection GO:0042995 A prolongation or process extending from a cell, e.g. a flagellum or axon. GOC:jl PMID:16318917 Any process that modulates the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane. biological_process GO:0042996 regulation of Golgi to plasma membrane protein transport GO:0042996 Any process that modulates the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane. GOC:jl Any process that stops, prevents, or reduces the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane. down regulation of Golgi to plasma membrane protein transport down-regulation of Golgi to plasma membrane protein transport downregulation of Golgi to plasma membrane protein transport inhibition of Golgi to plasma membrane protein transport biological_process GO:0042997 negative regulation of Golgi to plasma membrane protein transport GO:0042997 Any process that stops, prevents, or reduces the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane. GOC:jl Any process that activates or increases the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane. up regulation of Golgi to plasma membrane protein transport up-regulation of Golgi to plasma membrane protein transport upregulation of Golgi to plasma membrane protein transport activation of Golgi to plasma membrane protein transport stimulation of Golgi to plasma membrane protein transport biological_process GO:0042998 positive regulation of Golgi to plasma membrane protein transport GO:0042998 Any process that activates or increases the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane. GOC:jl The directed movement of proteins from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane. biological_process GO:0043001 Golgi to plasma membrane protein transport GO:0043001 The directed movement of proteins from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane. ISBN:0716731363 A prolongation or process extending from a nerve cell, e.g. an axon or dendrite. NIF_Subcellular:sao867568886 neuron process neuron protrusion neuronal cell projection neurite cellular_component nerve fiber GO:0043005 neuron projection GO:0043005 A prolongation or process extending from a nerve cell, e.g. an axon or dendrite. GOC:jl PMID:3077060 neuron protrusion NIF_Subcellular:sao250931889 nerve fiber GOC:dph The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching. biological_process GO:0043009 chordate embryonic development GO:0043009 The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching. GOC:mtg_sensu The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field. GO:0001747 GO:0031075 biological_process GO:0043010 camera-type eye development GO:0043010 The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field. GOC:go_curators GOC:mtg_sensu The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites. NIF_Subcellular:sao1044911821 Wikipedia:Soma_(biology) neuron cell body neuronal cell soma cellular_component GO:0043025 Note that 'cell body' and 'cell soma' are not used in the literature for cells that lack projections, nor for some cells (e.g. yeast with mating projections) that do have projections. neuronal cell body GO:0043025 The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites. GOC:go_curators The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide. Reactome:R-HSA-9037628 peptide anabolism peptide biosynthesis peptide formation peptide synthesis biological_process GO:0043043 peptide biosynthetic process GO:0043043 The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide. GOC:dph GOC:jl Reactome:R-HSA-9037628 Rhesus blood group biosynthesis A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures in the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane, and also covers the host cell environment outside an intracellular parasite. extracellular structure organisation extracellular structure organization and biogenesis biological_process GO:0043062 extracellular structure organization GO:0043062 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures in the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane, and also covers the host cell environment outside an intracellular parasite. GOC:ai GOC:dph GOC:jl GOC:mah extracellular structure organization and biogenesis GOC:dph GOC:jl GOC:mah Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process. Reactome:R-HSA-193648 Reactome:R-HSA-205043 up regulation of apoptosis up-regulation of apoptosis upregulation of apoptosis activation of apoptosis positive regulation of apoptosis stimulation of apoptosis biological_process pro-apoptosis GO:0043065 This term should only be used when it is not possible to determine which phase or subtype of the apoptotic process is positively regulated by a gene product. Whenever detailed information is available, the more granular children terms should be used. positive regulation of apoptotic process GO:0043065 Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process. GOC:jl GOC:mtg_apoptosis Reactome:R-HSA-193648 NRAGE signals death through JNK Reactome:R-HSA-205043 NRIF signals cell death from the nucleus Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process. GO:0006916 Reactome:R-HSA-193639 Reactome:R-HSA-211728 Reactome:R-HSA-211733 anti-apoptosis down regulation of apoptosis down-regulation of apoptosis downregulation of apoptosis inhibition of apoptosis negative regulation of apoptosis biological_process apoptosis inhibitor activity pro-survival GO:0043066 This term should only be used when it is not possible to determine which phase or subtype of the apoptotic process is negatively regulated by a gene product. Whenever detailed information is available, the more granular children terms should be used. negative regulation of apoptotic process GO:0043066 Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process. GOC:jl GOC:mtg_apoptosis Reactome:R-HSA-193639 p75NTR signals via NF-kB Reactome:R-HSA-211728 Regulation of PAK-2p34 activity by PS-GAP/RHG10 Reactome:R-HSA-211733 Regulation of activated PAK-2p34 by proteasome mediated degradation Any process that modulates the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes. GO:0043070 regulation of non-apoptotic programmed cell death biological_process GO:0043067 regulation of programmed cell death GO:0043067 Any process that modulates the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes. GOC:jl Any process that activates or increases the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes. GO:0043071 up regulation of programmed cell death up-regulation of programmed cell death upregulation of programmed cell death activation of programmed cell death positive regulation of non-apoptotic programmed cell death stimulation of programmed cell death biological_process GO:0043068 positive regulation of programmed cell death GO:0043068 Any process that activates or increases the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes. GOC:jl Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes. GO:0043072 down regulation of programmed cell death down-regulation of programmed cell death downregulation of programmed cell death inhibition of programmed cell death negative regulation of non-apoptotic programmed cell death biological_process GO:0043069 negative regulation of programmed cell death GO:0043069 Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes. GOC:jl The nucleus of a germ cell, a reproductive cell in multicellular organisms. germ-cell nucleus cellular_component GO:0043073 germ cell nucleus GO:0043073 The nucleus of a germ cell, a reproductive cell in multicellular organisms. CL:0000586 GOC:go_curators The narrow gap that separates the presynaptic and postsynaptic membranes, into which neurotransmitter is released. NIF_Subcellular:sao243541954 cellular_component GO:0043083 synaptic cleft GO:0043083 The narrow gap that separates the presynaptic and postsynaptic membranes, into which neurotransmitter is released. GOC:jl PMID:30784960 Any process in which proteins and protein complexes involved in translation are transported to, or maintained in, a specific location. establishment and maintenance of translational machinery localization establishment and maintenance of translational protein localization regulation of translation by machinery localisation translational machinery localization translational protein localization biological_process GO:0043143 regulation of translation by machinery localization GO:0043143 Any process in which proteins and protein complexes involved in translation are transported to, or maintained in, a specific location. GOC:jl regulation of translation by machinery localisation GOC:mah translational machinery localization GOC:dph GOC:tb The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. GO:0034960 GO:0043283 GO:0044259 biopolymer metabolic process macromolecule metabolism organismal macromolecule metabolism multicellular organismal macromolecule metabolic process biological_process GO:0043170 macromolecule metabolic process GO:0043170 The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. GOC:mah biopolymer metabolic process GOC:mtg_chebi_dec09 A small, membranous protrusion from a dendrite that forms a postsynaptic compartment, typically receiving input from a single presynapse. They function as partially isolated biochemical and an electrical compartments. Spine morphology is variable:they can be thin, stubby, mushroom, or branched, with a continuum of intermediate morphologies. They typically terminate in a bulb shape, linked to the dendritic shaft by a restriction. Spine remodeling is though to be involved in synaptic plasticity. NIF_Subcellular:sao1799103720 Wikipedia:Dendritic_spine dendrite spine branched dendritic spine mushroom dendritic spine sessile dendritic spine stubby dendritic spine thin dendritic spine cellular_component GO:0043197 dendritic spine GO:0043197 A small, membranous protrusion from a dendrite that forms a postsynaptic compartment, typically receiving input from a single presynapse. They function as partially isolated biochemical and an electrical compartments. Spine morphology is variable:they can be thin, stubby, mushroom, or branched, with a continuum of intermediate morphologies. They typically terminate in a bulb shape, linked to the dendritic shaft by a restriction. Spine remodeling is though to be involved in synaptic plasticity. GOC:nln branched dendritic spine NIF_Subcellular:sao965204139 mushroom dendritic spine NIF_Subcellular:sao876577163 sessile dendritic spine NIF_Subcellular:sao1536532595 stubby dendritic spine NIF_Subcellular:sao317384566 thin dendritic spine NIF_Subcellular:sao1232858786 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups. GO:0010237 response to amino acid stimulus biological_process GO:0043200 response to amino acid GO:0043200 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups. GOC:ef GOC:mlg response to amino acid stimulus GOC:dos Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external biotic stimulus, an external stimulus caused by, or produced by living things. biological_process GO:0043207 response to external biotic stimulus GO:0043207 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external biotic stimulus, an external stimulus caused by, or produced by living things. GOC:go_curators An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system. FMA:62983 NIF_Subcellular:sao593830697 Wikipedia:Myelin Schwann cell myelin sheath astrocyte sheath oligodendrocyte myelin sheath cellular_component GO:0043209 myelin sheath GO:0043209 An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system. GOC:cjm GOC:jl NIF_Subcellular:sao593830697 Wikipedia:Myelin astrocyte sheath NIF_Subcellular:nlx_subcell_20090204 oligodendrocyte myelin sheath NIF_Subcellular:sao1279474730 Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane. NIF_Subcellular:sao1539965131 Wikipedia:Organelle cellular_component GO:0043226 organelle GO:0043226 Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane. GOC:go_curators Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. NIF_Subcellular:sao414196390 membrane-enclosed organelle cellular_component GO:0043227 membrane-bounded organelle GO:0043227 Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. GOC:go_curators Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes. NIF_Subcellular:sao1456184038 membrane-less organelle non-membrane-bounded organelle non-membrane-enclosed organelle cellular_component biological condensate GO:0043228 membraneless organelle GO:0043228 Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes. GOC:go_curators Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. cellular_component GO:0043229 intracellular organelle GO:0043229 Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. GOC:go_curators Organized structure of distinctive morphology and function, occurring outside the cell. Includes, for example, extracellular membrane vesicles (EMVs) and the cellulosomes of anaerobic bacteria and fungi. cellular_component GO:0043230 extracellular organelle GO:0043230 Organized structure of distinctive morphology and function, occurring outside the cell. Includes, for example, extracellular membrane vesicles (EMVs) and the cellulosomes of anaerobic bacteria and fungi. GOC:jl PMID:9914479 Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. intracellular membrane-enclosed organelle cellular_component GO:0043231 intracellular membrane-bounded organelle GO:0043231 Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. GOC:go_curators Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes. intracellular non-membrane-bounded organelle intracellular non-membrane-enclosed organelle cellular_component GO:0043232 intracellular membraneless organelle GO:0043232 Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes. GOC:go_curators The internal volume enclosed by the membranes of a particular organelle; includes the volume enclosed by a single organelle membrane, e.g. endoplasmic reticulum lumen, or the volume enclosed by the innermost of the two lipid bilayers of an organelle envelope, e.g. nuclear lumen. cellular_component GO:0043233 organelle lumen GO:0043233 The internal volume enclosed by the membranes of a particular organelle; includes the volume enclosed by a single organelle membrane, e.g. endoplasmic reticulum lumen, or the volume enclosed by the innermost of the two lipid bilayers of an organelle envelope, e.g. nuclear lumen. GOC:jl GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of protein complex disassembly, the disaggregation of a protein complex into its constituent components. down regulation of protein complex disassembly down-regulation of protein complex disassembly downregulation of protein complex disassembly inhibition of protein complex disassembly biological_process negative regulation of protein complex disassembly GO:0043242 negative regulation of protein-containing complex disassembly GO:0043242 Any process that stops, prevents, or reduces the frequency, rate or extent of protein complex disassembly, the disaggregation of a protein complex into its constituent components. GOC:jl Any process that activates or increases the frequency, rate or extent of protein complex disassembly, the disaggregation of a protein complex into its constituent components. up regulation of protein complex disassembly up-regulation of protein complex disassembly upregulation of protein complex disassembly activation of protein complex disassembly stimulation of protein complex disassembly biological_process positive regulation of protein complex disassembly GO:0043243 positive regulation of protein-containing complex disassembly GO:0043243 Any process that activates or increases the frequency, rate or extent of protein complex disassembly, the disaggregation of a protein complex into its constituent components. GOC:jl Any process that modulates the frequency, rate or extent of protein complex disassembly, the disaggregation of a protein complex into its constituent components. biological_process regulation of protein complex disassembly GO:0043244 regulation of protein-containing complex disassembly GO:0043244 Any process that modulates the frequency, rate or extent of protein complex disassembly, the disaggregation of a protein complex into its constituent components. GOC:jl A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state. RBC maturation red blood cell maturation biological_process GO:0043249 erythrocyte maturation GO:0043249 A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state. GOC:devbiol GOC:jl RBC maturation CL:0000232 red blood cell maturation CL:0000232 Any process that modulates the frequency, rate or extent of protein complex assembly. biological_process regulation of protein complex assembly GO:0043254 regulation of protein-containing complex assembly GO:0043254 Any process that modulates the frequency, rate or extent of protein complex assembly. GOC:jl Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of carbohydrates. regulation of carbohydrate anabolism regulation of carbohydrate biosynthesis regulation of carbohydrate formation regulation of carbohydrate synthesis biological_process GO:0043255 regulation of carbohydrate biosynthetic process GO:0043255 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of carbohydrates. GOC:jl Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring outside the cell. extracellular non-membrane-bounded organelle extracellular non-membrane-enclosed organelle cellular_component GO:0043264 extracellular membraneless organelle GO:0043264 Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring outside the cell. GOC:jl Any process that modulates the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. regulation of ion transport biological_process GO:0043269 regulation of monoatomic ion transport GO:0043269 Any process that modulates the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:jl Any process that activates or increases the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. up regulation of ion transport up-regulation of ion transport upregulation of ion transport activation of ion transport stimulation of ion transport biological_process GO:0043270 positive regulation of monoatomic ion transport GO:0043270 Any process that activates or increases the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:jl Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. negative regulation of ion transport down regulation of ion transport down-regulation of ion transport downregulation of ion transport inhibition of ion transport biological_process GO:0043271 negative regulation of monoatomic ion transport GO:0043271 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:jl Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkaloid stimulus. Alkaloids are a large group of nitrogenous substances found in naturally in plants, many of which have extracts that are pharmacologically active. biological_process GO:0043279 response to alkaloid GO:0043279 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkaloid stimulus. Alkaloids are a large group of nitrogenous substances found in naturally in plants, many of which have extracts that are pharmacologically active. GOC:jl Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle. contractile fibre cellular_component GO:0043292 contractile muscle fiber GO:0043292 Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle. GOC:go_curators ISBN:0815316194 The process in which a myeloid precursor cell acquires specialized features of an erythrocyte without a nucleus. An example of this process is found in Mus musculus. enucleate RBC differentiation enucleate red blood cell differentiation biological_process GO:0043353 enucleate erythrocyte differentiation GO:0043353 The process in which a myeloid precursor cell acquires specialized features of an erythrocyte without a nucleus. An example of this process is found in Mus musculus. GOC:go_curators enucleate RBC differentiation CL:0000232 enucleate red blood cell differentiation CL:0000232 A developmental process, independent of morphogenetic (shape) change, that is required for an enucleate erythrocyte to attain its fully functional state. An enucleate erythrocyte is an erythrocyte without a nucleus. enucleate RBC maturation enucleate red blood cell maturation biological_process GO:0043354 enucleate erythrocyte maturation GO:0043354 A developmental process, independent of morphogenetic (shape) change, that is required for an enucleate erythrocyte to attain its fully functional state. An enucleate erythrocyte is an erythrocyte without a nucleus. GOC:go_curators enucleate RBC maturation CL:0000232 enucleate red blood cell maturation CL:0000232 A developmental process, independent of morphogenetic (shape) change, that is required for a nucleate erythrocyte to attain its fully functional state. A nucleate erythrocyte is an erythrocyte with a nucleus. nucleate RBC maturation nucleate red blood cell maturation biological_process GO:0043362 nucleate erythrocyte maturation GO:0043362 A developmental process, independent of morphogenetic (shape) change, that is required for a nucleate erythrocyte to attain its fully functional state. A nucleate erythrocyte is an erythrocyte with a nucleus. GOC:devbiol GOC:jl nucleate RBC maturation CL:0000232 nucleate red blood cell maturation CL:0000232 The process in which a myeloid precursor cell acquires specializes features of an erythrocyte with a nucleus, as found in non-mammalian vertebrates such as birds. nucleate RBC differentiation nucleate red blood cell differentiation biological_process GO:0043363 nucleate erythrocyte differentiation GO:0043363 The process in which a myeloid precursor cell acquires specializes features of an erythrocyte with a nucleus, as found in non-mammalian vertebrates such as birds. GOC:jl nucleate RBC differentiation CL:0000232 nucleate red blood cell differentiation CL:0000232 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals. response to peptide hormone stimulus response to polypeptide hormone stimulus biological_process GO:0043434 response to peptide hormone GO:0043434 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals. PMID:11027914 PMID:15134857 Wikipedia:Peptide_hormone response to peptide hormone stimulus GOC:dos The chemical reactions and pathways involving any oxoacid; an oxoacid is a compound which contains oxygen, at least one other element, and at least one hydrogen bound to oxygen, and which produces a conjugate base by loss of positive hydrogen ion(s) (hydrons). keto acid metabolic process keto acid metabolism ketoacid metabolic process ketoacid metabolism oxo acid metabolic process oxo acid metabolism oxoacid metabolism biological_process GO:0043436 oxoacid metabolic process GO:0043436 The chemical reactions and pathways involving any oxoacid; an oxoacid is a compound which contains oxygen, at least one other element, and at least one hydrogen bound to oxygen, and which produces a conjugate base by loss of positive hydrogen ion(s) (hydrons). Wikipedia:Oxyacid Any process that modulates the frequency, rate or extent of secondary metabolism, the chemical reactions and pathways involving compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon. regulation of secondary metabolism biological_process GO:0043455 regulation of secondary metabolic process GO:0043455 Any process that modulates the frequency, rate or extent of secondary metabolism, the chemical reactions and pathways involving compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon. GOC:jl The accumulation of pigment in an organism, tissue or cell, either by increased deposition or by increased number of cells. biological_process GO:0043473 pigmentation GO:0043473 The accumulation of pigment in an organism, tissue or cell, either by increased deposition or by increased number of cells. GOC:jl A process in which muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities. biological_process muscle plasticity GO:0043500 muscle adaptation GO:0043500 A process in which muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities. GOC:mtg_muscle PMID:11181628 PMID:11449884 PMID:12605307 Any process in which skeletal muscles change their phenotypic profiles in response to altered functional demands and a variety of signals. biological_process skeletal muscle plasticity GO:0043501 skeletal muscle adaptation GO:0043501 Any process in which skeletal muscles change their phenotypic profiles in response to altered functional demands and a variety of signals. GOC:mtg_muscle PMID:11181628 PMID:11449884 PMID:12605307 Any process that modulates the frequency, rate or extent of muscle adaptation. biological_process regulation of muscle plasticity GO:0043502 regulation of muscle adaptation GO:0043502 Any process that modulates the frequency, rate or extent of muscle adaptation. GOC:go_curators GOC:mtg_muscle Any process that modulates the occurrence or rate of cell death by apoptotic process in neurons. regulation of apoptosis of neuronal cells regulation of apoptosis of neurons regulation of neuron programmed cell death regulation of neuronal cell programmed cell death regulation of programmed cell death of neuronal cells regulation of programmed cell death, neurons regulation of neuron apoptosis biological_process GO:0043523 regulation of neuron apoptotic process GO:0043523 Any process that modulates the occurrence or rate of cell death by apoptotic process in neurons. GOC:go_curators GOC:mtg_apoptosis Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process in neurons. down regulation of neuron apoptosis down-regulation of neuron apoptosis downregulation of neuron apoptosis negative regulation of programmed cell death, neurons inhibition of neuron apoptosis negative regulation of neuron apoptosis neuron survival biological_process GO:0043524 negative regulation of neuron apoptotic process GO:0043524 Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process in neurons. GOC:go_curators GOC:mtg_apoptosis Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptotic process. positive regulation of programmed cell death, neurons up regulation of neuron apoptosis up-regulation of neuron apoptosis upregulation of neuron apoptosis activation of neuron apoptosis positive regulation of neuron apoptosis stimulation of neuron apoptosis biological_process GO:0043525 positive regulation of neuron apoptotic process GO:0043525 Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptotic process. GOC:go_curators GOC:mtg_apoptosis The orderly movement of an endothelial cell into the extracellular matrix in order to form new blood vessels during angiogenesis. biological_process GO:0043534 blood vessel endothelial cell migration GO:0043534 The orderly movement of an endothelial cell into the extracellular matrix in order to form new blood vessels during angiogenesis. PMID:11166264 Any process that modulates the frequency, rate or extent of the migration of the endothelial cells of blood vessels. biological_process GO:0043535 regulation of blood vessel endothelial cell migration GO:0043535 Any process that modulates the frequency, rate or extent of the migration of the endothelial cells of blood vessels. GOC:go_curators Any process that activates or increases the frequency, rate or extent of the migration of the endothelial cells of blood vessels. up regulation of blood vessel endothelial cell migration up-regulation of blood vessel endothelial cell migration upregulation of blood vessel endothelial cell migration activation of blood vessel endothelial cell migration stimulation of blood vessel endothelial cell migration biological_process GO:0043536 positive regulation of blood vessel endothelial cell migration GO:0043536 Any process that activates or increases the frequency, rate or extent of the migration of the endothelial cells of blood vessels. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of the migration of the endothelial cells of blood vessels. down regulation of blood vessel endothelial cell migration down-regulation of blood vessel endothelial cell migration downregulation of blood vessel endothelial cell migration inhibition of blood vessel endothelial cell migration biological_process GO:0043537 negative regulation of blood vessel endothelial cell migration GO:0043537 Any process that stops, prevents, or reduces the frequency, rate or extent of the migration of the endothelial cells of blood vessels. GOC:go_curators The orderly movement of an endothelial cell into the extracellular matrix to form an endothelium. biological_process GO:0043542 endothelial cell migration GO:0043542 The orderly movement of an endothelial cell into the extracellular matrix to form an endothelium. GOC:go_curators Any process that modulates the frequency, rate or extent of the process of gaseous exchange between an organism and its environment. biological_process GO:0043576 regulation of respiratory gaseous exchange GO:0043576 Any process that modulates the frequency, rate or extent of the process of gaseous exchange between an organism and its environment. GOC:jl The process whose specific outcome is the progression of the tongue over time, from its formation to the mature structure. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in many other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech. glossa development lingua development biological_process GO:0043586 tongue development GO:0043586 The process whose specific outcome is the progression of the tongue over time, from its formation to the mature structure. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in many other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech. GOC:jl UBERON:0001723 The process in which the anatomical structures of the tongue are generated and organized. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in man other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech. lingua morphogenesis glossa morphogenesis biological_process GO:0043587 tongue morphogenesis GO:0043587 The process in which the anatomical structures of the tongue are generated and organized. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in man other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech. GOC:jl UBERON:0001723 The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue. animal skin development biological_process GO:0043588 skin development GO:0043588 The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue. GOC:jl UBERON:0002097 The process in which the anatomical structures of the skin are generated and organized. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner, sensitive and vascular dermis (cutis, corium or true skin) composed mostly of connective tissue. biological_process GO:0043589 skin morphogenesis GO:0043589 The process in which the anatomical structures of the skin are generated and organized. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner, sensitive and vascular dermis (cutis, corium or true skin) composed mostly of connective tissue. GOC:jl UBERON:0002097 The chemical reactions and pathways involving an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group, as carried out by individual cells. amide metabolism cellular amide metabolic process biological_process GO:0043603 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. amide metabolic process GO:0043603 The chemical reactions and pathways involving an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group, as carried out by individual cells. GOC:curators The chemical reactions and pathways resulting in the formation of an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group. biological_process GO:0043604 amide biosynthetic process GO:0043604 The chemical reactions and pathways resulting in the formation of an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group. GOC:curators The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone, involved in the progression of the skeleton from its formation to its mature state. ossification involved in skeletal development ossification involved in bone modeling biological_process GO:0043931 ossification involved in bone maturation GO:0043931 The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone, involved in the progression of the skeleton from its formation to its mature state. GOC:dph GOC:mah GOC:mtg_mpo ossification involved in skeletal development GOC:dph ossification involved in bone modeling GO_REF:0000034 Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein complex. mah 2010-09-08T10:01:42Z GO:0034600 GO:0034621 GO:0071822 protein complex subunit organisation protein complex subunit organization biological_process cellular macromolecular complex organization cellular macromolecular complex subunit organisation cellular macromolecular complex subunit organization macromolecular complex organization macromolecular complex subunit organisation macromolecular complex subunit organization protein-containing complex subunit organization GO:0043933 protein-containing complex organization GO:0043933 Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein complex. GOC:mah protein complex subunit organisation GOC:mah Any process that modulates the frequency, rate or extent of a system process, a multicellular organismal process carried out by any of the organs or tissues in an organ system. biological_process GO:0044057 regulation of system process GO:0044057 Any process that modulates the frequency, rate or extent of a system process, a multicellular organismal process carried out by any of the organs or tissues in an organ system. GOC:jl Any process that modulates the frequency, rate or extent of a digestive system process, a physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. biological_process GO:0044058 regulation of digestive system process GO:0044058 Any process that modulates the frequency, rate or extent of a digestive system process, a physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. GOC:jl Any process that modulates the frequency, rate or extent of an endocrine process, a process involving the secretion of or response to endocrine hormones. An endocrine hormone is a hormone released into the circulatory system. regulation of endocrine system process biological_process GO:0044060 regulation of endocrine process GO:0044060 Any process that modulates the frequency, rate or extent of an endocrine process, a process involving the secretion of or response to endocrine hormones. An endocrine hormone is a hormone released into the circulatory system. GOC:jl Any process that modulates the frequency, rate or extent of a respiratory system process, an organ system process carried out by any of the organs or tissues of the respiratory system. biological_process GO:0044065 regulation of respiratory system process GO:0044065 Any process that modulates the frequency, rate or extent of a respiratory system process, an organ system process carried out by any of the organs or tissues of the respiratory system. GOC:jl A process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component. Includes biosynthesis of constituent macromolecules, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component. GO:0071843 cellular component biogenesis at cellular level biological_process GO:0044085 cellular component biogenesis GO:0044085 A process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component. Includes biosynthesis of constituent macromolecules, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component. GOC:jl GOC:mah Any process that modulates the frequency, rate or extent of cellular component biogenesis, a process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component. biological_process GO:0044087 regulation of cellular component biogenesis GO:0044087 Any process that modulates the frequency, rate or extent of cellular component biogenesis, a process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component. GOC:jl Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a vacuole. regulation of vacuole organisation biological_process regulation of vacuole biogenesis GO:0044088 regulation of vacuole organization GO:0044088 Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a vacuole. GOC:jl GOC:mah regulation of vacuole organisation GOC:mah regulation of vacuole biogenesis GOC:mah Any process that activates or increases the frequency, rate or extent of cellular component biogenesis, a process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component. biological_process GO:0044089 positive regulation of cellular component biogenesis GO:0044089 Any process that activates or increases the frequency, rate or extent of cellular component biogenesis, a process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component. GOC:jl Any process that activates or increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a vacuole. positive regulation of vacuole organisation biological_process positive regulation of vacuole biogenesis GO:0044090 positive regulation of vacuole organization GO:0044090 Any process that activates or increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a vacuole. GOC:jl GOC:mah positive regulation of vacuole organisation GOC:mah positive regulation of vacuole biogenesis GOC:mah A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a membrane. biological_process GO:0044091 membrane biogenesis GO:0044091 A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a membrane. GOC:jl A ribonucleoprotein complex that contains aminoacylated initiator methionine tRNA, GTP, and initiation factor 2 (either eIF2 in eukaryotes, or IF2 in prokaryotes). In prokaryotes, fMet-tRNA (initiator) is used rather than Met-tRNA (initiator). jl 2009-10-22T02:38:55Z translation initiation (ternary) complex Met-tRNA/eIF2.GTP ternary complex cellular_component GO:0044207 translation initiation ternary complex GO:0044207 A ribonucleoprotein complex that contains aminoacylated initiator methionine tRNA, GTP, and initiation factor 2 (either eIF2 in eukaryotes, or IF2 in prokaryotes). In prokaryotes, fMet-tRNA (initiator) is used rather than Met-tRNA (initiator). GOC:jl The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism. Wikipedia:Primary_metabolite primary metabolism biological_process GO:0044238 primary metabolic process GO:0044238 The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism. GOC:go_curators The chemical reactions and pathways resulting in the formation of compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione. sulfur compound anabolism sulfur compound biosynthesis sulfur compound formation sulfur compound synthesis sulfur biosynthesis sulfur biosynthetic process biological_process GO:0044272 sulfur compound biosynthetic process GO:0044272 The chemical reactions and pathways resulting in the formation of compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione. GOC:jl The chemical reactions and pathways involving small molecules, any low molecular weight, monomeric, non-encoded molecule. jl 2010-01-26T12:05:20Z small molecule metabolism biological_process GO:0044281 Small molecules in GO include monosaccharides but exclude disaccharides and polysaccharides. small molecule metabolic process GO:0044281 The chemical reactions and pathways involving small molecules, any low molecular weight, monomeric, non-encoded molecule. GOC:curators GOC:pde GOC:vw The chemical reactions and pathways resulting in the formation of small molecules, any low molecular weight, monomeric, non-encoded molecule. jl 2010-01-26T12:06:49Z small molecule biosynthesis biological_process GO:0044283 Small molecules in GO include monosaccharides but exclude disaccharides and polysaccharides. small molecule biosynthetic process GO:0044283 The chemical reactions and pathways resulting in the formation of small molecules, any low molecular weight, monomeric, non-encoded molecule. GOC:curators GOC:pde GOC:vw The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections. jl 2010-02-05T10:37:16Z FBbt:00005107 FMA:67301 Wikipedia:Cell_body cell soma cellular_component GO:0044297 Note that 'cell body' and 'cell soma' are not used in the literature for cells that lack projections, nor for some cells (e.g. yeast with mating projections) that do have projections. cell body GO:0044297 The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections. GOC:go_curators A small membranous protrusion, often ending in a bulbous head and attached to the neuron by a narrow stalk or neck. jl 2010-02-05T04:25:10Z spine NIF_Subcellular:sao1145756102 cellular_component GO:0044309 neuron spine GO:0044309 A small membranous protrusion, often ending in a bulbous head and attached to the neuron by a narrow stalk or neck. ISBN:0198504888 NIF_Subcellular:sao1145756102 Any apoptotic process in a fibroblast, a connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules. jl 2010-09-23T11:33:38Z fibroblast apoptosis biological_process GO:0044346 fibroblast apoptotic process GO:0044346 Any apoptotic process in a fibroblast, a connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules. CL:0000057 GOC:jl GOC:mtg_apoptosis GOC:yaf A process in which a protein is transported to, or maintained in, a location within the cytoskeleton. jl 2011-12-13T11:43:24Z protein localisation to cytoskeleton biological_process GO:0044380 protein localization to cytoskeleton GO:0044380 A process in which a protein is transported to, or maintained in, a location within the cytoskeleton. GOC:jl protein localisation to cytoskeleton GOC:mah Any process evolved to enable an interaction with an organism of a different species. Reactome:R-HSA-9824443 interaction with another species interspecies interaction interspecies interaction between organisms interspecies interaction with other organisms biological_process GO:0044419 biological process involved in interspecies interaction between organisms GO:0044419 Any process evolved to enable an interaction with an organism of a different species. GOC:cc Reactome:R-HSA-9824443 Parasitic Infection Pathways The aggregation, arrangement and bonding together of a set of components to form a motile cilium. krc 2015-02-06T17:23:23Z GO:1903887 biological_process motile primary cilia assembly motile primary cilia formation motile primary cilium assembly motile primary cilium formation nodal cilium assembly nodal cilium formation GO:0044458 motile cilium assembly GO:0044458 The aggregation, arrangement and bonding together of a set of components to form a motile cilium. GOC:TermGenie GOC:cilia GOC:krc GO_REF:0000079 PMID:19776033 PMID:21129373 ZFIN:dsf motile primary cilia assembly GOC:TermGenie motile primary cilia formation GOC:TermGenie motile primary cilium formation GOC:TermGenie nodal cilium assembly GOC:TermGenie nodal cilium formation GOC:TermGenie The chemical reactions and pathways resulting in the formation of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon. jl 2012-03-29T01:55:18Z secondary metabolite biosynthesis biological_process GO:0044550 secondary metabolite biosynthetic process GO:0044550 The chemical reactions and pathways resulting in the formation of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon. GOC:jl A change in the morphology or behavior of a chondrocyte resulting from exposure to an activating factor such as a cellular or soluble ligand. A chondrocyte is a polymorphic cell that forms cartilage. jl 2012-04-05T04:45:38Z biological_process GO:0044566 chondrocyte activation GO:0044566 A change in the morphology or behavior of a chondrocyte resulting from exposure to an activating factor such as a cellular or soluble ligand. A chondrocyte is a polymorphic cell that forms cartilage. CL:0000138 GOC:jl A biological process that directly contributes to the process of producing new individuals, involving another organism. jl 2012-09-19T15:56:30Z biological_process GO:0044703 multi-organism reproductive process GO:0044703 A biological process that directly contributes to the process of producing new individuals, involving another organism. GOC:jl A multicellular organism process which involves another multicellular organism of the same or different species. jl 2012-09-19T16:06:16Z biological_process GO:0044706 multi-multicellular organism process GO:0044706 A multicellular organism process which involves another multicellular organism of the same or different species. GOC:jl The directed movement of proteins into an intracellular organelle, across a membrane. jl 2012-11-07T15:37:36Z biological_process GO:0044743 protein transmembrane import into intracellular organelle GO:0044743 The directed movement of proteins into an intracellular organelle, across a membrane. GOC:jl A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole. jl 2013-03-27T15:09:58Z microtubule-based flagellum organization biological_process GO:0044782 Note that we deem cilium and microtubule-based flagellum to be equivalent. cilium organization GO:0044782 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole. GOC:cilia GOC:jl The joining of the lipid bilayer membrane that surround a cell with that of another cell, producing a single cell. GO:0006947 cell fusion cell-cell fusion biological_process GO:0045026 plasma membrane fusion GO:0045026 The joining of the lipid bilayer membrane that surround a cell with that of another cell, producing a single cell. GOC:elh GOC:mtg_muscle The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets during M phase of the meiotic cell cycle. biological_process GO:0045132 meiotic chromosome segregation GO:0045132 The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets during M phase of the meiotic cell cycle. GOC:ai GOC:mah The process whose specific outcome is the progression of the primary sexual characteristics over time, from their formation to the mature structures. The primary sexual characteristics are the testes in males and the ovaries in females and they develop in response to sex hormone secretion. biological_process GO:0045137 development of primary sexual characteristics GO:0045137 The process whose specific outcome is the progression of the primary sexual characteristics over time, from their formation to the mature structures. The primary sexual characteristics are the testes in males and the ovaries in females and they develop in response to sex hormone secretion. GOC:ai The cellular developmental process by which a cell establishes the intrinsic character of a cell or tissue region irreversibly committing it to a particular fate. biological_process GO:0045165 Note that this term was 'cell fate determination' but the term name was changed to better match its existing definition and the child term 'cell fate determination; GO:0001709' was also created. cell fate commitment GO:0045165 The cellular developmental process by which a cell establishes the intrinsic character of a cell or tissue region irreversibly committing it to a particular fate. ISBN:0716731185 Signaling at long or short range between cells that results in the commitment of a cell to a certain fate. cell fate commitment, cell-cell signaling cell fate commitment, cell-cell signalling cell-cell signaling during in cell fate commitment cell-cell signaling resulting in cell fate commitment cell-cell signalling during cell fate commitment cell-cell signalling resulting in cell fate commitment cell-cell signalling involved in cell fate specification biological_process GO:0045168 cell-cell signaling involved in cell fate commitment GO:0045168 Signaling at long or short range between cells that results in the commitment of a cell to a certain fate. GOC:dph GOC:go_curators GOC:tb cell-cell signalling involved in cell fate specification GOC:dph GOC:tb The directed movement of a protein to a specific location. establishment of protein localisation protein positioning protein recruitment biological_process GO:0045184 establishment of protein localization GO:0045184 The directed movement of a protein to a specific location. GOC:bf establishment of protein localisation GOC:mah Any process in which a protein is maintained in a location and prevented from moving elsewhere. These include sequestration, stabilization to prevent transport elsewhere and the active retrieval of proteins that do move away. active protein retrieval protein retention protein sequestering biological_process maintenance of protein localization GO:0045185 maintenance of protein location GO:0045185 Any process in which a protein is maintained in a location and prevented from moving elsewhere. These include sequestration, stabilization to prevent transport elsewhere and the active retrieval of proteins that do move away. GOC:bf maintenance of protein localization GOC:dph GOC:tb Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of a neuroblast cell, a progenitor of the central nervous system. GO:0043339 GO:0043342 establishment and/or maintenance of neuroblast cell polarity biological_process GO:0045196 establishment or maintenance of neuroblast polarity GO:0045196 Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of a neuroblast cell, a progenitor of the central nervous system. GOC:bf GOC:mah GOC:mtg_sensu PMID:19375318 PMID:20066083 The specification and formation of the apicobasal polarity of a neuroblast cell, a progenitor of the central nervous system. GO:0043340 GO:0043343 establishment of neuroblast cell polarity biological_process GO:0045200 establishment of neuroblast polarity GO:0045200 The specification and formation of the apicobasal polarity of a neuroblast cell, a progenitor of the central nervous system. GOC:bf GOC:mtg_sensu The junction between an axon of one neuron and a dendrite of another neuron, a muscle fiber or a glial cell. As the axon approaches the synapse it enlarges into a specialized structure, the presynaptic terminal bouton, which contains mitochondria and synaptic vesicles. At the tip of the terminal bouton is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic terminal bouton secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane. NIF_Subcellular:sao914572699 Wikipedia:Chemical_synapse synaptic junction mixed synapse cellular_component electrotonic synapse GO:0045202 synapse GO:0045202 The junction between an axon of one neuron and a dendrite of another neuron, a muscle fiber or a glial cell. As the axon approaches the synapse it enlarges into a specialized structure, the presynaptic terminal bouton, which contains mitochondria and synaptic vesicles. At the tip of the terminal bouton is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic terminal bouton secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane. GOC:aruk ISBN:0198506732 PMID:24619342 PMID:29383328 PMID:31998110 mixed synapse NIF_Subcellular:sao1506103497 electrotonic synapse NIF_Subcellular:sao1311109124 The myofibril assembly process that results in the organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs. GO:0006938 sarcomere alignment sarcomere organisation biological_process GO:0045214 sarcomere organization GO:0045214 The myofibril assembly process that results in the organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs. GOC:bf A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell-cell junction. A cell-cell junction is a specialized region of connection between two cells. Reactome:R-HSA-421270 cell-cell junction assembly and maintenance cell-cell junction organisation intercellular junction assembly and maintenance biological_process cell-cell junction biogenesis GO:0045216 cell-cell junction organization GO:0045216 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell-cell junction. A cell-cell junction is a specialized region of connection between two cells. GOC:ai GOC:dph GOC:jl GOC:mah Reactome:R-HSA-421270 Cell-cell junction organization cell-cell junction organisation GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of external structures that lie outside the plasma membrane and surround the entire cell. external encapsulating structure organisation external encapsulating structure organization and biogenesis biological_process GO:0045229 external encapsulating structure organization GO:0045229 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of external structures that lie outside the plasma membrane and surround the entire cell. GOC:ai GOC:dph GOC:jl GOC:mah external encapsulating structure organization and biogenesis GOC:dph GOC:jl GOC:mah A change in morphology and behavior of a leukocyte resulting from exposure to a specific antigen, mitogen, cytokine, cellular ligand, or soluble factor. Wikipedia:Immunologic_activation immune cell activation leucocyte activation biological_process GO:0045321 leukocyte activation GO:0045321 A change in morphology and behavior of a leukocyte resulting from exposure to a specific antigen, mitogen, cytokine, cellular ligand, or soluble factor. GOC:add The process in which a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat. adipocyte cell differentiation adipocyte differentiation adipose cell differentiation biological_process adipogenesis GO:0045444 fat cell differentiation GO:0045444 The process in which a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat. CL:0000136 GOC:go_curators The process in which a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into striated muscle fibers. myoblast cell differentiation biological_process GO:0045445 myoblast differentiation GO:0045445 The process in which a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into striated muscle fibers. CL:0000056 GOC:go_curators GOC:mtg_muscle The process in which a mesodermal, bone marrow or neural crest cell acquires specialized features of an endothelial cell, a thin flattened cell. A layer of such cells lines the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium. biological_process GO:0045446 endothelial cell differentiation GO:0045446 The process in which a mesodermal, bone marrow or neural crest cell acquires specialized features of an endothelial cell, a thin flattened cell. A layer of such cells lines the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium. CL:0000115 GOC:go_curators Any process that modulates the frequency, rate or extent of cell differentiation, the process in which relatively unspecialized cells acquire specialized structural and functional features. biological_process GO:0045595 regulation of cell differentiation GO:0045595 Any process that modulates the frequency, rate or extent of cell differentiation, the process in which relatively unspecialized cells acquire specialized structural and functional features. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of cell differentiation. down regulation of cell differentiation down-regulation of cell differentiation downregulation of cell differentiation inhibition of cell differentiation biological_process GO:0045596 negative regulation of cell differentiation GO:0045596 Any process that stops, prevents, or reduces the frequency, rate or extent of cell differentiation. GOC:go_curators Any process that activates or increases the frequency, rate or extent of cell differentiation. up regulation of cell differentiation up-regulation of cell differentiation upregulation of cell differentiation activation of cell differentiation stimulation of cell differentiation biological_process GO:0045597 positive regulation of cell differentiation GO:0045597 Any process that activates or increases the frequency, rate or extent of cell differentiation. GOC:go_curators Any process that modulates the frequency, rate or extent of adipocyte differentiation. regulation of adipocyte cell differentiation regulation of adipocyte differentiation biological_process GO:0045598 regulation of fat cell differentiation GO:0045598 Any process that modulates the frequency, rate or extent of adipocyte differentiation. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of adipocyte differentiation. down regulation of fat cell differentiation down-regulation of fat cell differentiation downregulation of fat cell differentiation negative regulation of adipocyte cell differentiation negative regulation of adipocyte differentiation inhibition of fat cell differentiation biological_process GO:0045599 negative regulation of fat cell differentiation GO:0045599 Any process that stops, prevents, or reduces the frequency, rate or extent of adipocyte differentiation. GOC:go_curators Any process that activates or increases the frequency, rate or extent of adipocyte differentiation. positive regulation of adipocyte cell differentiation positive regulation of adipocyte differentiation up regulation of fat cell differentiation up-regulation of fat cell differentiation upregulation of fat cell differentiation activation of fat cell differentiation stimulation of fat cell differentiation biological_process GO:0045600 positive regulation of fat cell differentiation GO:0045600 Any process that activates or increases the frequency, rate or extent of adipocyte differentiation. GOC:go_curators Any process that modulates the frequency, rate or extent of endothelial cell differentiation. biological_process GO:0045601 regulation of endothelial cell differentiation GO:0045601 Any process that modulates the frequency, rate or extent of endothelial cell differentiation. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of endothelial cell differentiation. down regulation of endothelial cell differentiation down-regulation of endothelial cell differentiation downregulation of endothelial cell differentiation inhibition of endothelial cell differentiation biological_process GO:0045602 negative regulation of endothelial cell differentiation GO:0045602 Any process that stops, prevents, or reduces the frequency, rate or extent of endothelial cell differentiation. GOC:go_curators Any process that activates or increases the frequency, rate or extent of endothelial cell differentiation. up regulation of endothelial cell differentiation up-regulation of endothelial cell differentiation upregulation of endothelial cell differentiation activation of endothelial cell differentiation stimulation of endothelial cell differentiation biological_process GO:0045603 positive regulation of endothelial cell differentiation GO:0045603 Any process that activates or increases the frequency, rate or extent of endothelial cell differentiation. GOC:go_curators Any process that modulates the frequency, rate or extent of epidermal cell differentiation. biological_process regulation of hypodermal cell differentiation GO:0045604 regulation of epidermal cell differentiation GO:0045604 Any process that modulates the frequency, rate or extent of epidermal cell differentiation. GOC:go_curators regulation of hypodermal cell differentiation GOC:kmv GOC:rk Any process that stops, prevents, or reduces the frequency, rate or extent of epidermal cell differentiation. down regulation of epidermal cell differentiation down-regulation of epidermal cell differentiation downregulation of epidermal cell differentiation inhibition of epidermal cell differentiation biological_process negative regulation of hypodermal cell differentiation GO:0045605 negative regulation of epidermal cell differentiation GO:0045605 Any process that stops, prevents, or reduces the frequency, rate or extent of epidermal cell differentiation. GOC:go_curators negative regulation of hypodermal cell differentiation GOC:kmv GOC:rk Any process that activates or increases the frequency, rate or extent of epidermal cell differentiation. up regulation of epidermal cell differentiation up-regulation of epidermal cell differentiation upregulation of epidermal cell differentiation activation of epidermal cell differentiation stimulation of epidermal cell differentiation biological_process positive regulation of hypodermal cell differentiation GO:0045606 positive regulation of epidermal cell differentiation GO:0045606 Any process that activates or increases the frequency, rate or extent of epidermal cell differentiation. GOC:go_curators positive regulation of hypodermal cell differentiation GOC:kmv GOC:rk Any process that modulates the frequency, rate or extent of lymphocyte differentiation. biological_process regulation of lymphocyte development GO:0045619 Note that immunologists typically use the word 'development' to refer to cells of B or T cell lineages undergoing the process that GO describes as 'cell differentiation'. regulation of lymphocyte differentiation GO:0045619 Any process that modulates the frequency, rate or extent of lymphocyte differentiation. GOC:go_curators regulation of lymphocyte development GOC:add Any process that stops, prevents, or reduces the frequency, rate or extent of lymphocyte differentiation. down regulation of lymphocyte differentiation down-regulation of lymphocyte differentiation downregulation of lymphocyte differentiation inhibition of lymphocyte differentiation biological_process negative regulation of lymphocyte development GO:0045620 Note that immunologists typically use the word 'development' to refer to cells of B or T cell lineages undergoing the process that GO describes as 'cell differentiation'. negative regulation of lymphocyte differentiation GO:0045620 Any process that stops, prevents, or reduces the frequency, rate or extent of lymphocyte differentiation. GOC:go_curators negative regulation of lymphocyte development GOC:add Any process that activates or increases the frequency, rate or extent of lymphocyte differentiation. up regulation of lymphocyte differentiation up-regulation of lymphocyte differentiation upregulation of lymphocyte differentiation activation of lymphocyte differentiation stimulation of lymphocyte differentiation biological_process positive regulation of lymphocyte development GO:0045621 Note that immunologists typically use the word 'development' to refer to cells of B or T cell lineages undergoing the process that GO describes as 'cell differentiation'. positive regulation of lymphocyte differentiation GO:0045621 Any process that activates or increases the frequency, rate or extent of lymphocyte differentiation. GOC:go_curators positive regulation of lymphocyte development GOC:add Any process that modulates the frequency, rate or extent of myeloid cell differentiation. Reactome:R-HSA-8939246 biological_process GO:0045637 regulation of myeloid cell differentiation GO:0045637 Any process that modulates the frequency, rate or extent of myeloid cell differentiation. GOC:go_curators Reactome:R-HSA-8939246 RUNX1 regulates transcription of genes involved in differentiation of myeloid cells Any process that stops, prevents, or reduces the frequency, rate or extent of myeloid cell differentiation. down regulation of myeloid cell differentiation down-regulation of myeloid cell differentiation downregulation of myeloid cell differentiation inhibition of myeloid cell differentiation biological_process GO:0045638 negative regulation of myeloid cell differentiation GO:0045638 Any process that stops, prevents, or reduces the frequency, rate or extent of myeloid cell differentiation. GOC:go_curators Any process that activates or increases the frequency, rate or extent of myeloid cell differentiation. up regulation of myeloid cell differentiation up-regulation of myeloid cell differentiation upregulation of myeloid cell differentiation activation of myeloid cell differentiation stimulation of myeloid cell differentiation biological_process GO:0045639 positive regulation of myeloid cell differentiation GO:0045639 Any process that activates or increases the frequency, rate or extent of myeloid cell differentiation. GOC:go_curators Any process that modulates the frequency, rate or extent of erythrocyte differentiation. regulation of RBC differentiation regulation of red blood cell differentiation biological_process GO:0045646 regulation of erythrocyte differentiation GO:0045646 Any process that modulates the frequency, rate or extent of erythrocyte differentiation. GOC:go_curators regulation of RBC differentiation CL:0000232 regulation of red blood cell differentiation CL:0000232 Any process that stops, prevents, or reduces the frequency, rate or extent of erythrocyte differentiation. down regulation of erythrocyte differentiation down-regulation of erythrocyte differentiation downregulation of erythrocyte differentiation negative regulation of RBC differentiation negative regulation of red blood cell differentiation inhibition of erythrocyte differentiation biological_process GO:0045647 negative regulation of erythrocyte differentiation GO:0045647 Any process that stops, prevents, or reduces the frequency, rate or extent of erythrocyte differentiation. GOC:go_curators negative regulation of RBC differentiation CL:0000232 negative regulation of red blood cell differentiation CL:0000232 Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation. positive regulation of RBC differentiation positive regulation of red blood cell differentiation up regulation of erythrocyte differentiation up-regulation of erythrocyte differentiation upregulation of erythrocyte differentiation activation of erythrocyte differentiation stimulation of erythrocyte differentiation biological_process GO:0045648 positive regulation of erythrocyte differentiation GO:0045648 Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation. GOC:go_curators positive regulation of RBC differentiation CL:0000232 positive regulation of red blood cell differentiation CL:0000232 Any process that modulates the frequency, rate or extent of megakaryocyte differentiation. Reactome:R-HSA-8936459 biological_process GO:0045652 regulation of megakaryocyte differentiation GO:0045652 Any process that modulates the frequency, rate or extent of megakaryocyte differentiation. GOC:go_curators Reactome:R-HSA-8936459 RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function Any process that stops, prevents, or reduces the frequency, rate or extent of megakaryocyte differentiation. down regulation of megakaryocyte differentiation down-regulation of megakaryocyte differentiation downregulation of megakaryocyte differentiation inhibition of megakaryocyte differentiation biological_process GO:0045653 negative regulation of megakaryocyte differentiation GO:0045653 Any process that stops, prevents, or reduces the frequency, rate or extent of megakaryocyte differentiation. GOC:go_curators Any process that activates or increases the frequency, rate or extent of megakaryocyte differentiation. up regulation of megakaryocyte differentiation up-regulation of megakaryocyte differentiation upregulation of megakaryocyte differentiation activation of megakaryocyte differentiation stimulation of megakaryocyte differentiation biological_process GO:0045654 positive regulation of megakaryocyte differentiation GO:0045654 Any process that activates or increases the frequency, rate or extent of megakaryocyte differentiation. GOC:go_curators Any process that modulates the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. biological_process GO:0045661 regulation of myoblast differentiation GO:0045661 Any process that modulates the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. CL:0000056 GOC:go_curators GOC:mtg_muscle Any process that stops, prevents, or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. down regulation of myoblast differentiation down-regulation of myoblast differentiation downregulation of myoblast differentiation inhibition of myoblast differentiation biological_process GO:0045662 negative regulation of myoblast differentiation GO:0045662 Any process that stops, prevents, or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. CL:0000056 GOC:go_curators GOC:mtg_muscle Any process that activates or increases the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. up regulation of myoblast differentiation up-regulation of myoblast differentiation upregulation of myoblast differentiation activation of myoblast differentiation stimulation of myoblast differentiation biological_process GO:0045663 positive regulation of myoblast differentiation GO:0045663 Any process that activates or increases the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. CL:0000056 GOC:go_curators GOC:mtg_muscle Any process that modulates the frequency, rate or extent of neuron differentiation. biological_process GO:0045664 regulation of neuron differentiation GO:0045664 Any process that modulates the frequency, rate or extent of neuron differentiation. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of neuron differentiation. down regulation of neuron differentiation down-regulation of neuron differentiation downregulation of neuron differentiation inhibition of neuron differentiation biological_process GO:0045665 negative regulation of neuron differentiation GO:0045665 Any process that stops, prevents, or reduces the frequency, rate or extent of neuron differentiation. GOC:go_curators Any process that activates or increases the frequency, rate or extent of neuron differentiation. up regulation of neuron differentiation up-regulation of neuron differentiation upregulation of neuron differentiation activation of neuron differentiation stimulation of neuron differentiation biological_process GO:0045666 positive regulation of neuron differentiation GO:0045666 Any process that activates or increases the frequency, rate or extent of neuron differentiation. GOC:go_curators Any process that modulates the frequency, rate or extent of epidermis development. regulation of epidermal development biological_process regulation of hypodermis development GO:0045682 regulation of epidermis development GO:0045682 Any process that modulates the frequency, rate or extent of epidermis development. GOC:go_curators regulation of hypodermis development GOC:kmv GOC:rk Any process that stops, prevents, or reduces the frequency, rate or extent of epidermis development. down regulation of epidermis development down-regulation of epidermis development downregulation of epidermis development negative regulation of epidermal development inhibition of epidermis development biological_process negative regulation of hypodermis development GO:0045683 negative regulation of epidermis development GO:0045683 Any process that stops, prevents, or reduces the frequency, rate or extent of epidermis development. GOC:go_curators negative regulation of hypodermis development GOC:kmv GOC:rk Any process that activates or increases the frequency, rate or extent of epidermis development. positive regulation of epidermal development up regulation of epidermis development up-regulation of epidermis development upregulation of epidermis development activation of epidermis development stimulation of epidermis development biological_process positive regulation of hypodermis development GO:0045684 positive regulation of epidermis development GO:0045684 Any process that activates or increases the frequency, rate or extent of epidermis development. GOC:go_curators positive regulation of hypodermis development GOC:kmv GOC:rk Any process that modulates the frequency, rate or extent of glia cell differentiation. regulation of glia cell differentiation regulation of neuroglia differentiation biological_process GO:0045685 regulation of glial cell differentiation GO:0045685 Any process that modulates the frequency, rate or extent of glia cell differentiation. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of glia cell differentiation. down regulation of glial cell differentiation down-regulation of glial cell differentiation downregulation of glial cell differentiation negative regulation of glia cell differentiation negative regulation of neuroglia differentiation inhibition of glial cell differentiation biological_process GO:0045686 negative regulation of glial cell differentiation GO:0045686 Any process that stops, prevents, or reduces the frequency, rate or extent of glia cell differentiation. GOC:go_curators Any process that activates or increases the frequency, rate or extent of glia cell differentiation. positive regulation of glia cell differentiation positive regulation of neuroglia differentiation up regulation of glial cell differentiation up-regulation of glial cell differentiation upregulation of glial cell differentiation activation of glial cell differentiation stimulation of glial cell differentiation biological_process GO:0045687 positive regulation of glial cell differentiation GO:0045687 Any process that activates or increases the frequency, rate or extent of glia cell differentiation. GOC:go_curators Any process that activates or increases the frequency, rate or extent of the formation of a cilium. positive regulation of flagellum assembly up regulation of cilium assembly up-regulation of cilium assembly upregulation of cilium assembly activation of cilium assembly stimulation of cilium assembly biological_process positive regulation of flagellum biogenesis GO:0045724 positive regulation of cilium assembly GO:0045724 Any process that activates or increases the frequency, rate or extent of the formation of a cilium. GOC:cilia GOC:go_curators positive regulation of flagellum biogenesis GOC:mah Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA. GO:0045946 positive regulation of protein anabolism positive regulation of protein biosynthesis positive regulation of protein biosynthetic process positive regulation of protein formation positive regulation of protein synthesis up regulation of protein biosynthetic process up-regulation of protein biosynthetic process upregulation of protein biosynthetic process activation of protein biosynthetic process stimulation of protein biosynthetic process biological_process GO:0045727 positive regulation of translation GO:0045727 Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA. GOC:dph GOC:go_curators GOC:tb positive regulation of protein biosynthetic process GOC:tb Any process that stops, prevents, or reduces the frequency, rate or extent of action potential creation, propagation or termination. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. down regulation of action potential down-regulation of action potential downregulation of action potential inhibition of action potential biological_process GO:0045759 negative regulation of action potential GO:0045759 Any process that stops, prevents, or reduces the frequency, rate or extent of action potential creation, propagation or termination. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. GOC:go_curators Any process that activates or increases the frequency, rate or extent of action potential creation, propagation or termination. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. up regulation of action potential up-regulation of action potential upregulation of action potential activation of action potential stimulation of action potential biological_process GO:0045760 positive regulation of action potential GO:0045760 Any process that activates or increases the frequency, rate or extent of action potential creation, propagation or termination. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amino acid. down regulation of amino acid metabolic process down-regulation of amino acid metabolic process downregulation of amino acid metabolic process negative regulation of amino acid metabolism inhibition of amino acid metabolic process biological_process GO:0045763 negative regulation of amino acid metabolic process GO:0045763 Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amino acid. GOC:go_curators Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amino acid. positive regulation of amino acid metabolism positive regulation of cellular amino acid metabolic process up regulation of amino acid metabolic process up-regulation of amino acid metabolic process upregulation of amino acid metabolic process activation of amino acid metabolic process stimulation of amino acid metabolic process biological_process GO:0045764 positive regulation of amino acid metabolic process GO:0045764 Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amino acid. GOC:go_curators Any process that modulates the frequency, rate or extent of angiogenesis. biological_process GO:0045765 regulation of angiogenesis GO:0045765 Any process that modulates the frequency, rate or extent of angiogenesis. GOC:go_curators Any process that activates or increases angiogenesis. up regulation of angiogenesis up-regulation of angiogenesis upregulation of angiogenesis activation of angiogenesis stimulation of angiogenesis biological_process GO:0045766 positive regulation of angiogenesis GO:0045766 Any process that activates or increases angiogenesis. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of asymmetric cell division. down regulation of asymmetric cell division down-regulation of asymmetric cell division downregulation of asymmetric cell division inhibition of asymmetric cell division biological_process GO:0045769 negative regulation of asymmetric cell division GO:0045769 Any process that stops, prevents, or reduces the frequency, rate or extent of asymmetric cell division. GOC:go_curators Any process that activates or increases the frequency, rate or extent of asymmetric cell division. up regulation of asymmetric cell division up-regulation of asymmetric cell division upregulation of asymmetric cell division activation of asymmetric cell division stimulation of asymmetric cell division biological_process GO:0045770 positive regulation of asymmetric cell division GO:0045770 Any process that activates or increases the frequency, rate or extent of asymmetric cell division. GOC:go_curators Any process that activates or increases the frequency, rate or extent of ossification, the formation of bone or of a bony substance or the conversion of fibrous tissue or of cartilage into bone or a bony substance. positive regulation of bone biosynthesis positive regulation of bone formation up regulation of ossification up-regulation of ossification upregulation of ossification activation of ossification stimulation of ossification biological_process GO:0045778 positive regulation of ossification GO:0045778 Any process that activates or increases the frequency, rate or extent of ossification, the formation of bone or of a bony substance or the conversion of fibrous tissue or of cartilage into bone or a bony substance. GOC:go_curators Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle. Reactome:R-HSA-193670 down regulation of progression through cell cycle down-regulation of progression through cell cycle downregulation of progression through cell cycle negative regulation of cell cycle progression negative regulation of progression through cell cycle inhibition of progression through cell cycle biological_process GO:0045786 negative regulation of cell cycle GO:0045786 Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle. GOC:dph GOC:go_curators GOC:tb Reactome:R-HSA-193670 p75NTR negatively regulates cell cycle via SC1 Any process that activates or increases the rate or extent of progression through the cell cycle. Reactome:R-HSA-8849470 positive regulation of cell cycle progression positive regulation of progression through cell cycle up regulation of progression through cell cycle up-regulation of progression through cell cycle upregulation of progression through cell cycle activation of progression through cell cycle stimulation of progression through cell cycle biological_process GO:0045787 positive regulation of cell cycle GO:0045787 Any process that activates or increases the rate or extent of progression through the cell cycle. GOC:go_curators Reactome:R-HSA-8849470 PTK6 Regulates Cell Cycle positive regulation of progression through cell cycle GOC:dph GOC:tb Any process that stops, prevents, or reduces the frequency, rate or extent of heart contraction. down regulation of heart contraction down-regulation of heart contraction downregulation of heart contraction inhibition of heart contraction biological_process negative regulation of cardiac contraction GO:0045822 negative regulation of heart contraction GO:0045822 Any process that stops, prevents, or reduces the frequency, rate or extent of heart contraction. GOC:go_curators Any process that activates or increases the frequency, rate or extent of heart contraction. positive regulation of cardiac contraction up regulation of heart contraction up-regulation of heart contraction upregulation of heart contraction activation of heart contraction stimulation of heart contraction biological_process GO:0045823 positive regulation of heart contraction GO:0045823 Any process that activates or increases the frequency, rate or extent of heart contraction. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving lipids. down regulation of lipid metabolic process down-regulation of lipid metabolic process downregulation of lipid metabolic process negative regulation of lipid metabolism inhibition of lipid metabolic process biological_process GO:0045833 negative regulation of lipid metabolic process GO:0045833 Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving lipids. GOC:go_curators Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving lipids. positive regulation of lipid metabolism up regulation of lipid metabolic process up-regulation of lipid metabolic process upregulation of lipid metabolic process activation of lipid metabolic process stimulation of lipid metabolic process biological_process GO:0045834 positive regulation of lipid metabolic process GO:0045834 Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving lipids. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of meiosis. down regulation of meiosis down-regulation of meiosis downregulation of meiosis negative regulation of meiosis inhibition of meiosis biological_process GO:0045835 negative regulation of meiotic nuclear division GO:0045835 Any process that stops, prevents, or reduces the frequency, rate or extent of meiosis. GOC:go_curators Any process that activates or increases the frequency, rate or extent of meiosis. positive regulation of meiosis up regulation of meiosis up-regulation of meiosis upregulation of meiosis activation of meiosis stimulation of meiosis biological_process GO:0045836 positive regulation of meiotic nuclear division GO:0045836 Any process that activates or increases the frequency, rate or extent of meiosis. GOC:go_curators Any process that stops, prevents or reduces the rate or extent of mitosis. Mitosis is the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother. down regulation of mitosis down-regulation of mitosis downregulation of mitosis negative regulation of mitosis inhibition of mitosis biological_process GO:0045839 negative regulation of mitotic nuclear division GO:0045839 Any process that stops, prevents or reduces the rate or extent of mitosis. Mitosis is the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother. GOC:dph GOC:go_curators GOC:tb Any process that activates or increases the frequency, rate or extent of mitosis. positive regulation of mitosis up regulation of mitosis up-regulation of mitosis upregulation of mitosis activation of mitosis mitogenic activity stimulation of mitosis biological_process GO:0045840 positive regulation of mitotic nuclear division GO:0045840 Any process that activates or increases the frequency, rate or extent of mitosis. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle development. down regulation of striated muscle development down-regulation of striated muscle development downregulation of striated muscle development inhibition of striated muscle development biological_process GO:0045843 negative regulation of striated muscle tissue development GO:0045843 Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle development. GOC:go_curators Any process that activates or increases the frequency, rate or extent of striated muscle development. up regulation of striated muscle development up-regulation of striated muscle development upregulation of striated muscle development activation of striated muscle development stimulation of striated muscle development biological_process GO:0045844 positive regulation of striated muscle tissue development GO:0045844 Any process that activates or increases the frequency, rate or extent of striated muscle development. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of translational elongation. down regulation of translational elongation down-regulation of translational elongation downregulation of translational elongation inhibition of translational elongation biological_process GO:0045900 negative regulation of translational elongation GO:0045900 Any process that stops, prevents, or reduces the frequency, rate or extent of translational elongation. GOC:go_curators Any process that activates or increases the frequency, rate or extent of translational elongation. up regulation of translational elongation up-regulation of translational elongation upregulation of translational elongation activation of translational elongation stimulation of translational elongation biological_process GO:0045901 positive regulation of translational elongation GO:0045901 Any process that activates or increases the frequency, rate or extent of translational elongation. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of translational termination. down regulation of translational termination down-regulation of translational termination downregulation of translational termination inhibition of translational termination biological_process GO:0045904 negative regulation of translational termination GO:0045904 Any process that stops, prevents, or reduces the frequency, rate or extent of translational termination. GOC:go_curators Any process that activates or increases the frequency, rate or extent of translational termination. up regulation of translational termination up-regulation of translational termination upregulation of translational termination activation of translational termination stimulation of translational termination biological_process GO:0045905 positive regulation of translational termination GO:0045905 Any process that activates or increases the frequency, rate or extent of translational termination. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving carbohydrate. down regulation of carbohydrate metabolic process down-regulation of carbohydrate metabolic process downregulation of carbohydrate metabolic process negative regulation of carbohydrate metabolism inhibition of carbohydrate metabolic process biological_process GO:0045912 negative regulation of carbohydrate metabolic process GO:0045912 Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving carbohydrate. GOC:go_curators Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving carbohydrate. positive regulation of carbohydrate metabolism up regulation of carbohydrate metabolic process up-regulation of carbohydrate metabolic process upregulation of carbohydrate metabolic process activation of carbohydrate metabolic process stimulation of carbohydrate metabolic process biological_process GO:0045913 positive regulation of carbohydrate metabolic process GO:0045913 Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving carbohydrate. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving catecholamine. down regulation of catecholamine metabolic process down-regulation of catecholamine metabolic process downregulation of catecholamine metabolic process negative regulation of catecholamine metabolism inhibition of catecholamine metabolic process biological_process GO:0045914 negative regulation of catecholamine metabolic process GO:0045914 Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving catecholamine. GOC:go_curators Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving catecholamine. positive regulation of catecholamine metabolism up regulation of catecholamine metabolic process up-regulation of catecholamine metabolic process upregulation of catecholamine metabolic process activation of catecholamine metabolic process stimulation of catecholamine metabolic process biological_process GO:0045915 positive regulation of catecholamine metabolic process GO:0045915 Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving catecholamine. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of exocytosis. down regulation of exocytosis down-regulation of exocytosis downregulation of exocytosis inhibition of exocytosis biological_process GO:0045920 negative regulation of exocytosis GO:0045920 Any process that stops, prevents, or reduces the frequency, rate or extent of exocytosis. GOC:go_curators Any process that activates or increases the frequency, rate or extent of exocytosis. up regulation of exocytosis up-regulation of exocytosis upregulation of exocytosis activation of exocytosis stimulation of exocytosis biological_process GO:0045921 positive regulation of exocytosis GO:0045921 Any process that activates or increases the frequency, rate or extent of exocytosis. GOC:go_curators Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism. down regulation of growth down-regulation of growth downregulation of growth inhibition of growth biological_process GO:0045926 negative regulation of growth GO:0045926 Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism. GOC:go_curators Any process that activates or increases the rate or extent of growth, the increase in size or mass of all or part of an organism. up regulation of growth up-regulation of growth upregulation of growth activation of growth stimulation of growth biological_process GO:0045927 positive regulation of growth GO:0045927 Any process that activates or increases the rate or extent of growth, the increase in size or mass of all or part of an organism. GOC:go_curators Any process that stops, prevents or reduces the rate or extent of progression through the mitotic cell cycle. Reactome:R-HSA-8854050 down regulation of progression through mitotic cell cycle down-regulation of progression through mitotic cell cycle downregulation of progression through mitotic cell cycle negative regulation of mitotic cell cycle progression negative regulation of progression through mitotic cell cycle inhibition of progression through mitotic cell cycle biological_process GO:0045930 negative regulation of mitotic cell cycle GO:0045930 Any process that stops, prevents or reduces the rate or extent of progression through the mitotic cell cycle. GOC:dph GOC:go_curators GOC:tb Reactome:R-HSA-8854050 FBXL7 down-regulates AURKA during mitotic entry and in early mitosis negative regulation of progression through mitotic cell cycle GOC:dph GOC:tb Any process that activates or increases the rate or extent of progression through the mitotic cell cycle. positive regulation of mitotic cell cycle progression positive regulation of progression through mitotic cell cycle up regulation of progression through mitotic cell cycle up-regulation of progression through mitotic cell cycle upregulation of progression through mitotic cell cycle activation of progression through mitotic cell cycle stimulation of progression through mitotic cell cycle biological_process GO:0045931 positive regulation of mitotic cell cycle GO:0045931 Any process that activates or increases the rate or extent of progression through the mitotic cell cycle. GOC:dph GOC:go_curators GOC:tb positive regulation of progression through mitotic cell cycle GOC:dph GOC:tb Any process that stops, prevents, or reduces the frequency, rate or extent of muscle contraction. down regulation of muscle contraction down-regulation of muscle contraction downregulation of muscle contraction inhibition of muscle contraction biological_process GO:0045932 negative regulation of muscle contraction GO:0045932 Any process that stops, prevents, or reduces the frequency, rate or extent of muscle contraction. GOC:go_curators Any process that activates or increases the frequency, rate or extent of muscle contraction. up regulation of muscle contraction up-regulation of muscle contraction upregulation of muscle contraction activation of muscle contraction stimulation of muscle contraction biological_process GO:0045933 positive regulation of muscle contraction GO:0045933 Any process that activates or increases the frequency, rate or extent of muscle contraction. GOC:go_curators Any cellular process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids. down regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process down-regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process downregulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism inhibition of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process biological_process negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process GO:0045934 negative regulation of nucleobase-containing compound metabolic process GO:0045934 Any cellular process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids. GOC:go_curators negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process GOC:dph GOC:tb Any cellular process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids. positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism up regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process up-regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process upregulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process activation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process stimulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process biological_process positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process GO:0045935 positive regulation of nucleobase-containing compound metabolic process GO:0045935 Any cellular process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids. GOC:go_curators positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process GOC:dph GOC:tb Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving steroids. down regulation of steroid metabolic process down-regulation of steroid metabolic process downregulation of steroid metabolic process negative regulation of steroid metabolism inhibition of steroid metabolic process biological_process GO:0045939 negative regulation of steroid metabolic process GO:0045939 Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving steroids. GOC:go_curators Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving steroids. positive regulation of steroid metabolism up regulation of steroid metabolic process up-regulation of steroid metabolic process upregulation of steroid metabolic process activation of steroid metabolic process stimulation of steroid metabolic process biological_process GO:0045940 positive regulation of steroid metabolic process GO:0045940 Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving steroids. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of translational initiation. down regulation of translational initiation down-regulation of translational initiation downregulation of translational initiation inhibition of translational initiation biological_process GO:0045947 negative regulation of translational initiation GO:0045947 Any process that stops, prevents, or reduces the frequency, rate or extent of translational initiation. GOC:go_curators Any process that activates or increases the frequency, rate or extent of translational initiation. up regulation of translational initiation up-regulation of translational initiation upregulation of translational initiation activation of translational initiation stimulation of translational initiation biological_process GO:0045948 positive regulation of translational initiation GO:0045948 Any process that activates or increases the frequency, rate or extent of translational initiation. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle contraction. down regulation of smooth muscle contraction down-regulation of smooth muscle contraction downregulation of smooth muscle contraction inhibition of smooth muscle contraction biological_process smooth muscle relaxation GO:0045986 negative regulation of smooth muscle contraction GO:0045986 Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle contraction. GOC:go_curators Any process that activates or increases the frequency, rate or extent of smooth muscle contraction. up regulation of smooth muscle contraction up-regulation of smooth muscle contraction upregulation of smooth muscle contraction activation of smooth muscle contraction stimulation of smooth muscle contraction biological_process GO:0045987 positive regulation of smooth muscle contraction GO:0045987 Any process that activates or increases the frequency, rate or extent of smooth muscle contraction. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle contraction. down regulation of striated muscle contraction down-regulation of striated muscle contraction downregulation of striated muscle contraction inhibition of striated muscle contraction biological_process GO:0045988 negative regulation of striated muscle contraction GO:0045988 Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle contraction. GOC:go_curators Any process that activates or increases the frequency, rate or extent of striated muscle contraction. up regulation of striated muscle contraction up-regulation of striated muscle contraction upregulation of striated muscle contraction activation of striated muscle contraction stimulation of striated muscle contraction biological_process GO:0045989 positive regulation of striated muscle contraction GO:0045989 Any process that activates or increases the frequency, rate or extent of striated muscle contraction. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of embryonic development. down regulation of embryonic development down-regulation of embryonic development downregulation of embryonic development inhibition of embryonic development biological_process GO:0045992 negative regulation of embryonic development GO:0045992 Any process that stops, prevents, or reduces the frequency, rate or extent of embryonic development. GOC:go_curators Any process that modulates the frequency, rate or extent of embryonic development. biological_process GO:0045995 regulation of embryonic development GO:0045995 Any process that modulates the frequency, rate or extent of embryonic development. GOC:go_curators The chemical reactions and pathways resulting in the formation of a nucleobase, a nitrogenous base that is a constituent of a nucleic acid. nucleobase anabolism nucleobase biosynthesis nucleobase formation nucleobase synthesis biological_process GO:0046112 nucleobase biosynthetic process GO:0046112 The chemical reactions and pathways resulting in the formation of a nucleobase, a nitrogenous base that is a constituent of a nucleic acid. GOC:ai The chemical reactions and pathways resulting in the formation of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring. phenol-containing compound anabolism phenol-containing compound biosynthesis phenol-containing compound formation phenol-containing compound synthesis biological_process GO:0046189 phenol-containing compound biosynthetic process GO:0046189 The chemical reactions and pathways resulting in the formation of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring. GOC:ai The chemical reactions and pathways resulting in the formation of indolalkylamines, indole or indole derivatives containing a primary, secondary, or tertiary amine group. Reactome:R-HSA-209931 indolalkylamine anabolism indolalkylamine biosynthesis indolalkylamine formation indolalkylamine synthesis biological_process GO:0046219 indolalkylamine biosynthetic process GO:0046219 The chemical reactions and pathways resulting in the formation of indolalkylamines, indole or indole derivatives containing a primary, secondary, or tertiary amine group. GOC:curators Reactome:R-HSA-209931 Serotonin and melatonin biosynthesis The chemical reactions and pathways resulting in the formation of carboxylic acids, any organic acid containing one or more carboxyl (-COOH) groups. carboxylic acid anabolism carboxylic acid biosynthesis carboxylic acid formation carboxylic acid synthesis biological_process GO:0046394 carboxylic acid biosynthetic process GO:0046394 The chemical reactions and pathways resulting in the formation of carboxylic acids, any organic acid containing one or more carboxyl (-COOH) groups. ISBN:0198506732 The chemical reactions and pathways resulting in the formation of membrane lipids, any lipid found in or associated with a biological membrane. membrane lipid anabolism membrane lipid biosynthesis membrane lipid formation membrane lipid synthesis biological_process GO:0046467 membrane lipid biosynthetic process GO:0046467 The chemical reactions and pathways resulting in the formation of membrane lipids, any lipid found in or associated with a biological membrane. GOC:ai The specialization of organization of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light. An example of this process is found in Drosophila melanogaster. GO:0007467 biological_process GO:0046530 photoreceptor cell differentiation GO:0046530 The specialization of organization of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light. An example of this process is found in Drosophila melanogaster. GOC:ai ISBN:0198506732 Any process that modulates the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster. GO:0045673 regulation of photoreceptor differentiation biological_process GO:0046532 regulation of photoreceptor cell differentiation GO:0046532 Any process that modulates the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster. GO:0045674 down regulation of photoreceptor cell differentiation down regulation of photoreceptor differentiation down-regulation of photoreceptor cell differentiation down-regulation of photoreceptor differentiation downregulation of photoreceptor cell differentiation downregulation of photoreceptor differentiation negative regulation of photoreceptor differentiation inhibition of photoreceptor cell differentiation inhibition of photoreceptor differentiation biological_process GO:0046533 negative regulation of photoreceptor cell differentiation GO:0046533 Any process that stops, prevents, or reduces the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster. GOC:go_curators Any process that activates or increases the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster. GO:0045675 positive regulation of photoreceptor differentiation up regulation of photoreceptor cell differentiation up regulation of photoreceptor differentiation up-regulation of photoreceptor cell differentiation up-regulation of photoreceptor differentiation upregulation of photoreceptor cell differentiation upregulation of photoreceptor differentiation activation of photoreceptor cell differentiation activation of photoreceptor differentiation stimulation of photoreceptor cell differentiation stimulation of photoreceptor differentiation biological_process GO:0046534 positive regulation of photoreceptor cell differentiation GO:0046534 Any process that activates or increases the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster. GOC:go_curators The process whose specific outcome is the progression of the primary female sexual characteristics over time, from their formation to the mature structure. The primary female sexual characteristics are the ovaries, and they develop in response to sex hormone secretion. biological_process GO:0046545 development of primary female sexual characteristics GO:0046545 The process whose specific outcome is the progression of the primary female sexual characteristics over time, from their formation to the mature structure. The primary female sexual characteristics are the ovaries, and they develop in response to sex hormone secretion. GOC:ai Development of a rod cell, one of the sensory cells in the eye that reacts to the presence of light. Rod cells contain the photopigment rhodopsin or porphyropsin and are responsible for vision in dim light. biological_process GO:0046548 retinal rod cell development GO:0046548 Development of a rod cell, one of the sensory cells in the eye that reacts to the presence of light. Rod cells contain the photopigment rhodopsin or porphyropsin and are responsible for vision in dim light. ISBN:0198506732 Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision. biological_process GO:0046549 retinal cone cell development GO:0046549 Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision. ISBN:0198506732 Any process that modulates the frequency, rate or extent of growth of an organ of an organism. biological_process GO:0046620 regulation of organ growth GO:0046620 Any process that modulates the frequency, rate or extent of growth of an organ of an organism. GOC:bf GOC:tb Any process that stops, prevents, or reduces the frequency, rate or extent of growth of an organ of an organism. biological_process GO:0046621 negative regulation of organ growth GO:0046621 Any process that stops, prevents, or reduces the frequency, rate or extent of growth of an organ of an organism. GOC:bf GOC:tb Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism. biological_process GO:0046622 positive regulation of organ growth GO:0046622 Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism. GOC:bf GOC:tb A change in morphology and behavior of a lymphocyte resulting from exposure to a specific antigen, mitogen, cytokine, chemokine, cellular ligand, or soluble factor. biological_process GO:0046649 lymphocyte activation GO:0046649 A change in morphology and behavior of a lymphocyte resulting from exposure to a specific antigen, mitogen, cytokine, chemokine, cellular ligand, or soluble factor. GOC:mgi_curators ISBN:0781735149 The expansion of a lymphocyte population by cell division. biological_process GO:0046651 lymphocyte proliferation GO:0046651 The expansion of a lymphocyte population by cell division. GOC:ai The establishment of the sex of a female organism by physical differentiation. biological_process GO:0046660 female sex differentiation GO:0046660 The establishment of the sex of a female organism by physical differentiation. GOC:bf Programmed cell death that occurs in the developing retina. programmed cell death, retina cells programmed cell death, retinal cells retina cell programmed cell death retina programmed cell death retinal programmed cell death biological_process GO:0046666 retinal cell programmed cell death GO:0046666 Programmed cell death that occurs in the developing retina. GOC:bf Programmed cell death that occurs in the retina to remove excess cells between ommatidia, thus resulting in a hexagonal lattice, precise with respect to cell number and position surrounding each ommatidium. biological_process GO:0046667 compound eye retinal cell programmed cell death GO:0046667 Programmed cell death that occurs in the retina to remove excess cells between ommatidia, thus resulting in a hexagonal lattice, precise with respect to cell number and position surrounding each ommatidium. PMID:12006672 Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina. regulation of retinal programmed cell death biological_process GO:0046668 regulation of retinal cell programmed cell death GO:0046668 Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina. GOC:ai GOC:tb regulation of retinal programmed cell death GOC:tb Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the compound eye retina. regulation of retinal cell programmed cell death biological_process GO:0046669 regulation of compound eye retinal cell programmed cell death GO:0046669 Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the compound eye retina. GOC:ai Any process that activates or increases the frequency, rate or extent of programmed cell death that occurs in the retina. positive regulation of retinal programmed cell death up regulation of retinal programmed cell death up-regulation of retinal programmed cell death upregulation of retinal programmed cell death activation of retinal programmed cell death stimulation of retinal programmed cell death biological_process GO:0046670 positive regulation of retinal cell programmed cell death GO:0046670 Any process that activates or increases the frequency, rate or extent of programmed cell death that occurs in the retina. GOC:ai GOC:tb positive regulation of retinal programmed cell death GOC:tb Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death that occurs in the retina. down regulation of retinal programmed cell death down-regulation of retinal programmed cell death downregulation of retinal programmed cell death negative regulation of retinal programmed cell death inhibition of retinal programmed cell death biological_process GO:0046671 negative regulation of retinal cell programmed cell death GO:0046671 Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death that occurs in the retina. GOC:ai GOC:tb negative regulation of retinal programmed cell death GOC:tb Any process that activates or increases the frequency, rate or extent of programmed cell death that occurs in the compound eye retina. activation of retinal cell programmed cell death positive regulation of retinal cell programmed cell death stimulation of retinal cell programmed cell death up regulation of retinal cell programmed cell death up-regulation of retinal cell programmed cell death upregulation of retinal cell programmed cell death biological_process GO:0046672 positive regulation of compound eye retinal cell programmed cell death GO:0046672 Any process that activates or increases the frequency, rate or extent of programmed cell death that occurs in the compound eye retina. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death that occurs in the compound eye retina. down regulation of retinal cell programmed cell death down-regulation of retinal cell programmed cell death downregulation of retinal cell programmed cell death inhibition of retinal cell programmed cell death negative regulation of retina cell programmed cell death negative regulation of retinal cell programmed cell death biological_process GO:0046673 negative regulation of compound eye retinal cell programmed cell death GO:0046673 Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death that occurs in the compound eye retina. GOC:ai Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbamate stimulus. Carbamates are a group of insecticides and parasiticides that act by inhibiting cholinesterase. biological_process carbamate resistance carbamate susceptibility/resistance GO:0046681 response to carbamate GO:0046681 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbamate stimulus. Carbamates are a group of insecticides and parasiticides that act by inhibiting cholinesterase. ISBN:0721662544 The cellular homeostatic process that preserves a muscle cell in a stable functional or structural state. muscle fiber maintenance biological_process muscle homeostasis GO:0046716 muscle cell cellular homeostasis GO:0046716 The cellular homeostatic process that preserves a muscle cell in a stable functional or structural state. GOC:mah PMID:3091429 PMID:7781901 muscle fiber maintenance GOC:dph GOC:tb muscle homeostasis GOC:dph The controlled release of acid by a cell or a tissue. biological_process GO:0046717 acid secretion GO:0046717 The controlled release of acid by a cell or a tissue. GOC:ai The addition of tubulin heterodimers to one or both ends of a microtubule. microtubule assembly biological_process microtubule formation GO:0046785 microtubule polymerization GO:0046785 The addition of tubulin heterodimers to one or both ends of a microtubule. GOC:ai GOC:go_curators Any process that modulates the frequency, rate or extent of the directed movement of substances between the nucleus and the cytoplasm. biological_process GO:0046822 regulation of nucleocytoplasmic transport GO:0046822 Any process that modulates the frequency, rate or extent of the directed movement of substances between the nucleus and the cytoplasm. GOC:bf Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of substances between the cytoplasm and the nucleus. down regulation of nucleocytoplasmic transport down-regulation of nucleocytoplasmic transport downregulation of nucleocytoplasmic transport inhibition of nucleocytoplasmic transport biological_process GO:0046823 negative regulation of nucleocytoplasmic transport GO:0046823 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of substances between the cytoplasm and the nucleus. GOC:bf Any process that activates or increases the frequency, rate or extent of the directed movement of substances between the nucleus and the cytoplasm. up regulation of nucleocytoplasmic transport up-regulation of nucleocytoplasmic transport upregulation of nucleocytoplasmic transport activation of nucleocytoplasmic transport stimulation of nucleocytoplasmic transport biological_process GO:0046824 positive regulation of nucleocytoplasmic transport GO:0046824 Any process that activates or increases the frequency, rate or extent of the directed movement of substances between the nucleus and the cytoplasm. GOC:bf Any process that modulates the frequency, rate or extent of the directed movement of proteins from the nucleus to the cytoplasm. regulation of protein export from cell nucleus regulation of protein export out of nucleus regulation of protein transport from nucleus to cytoplasm regulation of protein-nucleus export biological_process GO:0046825 regulation of protein export from nucleus GO:0046825 Any process that modulates the frequency, rate or extent of the directed movement of proteins from the nucleus to the cytoplasm. GOC:bf Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of proteins from the nucleus into the cytoplasm. down regulation of protein export from nucleus down-regulation of protein export from nucleus downregulation of protein export from nucleus negative regulation of protein export from cell nucleus negative regulation of protein export out of nucleus negative regulation of protein transport from nucleus to cytoplasm negative regulation of protein-nucleus export inhibition of protein export from nucleus biological_process GO:0046826 negative regulation of protein export from nucleus GO:0046826 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of proteins from the nucleus into the cytoplasm. GOC:bf Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm. positive regulation of protein export from cell nucleus positive regulation of protein export out of nucleus positive regulation of protein transport from nucleus to cytoplasm positive regulation of protein-nucleus export up regulation of protein export from nucleus up-regulation of protein export from nucleus upregulation of protein export from nucleus activation of protein export from nucleus stimulation of protein export from nucleus biological_process GO:0046827 positive regulation of protein export from nucleus GO:0046827 Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm. GOC:bf Any process that modulates the frequency, rate or extent of movement of RNA from the cytoplasm to the nucleus. regulation of RNA import into cell nucleus regulation of RNA transport from cytoplasm to nucleus regulation of RNA-nucleus import biological_process GO:0046828 regulation of RNA import into nucleus GO:0046828 Any process that modulates the frequency, rate or extent of movement of RNA from the cytoplasm to the nucleus. GOC:bf Any process that stops, prevents, or reduces the frequency, rate or extent of the movement of RNA from the cytoplasm into the nucleus. down regulation of RNA import into nucleus down-regulation of RNA import into nucleus downregulation of RNA import into nucleus negative regulation of RNA import into cell nucleus negative regulation of RNA transport from cytoplasm to nucleus negative regulation of RNA-nucleus import inhibition of RNA import into nucleus biological_process GO:0046829 negative regulation of RNA import into nucleus GO:0046829 Any process that stops, prevents, or reduces the frequency, rate or extent of the movement of RNA from the cytoplasm into the nucleus. GOC:bf Any process that activates or increases the frequency, rate or extent of movement of RNA from the cytoplasm into the nucleus. positive regulation of RNA import into cell nucleus positive regulation of RNA transport from cytoplasm to nucleus positive regulation of RNA-nucleus import up regulation of RNA import into nucleus up-regulation of RNA import into nucleus upregulation of RNA import into nucleus activation of RNA import into nucleus stimulation of RNA import into nucleus biological_process GO:0046830 positive regulation of RNA import into nucleus GO:0046830 Any process that activates or increases the frequency, rate or extent of movement of RNA from the cytoplasm into the nucleus. GOC:bf Any process that modulates the frequency, rate or extent of the directed movement of RNA from the nucleus to the cytoplasm. regulation of RNA export from cell nucleus regulation of RNA export out of nucleus regulation of RNA transport from nucleus to cytoplasm regulation of RNA-nucleus export biological_process GO:0046831 regulation of RNA export from nucleus GO:0046831 Any process that modulates the frequency, rate or extent of the directed movement of RNA from the nucleus to the cytoplasm. GOC:bf Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of RNA from the nucleus into the cytoplasm. down regulation of RNA export from nucleus down-regulation of RNA export from nucleus downregulation of RNA export from nucleus negative regulation of RNA export from cell nucleus negative regulation of RNA export out of nucleus negative regulation of RNA transport from nucleus to cytoplasm negative regulation of RNA-nucleus export inhibition of RNA export from nucleus biological_process GO:0046832 negative regulation of RNA export from nucleus GO:0046832 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of RNA from the nucleus into the cytoplasm. GOC:bf Any process that activates or increases the frequency, rate or extent of directed movement of RNA from the nucleus into the cytoplasm. positive regulation of RNA export from cell nucleus positive regulation of RNA export out of nucleus positive regulation of RNA transport from nucleus to cytoplasm positive regulation of RNA-nucleus export up regulation of RNA export from nucleus up-regulation of RNA export from nucleus upregulation of RNA export from nucleus activation of RNA export from nucleus stimulation of RNA export from nucleus biological_process GO:0046833 positive regulation of RNA export from nucleus GO:0046833 Any process that activates or increases the frequency, rate or extent of directed movement of RNA from the nucleus into the cytoplasm. GOC:bf The regulated release of hormones, substances with a specific regulatory effect on a particular organ or group of cells. biological_process GO:0046879 hormone secretion GO:0046879 The regulated release of hormones, substances with a specific regulatory effect on a particular organ or group of cells. ISBN:0198506732 Any process that modulates the frequency, rate or extent of the regulated release of a hormone from a cell. biological_process GO:0046883 regulation of hormone secretion GO:0046883 Any process that modulates the frequency, rate or extent of the regulated release of a hormone from a cell. GOC:ai Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell. up regulation of hormone secretion up-regulation of hormone secretion upregulation of hormone secretion activation of hormone secretion stimulation of hormone secretion biological_process GO:0046887 positive regulation of hormone secretion GO:0046887 Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a hormone from a cell. down regulation of hormone secretion down-regulation of hormone secretion downregulation of hormone secretion inhibition of hormone secretion biological_process GO:0046888 negative regulation of hormone secretion GO:0046888 Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a hormone from a cell. GOC:ai Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids. positive regulation of lipid anabolism positive regulation of lipid biosynthesis positive regulation of lipid formation positive regulation of lipid synthesis positive regulation of lipogenesis up regulation of lipid biosynthetic process up-regulation of lipid biosynthetic process upregulation of lipid biosynthetic process activation of lipid biosynthetic process stimulation of lipid biosynthetic process biological_process GO:0046889 positive regulation of lipid biosynthetic process GO:0046889 Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids. GOC:ai positive regulation of lipogenesis GOC:sl Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids. regulation of lipid anabolism regulation of lipid biosynthesis regulation of lipid formation regulation of lipid synthesis regulation of lipogenesis biological_process GO:0046890 regulation of lipid biosynthetic process GO:0046890 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids. GOC:ai regulation of lipogenesis GOC:sl The controlled release of a substance by a cell or a tissue. biological_process GO:0046903 secretion GO:0046903 The controlled release of a substance by a cell or a tissue. GOC:ai The directed movement of substances within a cell. jl 2013-12-18T14:04:50Z GO:1902582 biological_process single organism intracellular transport single-organism intracellular transport GO:0046907 intracellular transport GO:0046907 The directed movement of substances within a cell. GOC:ai single organism intracellular transport GOC:TermGenie Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell. biological_process GO:0046928 regulation of neurotransmitter secretion GO:0046928 Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a neurotransmitter. down regulation of neurotransmitter secretion down-regulation of neurotransmitter secretion downregulation of neurotransmitter secretion conotoxin activity inhibition of neurotransmitter secretion biological_process GO:0046929 negative regulation of neurotransmitter secretion GO:0046929 Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a neurotransmitter. GOC:ai The directed movement of carboxylic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carboxylic acids are organic acids containing one or more carboxyl (COOH) groups or anions (COO-). biological_process GO:0046942 carboxylic acid transport GO:0046942 The directed movement of carboxylic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carboxylic acids are organic acids containing one or more carboxyl (COOH) groups or anions (COO-). GOC:ai The directed movement of a vesicle along a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination. microtubule-based vesicle localization biological_process GO:0047496 vesicle transport along microtubule GO:0047496 The directed movement of a vesicle along a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination. GOC:ecd GOC:rl microtubule-based vesicle localization GOC:rl The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. biological_process GO:0048048 embryonic eye morphogenesis GO:0048048 The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. GOC:jid The developmental process that results in the deposition of coloring matter in an organism, tissue or cell. biological_process pigmentation during development GO:0048066 developmental pigmentation GO:0048066 The developmental process that results in the deposition of coloring matter in an organism, tissue or cell. ISBN:0582227089 Any process that modulates the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism. regulation of pigmentation during development biological_process GO:0048070 regulation of developmental pigmentation GO:0048070 Any process that modulates the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism. GOC:dph GOC:jid GOC:tb regulation of pigmentation during development GOC:dph GOC:tb Any process that decreases the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism. down regulation of developmental pigmentation down-regulation of developmental pigmentation downregulation of developmental pigmentation inhibition of pigmentation biological_process GO:0048086 negative regulation of developmental pigmentation GO:0048086 Any process that decreases the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism. GOC:dph GOC:jid GOC:tb down regulation of developmental pigmentation GOC:dph GOC:tb down-regulation of developmental pigmentation GOC:dph GOC:tb downregulation of developmental pigmentation GOC:dph GOC:tb Any process that increases the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism. up regulation of developmental pigmentation up-regulation of developmental pigmentation upregulation of developmental pigmentation activation of developmental pigmentation stimulation of developmental pigmentation biological_process GO:0048087 positive regulation of developmental pigmentation GO:0048087 Any process that increases the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism. GOC:dph GOC:jid GOC:tb up regulation of developmental pigmentation GOC:dph up-regulation of developmental pigmentation GOC:dph GOC:tb upregulation of developmental pigmentation GOC:dph GOC:tb activation of developmental pigmentation GOC:dph GOC:tb stimulation of developmental pigmentation GOC:dph GOC:tb The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line. somatic stem cell renewal biological_process GO:0048103 somatic stem cell division GO:0048103 The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line. GOC:jid ISBN:0582227089 The self-renewing division of a germline stem cell in the female gonad, to produce a daughter stem cell and a daughter germ cell, which will divide to form the female gametes. GO:0048141 female germ-line stem cell renewal biological_process GO:0048132 female germ-line stem cell asymmetric division GO:0048132 The self-renewing division of a germline stem cell in the female gonad, to produce a daughter stem cell and a daughter germ cell, which will divide to form the female gametes. GOC:jid GOC:mtg_sensu The multiplication or reproduction of fibroblast cells, resulting in the expansion of the fibroblast population. biological_process GO:0048144 fibroblast proliferation GO:0048144 The multiplication or reproduction of fibroblast cells, resulting in the expansion of the fibroblast population. GOC:jid Any process that modulates the frequency, rate or extent of multiplication or reproduction of fibroblast cells. biological_process GO:0048145 regulation of fibroblast proliferation GO:0048145 Any process that modulates the frequency, rate or extent of multiplication or reproduction of fibroblast cells. GOC:jid Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells. up regulation of fibroblast proliferation up-regulation of fibroblast proliferation upregulation of fibroblast proliferation activation of fibroblast proliferation stimulation of fibroblast proliferation biological_process GO:0048146 positive regulation of fibroblast proliferation GO:0048146 Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells. GOC:jid Any process that stops, prevents, or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells. down regulation of fibroblast proliferation down-regulation of fibroblast proliferation downregulation of fibroblast proliferation inhibition of fibroblast proliferation biological_process GO:0048147 negative regulation of fibroblast proliferation GO:0048147 Any process that stops, prevents, or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells. GOC:jid The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles. biological_process Golgi-derived vesicle transport GO:0048193 Golgi vesicle transport GO:0048193 The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles. GOC:jid ISBN:0716731363 PMID:10219233 The process in which vesicles are directed to specific destination membranes during transport to, from or within the Golgi apparatus; mediated by the addition of specific coat proteins, including COPI and COPII proteins and clathrin, to the membrane during vesicle formation. Golgi vesicle targeting dictyosome vesicle targeting vesicle targeting, to, from or within dictyosome biological_process GO:0048199 vesicle targeting, to, from or within Golgi GO:0048199 The process in which vesicles are directed to specific destination membranes during transport to, from or within the Golgi apparatus; mediated by the addition of specific coat proteins, including COPI and COPII proteins and clathrin, to the membrane during vesicle formation. GOC:jid GOC:mah ISBN:0716731363 PMID:10219233 Any process that modulates the frequency, rate, or destination of vesicle-mediated transport to, from or within the Golgi apparatus. regulation of Golgi vesicle targeting biological_process GO:0048209 regulation of vesicle targeting, to, from or within Golgi GO:0048209 Any process that modulates the frequency, rate, or destination of vesicle-mediated transport to, from or within the Golgi apparatus. GOC:jid GOC:mah ISBN:0716731363 PMID:10219233 The regulated release of norepinephrine by a cell. Norepinephrine is a catecholamine and it acts as a hormone and as a neurotransmitter of most of the sympathetic nervous system. noradrenaline secretion biological_process GO:0048243 norepinephrine secretion GO:0048243 The regulated release of norepinephrine by a cell. Norepinephrine is a catecholamine and it acts as a hormone and as a neurotransmitter of most of the sympathetic nervous system. GOC:ef GOC:jid Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching. elastic fibre assembly elastin fiber assembly elastin fibre assembly biological_process GO:0048251 elastic fiber assembly GO:0048251 Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching. GOC:jid PMID:10841810 PMID:12615674 elastin fiber assembly GOC:BHF elastin fibre assembly GOC:BHF The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi. biological_process GO:0048280 vesicle fusion with Golgi apparatus GO:0048280 The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi. GOC:jid The creation of a single organelle from two or more organelles. biological_process GO:0048284 organelle fusion GO:0048284 The creation of a single organelle from two or more organelles. GOC:jid The creation of two or more organelles by division of one organelle. biological_process GO:0048285 organelle fission GO:0048285 The creation of two or more organelles by division of one organelle. GOC:jid The joining of 2 or more lipid bilayer membranes that surround the nucleus during the creation of a single nucleus from multiple nuclei. biological_process nuclear membrane fusion during karyogamy GO:0048288 nuclear membrane fusion involved in karyogamy GO:0048288 The joining of 2 or more lipid bilayer membranes that surround the nucleus during the creation of a single nucleus from multiple nuclei. GOC:jid nuclear membrane fusion during karyogamy GOC:dph GOC:tb The partitioning of organelles between daughter cells at cell division. biological_process GO:0048308 organelle inheritance GO:0048308 The partitioning of organelles between daughter cells at cell division. GOC:jid The partitioning of Golgi apparatus between daughter cells at cell division. Reactome:R-HSA-162658 Golgi apparatus inheritance Golgi division Golgi partitioning biological_process GO:0048313 Golgi inheritance GO:0048313 The partitioning of Golgi apparatus between daughter cells at cell division. GOC:jid PMID:12851069 Reactome:R-HSA-162658 Golgi Cisternae Pericentriolar Stack Reorganization Golgi division GOC:ascb_2009 GOC:dph GOC:tb The process whose specific outcome is the progression of the axial mesoderm over time, from its formation to the mature structure. The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord. biological_process GO:0048318 axial mesoderm development GO:0048318 The process whose specific outcome is the progression of the axial mesoderm over time, from its formation to the mature structure. The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord. GOC:dgh The process in which the anatomical structures of the axial mesoderm are generated and organized. biological_process GO:0048319 axial mesoderm morphogenesis GO:0048319 The process in which the anatomical structures of the axial mesoderm are generated and organized. GOC:go_curators The process that gives rise to the axial mesoderm. This process pertains to the initial formation of the structure from unspecified parts. Reactome:R-HSA-9796292 biological_process GO:0048320 axial mesoderm formation GO:0048320 The process that gives rise to the axial mesoderm. This process pertains to the initial formation of the structure from unspecified parts. GOC:dgh Reactome:R-HSA-9796292 Formation of axial mesoderm The process in which the anatomical structures of the mesoderm are generated and organized. biological_process GO:0048332 mesoderm morphogenesis GO:0048332 The process in which the anatomical structures of the mesoderm are generated and organized. GOC:go_curators The process in which a relatively unspecialized cell acquires the specialized features of a mesoderm cell. mesoderm cell differentiation biological_process GO:0048333 mesodermal cell differentiation GO:0048333 The process in which a relatively unspecialized cell acquires the specialized features of a mesoderm cell. GOC:dgh The process whose specific outcome is the progression of the paraxial mesoderm over time, from its formation to the mature structure. The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube. biological_process GO:0048339 paraxial mesoderm development GO:0048339 The process whose specific outcome is the progression of the paraxial mesoderm over time, from its formation to the mature structure. The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube. GOC:dgh The process in which the anatomical structures of the paraxial mesoderm are generated and organized. biological_process GO:0048340 paraxial mesoderm morphogenesis GO:0048340 The process in which the anatomical structures of the paraxial mesoderm are generated and organized. GOC:go_curators The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts. Reactome:R-HSA-9793380 biological_process GO:0048341 paraxial mesoderm formation GO:0048341 The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts. GOC:dgh Reactome:R-HSA-9793380 Formation of paraxial mesoderm The process whose specific outcome is the progression of the lateral mesoderm over time, from its formation to the mature structure. lateral plate mesoderm development biological_process GO:0048368 lateral mesoderm development GO:0048368 The process whose specific outcome is the progression of the lateral mesoderm over time, from its formation to the mature structure. GOC:go_curators The process in which the anatomical structures of the lateral mesoderm are generated and organized. lateral plate mesoderm morphogenesis biological_process GO:0048369 lateral mesoderm morphogenesis GO:0048369 The process in which the anatomical structures of the lateral mesoderm are generated and organized. GOC:go_curators The process that gives rise to the lateral mesoderm. This process pertains to the initial formation of the structure from unspecified parts. Reactome:R-HSA-9758920 lateral plate mesoderm biosynthesis lateral plate mesoderm formation biological_process GO:0048370 lateral mesoderm formation GO:0048370 The process that gives rise to the lateral mesoderm. This process pertains to the initial formation of the structure from unspecified parts. GOC:jid Reactome:R-HSA-9758920 Formation of lateral plate mesoderm The process whose specific outcome is the progression of the intermediate mesoderm over time, from its formation to the mature structure. The intermediate mesoderm is located between the lateral mesoderm and the paraxial mesoderm. It develops into the kidney and gonads. biological_process GO:0048389 intermediate mesoderm development GO:0048389 The process whose specific outcome is the progression of the intermediate mesoderm over time, from its formation to the mature structure. The intermediate mesoderm is located between the lateral mesoderm and the paraxial mesoderm. It develops into the kidney and gonads. GOC:dgh The process in which the anatomical structures of the intermediate mesoderm are generated and organized. biological_process GO:0048390 intermediate mesoderm morphogenesis GO:0048390 The process in which the anatomical structures of the intermediate mesoderm are generated and organized. GOC:go_curators The process that gives rise to the intermediate mesoderm. This process pertains to the initial formation of the structure from unspecified parts. Reactome:R-HSA-9761174 biological_process GO:0048391 intermediate mesoderm formation GO:0048391 The process that gives rise to the intermediate mesoderm. This process pertains to the initial formation of the structure from unspecified parts. GOC:dgh Reactome:R-HSA-9761174 Formation of intermediate mesoderm The cellular developmental process in which a specific cell progresses from an immature to a mature state. Cell development start once cell commitment has taken place. biological_process terminal differentiation GO:0048468 cell development GO:0048468 The cellular developmental process in which a specific cell progresses from an immature to a mature state. Cell development start once cell commitment has taken place. GOC:go_curators terminal differentiation GOC:dph GOC:tb The cellular developmental process, independent of morphogenetic (shape) change, that is required for a specific cell to attain its fully functional state. biological_process functional differentiation GO:0048469 cell maturation GO:0048469 The cellular developmental process, independent of morphogenetic (shape) change, that is required for a specific cell to attain its fully functional state. GOC:go_curators functional differentiation GOC:dph The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell. Examples of this process are found in Mus musculus and Drosophila melanogaster. GO:0009993 GO:0048157 Wikipedia:Oogenesis biological_process GO:0048477 oogenesis GO:0048477 The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell. Examples of this process are found in Mus musculus and Drosophila melanogaster. GOC:kmv GOC:mtg_sensu GOC:pr The process whose specific outcome is the progression of the autonomic nervous system over time, from its formation to the mature structure. The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands. biological_process GO:0048483 autonomic nervous system development GO:0048483 The process whose specific outcome is the progression of the autonomic nervous system over time, from its formation to the mature structure. The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands. FMA:9905 GOC:jid GOC:sr The process whose specific outcome is the progression of the sympathetic nervous system over time, from its formation to the mature structure. The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter. biological_process GO:0048485 sympathetic nervous system development GO:0048485 The process whose specific outcome is the progression of the sympathetic nervous system over time, from its formation to the mature structure. The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter. FMA:9906 GOC:jid GOC:sr The process whose specific outcome is the progression of the parasympathetic nervous system over time, from its formation to the mature structure. The parasympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia. biological_process GO:0048486 parasympathetic nervous system development GO:0048486 The process whose specific outcome is the progression of the parasympathetic nervous system over time, from its formation to the mature structure. The parasympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia. FMA:9907 GOC:jid GOC:sr The process controlling the activation and/or rate at which relatively unspecialized cells acquire specialized features. Any process that modulates the rate, frequency or extent of the XXX at a consistent predetermined time point during its development. biological_process timing of cell differentiation GO:0048505 regulation of timing of cell differentiation GO:0048505 The process controlling the activation and/or rate at which relatively unspecialized cells acquire specialized features. Any process that modulates the rate, frequency or extent of the XXX at a consistent predetermined time point during its development. GOC:bf GOC:dph GOC:jid GOC:tb Development of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. Wikipedia:Organogenesis development of an organ organogenesis biological_process GO:0048513 animal organ development GO:0048513 Development of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. GOC:dph GOC:jid The process in which the anatomical structures of blood vessels are generated and organized. The blood vessel is the vasculature carrying blood. biological_process GO:0048514 blood vessel morphogenesis GO:0048514 The process in which the anatomical structures of blood vessels are generated and organized. The blood vessel is the vasculature carrying blood. GOC:jid Any process that activates or increases the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule. GO:0043119 positive regulation of physiological process up regulation of biological process up-regulation of biological process upregulation of biological process activation of biological process stimulation of biological process biological_process GO:0048518 positive regulation of biological process GO:0048518 Any process that activates or increases the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule. GOC:jid Any process that stops, prevents, or reduces the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule. GO:0043118 down regulation of biological process down-regulation of biological process downregulation of biological process negative regulation of physiological process inhibition of biological process biological_process GO:0048519 negative regulation of biological process GO:0048519 Any process that stops, prevents, or reduces the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule. GOC:jid Any process that activates or increases the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli. up regulation of behavior up-regulation of behavior upregulation of behavior activation of behavior stimulation of behavior biological_process GO:0048520 positive regulation of behavior GO:0048520 Any process that activates or increases the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli. GOC:jid GOC:pr Any process that stops, prevents, or reduces the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli. down regulation of behavior down-regulation of behavior downregulation of behavior inhibition of behavior biological_process GO:0048521 negative regulation of behavior GO:0048521 Any process that stops, prevents, or reduces the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli. GOC:jid GOC:pr Any process that activates or increases the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level. GO:0051242 positive regulation of cellular physiological process up regulation of cellular process up-regulation of cellular process upregulation of cellular process activation of cellular process stimulation of cellular process biological_process GO:0048522 positive regulation of cellular process GO:0048522 Any process that activates or increases the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level. GOC:jid Any process that stops, prevents, or reduces the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level. GO:0051243 down regulation of cellular process down-regulation of cellular process downregulation of cellular process negative regulation of cellular physiological process inhibition of cellular process biological_process GO:0048523 negative regulation of cellular process GO:0048523 Any process that stops, prevents, or reduces the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level. GOC:jid The process whose specific outcome is the progression of any organ involved in hematopoiesis (also known as hemopoiesis) or lymphoid cell activation over time, from its formation to the mature structure. Such development includes differentiation of resident cell types (stromal cells) and of migratory cell types dependent on the unique microenvironment afforded by the organ for their proper differentiation. haematopoietic or lymphoid organ development haemopoietic or lymphoid organ development hemopoietic or lymphoid organ development biological_process GO:0048534 hematopoietic or lymphoid organ development GO:0048534 The process whose specific outcome is the progression of any organ involved in hematopoiesis (also known as hemopoiesis) or lymphoid cell activation over time, from its formation to the mature structure. Such development includes differentiation of resident cell types (stromal cells) and of migratory cell types dependent on the unique microenvironment afforded by the organ for their proper differentiation. GOC:add GOC:rl ISBN:0781735149 The process whose specific outcome is the progression of the bone marrow over time, from its formation to the mature structure. biological_process GO:0048539 bone marrow development GO:0048539 The process whose specific outcome is the progression of the bone marrow over time, from its formation to the mature structure. GOC:add ISBN:0781735149 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus. response to steroid hormone stimulus biological_process GO:0048545 response to steroid hormone GO:0048545 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus. GOC:go_curators response to steroid hormone stimulus GOC:dos The process in which the anatomical structures of the digestive tract are generated and organized. The digestive tract is the anatomical structure through which food passes and is processed. GO:0048547 gut morphogenesis alimentary canal morphogenesis digestive tube morphogenesis gastrointestinal tract morphogenesis intestinal morphogenesis biological_process GO:0048546 digestive tract morphogenesis GO:0048546 The process in which the anatomical structures of the digestive tract are generated and organized. The digestive tract is the anatomical structure through which food passes and is processed. GOC:dph GOC:go_curators PMID:12618131 gut morphogenesis GOC:dph Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. biological_process GO:0048562 embryonic organ morphogenesis GO:0048562 Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. GOC:jid The process whose specific outcome is the progression of the digestive tract over time, from its formation to the mature structure. The digestive tract is the anatomical structure through which food passes and is processed. gut development intestinal development intestine development biological_process GO:0048565 digestive tract development GO:0048565 The process whose specific outcome is the progression of the digestive tract over time, from its formation to the mature structure. The digestive tract is the anatomical structure through which food passes and is processed. GOC:go_curators gut development GOC:dph Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. embryonic organogenesis biological_process GO:0048568 embryonic organ development GO:0048568 Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. GOC:jid The process in which the anatomical structures of the notochord are generated and organized. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column. biological_process GO:0048570 notochord morphogenesis GO:0048570 The process in which the anatomical structures of the notochord are generated and organized. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column. GOC:jid Any process that modulates the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. biological_process GO:0048580 regulation of post-embryonic development GO:0048580 Any process that modulates the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. GOC:jid Any process that stops, prevents, or reduces the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. down regulation of post-embryonic development down-regulation of post-embryonic development downregulation of post-embryonic development inhibition of post-embryonic development biological_process GO:0048581 negative regulation of post-embryonic development GO:0048581 Any process that stops, prevents, or reduces the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. GOC:jid Any process that activates or increases the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. up regulation of post-embryonic development up-regulation of post-embryonic development upregulation of post-embryonic development activation of post-embryonic development stimulation of post-embryonic development biological_process GO:0048582 positive regulation of post-embryonic development GO:0048582 Any process that activates or increases the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. GOC:jid Any process that modulates the frequency, rate or extent of a response to a stimulus. Response to stimulus is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. biological_process GO:0048583 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. regulation of response to stimulus GO:0048583 Any process that modulates the frequency, rate or extent of a response to a stimulus. Response to stimulus is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. GOC:jid Any process that activates, maintains or increases the rate of a response to a stimulus. Response to stimulus is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. up regulation of response to stimulus up-regulation of response to stimulus upregulation of response to stimulus activation of response to stimulus stimulation of response to stimulus biological_process GO:0048584 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. positive regulation of response to stimulus GO:0048584 Any process that activates, maintains or increases the rate of a response to a stimulus. Response to stimulus is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. GOC:jid Any process that stops, prevents, or reduces the frequency, rate or extent of a response to a stimulus. Response to stimulus is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. down regulation of response to stimulus down-regulation of response to stimulus downregulation of response to stimulus inhibition of response to stimulus biological_process GO:0048585 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. negative regulation of response to stimulus GO:0048585 Any process that stops, prevents, or reduces the frequency, rate or extent of a response to a stimulus. Response to stimulus is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. GOC:jid The growth of a cell, where growth contributes to the progression of the cell over time from one condition to another. developmental growth of a unicellular organism biological_process GO:0048588 developmental cell growth GO:0048588 The growth of a cell, where growth contributes to the progression of the cell over time from one condition to another. GOC:go_curators GOC:isa_complete The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another. biological_process GO:0048589 developmental growth GO:0048589 The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another. GOC:go_curators The process in which the anatomical structures of the eye are generated and organized. GO:0048748 biological_process GO:0048592 eye morphogenesis GO:0048592 The process in which the anatomical structures of the eye are generated and organized. GOC:jid GOC:mtg_sensu The process in which the anatomical structures of the eye are generated and organized. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field. GO:0048594 GO:0048595 camera-style eye morphogenesis biological_process GO:0048593 camera-type eye morphogenesis GO:0048593 The process in which the anatomical structures of the eye are generated and organized. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field. GOC:jid GOC:mtg_sensu camera-style eye morphogenesis GOC:dph The process in which the anatomical structures of the eye are generated and organized during embryonic development. embryonic eye morphogenesis biological_process GO:0048596 embryonic camera-type eye morphogenesis GO:0048596 The process in which the anatomical structures of the eye are generated and organized during embryonic development. GOC:jid GOC:mtg_sensu The process in which anatomical structures are generated and organized during the embryonic phase. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants. GO:0048828 embryonic anatomical structure morphogenesis biological_process GO:0048598 embryonic morphogenesis GO:0048598 The process in which anatomical structures are generated and organized during the embryonic phase. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants. GOC:jid GOC:mtg_sensu embryonic anatomical structure morphogenesis GOC:dph GOC:tb The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. biological_process GO:0048599 oocyte development GO:0048599 The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. GOC:go_curators The process in which the structures of an oocyte are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of an oocyte. oocyte morphogenesis during differentiation biological_process GO:0048601 oocyte morphogenesis GO:0048601 The process in which the structures of an oocyte are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of an oocyte. GOC:go_curators The reproductive developmental process whose specific outcome is the progression of somatic structures that will be used in the process of creating new individuals from one or more parents, from their formation to the mature structures. biological_process GO:0048608 reproductive structure development GO:0048608 The reproductive developmental process whose specific outcome is the progression of somatic structures that will be used in the process of creating new individuals from one or more parents, from their formation to the mature structures. GOC:dph GOC:isa_complete GOC:jid The process, occurring above the cellular level, that is pertinent to the reproductive function of a multicellular organism. This includes the integrated processes at the level of tissues and organs. organismal reproductive process Reactome:R-HSA-1474165 reproductive process in a multicellular organism biological_process GO:0048609 multicellular organismal reproductive process GO:0048609 The process, occurring above the cellular level, that is pertinent to the reproductive function of a multicellular organism. This includes the integrated processes at the level of tissues and organs. GOC:dph GOC:jid GOC:tb Reactome:R-HSA-1474165 Reproduction The process whose specific outcome is the progression of the myoblast over time, from its formation to the mature structure. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. biological_process GO:0048627 myoblast development GO:0048627 The process whose specific outcome is the progression of the myoblast over time, from its formation to the mature structure. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. CL:0000056 GOC:dph GOC:mtg_muscle A developmental process, independent of morphogenetic (shape) change, that is required for a myoblast to attain its fully functional state. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. biological_process GO:0048628 myoblast maturation GO:0048628 A developmental process, independent of morphogenetic (shape) change, that is required for a myoblast to attain its fully functional state. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. CL:0000056 GOC:dph GOC:mtg_muscle The increase in size or mass of a skeletal muscle. This may be due to a change in the fiber number or size. biological_process GO:0048630 skeletal muscle tissue growth GO:0048630 The increase in size or mass of a skeletal muscle. This may be due to a change in the fiber number or size. GOC:lm PMID:15726494 PMID:15907921 Any process that modulates the frequency, rate or extent of skeletal muscle growth. biological_process GO:0048631 regulation of skeletal muscle tissue growth GO:0048631 Any process that modulates the frequency, rate or extent of skeletal muscle growth. GOC:lm PMID:15726494 PMID:15907921 Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle growth. down regulation of skeletal muscle growth down-regulation of skeletal muscle growth downregulation of skeletal muscle growth inhibition of skeletal muscle growth biological_process GO:0048632 negative regulation of skeletal muscle tissue growth GO:0048632 Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle growth. GOC:lm PMID:15726494 PMID:15907921 Any process that activates, maintains or increases the rate of skeletal muscle growth. up regulation of skeletal muscle growth up-regulation of skeletal muscle growth upregulation of skeletal muscle growth activation of skeletal muscle growth stimulation of skeletal muscle growth biological_process GO:0048633 positive regulation of skeletal muscle tissue growth GO:0048633 Any process that activates, maintains or increases the rate of skeletal muscle growth. GOC:lm PMID:15726494 PMID:15907921 Any process that modulates the frequency, rate or extent of muscle development. biological_process GO:0048634 regulation of muscle organ development GO:0048634 Any process that modulates the frequency, rate or extent of muscle development. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of muscle development. down regulation of muscle development down-regulation of muscle development downregulation of muscle development inhibition of muscle development biological_process GO:0048635 negative regulation of muscle organ development GO:0048635 Any process that stops, prevents, or reduces the frequency, rate or extent of muscle development. GOC:go_curators Any process that activates, maintains or increases the rate of muscle development. up regulation of muscle development up-regulation of muscle development upregulation of muscle development activation of muscle development stimulation of muscle development biological_process GO:0048636 positive regulation of muscle organ development GO:0048636 Any process that activates, maintains or increases the rate of muscle development. GOC:go_curators Any process that modulates the frequency, rate or extent of developmental growth. biological_process GO:0048638 regulation of developmental growth GO:0048638 Any process that modulates the frequency, rate or extent of developmental growth. GOC:go_curators Any process that activates, maintains or increases the rate of developmental growth. up regulation of developmental growth up-regulation of developmental growth upregulation of developmental growth activation of developmental growth stimulation of developmental growth biological_process GO:0048639 positive regulation of developmental growth GO:0048639 Any process that activates, maintains or increases the rate of developmental growth. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of developmental growth. down regulation of developmental growth down-regulation of developmental growth downregulation of developmental growth inhibition of developmental growth biological_process GO:0048640 negative regulation of developmental growth GO:0048640 Any process that stops, prevents, or reduces the frequency, rate or extent of developmental growth. GOC:go_curators Any process that modulates the frequency, rate or extent of skeletal muscle tissue development. biological_process GO:0048641 regulation of skeletal muscle tissue development GO:0048641 Any process that modulates the frequency, rate or extent of skeletal muscle tissue development. GOC:go_curators Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle tissue development. down regulation of skeletal muscle development down-regulation of skeletal muscle development downregulation of skeletal muscle development inhibition of skeletal muscle development biological_process GO:0048642 negative regulation of skeletal muscle tissue development GO:0048642 Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle tissue development. GOC:go_curators Any process that activates, maintains or increases the rate of skeletal muscle tissue development. up regulation of skeletal muscle development up-regulation of skeletal muscle development upregulation of skeletal muscle development activation of skeletal muscle development stimulation of skeletal muscle development biological_process GO:0048643 positive regulation of skeletal muscle tissue development GO:0048643 Any process that activates, maintains or increases the rate of skeletal muscle tissue development. GOC:go_curators The process in which the anatomical structures of muscle are generated and organized. biological_process GO:0048644 muscle organ morphogenesis GO:0048644 The process in which the anatomical structures of muscle are generated and organized. GOC:jid The process pertaining to the initial formation of an animal organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. Organs are a natural part or structure in an animal or a plant, capable of performing some special action (termed its function), which is essential to the life or well-being of the whole. The heart and lungs are organs of animals, and the petal and leaf are organs of plants. In animals the organs are generally made up of several tissues, one of which usually predominates, and determines the principal function of the organ. animal organ primordium initiation initiation of an animal organ primordium biological_process GO:0048645 animal organ formation GO:0048645 The process pertaining to the initial formation of an animal organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. Organs are a natural part or structure in an animal or a plant, capable of performing some special action (termed its function), which is essential to the life or well-being of the whole. The heart and lungs are organs of animals, and the petal and leaf are organs of plants. In animals the organs are generally made up of several tissues, one of which usually predominates, and determines the principal function of the organ. GOC:dph GOC:jid The developmental process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome. formation of an anatomical structure involved in morphogenesis biological_process GO:0048646 Note that, for example, the formation of a pseudopod in an amoeba would not be considered formation involved in morphogenesis because it would not be thought of as the formation of an anatomical structure that was part of the shaping of the amoeba during its development. The formation of an axon from a neuron would be considered the formation of an anatomical structure involved in morphogenesis because it contributes to the creation of the form of the neuron in a developmental sense. anatomical structure formation involved in morphogenesis GO:0048646 The developmental process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome. GOC:dph GOC:jid GOC:tb formation of an anatomical structure involved in morphogenesis GOC:dph GOC:tb The multiplication or reproduction of smooth muscle cells, resulting in the expansion of a cell population. SMC proliferation biological_process GO:0048659 smooth muscle cell proliferation GO:0048659 The multiplication or reproduction of smooth muscle cells, resulting in the expansion of a cell population. CL:0000192 GOC:ebc PMID:1840698 Any process that modulates the frequency, rate or extent of smooth muscle cell proliferation. regulation of SMC proliferation biological_process GO:0048660 regulation of smooth muscle cell proliferation GO:0048660 Any process that modulates the frequency, rate or extent of smooth muscle cell proliferation. CL:0000192 GOC:ebc Any process that activates or increases the rate or extent of smooth muscle cell proliferation. positive regulation of SMC proliferation up regulation of smooth muscle cell proliferation up-regulation of smooth muscle cell proliferation upregulation of smooth muscle cell proliferation activation of smooth muscle cell proliferation stimulation of smooth muscle cell proliferation biological_process GO:0048661 positive regulation of smooth muscle cell proliferation GO:0048661 Any process that activates or increases the rate or extent of smooth muscle cell proliferation. CL:0000192 GOC:ebc Any process that stops, prevents or reduces the rate or extent of smooth muscle cell proliferation. down regulation of smooth muscle cell proliferation down-regulation of smooth muscle cell proliferation downregulation of smooth muscle cell proliferation negative regulation of SMC proliferation inhibition of smooth muscle cell proliferation biological_process GO:0048662 negative regulation of smooth muscle cell proliferation GO:0048662 Any process that stops, prevents or reduces the rate or extent of smooth muscle cell proliferation. CL:0000192 GOC:ebc The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. biological_process GO:0048666 neuron development GO:0048666 The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. GOC:dph The process in which the structures of a neuron are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a neuron. neuron morphogenesis involved in differentiation biological_process GO:0048667 cell morphogenesis involved in neuron differentiation GO:0048667 The process in which the structures of a neuron are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a neuron. GOC:dph GOC:tb neuron morphogenesis involved in differentiation GOC:dph GOC:tb The process in which nerve cells are generated. This includes the production of neuroblasts and their differentiation into neurons. neuron generation biological_process GO:0048699 generation of neurons GO:0048699 The process in which nerve cells are generated. This includes the production of neuroblasts and their differentiation into neurons. GOC:nln The process in which the anatomical structures of the skeleton are generated and organized. skeletal morphogenesis biological_process GO:0048705 skeletal system morphogenesis GO:0048705 The process in which the anatomical structures of the skeleton are generated and organized. GOC:dph GOC:dsf GOC:jid GOC:tb skeletal morphogenesis GOC:dph GOC:tb The process in which a relatively unspecialized cell acquires the specialized features of an oligodendrocyte. An oligodendrocyte is a type of glial cell involved in myelinating the axons of neurons in the central nervous system. biological_process GO:0048709 oligodendrocyte differentiation GO:0048709 The process in which a relatively unspecialized cell acquires the specialized features of an oligodendrocyte. An oligodendrocyte is a type of glial cell involved in myelinating the axons of neurons in the central nervous system. GOC:vp PMID:15139015 Any process that modulates the frequency, rate or extent of oligodendrocyte differentiation. biological_process GO:0048713 regulation of oligodendrocyte differentiation GO:0048713 Any process that modulates the frequency, rate or extent of oligodendrocyte differentiation. GOC:vp PMID:15139015 Any process that activates or increases the frequency, rate or extent of oligodendrocyte differentiation. up regulation of oligodendrocyte differentiation up-regulation of oligodendrocyte differentiation upregulation of oligodendrocyte differentiation activation of oligodendrocyte differentiation stimulation of oligodendrocyte differentiation biological_process GO:0048714 positive regulation of oligodendrocyte differentiation GO:0048714 Any process that activates or increases the frequency, rate or extent of oligodendrocyte differentiation. GOC:vp PMID:15139015 Any process that stops, prevents, or reduces the frequency, rate or extent of oligodendrocyte differentiation. down regulation of oligodendrocyte differentiation down-regulation of oligodendrocyte differentiation downregulation of oligodendrocyte differentiation inhibition of oligodendrocyte differentiation biological_process GO:0048715 negative regulation of oligodendrocyte differentiation GO:0048715 Any process that stops, prevents, or reduces the frequency, rate or extent of oligodendrocyte differentiation. GOC:vp PMID:15139015 The process in which the anatomical structures of a tissue are generated and organized. biological_process GO:0048729 tissue morphogenesis GO:0048729 The process in which the anatomical structures of a tissue are generated and organized. GOC:dph GOC:jid The process in which the anatomical structures of the epidermis are generated and organized. The epidermis is the outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species. biological_process hypodermis morphogenesis GO:0048730 epidermis morphogenesis GO:0048730 The process in which the anatomical structures of the epidermis are generated and organized. The epidermis is the outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species. GOC:jid UBERON:0001003 hypodermis morphogenesis GOC:kmv GOC:rk The process whose specific outcome is the progression of an organismal system over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process. biological_process GO:0048731 system development GO:0048731 The process whose specific outcome is the progression of an organismal system over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process. GOC:dph GOC:jid The process whose specific outcome is the progression of a gland over time, from its formation to the mature structure. A gland is an organ specialised for secretion. biological_process GO:0048732 gland development GO:0048732 The process whose specific outcome is the progression of a gland over time, from its formation to the mature structure. A gland is an organ specialised for secretion. GOC:jid The process whose specific outcome is the progression of an appendage over time, from its formation to the mature structure. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch. biological_process GO:0048736 appendage development GO:0048736 The process whose specific outcome is the progression of an appendage over time, from its formation to the mature structure. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch. GOC:jid GOC:rc The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure. heart muscle development biological_process GO:0048738 cardiac muscle tissue development GO:0048738 The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure. GOC:dph GOC:jid GOC:lm The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast. skeletal muscle fibre development skeletal myofiber development skeletal myofibre development biological_process GO:0048741 skeletal muscle fiber development GO:0048741 The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast. GOC:dph GOC:ef GOC:jid GOC:lm GOC:mtg_muscle Any process that modulates the frequency, rate or extent of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast. regulation of skeletal muscle fibre development regulation of skeletal myofiber development regulation of skeletal myofibre development biological_process GO:0048742 regulation of skeletal muscle fiber development GO:0048742 Any process that modulates the frequency, rate or extent of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast. GOC:dph GOC:jid GOC:mtg_muscle GOC:sm Any process that activates, maintains or increases the rate of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast. positive regulation of skeletal muscle fibre development positive regulation of skeletal myofiber development positive regulation of skeletal myofibre development up regulation of skeletal muscle fiber development up-regulation of skeletal muscle fiber development upregulation of skeletal muscle fiber development activation of skeletal muscle fiber development stimulation of skeletal muscle fiber development biological_process GO:0048743 positive regulation of skeletal muscle fiber development GO:0048743 Any process that activates, maintains or increases the rate of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast. GOC:dph GOC:jid GOC:lm GOC:mtg_muscle Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast. down regulation of skeletal muscle fiber development down-regulation of skeletal muscle fiber development downregulation of skeletal muscle fiber development negative regulation of skeletal muscle fibre development negative regulation of skeletal myofiber development negative regulation of skeletal myofibre development inhibition of skeletal muscle fiber development biological_process GO:0048744 negative regulation of skeletal muscle fiber development GO:0048744 Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast. GOC:dph GOC:jid GOC:lm GOC:mtg_muscle The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure. biological_process GO:0048745 smooth muscle tissue development GO:0048745 The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure. GOC:dph GOC:jid GOC:lm The process whose specific outcome is the progression of the compound eye over time, from its formation to the mature structure. The compound eye is an organ of sight that contains multiple repeating units, often arranged hexagonally. Each unit has its own lens and photoreceptor cell(s) and can generate either a single pixelated image or multiple images, per eye. GO:0007456 insect-type retina development biological_process GO:0048749 compound eye development GO:0048749 The process whose specific outcome is the progression of the compound eye over time, from its formation to the mature structure. The compound eye is an organ of sight that contains multiple repeating units, often arranged hexagonally. Each unit has its own lens and photoreceptor cell(s) and can generate either a single pixelated image or multiple images, per eye. GOC:jid GOC:mtg_sensu Wikipedia:Eye insect-type retina development PMID:11735386 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a pigment granule. pigment granule organisation biological_process pigment granule organization and biogenesis GO:0048753 pigment granule organization GO:0048753 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a pigment granule. GOC:rc pigment granule organization and biogenesis GOC:mah The process in which the anatomical structures of branches in an epithelial tube are generated and organized. A tube is a long hollow cylinder. biological_process tubulogenesis GO:0048754 branching morphogenesis of an epithelial tube GO:0048754 The process in which the anatomical structures of branches in an epithelial tube are generated and organized. A tube is a long hollow cylinder. GOC:dgh GOC:dph GOC:jid tubulogenesis GOC:dph GOC:tb The process in which the anatomical structures of branches in a nerve are generated and organized. This term refers to an anatomical structure (nerve) not a cell (neuron). biological_process GO:0048755 branching morphogenesis of a nerve GO:0048755 The process in which the anatomical structures of branches in a nerve are generated and organized. This term refers to an anatomical structure (nerve) not a cell (neuron). GOC:dgh GOC:dph GOC:jid The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types. biological_process GO:0048762 mesenchymal cell differentiation GO:0048762 The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types. GOC:dph GOC:jid A small, subcellular membrane-bounded vesicle containing pigment and/or pigment precursor molecules. Pigment granule biogenesis is poorly understood, as pigment granules are derived from multiple sources including the endoplasmic reticulum, coated vesicles, lysosomes, and endosomes. cellular_component GO:0048770 pigment granule GO:0048770 A small, subcellular membrane-bounded vesicle containing pigment and/or pigment precursor molecules. Pigment granule biogenesis is poorly understood, as pigment granules are derived from multiple sources including the endoplasmic reticulum, coated vesicles, lysosomes, and endosomes. GOC:jid GOC:mh A developmental process, independent of morphogenetic (shape) change, that is required for an animal organ to attain its fully functional state. An organ is a tissue or set of tissues that work together to perform a specific function or functions. biological_process GO:0048799 animal organ maturation GO:0048799 A developmental process, independent of morphogenetic (shape) change, that is required for an animal organ to attain its fully functional state. An organ is a tissue or set of tissues that work together to perform a specific function or functions. GOC:curators The process whose specific outcome is the progression of the genitalia over time, from its formation to the mature structure. genital development biological_process GO:0048806 genitalia development GO:0048806 The process whose specific outcome is the progression of the genitalia over time, from its formation to the mature structure. GOC:jid The process in which the anatomical structures of a neuron projection are generated and organized. A neuron projection is any process extending from a neural cell, such as axons or dendrites. neurite biosynthesis neurite formation neurite growth biological_process neurite morphogenesis GO:0048812 neuron projection morphogenesis GO:0048812 The process in which the anatomical structures of a neuron projection are generated and organized. A neuron projection is any process extending from a neural cell, such as axons or dendrites. GOC:mah neurite morphogenesis GOC:dph GOC:tb The process in which the anatomical structures of a dendrite are generated and organized. biological_process GO:0048813 dendrite morphogenesis GO:0048813 The process in which the anatomical structures of a dendrite are generated and organized. GOC:aruk GOC:bc GOC:jl ISBN:0198506732 PMID:22683681 Any process that modulates the frequency, rate or extent of dendrite morphogenesis. biological_process GO:0048814 regulation of dendrite morphogenesis GO:0048814 Any process that modulates the frequency, rate or extent of dendrite morphogenesis. GOC:ai The process whose specific outcome is the progression of an erythrocyte over time, from its formation to the mature structure. RBC development red blood cell development biological_process GO:0048821 erythrocyte development GO:0048821 The process whose specific outcome is the progression of an erythrocyte over time, from its formation to the mature structure. GOC:devbiol RBC development CL:0000232 red blood cell development CL:0000232 The process aimed at the progression of an enucleate erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. enucleate RBC development enucleate red blood cell development biological_process GO:0048822 enucleate erythrocyte development GO:0048822 The process aimed at the progression of an enucleate erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. GOC:devbiol enucleate RBC development CL:0000232 enucleate red blood cell development CL:0000232 The process aimed at the progression of a nucleate erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. nucleate RBC development nucleate red blood cell development biological_process GO:0048823 nucleate erythrocyte development GO:0048823 The process aimed at the progression of a nucleate erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. GOC:devbiol nucleate RBC development CL:0000232 nucleate red blood cell development CL:0000232 The process in which the anatomical structures of arterial blood vessels are generated and organized. Arteries are blood vessels that transport blood from the heart to the body and its organs. arterial morphogenesis arteriogenesis biological_process GO:0048844 artery morphogenesis GO:0048844 The process in which the anatomical structures of arterial blood vessels are generated and organized. Arteries are blood vessels that transport blood from the heart to the body and its organs. GOC:dsf PMID:16740480 arteriogenesis GOC:mtg_heart The process in which the anatomical structures of venous blood vessels are generated and organized. Veins are blood vessels that transport blood from the body and its organs to the heart. vein morphogenesis venous morphogenesis biological_process GO:0048845 venous blood vessel morphogenesis GO:0048845 The process in which the anatomical structures of venous blood vessels are generated and organized. Veins are blood vessels that transport blood from the body and its organs to the heart. GOC:dsf PMID:16740480 The process in which the anatomical structures of the diencephalon are generated and organized. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex. biological_process GO:0048852 diencephalon morphogenesis GO:0048852 The process in which the anatomical structures of the diencephalon are generated and organized. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex. GOC:cls GOC:dgh GOC:dph GOC:jid ISBN:0838580343 The process in which the anatomical structures of the forebrain are generated and organized. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions). prosencephalon morphogenesis biological_process GO:0048853 forebrain morphogenesis GO:0048853 The process in which the anatomical structures of the forebrain are generated and organized. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions). GOC:cvs GOC:dgh GOC:dph GOC:jid The process in which the anatomical structures of the brain are generated and organized. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.). biological_process GO:0048854 brain morphogenesis GO:0048854 The process in which the anatomical structures of the brain are generated and organized. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.). GOC:dgh GOC:jid The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome. development of an anatomical structure biological_process GO:0048856 anatomical structure development GO:0048856 The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome. GO_REF:0000021 The biological process whose specific outcome is the progression of a neural nucleus from its initial condition to its mature state. A neural nucleus is an anatomical structure consisting of a discrete aggregate of neuronal soma. biological_process GO:0048857 neural nucleus development GO:0048857 The biological process whose specific outcome is the progression of a neural nucleus from its initial condition to its mature state. A neural nucleus is an anatomical structure consisting of a discrete aggregate of neuronal soma. GO_REF:0000021 The process in which the anatomical structures of a cell projection are generated and organized. biological_process GO:0048858 cell projection morphogenesis GO:0048858 The process in which the anatomical structures of a cell projection are generated and organized. GO_REF:0000021 The process in which the limits of an anatomical structure are generated. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome. biological_process GO:0048859 formation of anatomical boundary GO:0048859 The process in which the limits of an anatomical structure are generated. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome. GO_REF:0000021 The process resulting in the physical partitioning and separation of a glioblast into daughter cells. biological_process GO:0048860 glioblast division GO:0048860 The process resulting in the physical partitioning and separation of a glioblast into daughter cells. GOC:devbiol The process in which a relatively unspecialized cell acquires specialized features of a stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. Wikipedia:Stem_cell_differentiation biological_process GO:0048863 stem cell differentiation GO:0048863 The process in which a relatively unspecialized cell acquires specialized features of a stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. CL:0000034 GOC:isa_complete The process whose specific outcome is the progression of the stem cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to its specific fate. biological_process GO:0048864 stem cell development GO:0048864 The process whose specific outcome is the progression of the stem cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to its specific fate. CL:0000034 GOC:isa_complete A biological process whose specific outcome is the progression of a cell over time from an initial condition to a later condition. biological_process GO:0048869 cellular developmental process GO:0048869 A biological process whose specific outcome is the progression of a cell over time from an initial condition to a later condition. GOC:isa_complete Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another. cell locomotion movement of a cell biological_process cell movement GO:0048870 cell motility GO:0048870 Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another. GOC:dgh GOC:dph GOC:isa_complete GOC:mlg Any process involved in the maintenance of an internal steady state at the level of the multicellular organism. biological_process GO:0048871 multicellular organismal-level homeostasis GO:0048871 Any process involved in the maintenance of an internal steady state at the level of the multicellular organism. GOC:isa_complete Any biological process involved in the maintenance of the steady-state number of cells within a population of cells. cell population homeostasis homeostasis of cell number biological_process GO:0048872 homeostasis of number of cells GO:0048872 Any biological process involved in the maintenance of the steady-state number of cells within a population of cells. GOC:isa_complete homeostasis of cell number GOC:dph The process whose specific outcome is the progression of a sensory system over time from its formation to the mature structure. biological_process GO:0048880 sensory system development GO:0048880 The process whose specific outcome is the progression of a sensory system over time from its formation to the mature structure. GOC:dgh The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the peripheral nervous system. biological_process GO:0048934 peripheral nervous system neuron differentiation GO:0048934 The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the peripheral nervous system. GOC:dgh The process whose specific outcome is the progression of a neuron whose cell body is located in the peripheral nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron. biological_process GO:0048935 peripheral nervous system neuron development GO:0048935 The process whose specific outcome is the progression of a neuron whose cell body is located in the peripheral nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron. GOC:dgh Any process in which a chromosome is transported to, or maintained in, a specific location. chromosome localisation establishment and maintenance of chromosome localization establishment and maintenance of chromosome position biological_process GO:0050000 chromosome localization GO:0050000 Any process in which a chromosome is transported to, or maintained in, a specific location. GOC:ai chromosome localisation GOC:mah The regulated release of catecholamines by a cell. The catecholamines are a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine. biological_process GO:0050432 catecholamine secretion GO:0050432 The regulated release of catecholamines by a cell. The catecholamines are a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine. GOC:ai GOC:ef Any process that modulates the frequency, rate or extent of the regulated release of catecholamines. biological_process GO:0050433 regulation of catecholamine secretion GO:0050433 Any process that modulates the frequency, rate or extent of the regulated release of catecholamines. GOC:ai The directed movement of nucleic acids, single or double-stranded polynucleotides involved in the storage, transmission and transfer of genetic information, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process GO:0050657 nucleic acid transport GO:0050657 The directed movement of nucleic acids, single or double-stranded polynucleotides involved in the storage, transmission and transfer of genetic information, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai ISBN:0198506732 The directed movement of RNA, ribonucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process GO:0050658 RNA transport GO:0050658 The directed movement of RNA, ribonucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai Any process that modulates the frequency, rate or extent of lymphocyte proliferation. biological_process GO:0050670 regulation of lymphocyte proliferation GO:0050670 Any process that modulates the frequency, rate or extent of lymphocyte proliferation. GOC:ai Any process that activates or increases the rate or extent of lymphocyte proliferation. up regulation of lymphocyte proliferation up-regulation of lymphocyte proliferation upregulation of lymphocyte proliferation activation of lymphocyte proliferation stimulation of lymphocyte proliferation biological_process GO:0050671 positive regulation of lymphocyte proliferation GO:0050671 Any process that activates or increases the rate or extent of lymphocyte proliferation. GOC:ai Any process that stops, prevents or reduces the rate or extent of lymphocyte proliferation. down regulation of lymphocyte proliferation down-regulation of lymphocyte proliferation downregulation of lymphocyte proliferation inhibition of lymphocyte proliferation biological_process GO:0050672 negative regulation of lymphocyte proliferation GO:0050672 Any process that stops, prevents or reduces the rate or extent of lymphocyte proliferation. GOC:ai The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances. biological_process GO:0050673 epithelial cell proliferation GO:0050673 The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances. ISBN:0721662544 Any process that modulates the frequency, rate or extent of epithelial cell proliferation. biological_process GO:0050678 regulation of epithelial cell proliferation GO:0050678 Any process that modulates the frequency, rate or extent of epithelial cell proliferation. GOC:ai Any process that activates or increases the rate or extent of epithelial cell proliferation. up regulation of epithelial cell proliferation up-regulation of epithelial cell proliferation upregulation of epithelial cell proliferation activation of epithelial cell proliferation stimulation of epithelial cell proliferation biological_process GO:0050679 positive regulation of epithelial cell proliferation GO:0050679 Any process that activates or increases the rate or extent of epithelial cell proliferation. GOC:ai Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation. down regulation of epithelial cell proliferation down-regulation of epithelial cell proliferation downregulation of epithelial cell proliferation inhibition of epithelial cell proliferation biological_process GO:0050680 negative regulation of epithelial cell proliferation GO:0050680 Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation. GOC:ai Any process that modulates the frequency, rate or extent of the controlled release of a protein from a cell. biological_process GO:0050708 regulation of protein secretion GO:0050708 Any process that modulates the frequency, rate or extent of the controlled release of a protein from a cell. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a protein from a cell. down regulation of protein secretion down-regulation of protein secretion downregulation of protein secretion inhibition of protein secretion biological_process GO:0050709 negative regulation of protein secretion GO:0050709 Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a protein from a cell. GOC:ai Any process that activates or increases the frequency, rate or extent of the controlled release of a protein from a cell. up regulation of protein secretion up-regulation of protein secretion upregulation of protein secretion activation of protein secretion stimulation of protein secretion biological_process GO:0050714 positive regulation of protein secretion GO:0050714 Any process that activates or increases the frequency, rate or extent of the controlled release of a protein from a cell. GOC:ai Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. biological_process GO:0050727 regulation of inflammatory response GO:0050727 Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of the inflammatory response. GO:0030236 Reactome:R-HSA-9018678 anti-inflammatory response down regulation of inflammatory response down-regulation of inflammatory response downregulation of inflammatory response inhibition of inflammatory response biological_process GO:0050728 negative regulation of inflammatory response GO:0050728 Any process that stops, prevents, or reduces the frequency, rate or extent of the inflammatory response. GOC:ai Reactome:R-HSA-9018678 Biosynthesis of specialized proresolving mediators (SPMs) Any process that activates or increases the frequency, rate or extent of the inflammatory response. up regulation of inflammatory response up-regulation of inflammatory response upregulation of inflammatory response activation of inflammatory response stimulation of inflammatory response biological_process GO:0050729 positive regulation of inflammatory response GO:0050729 Any process that activates or increases the frequency, rate or extent of the inflammatory response. GOC:ai Any process that modulates the frequency, rate or extent of neurogenesis, the generation of cells in the nervous system. biological_process GO:0050767 regulation of neurogenesis GO:0050767 Any process that modulates the frequency, rate or extent of neurogenesis, the generation of cells in the nervous system. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of neurogenesis, the generation of cells within the nervous system. down regulation of neurogenesis down-regulation of neurogenesis downregulation of neurogenesis inhibition of neurogenesis biological_process GO:0050768 negative regulation of neurogenesis GO:0050768 Any process that stops, prevents, or reduces the frequency, rate or extent of neurogenesis, the generation of cells within the nervous system. GOC:ai Any process that activates or increases the frequency, rate or extent of neurogenesis, the generation of cells within the nervous system. up regulation of neurogenesis up-regulation of neurogenesis upregulation of neurogenesis activation of neurogenesis stimulation of neurogenesis biological_process GO:0050769 positive regulation of neurogenesis GO:0050769 Any process that activates or increases the frequency, rate or extent of neurogenesis, the generation of cells within the nervous system. GOC:ai Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron. Reactome:R-HSA-193697 biological_process GO:0050770 regulation of axonogenesis GO:0050770 Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron. GOC:ai Reactome:R-HSA-193697 p75NTR regulates axonogenesis Any process that stops, prevents, or reduces the frequency, rate or extent of axonogenesis. Reactome:R-HSA-193634 down regulation of axonogenesis down-regulation of axonogenesis downregulation of axonogenesis inhibition of axonogenesis biological_process GO:0050771 negative regulation of axonogenesis GO:0050771 Any process that stops, prevents, or reduces the frequency, rate or extent of axonogenesis. GOC:ai Reactome:R-HSA-193634 Axonal growth inhibition (RHOA activation) Any process that activates or increases the frequency, rate or extent of axonogenesis. Reactome:R-HSA-209563 up regulation of axonogenesis up-regulation of axonogenesis upregulation of axonogenesis activation of axonogenesis stimulation of axonogenesis biological_process GO:0050772 positive regulation of axonogenesis GO:0050772 Any process that activates or increases the frequency, rate or extent of axonogenesis. GOC:ai Reactome:R-HSA-209563 Axonal growth stimulation Any process that modulates the frequency, rate or extent of dendrite development. biological_process GO:0050773 regulation of dendrite development GO:0050773 Any process that modulates the frequency, rate or extent of dendrite development. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of dendrite morphogenesis. down regulation of dendrite morphogenesis down-regulation of dendrite morphogenesis downregulation of dendrite morphogenesis inhibition of dendrite morphogenesis biological_process GO:0050774 negative regulation of dendrite morphogenesis GO:0050774 Any process that stops, prevents, or reduces the frequency, rate or extent of dendrite morphogenesis. GOC:ai Any process that activates or increases the frequency, rate or extent of dendrite morphogenesis. up regulation of dendrite morphogenesis up-regulation of dendrite morphogenesis upregulation of dendrite morphogenesis activation of dendrite morphogenesis stimulation of dendrite morphogenesis biological_process GO:0050775 positive regulation of dendrite morphogenesis GO:0050775 Any process that activates or increases the frequency, rate or extent of dendrite morphogenesis. GOC:ai Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule. GO:0050791 regulation of physiological process biological_process GO:0050789 regulation of biological process GO:0050789 Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule. GOC:ai GOC:go_curators Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). biological_process GO:0050793 regulation of developmental process GO:0050793 Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). GOC:go_curators Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level. GO:0051244 regulation of cellular physiological process biological_process GO:0050794 regulation of cellular process GO:0050794 Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level. GOC:go_curators Any process that modulates the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli. regulation of behaviour biological_process GO:0050795 regulation of behavior GO:0050795 Any process that modulates the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli. GOC:go_curators GOC:pr Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell). biological_process GO:0050803 regulation of synapse structure or activity GO:0050803 Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell). GOC:ai Any process that modulates the frequency or amplitude of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. Amplitude, in this case, refers to the change in postsynaptic membrane potential due to a single instance of synaptic transmission. modulation of synaptic transmission regulation of chemical synaptic transmission regulation of synaptic transmission biological_process GO:0050804 modulation of chemical synaptic transmission GO:0050804 Any process that modulates the frequency or amplitude of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. Amplitude, in this case, refers to the change in postsynaptic membrane potential due to a single instance of synaptic transmission. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. down regulation of synaptic transmission down-regulation of synaptic transmission downregulation of synaptic transmission inhibition of synaptic transmission biological_process GO:0050805 negative regulation of synaptic transmission GO:0050805 Any process that stops, prevents, or reduces the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. GOC:ai Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. up regulation of synaptic transmission up-regulation of synaptic transmission upregulation of synaptic transmission activation of synaptic transmission stimulation of synaptic transmission biological_process GO:0050806 positive regulation of synaptic transmission GO:0050806 Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. GOC:ai Any process that modulates the physical form of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell). regulation of synapse organisation regulation of synapse structure biological_process regulation of synapse organization and biogenesis GO:0050807 regulation of synapse organization GO:0050807 Any process that modulates the physical form of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell). GOC:ai GOC:dph GOC:tb regulation of synapse organisation GOC:mah regulation of synapse organization and biogenesis GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell). synapse organisation biological_process synapse development synapse morphogenesis synapse organization and biogenesis GO:0050808 synapse organization GO:0050808 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell). GOC:ai GOC:pr synapse development GOC:aruk synapse morphogenesis GOC:BHF synapse organization and biogenesis GOC:mah Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus. regulation of steroid anabolism regulation of steroid biosynthesis regulation of steroid formation regulation of steroid synthesis regulation of steroidogenesis biological_process GO:0050810 regulation of steroid biosynthetic process GO:0050810 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus. GOC:ai Any process that modulates the frequency, rate or extent of cell activation, the change in the morphology or behavior of a cell resulting from exposure to an activating factor such as a cellular or soluble ligand. biological_process GO:0050865 regulation of cell activation GO:0050865 Any process that modulates the frequency, rate or extent of cell activation, the change in the morphology or behavior of a cell resulting from exposure to an activating factor such as a cellular or soluble ligand. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of cell activation. down regulation of cell activation down-regulation of cell activation downregulation of cell activation inhibition of cell activation biological_process GO:0050866 negative regulation of cell activation GO:0050866 Any process that stops, prevents, or reduces the frequency, rate or extent of cell activation. GOC:ai Any process that activates or increases the frequency, rate or extent of activation. up regulation of cell activation up-regulation of cell activation upregulation of cell activation activation of cell activation stimulation of cell activation biological_process GO:0050867 positive regulation of cell activation GO:0050867 Any process that activates or increases the frequency, rate or extent of activation. GOC:ai An organ system process carried out by any of the organs or tissues of the neurological system. neurological system process neurophysiological process biological_process pan-neural process GO:0050877 nervous system process GO:0050877 An organ system process carried out by any of the organs or tissues of the neurological system. GOC:ai GOC:mtg_cardio Any physiological process involved in changing the position of a multicellular organism or an anatomical part of a multicellular organism. biological_process GO:0050879 multicellular organismal movement GO:0050879 Any physiological process involved in changing the position of a multicellular organism or an anatomical part of a multicellular organism. GOC:dph GOC:mtg_muscle GOC:tb The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system. biological_process GO:0050881 musculoskeletal movement GO:0050881 The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system. GOC:dph The process that involves the secretion of or response to endocrine hormones. An endocrine hormone is a hormone released into the circulatory system. endocrine physiological process endocrine physiology biological_process GO:0050886 endocrine process GO:0050886 The process that involves the secretion of or response to endocrine hormones. An endocrine hormone is a hormone released into the circulatory system. ISBN:0721662544 The operation of the mind by which an organism becomes aware of objects of thought or perception; it includes the mental activities associated with thinking, learning, and memory. Wikipedia:Cognition biological_process GO:0050890 cognition GO:0050890 The operation of the mind by which an organism becomes aware of objects of thought or perception; it includes the mental activities associated with thinking, learning, and memory. ISBN:0721619908 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism. GO:0051869 physiological response to stimulus biological_process GO:0050896 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. response to stimulus GO:0050896 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism. GOC:ai GOC:bf The movement of a leukocyte within or between different tissues and organs of the body. Reactome:R-HSA-202733 immune cell migration immune cell trafficking leucocyte migration leucocyte trafficking leukocyte trafficking biological_process GO:0050900 leukocyte migration GO:0050900 The movement of a leukocyte within or between different tissues and organs of the body. GOC:add ISBN:0781735149 PMID:14680625 PMID:14708592 PMID:7507411 PMID:8600538 Reactome:R-HSA-202733 Cell surface interactions at the vascular wall Any process pertaining to the functions of the nervous and muscular systems of an organism. neuromotor process neuromuscular physiological process biological_process GO:0050905 neuromuscular process GO:0050905 Any process pertaining to the functions of the nervous and muscular systems of an organism. GOC:ai The series of events involved in sensory perception in which a sensory stimulus is received and converted into a molecular signal. Wikipedia:Transduction_(physiology) sensory detection of stimulus sensory perception, sensory transduction of stimulus sensory perception, stimulus detection sensory transduction biological_process GO:0050906 detection of stimulus involved in sensory perception GO:0050906 The series of events involved in sensory perception in which a sensory stimulus is received and converted into a molecular signal. GOC:ai GOC:dos GOC:dph The series of events in which a chemical stimulus is received and converted into a molecular signal as part of sensory perception. sensory detection of chemical stimulus sensory detection of chemical stimulus during sensory perception sensory perception, sensory detection of chemical stimulus sensory perception, sensory transduction of chemical stimulus sensory transduction of chemical stimulus sensory transduction of chemical stimulus during sensory perception biological_process GO:0050907 detection of chemical stimulus involved in sensory perception GO:0050907 The series of events in which a chemical stimulus is received and converted into a molecular signal as part of sensory perception. GOC:ai GOC:dos The series of events involved in visual perception in which a light stimulus is received and converted into a molecular signal. sensory detection of light during visual perception sensory detection of light stimulus during visual perception sensory transduction of light during visual perception sensory transduction of light stimulus during visual perception visual perception, detection of light stimulus visual perception, sensory transduction during perception of light visual perception, sensory transduction of light stimulus biological_process GO:0050908 detection of light stimulus involved in visual perception GO:0050908 The series of events involved in visual perception in which a light stimulus is received and converted into a molecular signal. GOC:ai GOC:dos The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells. This is a neurological process. Reactome:R-HSA-9717189 Wikipedia:Taste gustation sense of taste taste taste perception biological_process GO:0050909 sensory perception of taste GO:0050909 The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells. This is a neurological process. GOC:ai Reactome:R-HSA-9717189 Sensory perception of taste The series of events involved in the perception of taste in which a gustatory chemical stimulus is received and converted into a molecular signal. taste perception perception of taste, detection of chemical stimulus perception of taste, sensory detection of chemical stimulus perception of taste, sensory transduction of chemical stimulus sensory detection of chemical stimulus during perception of taste sensory detection of taste sensory transduction of chemical stimulus during perception of taste sensory transduction of taste biological_process GO:0050912 detection of chemical stimulus involved in sensory perception of taste GO:0050912 The series of events involved in the perception of taste in which a gustatory chemical stimulus is received and converted into a molecular signal. GOC:ai The process in which a relatively unspecialized cell acquires the specialized features of a pigmented cell, such as a melanocyte. GO:0043357 GO:0043358 chromatophore differentiation pigmented cell differentiation biological_process GO:0050931 Note that the chromatophore mentioned here is distinct from the pigment bearing structure found in certain photosynthetic bacteria and cyanobacteria. It is also different from the plant chromoplast, which is also sometimes called a chromatophore. pigment cell differentiation GO:0050931 The process in which a relatively unspecialized cell acquires the specialized features of a pigmented cell, such as a melanocyte. GOC:dgh Any process that modulates the frequency, rate or extent of pigmented cell differentiation. biological_process GO:0050932 regulation of pigment cell differentiation GO:0050932 Any process that modulates the frequency, rate or extent of pigmented cell differentiation. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of pigment cell differentiation. down regulation of pigment cell differentiation down-regulation of pigment cell differentiation downregulation of pigment cell differentiation inhibition of pigment cell differentiation biological_process GO:0050941 negative regulation of pigment cell differentiation GO:0050941 Any process that stops, prevents, or reduces the frequency, rate or extent of pigment cell differentiation. GOC:ai Any process that activates or increases the frequency, rate or extent of pigment cell differentiation. up regulation of pigment cell differentiation up-regulation of pigment cell differentiation upregulation of pigment cell differentiation activation of pigment cell differentiation stimulation of pigment cell differentiation biological_process GO:0050942 positive regulation of pigment cell differentiation GO:0050942 Any process that activates or increases the frequency, rate or extent of pigment cell differentiation. GOC:ai The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. biological_process GO:0050953 sensory perception of light stimulus GO:0050953 The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. GOC:ai The series of events required for an organism to receive a sensory mechanical stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. mechanosensory perception perception of mechanical stimulus biological_process chemi-mechanical coupling GO:0050954 sensory perception of mechanical stimulus GO:0050954 The series of events required for an organism to receive a sensory mechanical stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. GOC:ai The series of events in which a light stimulus is received by a cell and converted into a molecular signal as part of the sensory perception of light. sensory detection of light stimulus sensory detection of light stimulus during sensory perception sensory perception, sensory detection of light stimulus sensory perception, sensory transduction of light stimulus sensory transduction of light stimulus sensory transduction of light stimulus during sensory perception biological_process GO:0050962 detection of light stimulus involved in sensory perception GO:0050962 The series of events in which a light stimulus is received by a cell and converted into a molecular signal as part of the sensory perception of light. GOC:ai GOC:dos The series of events involved in the perception of pain in which a chemical stimulus is received and converted into a molecular signal. perception of pain, detection of chemical stimulus perception of pain, sensory detection of chemical stimulus perception of pain, sensory transduction of chemical stimulus sensory detection of chemical stimulus during perception of pain sensory transduction of chemical stimulus during perception of pain biological_process chemical nociception GO:0050968 detection of chemical stimulus involved in sensory perception of pain GO:0050968 The series of events involved in the perception of pain in which a chemical stimulus is received and converted into a molecular signal. GOC:ai chemical nociception GOC:pr The series of events required for an organism to receive a touch stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. The perception of touch in animals is mediated by mechanoreceptors in the skin and mucous membranes and is the sense by which contact with objects gives evidence as to certain of their qualities. Different types of touch can be perceived (for example, light, coarse, pressure and tickling) and the stimulus may be external or internal (e.g. the feeling of a full stomach). Wikipedia:Touch perception of touch tactile sense taction tactition biological_process GO:0050975 sensory perception of touch GO:0050975 The series of events required for an organism to receive a touch stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. The perception of touch in animals is mediated by mechanoreceptors in the skin and mucous membranes and is the sense by which contact with objects gives evidence as to certain of their qualities. Different types of touch can be perceived (for example, light, coarse, pressure and tickling) and the stimulus may be external or internal (e.g. the feeling of a full stomach). GOC:ai Any process that modulates the frequency, rate or extent of the controlled release of a substance from a cell or a tissue. biological_process GO:0051046 regulation of secretion GO:0051046 Any process that modulates the frequency, rate or extent of the controlled release of a substance from a cell or a tissue. GOC:ai Any process that activates or increases the frequency, rate or extent of the controlled release of a substance from a cell or a tissue. up regulation of secretion up-regulation of secretion upregulation of secretion activation of secretion stimulation of secretion biological_process GO:0051047 positive regulation of secretion GO:0051047 Any process that activates or increases the frequency, rate or extent of the controlled release of a substance from a cell or a tissue. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a substance from a cell or a tissue. down regulation of secretion down-regulation of secretion downregulation of secretion inhibition of secretion biological_process GO:0051048 negative regulation of secretion GO:0051048 Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a substance from a cell or a tissue. GOC:ai Any process that modulates the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process GO:0051049 regulation of transport GO:0051049 Any process that modulates the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai Any process that activates or increases the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. up regulation of transport up-regulation of transport upregulation of transport activation of transport stimulation of transport biological_process GO:0051050 positive regulation of transport GO:0051050 Any process that activates or increases the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. down regulation of transport down-regulation of transport downregulation of transport inhibition of transport biological_process GO:0051051 negative regulation of transport GO:0051051 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids. down regulation of lipid biosynthetic process down-regulation of lipid biosynthetic process downregulation of lipid biosynthetic process negative regulation of lipid anabolism negative regulation of lipid biosynthesis negative regulation of lipid formation negative regulation of lipid synthesis negative regulation of lipogenesis inhibition of lipid biosynthetic process biological_process GO:0051055 negative regulation of lipid biosynthetic process GO:0051055 Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids. GOC:ai negative regulation of lipogenesis GOC:sl The cell cycle process in which the controlled breakdown of the nuclear membranes during meiotic cell division occurs. biological_process meiotic nuclear envelope breakdown meiotic nuclear envelope catabolism meiotic nuclear envelope degradation meiotic nuclear envelope disassembly GO:0051078 meiotic nuclear membrane disassembly GO:0051078 The cell cycle process in which the controlled breakdown of the nuclear membranes during meiotic cell division occurs. GOC:bf The controlled breakdown of the nuclear membranes, for example during cellular division. biological_process nuclear envelope breakdown nuclear envelope catabolism nuclear envelope degradation nuclear envelope disassembly GO:0051081 nuclear membrane disassembly GO:0051081 The controlled breakdown of the nuclear membranes, for example during cellular division. GOC:ai Any process that stops, prevents or reduces the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). down regulation of developmental process down-regulation of developmental process downregulation of developmental process inhibition of developmental process biological_process GO:0051093 negative regulation of developmental process GO:0051093 Any process that stops, prevents or reduces the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). GOC:ai Any process that activates or increases the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). up regulation of developmental process up-regulation of developmental process upregulation of developmental process activation of developmental process stimulation of developmental process biological_process GO:0051094 positive regulation of developmental process GO:0051094 Any process that activates or increases the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). GOC:ai Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell structures, including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope. regulation of cellular component organisation biological_process regulation of cell organisation regulation of cell organization regulation of cellular component organization and biogenesis GO:0051128 regulation of cellular component organization GO:0051128 Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell structures, including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope. GOC:ai regulation of cell organisation GOC:mah regulation of cell organization GOC:mah regulation of cellular component organization and biogenesis GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell structures, including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope. down regulation of cell organization down-regulation of cell organization downregulation of cell organization inhibition of cell organization biological_process negative regulation of cell organisation negative regulation of cellular component organization and biogenesis GO:0051129 negative regulation of cellular component organization GO:0051129 Any process that stops, prevents, or reduces the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell structures, including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope. GOC:ai negative regulation of cell organisation GOC:mah negative regulation of cellular component organization and biogenesis GOC:mah Any process that activates or increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell structures, including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope. positive regulation of cell organisation up regulation of cell organization up-regulation of cell organization upregulation of cell organization activation of cell organization stimulation of cell organization biological_process positive regulation of cellular component organization and biogenesis GO:0051130 positive regulation of cellular component organization GO:0051130 Any process that activates or increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell structures, including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope. GOC:ai positive regulation of cellular component organization and biogenesis GOC:mah The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary. nonstriated muscle cell differentiation biological_process GO:0051145 smooth muscle cell differentiation GO:0051145 The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary. CL:0000192 GOC:ai The process in which a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle. voluntary muscle cell differentiation biological_process GO:0051146 striated muscle cell differentiation GO:0051146 The process in which a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle. CL:0000737 GOC:ai Any process that modulates the frequency, rate or extent of muscle cell differentiation. biological_process GO:0051147 regulation of muscle cell differentiation GO:0051147 Any process that modulates the frequency, rate or extent of muscle cell differentiation. CL:0000187 GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of muscle cell differentiation. down regulation of muscle cell differentiation down-regulation of muscle cell differentiation downregulation of muscle cell differentiation inhibition of muscle cell differentiation biological_process GO:0051148 negative regulation of muscle cell differentiation GO:0051148 Any process that stops, prevents, or reduces the frequency, rate or extent of muscle cell differentiation. CL:0000187 GOC:ai Any process that activates or increases the frequency, rate or extent of muscle cell differentiation. Reactome:R-HSA-525793 up regulation of muscle cell differentiation up-regulation of muscle cell differentiation upregulation of muscle cell differentiation activation of muscle cell differentiation stimulation of muscle cell differentiation biological_process GO:0051149 positive regulation of muscle cell differentiation GO:0051149 Any process that activates or increases the frequency, rate or extent of muscle cell differentiation. CL:0000187 GOC:ai Reactome:R-HSA-525793 Myogenesis Any process that modulates the frequency, rate or extent of smooth muscle cell differentiation. biological_process GO:0051150 regulation of smooth muscle cell differentiation GO:0051150 Any process that modulates the frequency, rate or extent of smooth muscle cell differentiation. CL:0000192 GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle cell differentiation. down regulation of smooth muscle cell differentiation down-regulation of smooth muscle cell differentiation downregulation of smooth muscle cell differentiation inhibition of smooth muscle cell differentiation biological_process GO:0051151 negative regulation of smooth muscle cell differentiation GO:0051151 Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle cell differentiation. CL:0000192 GOC:ai Any process that activates or increases the frequency, rate or extent of smooth muscle cell differentiation. up regulation of smooth muscle cell differentiation up-regulation of smooth muscle cell differentiation upregulation of smooth muscle cell differentiation activation of smooth muscle cell differentiation stimulation of smooth muscle cell differentiation biological_process GO:0051152 positive regulation of smooth muscle cell differentiation GO:0051152 Any process that activates or increases the frequency, rate or extent of smooth muscle cell differentiation. CL:0000192 GOC:ai Any process that modulates the frequency, rate or extent of striated muscle cell differentiation. biological_process GO:0051153 regulation of striated muscle cell differentiation GO:0051153 Any process that modulates the frequency, rate or extent of striated muscle cell differentiation. CL:0000737 GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle cell differentiation. down regulation of striated muscle cell differentiation down-regulation of striated muscle cell differentiation downregulation of striated muscle cell differentiation inhibition of striated muscle cell differentiation biological_process GO:0051154 negative regulation of striated muscle cell differentiation GO:0051154 Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle cell differentiation. CL:0000737 GOC:ai Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation. up regulation of striated muscle cell differentiation up-regulation of striated muscle cell differentiation upregulation of striated muscle cell differentiation activation of striated muscle cell differentiation stimulation of striated muscle cell differentiation biological_process GO:0051155 positive regulation of striated muscle cell differentiation GO:0051155 Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation. CL:0000737 GOC:ai The directed movement of substances out of the nucleus. export from nucleus nucleus export substance nuclear export biological_process GO:0051168 nuclear export GO:0051168 The directed movement of substances out of the nucleus. GOC:ai The directed movement of substances into, out of, or within the nucleus. Wikipedia:Nuclear_transport nucleus transport biological_process GO:0051169 nuclear transport GO:0051169 The directed movement of substances into, out of, or within the nucleus. GOC:ai The directed movement of substances into the nucleus. jl 2013-12-19T15:26:34Z GO:1902593 nuclear import nuclear translocation biological_process GO:0051170 import into nucleus GO:0051170 The directed movement of substances into the nucleus. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving sulfur or compounds containing sulfur. down regulation of sulfur metabolic process down-regulation of sulfur metabolic process downregulation of sulfur metabolic process negative regulation of sulfur metabolism negative regulation of sulphur metabolic process negative regulation of sulphur metabolism inhibition of sulfur metabolic process biological_process GO:0051175 negative regulation of sulfur metabolic process GO:0051175 Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving sulfur or compounds containing sulfur. GOC:ai Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving sulfur or compounds containing sulfur. positive regulation of sulfur metabolism positive regulation of sulphur metabolic process positive regulation of sulphur metabolism up regulation of sulfur metabolic process up-regulation of sulfur metabolic process upregulation of sulfur metabolic process activation of sulfur metabolic process stimulation of sulfur metabolic process biological_process GO:0051176 positive regulation of sulfur metabolic process GO:0051176 Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving sulfur or compounds containing sulfur. GOC:ai Any process in which a cell, a substance, or a cellular entity, such as a protein complex or organelle, is transported, tethered to or otherwise maintained in a specific location. In the case of substances, localization may also be achieved via selective degradation. jl 2013-12-18T13:51:04Z GO:1902578 establishment and maintenance of localization establishment and maintenance of position localisation establishment and maintenance of cellular component location establishment and maintenance of substance location establishment and maintenance of substrate location biological_process single organism localization single-organism localization GO:0051179 localization GO:0051179 Any process in which a cell, a substance, or a cellular entity, such as a protein complex or organelle, is transported, tethered to or otherwise maintained in a specific location. In the case of substances, localization may also be achieved via selective degradation. GOC:ai GOC:dos localisation GOC:mah single organism localization GOC:TermGenie The process whose specific outcome is the progression of a cartilage element over time, from its formation to the mature structure. Cartilage elements are skeletal elements that consist of connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate. Wikipedia:Chondrogenesis cartilage biogenesis cartilage biosynthesis cartilage element development cartilage formation cartilage organ development chondrogenesis biological_process GO:0051216 cartilage development GO:0051216 The process whose specific outcome is the progression of a cartilage element over time, from its formation to the mature structure. Cartilage elements are skeletal elements that consist of connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate. GOC:cjm PMID:23251424 Any process that activates or increases the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. up regulation of protein transport up-regulation of protein transport upregulation of protein transport activation of protein transport stimulation of protein transport biological_process GO:0051222 positive regulation of protein transport GO:0051222 Any process that activates or increases the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai Any process that modulates the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process GO:0051223 regulation of protein transport GO:0051223 Any process that modulates the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. down regulation of protein transport down-regulation of protein transport downregulation of protein transport inhibition of protein transport biological_process GO:0051224 negative regulation of protein transport GO:0051224 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai Any process that localizes a substance or cellular component. This may occur via movement, tethering or selective degradation. establishment of localisation biological_process GO:0051234 establishment of localization GO:0051234 Any process that localizes a substance or cellular component. This may occur via movement, tethering or selective degradation. GOC:ai GOC:dos establishment of localisation GOC:mah Any process in which a cell, substance or cellular entity, such as a protein complex or organelle, is maintained in a location and prevented from moving elsewhere. maintenance of localization retention sequestering storage biological_process GO:0051235 maintenance of location GO:0051235 Any process in which a cell, substance or cellular entity, such as a protein complex or organelle, is maintained in a location and prevented from moving elsewhere. GOC:ai GOC:dph GOC:tb The directed movement of RNA to a specific location. RNA positioning RNA recruitment establishment of RNA localisation biological_process GO:0051236 establishment of RNA localization GO:0051236 The directed movement of RNA to a specific location. GOC:ai establishment of RNA localisation GOC:mah Any process that modulates the frequency, rate or extent of a multicellular organismal process, the processes pertinent to the function of a multicellular organism above the cellular level; includes the integrated processes of tissues and organs. biological_process GO:0051239 regulation of multicellular organismal process GO:0051239 Any process that modulates the frequency, rate or extent of a multicellular organismal process, the processes pertinent to the function of a multicellular organism above the cellular level; includes the integrated processes of tissues and organs. GOC:ai GOC:dph GOC:tb Any process that activates or increases the frequency, rate or extent of an organismal process, any of the processes pertinent to the function of an organism above the cellular level; includes the integrated processes of tissues and organs. up regulation of multicellular organismal process up-regulation of multicellular organismal process upregulation of multicellular organismal process activation of multicellular organismal process stimulation of multicellular organismal process biological_process GO:0051240 positive regulation of multicellular organismal process GO:0051240 Any process that activates or increases the frequency, rate or extent of an organismal process, any of the processes pertinent to the function of an organism above the cellular level; includes the integrated processes of tissues and organs. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of an organismal process, the processes pertinent to the function of an organism above the cellular level; includes the integrated processes of tissues and organs. down regulation of multicellular organismal process down-regulation of multicellular organismal process downregulation of multicellular organismal process inhibition of multicellular organismal process biological_process GO:0051241 negative regulation of multicellular organismal process GO:0051241 Any process that stops, prevents, or reduces the frequency, rate or extent of an organismal process, the processes pertinent to the function of an organism above the cellular level; includes the integrated processes of tissues and organs. GOC:ai Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein. GO:0032268 regulation of protein metabolism biological_process regulation of cellular protein metabolic process regulation of cellular protein metabolism GO:0051246 regulation of protein metabolic process GO:0051246 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein. GOC:ai Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a protein. GO:0032270 positive regulation of cellular protein metabolic process positive regulation of cellular protein metabolism positive regulation of protein metabolism up regulation of cellular protein metabolic process up regulation of protein metabolic process up-regulation of cellular protein metabolic process up-regulation of protein metabolic process upregulation of cellular protein metabolic process upregulation of protein metabolic process activation of cellular protein metabolic process activation of protein metabolic process stimulation of cellular protein metabolic process stimulation of protein metabolic process biological_process GO:0051247 positive regulation of protein metabolic process GO:0051247 Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a protein. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of chemical reactions and pathways involving a protein. GO:0032269 down regulation of cellular protein metabolic process down regulation of protein metabolic process down-regulation of cellular protein metabolic process down-regulation of protein metabolic process downregulation of cellular protein metabolic process downregulation of protein metabolic process negative regulation of cellular protein metabolic process negative regulation of cellular protein metabolism negative regulation of protein metabolism inhibition of cellular protein metabolic process inhibition of protein metabolic process biological_process GO:0051248 negative regulation of protein metabolic process GO:0051248 Any process that stops, prevents, or reduces the frequency, rate or extent of chemical reactions and pathways involving a protein. GOC:ai Any process that modulates the frequency, rate or extent of lymphocyte activation. biological_process GO:0051249 regulation of lymphocyte activation GO:0051249 Any process that modulates the frequency, rate or extent of lymphocyte activation. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of lymphocyte activation. down regulation of lymphocyte activation down-regulation of lymphocyte activation downregulation of lymphocyte activation inhibition of lymphocyte activation biological_process GO:0051250 negative regulation of lymphocyte activation GO:0051250 Any process that stops, prevents, or reduces the frequency, rate or extent of lymphocyte activation. GOC:ai Any process that activates or increases the frequency, rate or extent of lymphocyte activation. up regulation of lymphocyte activation up-regulation of lymphocyte activation upregulation of lymphocyte activation activation of lymphocyte activation stimulation of lymphocyte activation biological_process GO:0051251 positive regulation of lymphocyte activation GO:0051251 Any process that activates or increases the frequency, rate or extent of lymphocyte activation. GOC:ai Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving RNA. regulation of RNA metabolism biological_process GO:0051252 regulation of RNA metabolic process GO:0051252 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving RNA. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving RNA. down regulation of RNA metabolic process down-regulation of RNA metabolic process downregulation of RNA metabolic process negative regulation of RNA metabolism inhibition of RNA metabolic process biological_process GO:0051253 negative regulation of RNA metabolic process GO:0051253 Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving RNA. GOC:ai Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving RNA. positive regulation of RNA metabolism up regulation of RNA metabolic process up-regulation of RNA metabolic process upregulation of RNA metabolic process activation of RNA metabolic process stimulation of RNA metabolic process biological_process GO:0051254 positive regulation of RNA metabolic process GO:0051254 Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving RNA. GOC:ai The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein. protein polymer biosynthesis protein polymer biosynthetic process protein polymer formation biological_process GO:0051258 protein polymerization GO:0051258 The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein. GOC:ai The process in which protein polymers, compounds composed of a large number of component monomers, are broken down. Depolymerization occurs by the successive removal of monomers from an existing poly- or oligomeric protein. protein polymer breakdown protein polymer catabolic process protein polymer catabolism protein polymer degradation biological_process GO:0051261 protein depolymerization GO:0051261 The process in which protein polymers, compounds composed of a large number of component monomers, are broken down. Depolymerization occurs by the successive removal of monomers from an existing poly- or oligomeric protein. GOC:ai A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information. This term covers covalent modifications at the molecular level as well as spatial relationships among the major components of a chromosome. GO:0006323 GO:0007001 GO:0051277 DNA condensation chromosome organisation DNA packaging biological_process chromosome organization and biogenesis maintenance of genome integrity nuclear genome maintenance GO:0051276 chromosome organization GO:0051276 A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information. This term covers covalent modifications at the molecular level as well as spatial relationships among the major components of a chromosome. GOC:ai GOC:dph GOC:jl GOC:mah chromosome organization and biogenesis GOC:mah The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells. Wikipedia:Cell_division biological_process GO:0051301 Note that this term differs from 'cytokinesis ; GO:0000910' in that cytokinesis does not include nuclear division. cell division GO:0051301 The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells. GOC:di GOC:go_curators GOC:pr Any process that modulates the frequency, rate or extent of the physical partitioning and separation of a cell into daughter cells. biological_process GO:0051302 regulation of cell division GO:0051302 Any process that modulates the frequency, rate or extent of the physical partitioning and separation of a cell into daughter cells. GOC:go_curators The directed movement of a chromosome to a specific location. chromosome positioning establishment of chromosome localisation biological_process GO:0051303 establishment of chromosome localization GO:0051303 The directed movement of a chromosome to a specific location. GOC:ai establishment of chromosome localisation GOC:mah Progression through the phases of the meiotic cell cycle, in which canonically a cell replicates to produce four offspring with half the chromosomal content of the progenitor cell via two nuclear divisions. GO:0007126 Wikipedia:Meiosis biological_process meiosis GO:0051321 Note that this term should not be confused with 'GO:0140013 ; meiotic nuclear division'. 'GO:0051321 ; meiotic cell cycle represents the entire mitotic cell cycle, while 'GO:0140013 meiotic nuclear division' specifically represents the actual nuclear division step of the mitotic cell cycle. meiotic cell cycle GO:0051321 Progression through the phases of the meiotic cell cycle, in which canonically a cell replicates to produce four offspring with half the chromosomal content of the progenitor cell via two nuclear divisions. GOC:ai Any apoptotic process in a neuron, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system. apoptosis of neuronal cells apoptosis of neurons neuron programmed cell death by apoptosis neuronal cell apoptosis neuronal cell programmed cell death by apoptosis programmed cell death of neuronal cells by apoptosis programmed cell death of neurons by apoptosis programmed cell death, neuronal cells programmed cell death, neurons neuron apoptosis biological_process GO:0051402 neuron apoptotic process GO:0051402 Any apoptotic process in a neuron, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system. CL:0000540 GOC:mtg_apoptosis The 'de novo' formation of a microtubule, mediated by the microtubule organizing center. MTOC-mediated microtubule nucleation microtubule nucleation by MTOC microtubule nucleation by microtubule organising centre microtubule organizing center-mediated microtubule nucleation biological_process GO:0051418 microtubule nucleation by microtubule organizing center GO:0051418 The 'de novo' formation of a microtubule, mediated by the microtubule organizing center. GOC:ai Any process that modulates the rate or extent of progression through the meiotic cell cycle. meiotic cell cycle modulation meiotic cell cycle regulation modulation of meiotic cell cycle progression regulation of meiotic cell cycle progression regulation of progression through meiotic cell cycle biological_process meiotic cell cycle regulator GO:0051445 regulation of meiotic cell cycle GO:0051445 Any process that modulates the rate or extent of progression through the meiotic cell cycle. GOC:ai GOC:dph GOC:tb regulation of progression through meiotic cell cycle GOC:dph GOC:tb Any process that activates or increases the frequency, rate or extent of progression through the meiotic cell cycle. positive regulation of meiotic cell cycle progression positive regulation of progression through meiotic cell cycle up regulation of progression through meiotic cell cycle up-regulation of progression through meiotic cell cycle upregulation of progression through meiotic cell cycle activation of progression through meiotic cell cycle stimulation of progression through meiotic cell cycle biological_process GO:0051446 positive regulation of meiotic cell cycle GO:0051446 Any process that activates or increases the frequency, rate or extent of progression through the meiotic cell cycle. GOC:ai GOC:dph GOC:tb positive regulation of progression through meiotic cell cycle GOC:dph GOC:tb Any process that stops, prevents or reduces the rate or extent of progression through the meiotic cell cycle. down regulation of progression through meiotic cell cycle down-regulation of progression through meiotic cell cycle downregulation of progression through meiotic cell cycle negative regulation of meiotic cell cycle progression negative regulation of progression through meiotic cell cycle inhibition of progression through meiotic cell cycle biological_process GO:0051447 negative regulation of meiotic cell cycle GO:0051447 Any process that stops, prevents or reduces the rate or extent of progression through the meiotic cell cycle. GOC:ai GOC:dph GOC:tb negative regulation of progression through meiotic cell cycle GOC:dph GOC:tb The multiplication or reproduction of myoblasts, resulting in the expansion of a myoblast cell population. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. biological_process GO:0051450 myoblast proliferation GO:0051450 The multiplication or reproduction of myoblasts, resulting in the expansion of a myoblast cell population. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. CL:0000056 GOC:ai GOC:mtg_muscle The orderly movement of a myoblast from one site to another, often during the development of a multicellular organism. A myoblast is a cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. biological_process GO:0051451 myoblast migration GO:0051451 The orderly movement of a myoblast from one site to another, often during the development of a multicellular organism. A myoblast is a cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. CL:0000056 GOC:ai GOC:mtg_muscle Any process in which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus. maintenance of nuclear protein localization maintenance of protein location in cell nucleus nuclear protein retention nuclear protein sequestering nuclear protein sequestration protein retention in nucleus protein sequestration in nucleus protein storage in nucleus protein-nuclear retention sequestration of protein in nucleus storage of protein in nucleus biological_process maintenance of protein localization in nucleus GO:0051457 maintenance of protein location in nucleus GO:0051457 Any process in which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus. GOC:ai maintenance of protein localization in nucleus GOC:dph GOC:tb The joining of the lipid bilayer membrane around a vesicle with the lipid bilayer membrane around the vacuole. GO:0042146 biological_process heterotypic vacuole fusion (non-autophagic) heterotypic vacuole fusion, non-autophagic GO:0051469 vesicle fusion with vacuole GO:0051469 The joining of the lipid bilayer membrane around a vesicle with the lipid bilayer membrane around the vacuole. GOC:ai Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures. regulation of cytoskeleton organisation biological_process regulation of cytoskeleton organization and biogenesis GO:0051493 regulation of cytoskeleton organization GO:0051493 Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures. GOC:ai regulation of cytoskeleton organisation GOC:mah regulation of cytoskeleton organization and biogenesis GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures. down regulation of cytoskeleton organization down-regulation of cytoskeleton organization downregulation of cytoskeleton organization negative regulation of cytoskeleton organisation inhibition of cytoskeleton organization biological_process negative regulation of cytoskeleton organization and biogenesis GO:0051494 negative regulation of cytoskeleton organization GO:0051494 Any process that stops, prevents, or reduces the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures. GOC:ai negative regulation of cytoskeleton organisation GOC:mah negative regulation of cytoskeleton organization and biogenesis GOC:mah Any process that activates or increases the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures. positive regulation of cytoskeleton organisation up regulation of cytoskeleton organization up-regulation of cytoskeleton organization upregulation of cytoskeleton organization activation of cytoskeleton organization stimulation of cytoskeleton organization biological_process positive regulation of cytoskeleton organization and biogenesis GO:0051495 positive regulation of cytoskeleton organization GO:0051495 Any process that activates or increases the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures. GOC:ai positive regulation of cytoskeleton organisation GOC:mah positive regulation of cytoskeleton organization and biogenesis GOC:mah Any process that modulates the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process GO:0051588 regulation of neurotransmitter transport GO:0051588 Any process that modulates the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. down regulation of neurotransmitter transport down-regulation of neurotransmitter transport downregulation of neurotransmitter transport inhibition of neurotransmitter transport biological_process GO:0051589 negative regulation of neurotransmitter transport GO:0051589 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai Any process that activates or increases the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. up regulation of neurotransmitter transport up-regulation of neurotransmitter transport upregulation of neurotransmitter transport activation of neurotransmitter transport stimulation of neurotransmitter transport biological_process GO:0051590 positive regulation of neurotransmitter transport GO:0051590 Any process that activates or increases the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai The series of events in which a stimulus is received by a cell or organism and converted into a molecular signal. stimulus detection biological_process perception of stimulus stimulus sensing GO:0051606 detection of stimulus GO:0051606 The series of events in which a stimulus is received by a cell or organism and converted into a molecular signal. GOC:add GOC:ai GOC:dph GOC:mah The directed movement of norepinephrine into a cell, typically presynaptic neurons or glial cells. Norepinephrine (3,4-dihydroxyphenyl-2-aminoethanol) is a hormone secreted by the adrenal medulla and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts of the CNS. It is also the biosynthetic precursor of epinephrine. levarterenol reuptake levarterenol uptake noradrenaline reuptake noradrenaline uptake norepinephrine import norepinephrine reuptake biological_process GO:0051620 norepinephrine uptake GO:0051620 The directed movement of norepinephrine into a cell, typically presynaptic neurons or glial cells. Norepinephrine (3,4-dihydroxyphenyl-2-aminoethanol) is a hormone secreted by the adrenal medulla and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts of the CNS. It is also the biosynthetic precursor of epinephrine. GOC:ai norepinephrine import GOC:dph GOC:tb Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter norepinephrine into a cell. regulation of levarterenol uptake regulation of noradrenaline uptake regulation of norepinephrine import biological_process GO:0051621 regulation of norepinephrine uptake GO:0051621 Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter norepinephrine into a cell. GOC:ai regulation of norepinephrine import GOC:dph GOC:tb Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of norepinephrine into a cell. down regulation of norepinephrine uptake down-regulation of norepinephrine uptake downregulation of norepinephrine uptake negative regulation of levarterenol uptake negative regulation of noradrenaline uptake negative regulation of norepinephrine import biological_process GO:0051622 negative regulation of norepinephrine uptake GO:0051622 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of norepinephrine into a cell. GOC:ai negative regulation of norepinephrine import GOC:dph GOC:tb Any process that activates or increases the frequency, rate or extent of the directed movement of norepinephrine into a cell. positive regulation of levarterenol uptake positive regulation of noradrenaline uptake positive regulation of norepinephrine import up regulation of norepinephrine uptake up-regulation of norepinephrine uptake upregulation of norepinephrine uptake activation of norepinephrine uptake stimulation of norepinephrine uptake biological_process GO:0051623 positive regulation of norepinephrine uptake GO:0051623 Any process that activates or increases the frequency, rate or extent of the directed movement of norepinephrine into a cell. GOC:ai positive regulation of norepinephrine import GOC:dph GOC:tb The directed movement of acetylcholine into a cell, typically presynaptic neurons or glial cells. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues. acetylcholine import biological_process GO:0051630 acetylcholine uptake GO:0051630 The directed movement of acetylcholine into a cell, typically presynaptic neurons or glial cells. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues. GOC:ai acetylcholine import GOC:dph GOC:tb Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter acetylcholine into a cell. regulation of acetylcholine import biological_process GO:0051631 regulation of acetylcholine uptake GO:0051631 Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter acetylcholine into a cell. GOC:ai regulation of acetylcholine import GOC:dph GOC:tb Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of acetylcholine into a cell. down regulation of acetylcholine uptake down-regulation of acetylcholine uptake downregulation of acetylcholine uptake negative regulation of acetylcholine import biological_process GO:0051632 negative regulation of acetylcholine uptake GO:0051632 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of acetylcholine into a cell. GOC:ai negative regulation of acetylcholine import GOC:dph GOC:tb Any process that activates or increases the frequency, rate or extent of the directed movement of acetylcholine into a cell. positive regulation of acetylcholine import up regulation of acetylcholine uptake up-regulation of acetylcholine uptake upregulation of acetylcholine uptake activation of acetylcholine uptake stimulation of acetylcholine uptake biological_process GO:0051633 positive regulation of acetylcholine uptake GO:0051633 Any process that activates or increases the frequency, rate or extent of the directed movement of acetylcholine into a cell. GOC:ai positive regulation of acetylcholine import GOC:dph GOC:tb Any process in which an organelle is transported to, and/or maintained in, a specific location. establishment and maintenance of organelle localization organelle localisation biological_process GO:0051640 organelle localization GO:0051640 Any process in which an organelle is transported to, and/or maintained in, a specific location. GOC:ai organelle localisation GOC:mah A cellular localization process whereby a substance or cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in, a specific location within a cell including the localization of substances or cellular entities to the cell membrane. jl 2013-12-18T14:04:32Z GO:1902580 cellular localisation establishment and maintenance of cellular localization establishment and maintenance of localization in cell or cell membrane single organism cellular localization intracellular localization localization within cell biological_process single-organism cellular localization GO:0051641 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. cellular localization GO:0051641 A cellular localization process whereby a substance or cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in, a specific location within a cell including the localization of substances or cellular entities to the cell membrane. GOC:tb GOC:vw cellular localisation GOC:mah single organism cellular localization GOC:TermGenie Any process in which the Golgi is transported to, and/or maintained in, a specific location within the cell. Golgi apparatus localization Golgi body localization Golgi localisation establishment and maintenance of Golgi localization biological_process GO:0051645 Golgi localization GO:0051645 Any process in which the Golgi is transported to, and/or maintained in, a specific location within the cell. GOC:ai Golgi localisation GOC:mah Any process in which the nucleus is transported to, and/or maintained in, a specific location within the cell. cell nucleus localization establishment and maintenance of nucleus localization localization of nucleus nucleus localisation biological_process GO:0051647 nucleus localization GO:0051647 Any process in which the nucleus is transported to, and/or maintained in, a specific location within the cell. GOC:ai nucleus localisation GOC:mah Any process in which a vesicle or vesicles are transported to, and/or maintained in, a specific location. cytoplasmic vesicle localization establishment and maintenance of vesicle localization vesicle localisation biological_process GO:0051648 vesicle localization GO:0051648 Any process in which a vesicle or vesicles are transported to, and/or maintained in, a specific location. GOC:ai vesicle localisation GOC:mah Any process, occurring in a cell, that localizes a substance or cellular component. This may occur via movement, tethering or selective degradation. establishment of localisation in cell establishment of intracellular localization establishment of localization within cell positioning within cell biological_process establishment of cellular localization GO:0051649 establishment of localization in cell GO:0051649 Any process, occurring in a cell, that localizes a substance or cellular component. This may occur via movement, tethering or selective degradation. GOC:ai GOC:dos GOC:dph GOC:tb establishment of localisation in cell GOC:mah establishment of cellular localization GOC:dph GOC:tb The directed movement of a vesicle to a specific location. establishment of vesicle localisation biological_process GO:0051650 establishment of vesicle localization GO:0051650 The directed movement of a vesicle to a specific location. GOC:ai establishment of vesicle localisation GOC:mah Any process in which a substance or cellular entity, such as a protein complex or organelle, is maintained in a specific location within, or in the membrane of, a cell, and is prevented from moving elsewhere. cellular retention cellular sequestering cellular storage intracellular retention intracellular sequestering intracellular storage maintenance of intracellular localization maintenance of localization within cell retention within cell sequestering within cell storage within cell biological_process maintenance of cellular localization maintenance of localization in cell GO:0051651 maintenance of location in cell GO:0051651 Any process in which a substance or cellular entity, such as a protein complex or organelle, is maintained in a specific location within, or in the membrane of, a cell, and is prevented from moving elsewhere. GOC:ai maintenance of cellular localization GOC:dph GOC:tb maintenance of localization in cell GOC:dph GOC:tb Any process in which a chromosome is maintained in a specific location within a cell and prevented from moving elsewhere. biological_process maintenance of chromosome localization GO:0051652 maintenance of chromosome location GO:0051652 Any process in which a chromosome is maintained in a specific location within a cell and prevented from moving elsewhere. GOC:ai GOC:dph GOC:tb maintenance of chromosome localization GOC:dph GOC:tb Any process in which a vesicle is maintained in a specific location within a cell and prevented from moving elsewhere. biological_process maintenance of vesicle localization GO:0051655 maintenance of vesicle location GO:0051655 Any process in which a vesicle is maintained in a specific location within a cell and prevented from moving elsewhere. GOC:ai GOC:dph GOC:tb maintenance of vesicle localization GOC:dph GOC:tb The directed movement of an organelle to a specific location. establishment of organelle localisation biological_process GO:0051656 establishment of organelle localization GO:0051656 The directed movement of an organelle to a specific location. GOC:ai establishment of organelle localisation GOC:mah Any process in which an organelle is maintained in a specific location within a cell and prevented from moving elsewhere. biological_process maintenance of organelle localization GO:0051657 maintenance of organelle location GO:0051657 Any process in which an organelle is maintained in a specific location within a cell and prevented from moving elsewhere. GOC:ai GOC:dph GOC:tb maintenance of organelle localization GOC:dph GOC:tb Any process in which the nucleus is maintained in a specific location within a cell and prevented from moving elsewhere. maintenance of cell nucleus location biological_process maintenance of nucleus localization GO:0051658 maintenance of nucleus location GO:0051658 Any process in which the nucleus is maintained in a specific location within a cell and prevented from moving elsewhere. GOC:ai GOC:dph GOC:tb maintenance of nucleus localization GOC:dph GOC:tb Any process in which a substance or cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in, a specific location within a membrane. establishment and maintenance of localization in membrane establishment and maintenance of position in membrane localisation within membrane localization to membrane positioning within membrane biological_process GO:0051668 localization within membrane GO:0051668 Any process in which a substance or cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in, a specific location within a membrane. GOC:ai localisation within membrane GOC:mah Any process in which a cell is transported to, and/or maintained in, a specific location. cell localization establishment and maintenance of cell localization establishment and maintenance of localization of cell localisation of cell biological_process GO:0051674 localization of cell GO:0051674 Any process in which a cell is transported to, and/or maintained in, a specific location. GOC:ai localisation of cell GOC:mah The directed movement of the Golgi to a specific location. establishment of Golgi apparatus localization establishment of Golgi body localization establishment of Golgi localisation biological_process GO:0051683 establishment of Golgi localization GO:0051683 The directed movement of the Golgi to a specific location. GOC:ai establishment of Golgi localisation GOC:mah Any process in which the Golgi is maintained in a specific location within a cell and prevented from moving elsewhere. maintenance of Golgi apparatus localization maintenance of Golgi body localization biological_process maintenance of Golgi localization GO:0051684 maintenance of Golgi location GO:0051684 Any process in which the Golgi is maintained in a specific location within a cell and prevented from moving elsewhere. GOC:ai GOC:dph GOC:tb maintenance of Golgi localization GOC:dph GOC:tb Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism. GO:0009613 GO:0042828 biological_process GO:0051707 response to other organism GO:0051707 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism. GOC:ai Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. The process begins with detection of the stimulus by a cell and ends with a change in state or activity or the cell. Reactome:R-HSA-8953897 biological_process GO:0051716 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. cellular response to stimulus GO:0051716 Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. The process begins with detection of the stimulus by a cell and ends with a change in state or activity or the cell. GOC:bf GOC:jl Reactome:R-HSA-8953897 Cellular responses to stimuli Any process that modulates the rate or extent of progression through the cell cycle. GO:0000074 GO:0007050 GO:0071156 GO:0071157 GO:0071158 GO:0071850 Reactome:R-HSA-156711 Reactome:R-HSA-380972 cell cycle modulation cell cycle regulation control of cell cycle progression modulation of cell cycle progression regulation of cell cycle progression regulation of progression through cell cycle arrest of mitotic cell cycle progression cell cycle arrest mitotic cell cycle arrest negative regulation of cell cycle arrest positive regulation of cell cycle arrest regulation of cell cycle arrest biological_process cell cycle regulator tumor suppressor GO:0051726 regulation of cell cycle GO:0051726 Any process that modulates the rate or extent of progression through the cell cycle. GOC:ai GOC:dph GOC:tb Reactome:R-HSA-156711 Polo-like kinase mediated events Reactome:R-HSA-380972 Energy dependent regulation of mTOR by LKB1-AMPK arrest of mitotic cell cycle progression GOC:mah Any process that activates or increases the frequency, rate or extent of cell division. up regulation of cell division up-regulation of cell division upregulation of cell division activation of cell division stimulation of cell division biological_process GO:0051781 positive regulation of cell division GO:0051781 Any process that activates or increases the frequency, rate or extent of cell division. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of cell division. down regulation of cell division down-regulation of cell division downregulation of cell division inhibition of cell division biological_process GO:0051782 negative regulation of cell division GO:0051782 Any process that stops, prevents, or reduces the frequency, rate or extent of cell division. GOC:ai Any process that modulates the frequency, rate or extent of nuclear division, the partitioning of the nucleus and its genetic information. biological_process GO:0051783 regulation of nuclear division GO:0051783 Any process that modulates the frequency, rate or extent of nuclear division, the partitioning of the nucleus and its genetic information. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of nuclear division, the partitioning of the nucleus and its genetic information. down regulation of nuclear division down-regulation of nuclear division downregulation of nuclear division inhibition of nuclear division biological_process GO:0051784 negative regulation of nuclear division GO:0051784 Any process that stops, prevents, or reduces the frequency, rate or extent of nuclear division, the partitioning of the nucleus and its genetic information. GOC:ai Any process that activates or increases the frequency, rate or extent of nuclear division, the partitioning of the nucleus and its genetic information. up regulation of nuclear division up-regulation of nuclear division upregulation of nuclear division activation of nuclear division stimulation of nuclear division biological_process GO:0051785 positive regulation of nuclear division GO:0051785 Any process that activates or increases the frequency, rate or extent of nuclear division, the partitioning of the nucleus and its genetic information. GOC:ai Any process in which a pigment granule is transported to, and/or maintained in, a specific location within the cell. pigment granule localisation biological_process GO:0051875 pigment granule localization GO:0051875 Any process in which a pigment granule is transported to, and/or maintained in, a specific location within the cell. GOC:ai pigment granule localisation GOC:mah Any process that modulates the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. biological_process GO:0051890 regulation of cardioblast differentiation GO:0051890 Any process that modulates the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. GOC:ai Any process that activates or increases the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. up regulation of cardioblast differentiation up-regulation of cardioblast differentiation upregulation of cardioblast differentiation activation of cardioblast differentiation stimulation of cardioblast differentiation biological_process GO:0051891 positive regulation of cardioblast differentiation GO:0051891 Any process that activates or increases the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. down regulation of cardioblast differentiation down-regulation of cardioblast differentiation downregulation of cardioblast differentiation inhibition of cardioblast differentiation biological_process GO:0051892 negative regulation of cardioblast differentiation GO:0051892 Any process that stops, prevents, or reduces the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. GOC:ai The directed movement of pigment granules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. pigment granule translocation biological_process GO:0051904 pigment granule transport GO:0051904 The directed movement of pigment granules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai The directed movement of a pigment granule to a specific location. establishment of pigment granule localisation biological_process GO:0051905 establishment of pigment granule localization GO:0051905 The directed movement of a pigment granule to a specific location. GOC:ai establishment of pigment granule localisation GOC:mah Any process that modulates the frequency, rate or extent of the sensory perception of pain, the series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. biological_process GO:0051930 regulation of sensory perception of pain GO:0051930 Any process that modulates the frequency, rate or extent of the sensory perception of pain, the series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. GOC:ai Any process that modulates the frequency, rate or extent of sensory perception, the series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal. biological_process GO:0051931 regulation of sensory perception GO:0051931 Any process that modulates the frequency, rate or extent of sensory perception, the series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal. GOC:ai The directed movement of catecholamines, a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine. biological_process GO:0051937 catecholamine transport GO:0051937 The directed movement of catecholamines, a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine. GOC:ai ISBN:0198506732 Any process that modulates the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process GO:0051952 regulation of amine transport GO:0051952 Any process that modulates the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. down regulation of amine transport down-regulation of amine transport downregulation of amine transport inhibition of amine transport biological_process GO:0051953 negative regulation of amine transport GO:0051953 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. up regulation of amine transport up-regulation of amine transport upregulation of amine transport activation of amine transport stimulation of amine transport biological_process GO:0051954 positive regulation of amine transport GO:0051954 Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai Any process that modulates the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. biological_process GO:0051955 regulation of amino acid transport GO:0051955 Any process that modulates the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. down regulation of amino acid transport down-regulation of amino acid transport downregulation of amino acid transport negative regulation of amino acid transmembrane transport inhibition of amino acid transport biological_process GO:0051956 negative regulation of amino acid transport GO:0051956 Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai negative regulation of amino acid transmembrane transport GOC:mah Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. positive regulation of amino acid transmembrane transport up regulation of amino acid transport up-regulation of amino acid transport upregulation of amino acid transport activation of amino acid transport stimulation of amino acid transport biological_process GO:0051957 positive regulation of amino acid transport GO:0051957 Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:ai positive regulation of amino acid transmembrane transport GOC:mah Any process that modulates the frequency, rate or extent of nervous system development, the origin and formation of nervous tissue. biological_process GO:0051960 regulation of nervous system development GO:0051960 Any process that modulates the frequency, rate or extent of nervous system development, the origin and formation of nervous tissue. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of nervous system development, the origin and formation of nervous tissue. down regulation of nervous system development down-regulation of nervous system development downregulation of nervous system development inhibition of nervous system development biological_process GO:0051961 negative regulation of nervous system development GO:0051961 Any process that stops, prevents, or reduces the frequency, rate or extent of nervous system development, the origin and formation of nervous tissue. GOC:ai Any process that activates, maintains or increases the frequency, rate or extent of nervous system development, the origin and formation of nervous tissue. up regulation of nervous system development up-regulation of nervous system development upregulation of nervous system development activation of nervous system development stimulation of nervous system development biological_process GO:0051962 positive regulation of nervous system development GO:0051962 Any process that activates, maintains or increases the frequency, rate or extent of nervous system development, the origin and formation of nervous tissue. GOC:ai Any process that modulates the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse. regulation of synapse biogenesis regulation of synaptogenesis biological_process GO:0051963 regulation of synapse assembly GO:0051963 Any process that modulates the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse. GOC:ai GOC:pr Any process that stops, prevents, or reduces the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse. down regulation of synapse assembly down-regulation of synapse assembly downregulation of synapse assembly negative regulation of synapse biogenesis negative regulation of synaptogenesis inhibition of synapse assembly biological_process GO:0051964 negative regulation of synapse assembly GO:0051964 Any process that stops, prevents, or reduces the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse. GOC:ai GOC:pr Any process that activates, maintains or increases the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse. positive regulation of synapse biogenesis positive regulation of synaptogenesis up regulation of synapse assembly up-regulation of synapse assembly upregulation of synapse assembly activation of synapse assembly stimulation of synapse assembly biological_process GO:0051965 positive regulation of synapse assembly GO:0051965 Any process that activates, maintains or increases the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse. GOC:ai GOC:pr Any process that modulates the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation. regulation of conduction of nerve impulse biological_process GO:0051969 regulation of transmission of nerve impulse GO:0051969 Any process that modulates the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation. GOC:ai regulation of conduction of nerve impulse GOC:dph Any process that stops, prevents, or reduces the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation. down regulation of transmission of nerve impulse down-regulation of transmission of nerve impulse downregulation of transmission of nerve impulse negative regulation of conduction of nerve impulse inhibition of transmission of nerve impulse biological_process GO:0051970 negative regulation of transmission of nerve impulse GO:0051970 Any process that stops, prevents, or reduces the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation. GOC:ai negative regulation of conduction of nerve impulse GOC:dph Any process that activates, maintains or increases the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation. positive regulation of conduction of nerve impulse up regulation of transmission of nerve impulse up-regulation of transmission of nerve impulse upregulation of transmission of nerve impulse activation of transmission of nerve impulse stimulation of transmission of nerve impulse biological_process GO:0051971 positive regulation of transmission of nerve impulse GO:0051971 Any process that activates, maintains or increases the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation. GOC:ai positive regulation of conduction of nerve impulse GOC:dph Any process that modulates the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets. biological_process GO:0051983 regulation of chromosome segregation GO:0051983 Any process that modulates the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets. GOC:ai Any process that activates or increases the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets. up regulation of chromosome segregation up-regulation of chromosome segregation upregulation of chromosome segregation activation of chromosome segregation stimulation of chromosome segregation biological_process GO:0051984 positive regulation of chromosome segregation GO:0051984 Any process that activates or increases the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets. GOC:ai Any process that stops, prevents, or reduces the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets. down regulation of chromosome segregation down-regulation of chromosome segregation downregulation of chromosome segregation inhibition of chromosome segregation biological_process GO:0051985 negative regulation of chromosome segregation GO:0051985 Any process that stops, prevents, or reduces the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets. GOC:ai The process whose specific outcome is the progression of a muscle cell over time, from its formation to the mature structure. Muscle cell development does not include the steps involved in committing an unspecified cell to the muscle cell fate. GO:0048747 muscle fiber development muscle fibre development myofiber development myofibre development biological_process GO:0055001 muscle cell development GO:0055001 The process whose specific outcome is the progression of a muscle cell over time, from its formation to the mature structure. Muscle cell development does not include the steps involved in committing an unspecified cell to the muscle cell fate. CL:0000187 GOC:devbiol The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle. biological_process GO:0055002 striated muscle cell development GO:0055002 The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle. CL:0000737 GOC:devbiol The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells. cardiac myofibril development cardiac myofibril morphogenesis biological_process heart myofibril assembly GO:0055003 cardiac myofibril assembly GO:0055003 The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells. GOC:devbiol The process whose specific outcome is the progression of a cardiac cell over time, from its formation to the mature state. A cardiac cell is a cell that will form part of the cardiac organ of an individual. cardiocyte development biological_process heart cell development GO:0055006 cardiac cell development GO:0055006 The process whose specific outcome is the progression of a cardiac cell over time, from its formation to the mature state. A cardiac cell is a cell that will form part of the cardiac organ of an individual. GOC:devbiol cardiocyte development GOC:dph The process in which a cardiac muscle precursor cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. cardiomyocyte differentiation biological_process heart muscle cell differentiation GO:0055007 cardiac muscle cell differentiation GO:0055007 The process in which a cardiac muscle precursor cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. GOC:devbiol GOC:mtg_heart The process in which the anatomical structures of cardiac muscle tissue are generated and organized. myocardium morphogenesis heart muscle morphogenesis biological_process GO:0055008 cardiac muscle tissue morphogenesis GO:0055008 The process in which the anatomical structures of cardiac muscle tissue are generated and organized. GOC:devbiol myocardium morphogenesis GOC:mtg_heart The process in which the anatomical structure of cardiac atrium muscle is generated and organized. atrial heart muscle morphogenesis atrial myocardium morphogenesis cardiac atrium muscle morphogenesis biological_process GO:0055009 atrial cardiac muscle tissue morphogenesis GO:0055009 The process in which the anatomical structure of cardiac atrium muscle is generated and organized. GOC:devbiol atrial myocardium morphogenesis GOC:mtg_heart The process in which the anatomical structures of cardiac ventricle muscle is generated and organized. cardiac ventricle muscle morphogenesis ventricular heart muscle morphogenesis biological_process GO:0055010 ventricular cardiac muscle tissue morphogenesis GO:0055010 The process in which the anatomical structures of cardiac ventricle muscle is generated and organized. GOC:devbiol The process whose specific outcome is the progression of a cardiac muscle cell over time, from its formation to the mature state. GO:0048739 cardiac muscle fiber development cardiac muscle fibre development cardiomyocyte cell development heart muscle cell development biological_process heart muscle fiber development GO:0055013 cardiac muscle cell development GO:0055013 The process whose specific outcome is the progression of a cardiac muscle cell over time, from its formation to the mature state. GOC:devbiol GOC:mtg_heart cardiomyocyte cell development GOC:mtg_muscle The increase in size or mass of a cardiac muscle, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another. heart muscle growth biological_process GO:0055017 cardiac muscle tissue growth GO:0055017 The increase in size or mass of a cardiac muscle, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another. GOC:devbiol Any process that modulates the frequency, rate or extent of cardiac muscle fiber development. regulation of cardiac muscle fibre development regulation of heart muscle fiber development biological_process GO:0055018 regulation of cardiac muscle fiber development GO:0055018 Any process that modulates the frequency, rate or extent of cardiac muscle fiber development. GOC:vk Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle fiber development. down regulation of cardiac muscle fiber development down-regulation of cardiac muscle fiber development downregulation of cardiac muscle fiber development negative regulation of cardiac muscle fibre development inhibition of cardiac muscle fiber development biological_process negative regulation of heart muscle fiber development GO:0055019 negative regulation of cardiac muscle fiber development GO:0055019 Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle fiber development. GOC:vk Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle fiber development. positive regulation of cardiac muscle fibre development positive regulation of heart muscle fiber development up regulation of cardiac muscle fiber development up-regulation of cardiac muscle fiber development upregulation of cardiac muscle fiber development activation of cardiac muscle fiber development stimulation of cardiac muscle fiber development biological_process GO:0055020 positive regulation of cardiac muscle fiber development GO:0055020 Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle fiber development. GOC:vk Any process that modulates the frequency, rate or extent of cardiac muscle growth. biological_process GO:0055021 regulation of cardiac muscle tissue growth GO:0055021 Any process that modulates the frequency, rate or extent of cardiac muscle growth. GOC:vk Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle growth. down regulation of cardiac muscle growth down-regulation of cardiac muscle growth downregulation of cardiac muscle growth inhibition of cardiac muscle growth biological_process negative regulation of heart muscle growth GO:0055022 negative regulation of cardiac muscle tissue growth GO:0055022 Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle growth. GOC:vk Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle growth. positive regulation of heart muscle growth up regulation of cardiac muscle growth up-regulation of cardiac muscle growth upregulation of cardiac muscle growth activation of cardiac muscle growth stimulation of cardiac muscle growth biological_process GO:0055023 positive regulation of cardiac muscle tissue growth GO:0055023 Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle growth. GOC:vk Any process that modulates the frequency, rate or extent of cardiac muscle tissue development. regulation of heart muscle development biological_process GO:0055024 regulation of cardiac muscle tissue development GO:0055024 Any process that modulates the frequency, rate or extent of cardiac muscle tissue development. GOC:vk Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle tissue development. positive regulation of heart muscle development up regulation of cardiac muscle development up-regulation of cardiac muscle development upregulation of cardiac muscle development activation of cardiac muscle development stimulation of cardiac muscle development biological_process GO:0055025 positive regulation of cardiac muscle tissue development GO:0055025 Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle tissue development. GOC:vk Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle tissue development. down regulation of cardiac muscle development down-regulation of cardiac muscle development downregulation of cardiac muscle development negative regulation of heart muscle development inhibition of cardiac muscle development biological_process GO:0055026 negative regulation of cardiac muscle tissue development GO:0055026 Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle tissue development. GOC:vk The process resulting in the physical partitioning and separation of a neuroblast into daughter cells. A neuroblast is any cell that will divide and give rise to a neuron. neuroblast cell division biological_process GO:0055057 neuroblast division GO:0055057 The process resulting in the physical partitioning and separation of a neuroblast into daughter cells. A neuroblast is any cell that will divide and give rise to a neuron. PMID:11163136 PMID:11250167 The process resulting in the physical partitioning and separation of a neuroblast into two daughter cells with different developmental potentials. biological_process GO:0055059 asymmetric neuroblast division GO:0055059 The process resulting in the physical partitioning and separation of a neuroblast into two daughter cells with different developmental potentials. GOC:dph The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. tb 2015-10-21T13:22:47Z GO:0090662 Reactome:R-HSA-382556 Reactome:R-HSA-425407 Reactome:R-HSA-5223345 membrane transport ATP hydrolysis coupled transmembrane transport biological_process GO:0055085 Transmembrane transport is the transport of a solute across a lipid bilayer. Note that transport through the nuclear pore complex is not transmembrane because the nuclear membrane is a double membrane and is not traversed. For transport through the nuclear pore, consider instead the term 'nucleocytoplasmic transport ; GO:0006913' and its children. Note also that this term is not intended for use in annotating lateral movement within membranes. transmembrane transport GO:0055085 The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. GOC:dph GOC:jid Reactome:R-HSA-382556 ABC-family proteins mediated transport Reactome:R-HSA-425407 SLC-mediated transmembrane transport Reactome:R-HSA-5223345 Miscellaneous transport and binding events The cellular chemical reactions and pathways involving a nucleobase-containing small molecule: a nucleobase, a nucleoside, or a nucleotide. Reactome:R-HSA-15869 Reactome:R-HSA-2393930 nucleobase, nucleoside and nucleotide metabolism biological_process nucleobase, nucleoside and nucleotide metabolic process GO:0055086 nucleobase-containing small molecule metabolic process GO:0055086 The cellular chemical reactions and pathways involving a nucleobase-containing small molecule: a nucleobase, a nucleoside, or a nucleotide. GOC:vw Reactome:R-HSA-15869 Metabolism of nucleotides Reactome:R-HSA-2393930 Phosphate bond hydrolysis by NUDT proteins The directed movement of proteins from the Golgi to a secretory granule. The secretory granule is a membrane-bounded particle, usually protein, formed in the granular endoplasmic reticulum and the Golgi complex. biological_process GO:0055107 Golgi to secretory granule transport GO:0055107 The directed movement of proteins from the Golgi to a secretory granule. The secretory granule is a membrane-bounded particle, usually protein, formed in the granular endoplasmic reticulum and the Golgi complex. GOC:curators The directed movement of proteins from the Golgi to a transport vesicle. Continuously secreted proteins are sorted into transport vesicles that fuse with the plasma membrane, releasing their contents by exocytosis. biological_process GO:0055108 Golgi to transport vesicle transport GO:0055108 The directed movement of proteins from the Golgi to a transport vesicle. Continuously secreted proteins are sorted into transport vesicles that fuse with the plasma membrane, releasing their contents by exocytosis. GOC:jid Any process that modulates the frequency, rate or extent of cardiac muscle contraction. biological_process GO:0055117 regulation of cardiac muscle contraction GO:0055117 Any process that modulates the frequency, rate or extent of cardiac muscle contraction. GOC:ecd Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle contraction. biological_process GO:0055118 negative regulation of cardiac muscle contraction GO:0055118 Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle contraction. GOC:ecd The process whose specific outcome is the progression of the digestive system over time, from its formation to the mature structure. The digestive system is the entire structure in which digestion takes place. Digestion is all of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. biological_process GO:0055123 digestive system development GO:0055123 The process whose specific outcome is the progression of the digestive system over time, from its formation to the mature structure. The digestive system is the entire structure in which digestion takes place. Digestion is all of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. GOC:jid The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the structure it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear. biological_process GO:0060037 pharyngeal system development GO:0060037 The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the structure it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear. GOC:dph The expansion of a cardiac muscle cell population by cell division. cardiac myocyte proliferation heart muscle cell proliferation biological_process cardiomyocyte proliferation GO:0060038 cardiac muscle cell proliferation GO:0060038 The expansion of a cardiac muscle cell population by cell division. GOC:dph GOC:rph PMID:11161571 cardiomyocyte proliferation GOC:dph PMID:10074473 The process whose specific outcome is the progression of the pericardium over time, from its formation to the mature structure. The pericardium is a double-walled sac that contains the heart and the roots of the aorta, vena cava and the pulmonary artery. biological_process GO:0060039 pericardium development GO:0060039 The process whose specific outcome is the progression of the pericardium over time, from its formation to the mature structure. The pericardium is a double-walled sac that contains the heart and the roots of the aorta, vena cava and the pulmonary artery. GOC:dph GOC:rph PMID:15138308 PMID:16376438 The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. GO:0002073 retina development in camera-style eye biological_process retinal development GO:0060041 retina development in camera-type eye GO:0060041 The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. GOC:bf GOC:dph ISBN:0815340729 retinal development GOC:dph GOC:tb The process in which the anatomical structure of the retina is generated and organized. retina morphogenesis in camera-style eye retinogenesis biological_process GO:0060042 retina morphogenesis in camera-type eye GO:0060042 The process in which the anatomical structure of the retina is generated and organized. GOC:bf GOC:dph GOC:mtg_sensu Any process that modulates the frequency, rate or extent of cardiac muscle cell proliferation. regulation of heart muscle cell proliferation biological_process regulation of cardiomyocyte proliferation GO:0060043 regulation of cardiac muscle cell proliferation GO:0060043 Any process that modulates the frequency, rate or extent of cardiac muscle cell proliferation. GOC:dph GOC:rph regulation of cardiomyocyte proliferation GOC:dph Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle cell proliferation. negative regulation of heart muscle cell proliferation biological_process GO:0060044 negative regulation of cardiac muscle cell proliferation GO:0060044 Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle cell proliferation. GOC:dph GOC:rph Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation. biological_process positive regulation of heart muscle cell proliferation GO:0060045 positive regulation of cardiac muscle cell proliferation GO:0060045 Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation. GOC:dph GOC:rph The multicellular organismal process in which the heart decreases in volume in a characteristic way to propel blood through the body. heart beating biological_process cardiac contraction hemolymph circulation GO:0060047 heart contraction GO:0060047 The multicellular organismal process in which the heart decreases in volume in a characteristic way to propel blood through the body. GOC:dph Muscle contraction of cardiac muscle tissue. heart muscle contraction biological_process GO:0060048 cardiac muscle contraction GO:0060048 Muscle contraction of cardiac muscle tissue. GOC:dph The regulated release of serotonin by a cell, in which released serotonin acts as a neurotransmitter. biological_process serotonin release, neurotransmission GO:0060096 serotonin secretion, neurotransmission GO:0060096 The regulated release of serotonin by a cell, in which released serotonin acts as a neurotransmitter. GOC:dph serotonin release, neurotransmission GOC:tb A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother. biological_process GO:0060136 embryonic process involved in female pregnancy GO:0060136 A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother. GOC:dph Any process that modulates the frequency, rate or extent of the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells. biological_process GO:0060142 regulation of syncytium formation by plasma membrane fusion GO:0060142 Any process that modulates the frequency, rate or extent of the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells. GOC:dph Any process that increases the frequency, rate or extent of the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells. biological_process GO:0060143 positive regulation of syncytium formation by plasma membrane fusion GO:0060143 Any process that increases the frequency, rate or extent of the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells. GOC:dph The portion of the plasma membrane surrounding a cilium. GO:0020017 cilial membrane cilium membrane flagellar membrane flagellum membrane cellular_component GO:0060170 Note that cilia and eukaryotic flagella are deemed to be equivalent. ciliary membrane GO:0060170 The portion of the plasma membrane surrounding a cilium. GOC:cilia GOC:dph GOC:rph The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. Examples include legs, arms or some types of fin. Wikipedia:Limb_development paired limb/fin development limb bud development biological_process GO:0060173 limb development GO:0060173 The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. Examples include legs, arms or some types of fin. GOC:dgh GOC:dph PMID:11487378 limb bud development GOC:dph Formation of the endocardium of the heart. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers. biological_process GO:0060214 endocardium formation GO:0060214 Formation of the endocardium of the heart. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers. GOC:bf GOC:dph PMID:17722983 The process in which a relatively unspecialized cell acquires specialized features of a hematopoietic stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. haematopoietic stem cell differentiation haemopoietic stem cell differentiation hemopoietic stem cell differentiation biological_process GO:0060218 hematopoietic stem cell differentiation GO:0060218 The process in which a relatively unspecialized cell acquires specialized features of a hematopoietic stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. GOC:BHF GOC:bf GOC:dph GOC:rl PMID:15378083 The process in which a relatively unspecialized cell acquires the specialized features of a photoreceptor cell in a camera-type eye. biological_process GO:0060219 camera-type eye photoreceptor cell differentiation GO:0060219 The process in which a relatively unspecialized cell acquires the specialized features of a photoreceptor cell in a camera-type eye. GOC:ascb_2009 GOC:dph GOC:tb The process in which a relatively unspecialized cell acquires the specialized features of a retinal rod cell. biological_process GO:0060221 retinal rod cell differentiation GO:0060221 The process in which a relatively unspecialized cell acquires the specialized features of a retinal rod cell. GOC:dph A transition where a mesenchymal cell establishes apical/basolateral polarity, forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell. epithelial cell differentiation from mesenchymal cell mesenchymal-epithelial transition biological_process GO:0060231 mesenchymal to epithelial transition GO:0060231 A transition where a mesenchymal cell establishes apical/basolateral polarity, forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell. GOC:ascb_2009 GOC:dph GOC:tb epithelial cell differentiation from mesenchymal cell GOC:BHF GOC:dph GOC:rl mesenchymal-epithelial transition GOC:dph Any process that modulates the frequency, rate or extent of glial cell proliferation. biological_process GO:0060251 regulation of glial cell proliferation GO:0060251 Any process that modulates the frequency, rate or extent of glial cell proliferation. GOC:dph GOC:tb Any process that activates or increases the rate or extent of glial cell proliferation. biological_process GO:0060252 positive regulation of glial cell proliferation GO:0060252 Any process that activates or increases the rate or extent of glial cell proliferation. GOC:dph GOC:sl GOC:tb Any process that stops or decreases the rate or extent of glial cell proliferation. biological_process GO:0060253 negative regulation of glial cell proliferation GO:0060253 Any process that stops or decreases the rate or extent of glial cell proliferation. GOC:dph GOC:sl GOC:tb Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. biological_process GO:0060255 regulation of macromolecule metabolic process GO:0060255 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. GOC:dph GOC:tb The assembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole. GO:0042384 Reactome:R-HSA-5617833 ciliogenesis cilium formation microtubule-based flagellum assembly biological_process cilium biogenesis cilium morphogenesis cilium organization GO:0060271 Note that we deem cilium and microtubule-based flagellum to be equivalent. cilium assembly GO:0060271 The assembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole. GOC:BHF GOC:cilia GOC:dph GOC:kmv GOC:pr GOC:vw ISBN:0198506732 PMID:13978319 PMID:27350441 Reactome:R-HSA-5617833 Cilium Assembly cilium biogenesis GOC:mah cilium organization GOC:dph Any process that modulates the rate or extent of the process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. biological_process GO:0060281 regulation of oocyte development GO:0060281 Any process that modulates the rate or extent of the process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. GOC:dph GOC:tb PMID:2394318 Any process that increases the rate or extent of the process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. biological_process GO:0060282 positive regulation of oocyte development GO:0060282 Any process that increases the rate or extent of the process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. GOC:dph GOC:tb Any process that decreases the rate or extent of the process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. biological_process GO:0060283 negative regulation of oocyte development GO:0060283 Any process that decreases the rate or extent of the process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. GOC:dph GOC:tb Any process that modulates the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate. biological_process GO:0060284 regulation of cell development GO:0060284 Any process that modulates the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate. GOC:dph GOC:tb Cell motility due to the motion of one or more eukaryotic cilia. A eukaryotic cilium is a specialized organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole. GO:0071974 cilium cell motility microtubule-based flagellar cell motility biological_process ciliary cell motility GO:0060285 Note that we deem eukaryotic cilia and microtubule-based flagella to be equivalent. cilium-dependent cell motility GO:0060285 Cell motility due to the motion of one or more eukaryotic cilia. A eukaryotic cilium is a specialized organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole. GOC:cilia GOC:dgh GOC:dph GOC:krc GOC:mlg GOC:mtg_cambridge_2013 Movement of cilia mediated by motor proteins that contributes to the movement of a cell. biological_process GO:0060294 cilium movement involved in cell motility GO:0060294 Movement of cilia mediated by motor proteins that contributes to the movement of a cell. GOC:BHF GOC:dph GOC:tb Any process that modulates the rate frequency or extent of cilium movement involved in ciliary motility. biological_process GO:0060295 regulation of cilium movement involved in cell motility GO:0060295 Any process that modulates the rate frequency or extent of cilium movement involved in ciliary motility. GOC:BHF GOC:dph GOC:tb Any process that modulates the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs. regulation of sarcomere organisation biological_process GO:0060297 regulation of sarcomere organization GO:0060297 Any process that modulates the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs. GOC:BHF GOC:dph GOC:tb regulation of sarcomere organisation GOC:mah Any process that increases the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs. positive regulation of sarcomere organisation biological_process GO:0060298 positive regulation of sarcomere organization GO:0060298 Any process that increases the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs. GOC:BHF GOC:dph GOC:tb positive regulation of sarcomere organisation GOC:mah Any process that decreases the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs. negative regulation of sarcomere organisation biological_process GO:0060299 negative regulation of sarcomere organization GO:0060299 Any process that decreases the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs. GOC:BHF GOC:dph GOC:tb negative regulation of sarcomere organisation GOC:mah The biological process whose specific outcome is the progression of a head from an initial condition to its mature state. The head is the anterior-most division of the body. biological_process GO:0060322 head development GO:0060322 The biological process whose specific outcome is the progression of a head from an initial condition to its mature state. The head is the anterior-most division of the body. GOC:dph The process in which the anatomical structures of the head are generated and organized. The head is the anterior-most division of the body. biological_process GO:0060323 head morphogenesis GO:0060323 The process in which the anatomical structures of the head are generated and organized. The head is the anterior-most division of the body. GOC:dph The biological process whose specific outcome is the progression of a face from an initial condition to its mature state. The face is the ventral division of the head. biological_process GO:0060324 face development GO:0060324 The biological process whose specific outcome is the progression of a face from an initial condition to its mature state. The face is the ventral division of the head. GOC:dph The process in which the anatomical structures of the face are generated and organized. The face is the ventral division of the head. biological_process GO:0060325 face morphogenesis GO:0060325 The process in which the anatomical structures of the face are generated and organized. The face is the ventral division of the head. GOC:dph Any process that modulates the frequency, rate or extent of a process in which a cell, a substance, or a cellular entity is transported to, or maintained in a specific location within or in the membrane of a cell. regulation of cellular localisation biological_process GO:0060341 regulation of cellular localization GO:0060341 Any process that modulates the frequency, rate or extent of a process in which a cell, a substance, or a cellular entity is transported to, or maintained in a specific location within or in the membrane of a cell. GOC:dph GOC:tb regulation of cellular localisation GOC:mah The process whose specific outcome is the progression of bone over time, from its formation to the mature structure. Bone is the hard skeletal connective tissue consisting of both mineral and cellular components. biological_process GO:0060348 bone development GO:0060348 The process whose specific outcome is the progression of bone over time, from its formation to the mature structure. Bone is the hard skeletal connective tissue consisting of both mineral and cellular components. GOC:dph The process in which bones are generated and organized. biological_process GO:0060349 bone morphogenesis GO:0060349 The process in which bones are generated and organized. GOC:dph The process in which bones are generated and organized as a result of the conversion of initial cartilaginous anlage into bone. biological_process GO:0060350 endochondral bone morphogenesis GO:0060350 The process in which bones are generated and organized as a result of the conversion of initial cartilaginous anlage into bone. GOC:dph PMID:11680679 The process whose specific outcome is the progression of the cartilage that will provide a scaffold for mineralization of endochondral bones. biological_process GO:0060351 cartilage development involved in endochondral bone morphogenesis GO:0060351 The process whose specific outcome is the progression of the cartilage that will provide a scaffold for mineralization of endochondral bones. GOC:dph Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ammonium stimulus. GO:1903717 response to ammonia biological_process GO:0060359 response to ammonium ion GO:0060359 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ammonium stimulus. GOC:TermGenie GO_REF:0000071 PMID:23509267 Self-propelled movement of an organism from one location to another through the air, usually by means of active wing movement. biological_process GO:0060361 flight GO:0060361 Self-propelled movement of an organism from one location to another through the air, usually by means of active wing movement. GOC:dph The process in which any suture between cranial bones is generated and organized. biological_process GO:0060363 cranial suture morphogenesis GO:0060363 The process in which any suture between cranial bones is generated and organized. GOC:dph GOC:pr GOC:sl The process in which a relatively unspecialized cell acquires specialized features of a cardiac myoblast. A cardiac myoblast is a precursor cell that has been committed to a cardiac muscle cell fate but retains the ability to divide and proliferate throughout life. myocardial precursor cell differentiation biological_process cardiac myoblast differentiation GO:0060379 cardiac muscle cell myoblast differentiation GO:0060379 The process in which a relatively unspecialized cell acquires specialized features of a cardiac myoblast. A cardiac myoblast is a precursor cell that has been committed to a cardiac muscle cell fate but retains the ability to divide and proliferate throughout life. GOC:dph GOC:tb myocardial precursor cell differentiation GOC:mtg_heart cardiac myoblast differentiation GOC:dph GOC:tb The removal of tubulin heterodimers from one or both ends of an axonemal microtubule. An axonemal microtubule is a microtubule in the axoneme of a cilium or flagellum; an axoneme contains nine modified doublet microtubules surrounding a pair of single microtubules. biological_process GO:0060404 axonemal microtubule depolymerization GO:0060404 The removal of tubulin heterodimers from one or both ends of an axonemal microtubule. An axonemal microtubule is a microtubule in the axoneme of a cilium or flagellum; an axoneme contains nine modified doublet microtubules surrounding a pair of single microtubules. GOC:cilia GOC:dph GOC:krc GOC:tb Any process that modulates the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues. biological_process GO:0060408 regulation of acetylcholine metabolic process GO:0060408 Any process that modulates the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues. GOC:dph GOC:tb Any process that increases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues. biological_process GO:0060409 positive regulation of acetylcholine metabolic process GO:0060409 Any process that increases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues. GOC:dph GOC:tb Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues. biological_process GO:0060410 negative regulation of acetylcholine metabolic process GO:0060410 Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues. GOC:dph GOC:tb The process in which the anatomical structure of a cardiac septum is generated and organized. A cardiac septum is a partition that separates parts of the heart. GO:0003280 heart septum morphogenesis biological_process GO:0060411 cardiac septum morphogenesis GO:0060411 The process in which the anatomical structure of a cardiac septum is generated and organized. A cardiac septum is a partition that separates parts of the heart. GOC:dph GOC:mtg_heart The developmental process in which a ventricular septum is generated and organized. A ventricular septum is an anatomical structure that separates the lower chambers (ventricles) of the heart from one another. interventricular septum morphogenesis biological_process GO:0060412 ventricular septum morphogenesis GO:0060412 The developmental process in which a ventricular septum is generated and organized. A ventricular septum is an anatomical structure that separates the lower chambers (ventricles) of the heart from one another. GOC:dph interventricular septum morphogenesis GOC:dph The developmental process in which atrial septum is generated and organized. The atrial septum separates the upper chambers (the atria) of the heart from one another. GO:0003287 interatrial septum morphogenesis biological_process GO:0060413 atrial septum morphogenesis GO:0060413 The developmental process in which atrial septum is generated and organized. The atrial septum separates the upper chambers (the atria) of the heart from one another. GOC:dph GOC:mtg_heart interatrial septum morphogenesis GOC:dph The process in which the structure of the smooth muscle tissue surrounding the aorta is generated and organized. An aorta is an artery that carries blood from the heart to other parts of the body. biological_process GO:0060414 aorta smooth muscle tissue morphogenesis GO:0060414 The process in which the structure of the smooth muscle tissue surrounding the aorta is generated and organized. An aorta is an artery that carries blood from the heart to other parts of the body. GOC:bf GOC:dgh GOC:dph Wikipedia:Aorta The process in which the anatomical structures of muscle tissue are generated and organized. Muscle tissue consists of a set of cells that are part of an organ and carry out a contractive function. biological_process GO:0060415 muscle tissue morphogenesis GO:0060415 The process in which the anatomical structures of muscle tissue are generated and organized. Muscle tissue consists of a set of cells that are part of an organ and carry out a contractive function. GOC:dph The increase in size or mass of the heart. biological_process GO:0060419 heart growth GO:0060419 The increase in size or mass of the heart. GOC:dph GOC:tb Any process that modulates the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart. biological_process GO:0060420 regulation of heart growth GO:0060420 Any process that modulates the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart. GOC:dph GOC:tb Any process that increases the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart. biological_process GO:0060421 positive regulation of heart growth GO:0060421 Any process that increases the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart. GOC:BHF GOC:dph GOC:tb The process in which the anatomical structures of the lung are generated and organized. biological_process GO:0060425 lung morphogenesis GO:0060425 The process in which the anatomical structures of the lung are generated and organized. GOC:dph The biological process whose specific outcome is the progression of a lung vasculature from an initial condition to its mature state. This process begins with the formation of the lung vasculature and ends with the mature structure. The lung vasculature is composed of the tubule structures that carry blood or lymph in the lungs. pulmonary vasculature development biological_process GO:0060426 lung vasculature development GO:0060426 The biological process whose specific outcome is the progression of a lung vasculature from an initial condition to its mature state. This process begins with the formation of the lung vasculature and ends with the mature structure. The lung vasculature is composed of the tubule structures that carry blood or lymph in the lungs. GOC:dph GOC:mtg_lung pulmonary vasculature development GOC:dph GOC:mtg_lung The biological process whose specific outcome is the progression of lung connective tissue from an initial condition to its mature state. This process begins with the formation of lung connective tissue and ends with the mature structure. The lung connective tissue is a material made up of fibers forming a framework and support structure for the lungs. pulmonary connective tissue development biological_process GO:0060427 lung connective tissue development GO:0060427 The biological process whose specific outcome is the progression of lung connective tissue from an initial condition to its mature state. This process begins with the formation of lung connective tissue and ends with the mature structure. The lung connective tissue is a material made up of fibers forming a framework and support structure for the lungs. GOC:dph GOC:mtg_lung The biological process whose specific outcome is the progression of the lung epithelium from an initial condition to its mature state. This process begins with the formation of lung epithelium and ends with the mature structure. The lung epithelium is the specialized epithelium that lines the inside of the lung. pulmonary epithelium development biological_process GO:0060428 lung epithelium development GO:0060428 The biological process whose specific outcome is the progression of the lung epithelium from an initial condition to its mature state. This process begins with the formation of lung epithelium and ends with the mature structure. The lung epithelium is the specialized epithelium that lines the inside of the lung. GOC:dph GOC:mtg_lung pulmonary epithelium development GOC:dph GOC:mtg_lung The process whose specific outcome is the progression of an epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure. biological_process GO:0060429 epithelium development GO:0060429 The process whose specific outcome is the progression of an epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure. GOC:dph GOC:mtg_lung The morphogenetic process in which the foregut region specified to become the lung forms the initial left and right buds. lung formation biological_process GO:0060431 primary lung bud formation GO:0060431 The morphogenetic process in which the foregut region specified to become the lung forms the initial left and right buds. GOC:dph GOC:mtg_lung lung formation GOC:dph The biological process whose specific outcome is the progression of a bronchus from an initial condition to its mature state. This process begins with the formation of the bronchus and ends with the mature structure. The bronchus is the portion of the airway that connects to the lungs. biological_process GO:0060433 bronchus development GO:0060433 The biological process whose specific outcome is the progression of a bronchus from an initial condition to its mature state. This process begins with the formation of the bronchus and ends with the mature structure. The bronchus is the portion of the airway that connects to the lungs. GOC:dph The process in which the bronchus is generated and organized. The bronchus is the portion of the airway that connects to the lungs. biological_process GO:0060434 bronchus morphogenesis GO:0060434 The process in which the bronchus is generated and organized. The bronchus is the portion of the airway that connects to the lungs. GOC:dph The increase in size or mass of a lung. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax. biological_process GO:0060437 lung growth GO:0060437 The increase in size or mass of a lung. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax. GOC:dph The process whose specific outcome is the progression of a trachea over time, from its formation to the mature structure. The trachea is the portion of the airway that attaches to the bronchi as it branches. biological_process GO:0060438 trachea development GO:0060438 The process whose specific outcome is the progression of a trachea over time, from its formation to the mature structure. The trachea is the portion of the airway that attaches to the bronchi as it branches. GOC:dph The process in which a trachea is generated and organized. The trachea is the portion of the airway that attaches to the bronchi as it branches. biological_process GO:0060439 trachea morphogenesis GO:0060439 The process in which a trachea is generated and organized. The trachea is the portion of the airway that attaches to the bronchi as it branches. GOC:dph The process pertaining to the initial formation of a trachea from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the trachea is recognizable. The trachea is the portion of the airway that attaches to the bronchi as it branches. biological_process GO:0060440 trachea formation GO:0060440 The process pertaining to the initial formation of a trachea from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the trachea is recognizable. The trachea is the portion of the airway that attaches to the bronchi as it branches. GOC:dph The process in which a highly ordered sequence of patterning events generates the branched epithelial tubes of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units. lung branching morphogenesis biological_process GO:0060441 epithelial tube branching involved in lung morphogenesis GO:0060441 The process in which a highly ordered sequence of patterning events generates the branched epithelial tubes of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units. GOC:dph GOC:mtg_lung lung branching morphogenesis GOC:dph Any process that increases the frequency, rate or extent of cardiac muscle contraction. biological_process GO:0060452 positive regulation of cardiac muscle contraction GO:0060452 Any process that increases the frequency, rate or extent of cardiac muscle contraction. GOC:dph GOC:tb Any process that modulates the rate frequency or extent of gastric secretion. Gastric secretion is the regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion. biological_process GO:0060453 regulation of gastric acid secretion GO:0060453 Any process that modulates the rate frequency or extent of gastric secretion. Gastric secretion is the regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion. GOC:dph GOC:tb Any process that increases the rate frequency or extent of gastric secretion. Gastric secretion is the regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion. biological_process GO:0060454 positive regulation of gastric acid secretion GO:0060454 Any process that increases the rate frequency or extent of gastric secretion. Gastric secretion is the regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion. GOC:dph GOC:tb Any process that decreases the rate frequency or extent of gastric secretion. Gastric secretion is the regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion. biological_process GO:0060455 negative regulation of gastric acid secretion GO:0060455 Any process that decreases the rate frequency or extent of gastric secretion. Gastric secretion is the regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion. GOC:dph GOC:tb Any process that increases the frequency, rate or extent of a digestive system process, a physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. biological_process GO:0060456 positive regulation of digestive system process GO:0060456 Any process that increases the frequency, rate or extent of a digestive system process, a physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. GOC:dph GOC:tb Any process that decreases the frequency, rate or extent of a digestive system process, a physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. biological_process GO:0060457 negative regulation of digestive system process GO:0060457 Any process that decreases the frequency, rate or extent of a digestive system process, a physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. GOC:dph GOC:tb The biological process whose specific outcome is the progression of a right lung from an initial condition to its mature state. This process begins with the formation of the right lung and ends with the mature structure. The right lung is the lung which is on the right side of the anterior posterior axis looking from a dorsal to ventral aspect. right pulmonary development biological_process GO:0060458 right lung development GO:0060458 The biological process whose specific outcome is the progression of a right lung from an initial condition to its mature state. This process begins with the formation of the right lung and ends with the mature structure. The right lung is the lung which is on the right side of the anterior posterior axis looking from a dorsal to ventral aspect. GOC:dph GOC:mtg_lung right pulmonary development GOC:dph GOC:mtg_lung The biological process whose specific outcome is the progression of a left lung from an initial condition to its mature state. This process begins with the formation of the left lung and ends with the mature structure. The left lung is the lung which is on the left side of the anterior posterior axis looking from a dorsal to ventral aspect. left pulmonary development biological_process GO:0060459 left lung development GO:0060459 The biological process whose specific outcome is the progression of a left lung from an initial condition to its mature state. This process begins with the formation of the left lung and ends with the mature structure. The left lung is the lung which is on the left side of the anterior posterior axis looking from a dorsal to ventral aspect. GOC:dph GOC:mtg_lung left pulmonary development GOC:dph The process in which anatomical structures of the left lung are generated and organized. biological_process GO:0060460 left lung morphogenesis GO:0060460 The process in which anatomical structures of the left lung are generated and organized. GOC:dph The process in which anatomical structures of the right lung are generated and organized. biological_process GO:0060461 right lung morphogenesis GO:0060461 The process in which anatomical structures of the right lung are generated and organized. GOC:dph GOC:mtg_lung The biological process whose specific outcome is the progression of a pharynx from an initial condition to its mature state. The pharynx is the part of the digestive system immediately posterior to the mouth. biological_process pharyngeal development GO:0060465 pharynx development GO:0060465 The biological process whose specific outcome is the progression of a pharynx from an initial condition to its mature state. The pharynx is the part of the digestive system immediately posterior to the mouth. GOC:dph GOC:rk Any process that decreases the rate, frequency or extent of fertilization. Fertilization is the union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy). biological_process GO:0060467 negative regulation of fertilization GO:0060467 Any process that decreases the rate, frequency or extent of fertilization. Fertilization is the union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy). GOC:dph The negative regulation of fertilization process that takes place as part of egg activation, ensuring that only a single sperm fertilizes the egg. negative regulation of fertilization involved in egg activation polyspermy block biological_process GO:0060468 prevention of polyspermy GO:0060468 The negative regulation of fertilization process that takes place as part of egg activation, ensuring that only a single sperm fertilizes the egg. GOC:dph negative regulation of fertilization involved in egg activation GOC:dph polyspermy block GOC:dph The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features of a mature cell found in the lung. Differentiation includes the processes involved in commitment of a cell to a specific fate. pulmonary cell differentiation biological_process GO:0060479 lung cell differentiation GO:0060479 The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features of a mature cell found in the lung. Differentiation includes the processes involved in commitment of a cell to a specific fate. GOC:dph GOC:mtg_lung pulmonary cell differentiation GOC:dph The process whose specific outcome is the progression of a mesenchymal tissue over time, from its formation to the mature structure. A mesenchymal tissue is made up of loosely packed stellate cells. mesenchymal development biological_process GO:0060485 mesenchyme development GO:0060485 The process whose specific outcome is the progression of a mesenchymal tissue over time, from its formation to the mature structure. A mesenchymal tissue is made up of loosely packed stellate cells. GOC:dph mesenchymal development GOC:dph The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell that contributes to the epithelium of the lung. biological_process pulmonary epithelial cell differentiation GO:0060487 lung epithelial cell differentiation GO:0060487 The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell that contributes to the epithelium of the lung. GOC:dph pulmonary epithelial cell differentiation GOC:dph Any process that modulates the rate, frequency, or extent of cell projection assembly. biological_process regulation of cell projection formation GO:0060491 regulation of cell projection assembly GO:0060491 Any process that modulates the rate, frequency, or extent of cell projection assembly. GOC:dph GOC:tb regulation of cell projection formation GOC:dph GOC:tb Any process that mediates the transfer of information from one cell to another and contributes to the progression of the lung, from its initial state to the mature structure. cell-cell signalling involved in lung development biological_process GO:0060495 cell-cell signaling involved in lung development GO:0060495 Any process that mediates the transfer of information from one cell to another and contributes to the progression of the lung, from its initial state to the mature structure. GOC:dph GOC:mtg_lung cell-cell signalling involved in lung development GOC:mah Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell and contributes to the development of the lung. mesenchymal-epithelial cell signalling involved in lung development biological_process GO:0060496 mesenchymal-epithelial cell signaling involved in lung development GO:0060496 Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell and contributes to the development of the lung. GOC:dph GOC:mtg_lung mesenchymal-epithelial cell signalling involved in lung development GOC:mah Any process that mediates the transfer of information between a mesenchymal cell and an endodermal cell. mesenchymal-endodermal cell signalling biological_process GO:0060497 mesenchymal-endodermal cell signaling GO:0060497 Any process that mediates the transfer of information between a mesenchymal cell and an endodermal cell. GOC:dph mesenchymal-endodermal cell signalling GOC:mah Any process that increases the rate or frequency of epithelial cell proliferation that results in the lung attaining its shape. biological_process GO:0060501 positive regulation of epithelial cell proliferation involved in lung morphogenesis GO:0060501 Any process that increases the rate or frequency of epithelial cell proliferation that results in the lung attaining its shape. GOC:dph The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population that contributes to the shaping of the lung. biological_process GO:0060502 epithelial cell proliferation involved in lung morphogenesis GO:0060502 The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population that contributes to the shaping of the lung. GOC:dph The process whose specific outcome is the progression of lung cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate. dph 2009-04-10T08:12:06Z pulmonary cartilage development biological_process GO:0060532 bronchus cartilage development GO:0060532 The process whose specific outcome is the progression of lung cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate. GOC:dph GOC:mtg_lung The process in which the bronchus cartilage is generated and organized. The bronchus cartilage is the connective tissue of the portion of the airway that connects to the lungs. dph 2009-04-10T08:47:41Z biological_process GO:0060533 bronchus cartilage morphogenesis GO:0060533 The process in which the bronchus cartilage is generated and organized. The bronchus cartilage is the connective tissue of the portion of the airway that connects to the lungs. GOC:dph The process whose specific outcome is the progression of the tracheal cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate. dph 2009-04-10T09:00:18Z biological_process GO:0060534 trachea cartilage development GO:0060534 The process whose specific outcome is the progression of the tracheal cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate. GOC:dph The process in which the anatomical structures of cartilage in the trachea are generated and organized. dph 2009-04-10T09:07:48Z biological_process GO:0060535 trachea cartilage morphogenesis GO:0060535 The process in which the anatomical structures of cartilage in the trachea are generated and organized. GOC:dph The process in which the anatomical structures of cartilage are generated and organized. dph 2009-04-10T09:13:27Z biological_process GO:0060536 cartilage morphogenesis GO:0060536 The process in which the anatomical structures of cartilage are generated and organized. GOC:dph The progression of muscle tissue over time, from its initial formation to its mature state. Muscle tissue is a contractile tissue made up of actin and myosin fibers. dph 2009-04-10T08:05:37Z biological_process GO:0060537 muscle tissue development GO:0060537 The progression of muscle tissue over time, from its initial formation to its mature state. Muscle tissue is a contractile tissue made up of actin and myosin fibers. GOC:dph The progression of a skeletal muscle organ over time from its initial formation to its mature state. A skeletal muscle organ includes the skeletal muscle tissue and its associated connective tissue. dph 2009-04-10T08:25:12Z biological_process GO:0060538 skeletal muscle organ development GO:0060538 The progression of a skeletal muscle organ over time from its initial formation to its mature state. A skeletal muscle organ includes the skeletal muscle tissue and its associated connective tissue. GOC:dph The progression of the diaphragm over time from its initial formation to the mature structure. The diaphragm is a skeletal muscle that is responsible for contraction and expansion of the lungs. dph 2009-04-10T08:44:56Z biological_process GO:0060539 diaphragm development GO:0060539 The progression of the diaphragm over time from its initial formation to the mature structure. The diaphragm is a skeletal muscle that is responsible for contraction and expansion of the lungs. GOC:dph The process in which the anatomical structures of the diaphragm are generated and organized. dph 2009-04-10T08:47:51Z biological_process GO:0060540 diaphragm morphogenesis GO:0060540 The process in which the anatomical structures of the diaphragm are generated and organized. GOC:dph The progression of the respiratory system over time from its formation to its mature structure. The respiratory system carries out respiratory gaseous exchange. dph 2009-04-10T08:55:42Z biological_process GO:0060541 respiratory system development GO:0060541 The progression of the respiratory system over time from its formation to its mature structure. The respiratory system carries out respiratory gaseous exchange. GOC:dph The increase in size or mass of an anatomical structure that contributes to the structure attaining its shape. dph 2009-04-28T08:42:53Z differential growth biological_process GO:0060560 developmental growth involved in morphogenesis GO:0060560 The increase in size or mass of an anatomical structure that contributes to the structure attaining its shape. GOC:dph differential growth GOC:dph Any apoptotic process that contributes to the shaping of an anatomical structure. dph 2009-04-28T09:17:27Z apoptosis involved in morphogenesis biological_process apoptosis involved in development morphogenetic apoptosis GO:0060561 apoptotic process involved in morphogenesis GO:0060561 Any apoptotic process that contributes to the shaping of an anatomical structure. GOC:dph GOC:mtg_apoptosis morphogenetic apoptosis GOC:dph The process in which the anatomical structures of a tube are generated and organized from an epithelium. Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system. dph 2009-04-28T09:33:36Z biological_process GO:0060562 epithelial tube morphogenesis GO:0060562 The process in which the anatomical structures of a tube are generated and organized from an epithelium. Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system. GOC:dph The process in which epiblast cells acquire specialized features of neuroepithelial cells. dph 2009-04-29T01:50:05Z biological_process GO:0060563 neuroepithelial cell differentiation GO:0060563 The process in which epiblast cells acquire specialized features of neuroepithelial cells. GOC:dph GOC:tb The morphogenetic process in which an epithelial sheet bends along a linear axis. dph 2009-04-30T09:27:17Z epithelial folding biological_process folding of an epithelial sheet GO:0060571 morphogenesis of an epithelial fold GO:0060571 The morphogenetic process in which an epithelial sheet bends along a linear axis. GOC:dph epithelial folding GOC:dph folding of an epithelial sheet GOC:dph The morphogenetic process in which a bud forms from an epithelial sheet. A bud is a protrusion that forms form the sheet by localized folding. dph 2009-04-30T09:38:35Z biological_process GO:0060572 morphogenesis of an epithelial bud GO:0060572 The morphogenetic process in which a bud forms from an epithelial sheet. A bud is a protrusion that forms form the sheet by localized folding. GOC:dph The process in which the anatomical structure of the pulmonary venous blood vessels are generated and organized. Pulmonary veins are blood vessels that transport blood from the lungs to the heart. dph 2009-05-06T08:44:04Z biological_process pulmonary venous blood vessel morphogenesis GO:0060577 pulmonary vein morphogenesis GO:0060577 The process in which the anatomical structure of the pulmonary venous blood vessels are generated and organized. Pulmonary veins are blood vessels that transport blood from the lungs to the heart. GOC:dph pulmonary venous blood vessel morphogenesis GOC:dph The process in which the anatomical structure of superior vena cava generated and organized. The superior vena cava is a blood vessel that transports blood from the upper body to the heart. dph 2009-05-06T08:47:21Z biological_process GO:0060578 superior vena cava morphogenesis GO:0060578 The process in which the anatomical structure of superior vena cava generated and organized. The superior vena cava is a blood vessel that transports blood from the upper body to the heart. GOC:dph The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells within a field of cells that will exhibit a certain pattern of differentiation. Positional information is established through protein signals that emanate from a localized source within a developmental field resulting in specification of a cell type. Those signals are then interpreted in a cell-autonomous manner resulting in the determination of the cell type. dph 2009-05-07T12:40:55Z biological_process GO:0060581 cell fate commitment involved in pattern specification GO:0060581 The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells within a field of cells that will exhibit a certain pattern of differentiation. Positional information is established through protein signals that emanate from a localized source within a developmental field resulting in specification of a cell type. Those signals are then interpreted in a cell-autonomous manner resulting in the determination of the cell type. GOC:dph The process in which a mesenchymal cell, acquires specialized structural and/or functional features of a chondroblast. Differentiation includes the processes involved in commitment of a cell to a chondroblast fate. A chondroblast is a precursor cell to chondrocytes. dph 2009-05-11T07:47:36Z biological_process chondrocyte progenitor cell differentiation GO:0060591 chondroblast differentiation GO:0060591 The process in which a mesenchymal cell, acquires specialized structural and/or functional features of a chondroblast. Differentiation includes the processes involved in commitment of a cell to a chondroblast fate. A chondroblast is a precursor cell to chondrocytes. GOC:dph chondrocyte progenitor cell differentiation GOC:dph The process whose specific outcome is the progression of adipose tissue over time, from its formation to the mature structure. Adipose tissue is specialized tissue that is used to store fat. dph 2009-05-15T12:36:28Z biological_process adipogenesis GO:0060612 adipose tissue development GO:0060612 The process whose specific outcome is the progression of adipose tissue over time, from its formation to the mature structure. Adipose tissue is specialized tissue that is used to store fat. GOC:dph adipogenesis GOC:mah GOC:sl Any process that modulates the rate, frequency, or extent of chromosome condensation, the progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells. dph 2009-05-18T02:12:13Z biological_process GO:0060623 regulation of chromosome condensation GO:0060623 Any process that modulates the rate, frequency, or extent of chromosome condensation, the progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells. GOC:dph GOC:tb Any process that modulates the rate, frequency, or extent of vesicle-mediated transport, the directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell. dph 2009-05-18T02:29:43Z biological_process GO:0060627 regulation of vesicle-mediated transport GO:0060627 Any process that modulates the rate, frequency, or extent of vesicle-mediated transport, the directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell. GOC:dph GOC:tb Any process that modulates the rate, frequency, or extent of microtubule-based movement, the movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins. dph 2009-05-18T03:07:02Z biological_process GO:0060632 regulation of microtubule-based movement GO:0060632 Any process that modulates the rate, frequency, or extent of microtubule-based movement, the movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins. GOC:dph GOC:tb Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell where it is received and interpreted. dph 2009-05-19T03:59:05Z mesenchymal-epithelial cell signalling biological_process GO:0060638 mesenchymal-epithelial cell signaling GO:0060638 Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell where it is received and interpreted. GOC:dph mesenchymal-epithelial cell signalling GOC:mah Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell where it is interpreted. dph 2009-06-03T06:36:46Z epithelial-mesenchymal cell signalling biological_process GO:0060684 epithelial-mesenchymal cell signaling GO:0060684 Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell where it is interpreted. GOC:dph epithelial-mesenchymal cell signalling GOC:mah Any process that modulates the rate, frequency, or extent of branching morphogenesis, the process in which the anatomical structures of branches are generated and organized. dph 2009-06-05T12:41:44Z biological_process GO:0060688 regulation of morphogenesis of a branching structure GO:0060688 Any process that modulates the rate, frequency, or extent of branching morphogenesis, the process in which the anatomical structures of branches are generated and organized. GOC:dph The developmental process in which an ectodermal placode forms. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm. dph 2009-08-04T12:15:57Z biological_process GO:0060788 ectodermal placode formation GO:0060788 The developmental process in which an ectodermal placode forms. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm. GOC:dph GOC:sdb_2009 GOC:tb The commitment of cells to specific cell fates of the endoderm, ectoderm, or mesoderm as a part of gastrulation. dph 2009-08-04T03:11:22Z biological_process GO:0060795 cell fate commitment involved in formation of primary germ layer GO:0060795 The commitment of cells to specific cell fates of the endoderm, ectoderm, or mesoderm as a part of gastrulation. GOC:dph GOC:sdb_2009 GOC:tb The process in which a relatively unspecialized cell acquires specialized features of a blood vessel endothelial cell, a thin flattened cell that lines the inside surfaces of blood vessels. dph 2009-08-11T03:47:36Z biological_process GO:0060837 blood vessel endothelial cell differentiation GO:0060837 The process in which a relatively unspecialized cell acquires specialized features of a blood vessel endothelial cell, a thin flattened cell that lines the inside surfaces of blood vessels. GOC:dph GOC:sdb_2009 GOC:tb The progression of the artery over time, from its initial formation to the mature structure. An artery is a blood vessel that carries blood away from the heart to a capillary bed. dph 2009-08-12T10:10:51Z biological_process GO:0060840 artery development GO:0060840 The progression of the artery over time, from its initial formation to the mature structure. An artery is a blood vessel that carries blood away from the heart to a capillary bed. GOC:dph GOC:sdb_2009 GOC:tb The progression of the venous blood vessel over time from its initial formation to the mature structure. Venous blood vessels carry blood back to the heart after the capillary bed. dph 2009-08-12T10:14:07Z biological_process GO:0060841 venous blood vessel development GO:0060841 The progression of the venous blood vessel over time from its initial formation to the mature structure. Venous blood vessels carry blood back to the heart after the capillary bed. GOC:dph GOC:sdb_2009 GOC:tb The process in which a relatively unspecialized endothelial cell acquires specialized features of an arterial endothelial cell, a thin flattened cell that lines the inside surfaces of arteries. dph 2009-08-12T10:41:34Z biological_process GO:0060842 arterial endothelial cell differentiation GO:0060842 The process in which a relatively unspecialized endothelial cell acquires specialized features of an arterial endothelial cell, a thin flattened cell that lines the inside surfaces of arteries. GOC:dph GOC:sdb_2009 GOC:tb The process in which a relatively unspecialized endothelial cell acquires specialized features of a venous endothelial cell, a thin flattened cell that lines the inside surfaces of veins. dph 2009-08-12T10:43:40Z biological_process GO:0060843 venous endothelial cell differentiation GO:0060843 The process in which a relatively unspecialized endothelial cell acquires specialized features of a venous endothelial cell, a thin flattened cell that lines the inside surfaces of veins. GOC:dph GOC:sdb_2009 GOC:tb The developmental process that results in the creation of defined areas or spaces within the neural plate to which cells respond and eventually are instructed to differentiate. dph 2009-08-13T02:06:27Z Reactome:R-HSA-9834899 biological_process GO:0060896 neural plate pattern specification GO:0060896 The developmental process that results in the creation of defined areas or spaces within the neural plate to which cells respond and eventually are instructed to differentiate. GOC:dph GOC:sdb_2009 GOC:tb Reactome:R-HSA-9834899 Specification of the neural plate border The pattern specification process that results in the subdivision of an axis or axes of the neural plate in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment. dph 2009-08-13T02:09:04Z biological_process GO:0060897 neural plate regionalization GO:0060897 The pattern specification process that results in the subdivision of an axis or axes of the neural plate in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment. GOC:dph GOC:sdb_2009 GOC:tb The developmental process pertaining to the initial formation of a camera-type eye from unspecified neurectoderm. This process begins with the differentiation of cells that form the optic field and ends when the optic cup has attained its shape. dph 2009-08-13T02:26:54Z biological_process GO:0060900 embryonic camera-type eye formation GO:0060900 The developmental process pertaining to the initial formation of a camera-type eye from unspecified neurectoderm. This process begins with the differentiation of cells that form the optic field and ends when the optic cup has attained its shape. GOC:dph GOC:sdb_2009 GOC:tb The developmental process pertaining to the initial formation of the heart from unspecified parts. This process begins with the specific processes that contribute to the appearance of the heart field and the arrival of cardiac neural crest to the heart region. The process ends when the structural rudiment is recognizable. dph 2009-09-17T09:02:13Z Reactome:R-HSA-9733709 biological_process cardiogenesis GO:0060914 heart formation GO:0060914 The developmental process pertaining to the initial formation of the heart from unspecified parts. This process begins with the specific processes that contribute to the appearance of the heart field and the arrival of cardiac neural crest to the heart region. The process ends when the structural rudiment is recognizable. GOC:mtg_heart Reactome:R-HSA-9733709 Cardiogenesis cardiogenesis GOC:mtg_heart The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell of the lung. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types. dph 2009-09-18T11:45:33Z biological_process GO:0060915 mesenchymal cell differentiation involved in lung development GO:0060915 The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell of the lung. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types. GOC:dph The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population that contributes to the progression of the lung over time. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets. dph 2009-09-18T11:50:17Z biological_process GO:0060916 mesenchymal cell proliferation involved in lung development GO:0060916 The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population that contributes to the progression of the lung over time. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets. GOC:dph The process in which a relatively unspecialized cell acquires specialized features of a pacemaker cell. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions. dph 2009-09-29T11:01:31Z pacemaker cell differentiation biological_process GO:0060920 cardiac pacemaker cell differentiation GO:0060920 The process in which a relatively unspecialized cell acquires specialized features of a pacemaker cell. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions. GOC:mtg_cardiac_conduct_nov11 GOC:mtg_heart The process in which a relatively unspecialized cell acquires specialized features of a sinoatrial (SA) node cell. SA node cells are pacemaker cells that are found in the sinoatrial node. dph 2009-09-29T11:03:30Z SA node cell differentiation SAN cell differentiation sinus node cell differentiation biological_process GO:0060921 sinoatrial node cell differentiation GO:0060921 The process in which a relatively unspecialized cell acquires specialized features of a sinoatrial (SA) node cell. SA node cells are pacemaker cells that are found in the sinoatrial node. GOC:mtg_heart SA node cell differentiation GOC:mtg_heart SAN cell differentiation GOC:BHF GOC:mtg_cardiac_conduct_nov11 sinus node cell differentiation GOC:BHF GOC:mtg_cardiac_conduct_nov11 The process in which a relatively unspecialized cell acquires specialized features of an atrioventricular (AV) node cell. AV node cells are pacemaker cells that are found in the atrioventricular node. dph 2009-09-29T11:07:06Z biological_process AV node cell differentiation GO:0060922 atrioventricular node cell differentiation GO:0060922 The process in which a relatively unspecialized cell acquires specialized features of an atrioventricular (AV) node cell. AV node cells are pacemaker cells that are found in the atrioventricular node. GOC:mtg_heart AV node cell differentiation GOC:mtg_heart The process whose specific outcome is the progression of a pacemaker cell over time, from its formation to the mature state. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions. dph 2009-09-29T11:51:55Z pacemaker cell development biological_process GO:0060926 cardiac pacemaker cell development GO:0060926 The process whose specific outcome is the progression of a pacemaker cell over time, from its formation to the mature state. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions. GOC:mtg_cardiac_conduct_nov11 GOC:mtg_heart The process whose specific outcome is the progression of an atrioventricular (AV) node cell over time, from its formation to the mature state. dph 2009-09-29T11:59:26Z AV node cell development biological_process GO:0060928 atrioventricular node cell development GO:0060928 The process whose specific outcome is the progression of an atrioventricular (AV) node cell over time, from its formation to the mature state. GOC:mtg_heart AV node cell development GOC:mtg_heart The process whose specific outcome is the progression of a sinoatrial (SA) node cell over time, from its formation to the mature state. SA node cells are pacemaker cells that are found in the sinoatrial node. dph 2009-09-29T12:05:47Z SA node cell development SAN cell development sinus node cell development biological_process GO:0060931 sinoatrial node cell development GO:0060931 The process whose specific outcome is the progression of a sinoatrial (SA) node cell over time, from its formation to the mature state. SA node cells are pacemaker cells that are found in the sinoatrial node. GOC:mtg_heart SA node cell development GOC:mtg_heart SAN cell development GOC:BHF GOC:mtg_cardiac_conduct_nov11 sinus node cell development GOC:BHF GOC:mtg_cardiac_conduct_nov11 The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell of the His-Purkinje system. These cells form the fibers regulate cardiac muscle contraction in the ventricles. dph 2009-09-29T01:10:32Z biological_process GO:0060932 His-Purkinje system cell differentiation GO:0060932 The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell of the His-Purkinje system. These cells form the fibers regulate cardiac muscle contraction in the ventricles. GOC:mtg_heart The process whose specific outcome is the progression of a His-Purkinje cell over time, from its formation to the mature state. These cells form the fibers that regulate cardiac muscle contraction in the ventricles. dph 2009-09-29T01:15:02Z biological_process GO:0060933 His-Purkinje system cell development GO:0060933 The process whose specific outcome is the progression of a His-Purkinje cell over time, from its formation to the mature state. These cells form the fibers that regulate cardiac muscle contraction in the ventricles. GOC:mtg_heart The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules. dph 2009-09-29T01:20:04Z biological_process GO:0060935 cardiac fibroblast cell differentiation GO:0060935 The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules. GOC:mtg_heart The process whose specific outcome is the progression of a cardiac fibroblast over time, from its formation to the mature state. A cardiac fibroblast is a connective tissue cell of the heart which secretes an extracellular matrix rich in collagen and other macromolecules. dph 2009-09-29T01:23:03Z biological_process GO:0060936 cardiac fibroblast cell development GO:0060936 The process whose specific outcome is the progression of a cardiac fibroblast over time, from its formation to the mature state. A cardiac fibroblast is a connective tissue cell of the heart which secretes an extracellular matrix rich in collagen and other macromolecules. GOC:mtg_heart The process in which a relatively unspecialized cell acquires specialized features of a neuron of the heart. dph 2009-09-29T02:45:33Z heart neuron differentiation biological_process GO:0060945 cardiac neuron differentiation GO:0060945 The process in which a relatively unspecialized cell acquires specialized features of a neuron of the heart. GOC:mtg_heart heart neuron differentiation GOC:mtg_heart The process in which a relatively unspecialized cell acquires specialized features of a blood vessel endothelial cell of the heart. Blood vessel endothelial cells are thin flattened cells that line the inside surfaces of blood vessels. dph 2009-09-29T02:48:55Z biological_process GO:0060946 cardiac blood vessel endothelial cell differentiation GO:0060946 The process in which a relatively unspecialized cell acquires specialized features of a blood vessel endothelial cell of the heart. Blood vessel endothelial cells are thin flattened cells that line the inside surfaces of blood vessels. GOC:mtg_heart The process in which a relatively unspecialized cell acquires the specialized features of a glial cell of the heart. dph 2009-09-29T03:06:37Z biological_process GO:0060950 cardiac glial cell differentiation GO:0060950 The process in which a relatively unspecialized cell acquires the specialized features of a glial cell of the heart. GOC:mtg_heart The process aimed at the progression of a cardiac glial cell over time, from its formation to the fully functional mature cell. dph 2009-09-29T03:09:24Z biological_process GO:0060952 cardiac glial cell development GO:0060952 The process aimed at the progression of a cardiac glial cell over time, from its formation to the fully functional mature cell. GOC:mtg_heart The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an endocardial cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart. The endocardium is the innermost layer of tissue of the heart, and lines the heart chambers. dph 2009-09-29T03:20:39Z biological_process GO:0060956 endocardial cell differentiation GO:0060956 The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an endocardial cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart. The endocardium is the innermost layer of tissue of the heart, and lines the heart chambers. GOC:mtg_heart The progression of an endocardial cell over time, from its formation to the mature cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart. dph 2009-09-29T03:26:59Z biological_process GO:0060958 endocardial cell development GO:0060958 The progression of an endocardial cell over time, from its formation to the mature cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart. GOC:mtg_heart The process whose specific outcome is the progression of a cardiac neuron over time, from its formation to the mature state. dph 2009-09-30T10:14:56Z heart neuron development biological_process GO:0060959 cardiac neuron development GO:0060959 The process whose specific outcome is the progression of a cardiac neuron over time, from its formation to the mature state. GOC:mtg_heart heart neuron development GOC:mtg_heart The orderly movement of a cell from one site to another that will contribute to the progression of the heart over time, from its initial formation, to the mature organ. dph 2009-10-06T10:53:49Z biological_process GO:0060973 cell migration involved in heart development GO:0060973 The orderly movement of a cell from one site to another that will contribute to the progression of the heart over time, from its initial formation, to the mature organ. GOC:mtg_heart The orderly movement of a cell from one site to another that contribute to the formation of the heart. The initial heart structure is made up of mesoderm-derived heart progenitor cells and neural crest-derived cells. dph 2009-10-06T10:56:33Z biological_process GO:0060974 cell migration involved in heart formation GO:0060974 The orderly movement of a cell from one site to another that contribute to the formation of the heart. The initial heart structure is made up of mesoderm-derived heart progenitor cells and neural crest-derived cells. GOC:mtg_heart The process whose specific outcome is the progression of the blood vessels of the heart over time, from its formation to the mature structure. dph 2009-10-06T12:15:23Z cardiac blood vessel development cardiac vasculature development coronary blood vessel development heart blood vessel development heart vasculature development biological_process GO:0060976 coronary vasculature development GO:0060976 The process whose specific outcome is the progression of the blood vessels of the heart over time, from its formation to the mature structure. GOC:mtg_heart cardiac blood vessel development GOC:mtg_heart cardiac vasculature development GOC:mtg_heart coronary blood vessel development GOC:mtg_heart heart blood vessel development GOC:mtg_heart heart vasculature development GOC:mtg_heart The process in which the anatomical structures of blood vessels of the heart are generated and organized. The blood vessel is the vasculature carrying blood. dph 2009-10-06T12:28:23Z cardiac blood vessel morphogenesis cardiac vasculature morphogenesis coronary blood vessel morphogenesis heart blood vessel morphogenesis heart vasculature morphogenesis biological_process GO:0060977 coronary vasculature morphogenesis GO:0060977 The process in which the anatomical structures of blood vessels of the heart are generated and organized. The blood vessel is the vasculature carrying blood. GOC:mtg_heart cardiac blood vessel morphogenesis GOC:mtg_heart cardiac vasculature morphogenesis GOC:mtg_heart coronary blood vessel morphogenesis GOC:mtg_heart heart blood vessel morphogenesis GOC:mtg_heart heart vasculature morphogenesis GOC:mtg_heart Blood vessel formation in the heart when new vessels emerge from the proliferation of pre-existing blood vessels. dph 2009-10-06T02:02:12Z angiogenesis involved in cardiac vascular morphogenesis angiogenesis involved in heart vascular morphogenesis coronary blood vessel angiogenesis coronary vasculature angiogenesis biological_process GO:0060978 angiogenesis involved in coronary vascular morphogenesis GO:0060978 Blood vessel formation in the heart when new vessels emerge from the proliferation of pre-existing blood vessels. GOC:mtg_heart angiogenesis involved in cardiac vascular morphogenesis GOC:mtg_heart angiogenesis involved in heart vascular morphogenesis GOC:mtg_heart coronary blood vessel angiogenesis GOC:mtg_heart coronary vasculature angiogenesis GOC:mtg_heart The differentiation of endothelial cells from progenitor cells that contributes to blood vessel development in the heart, and the de novo formation of blood vessels and tubes. dph 2009-10-06T02:19:42Z coronary vasculogenesis vasculogenesis involved in coronary blood vessel morphogenesis biological_process GO:0060979 vasculogenesis involved in coronary vascular morphogenesis GO:0060979 The differentiation of endothelial cells from progenitor cells that contributes to blood vessel development in the heart, and the de novo formation of blood vessels and tubes. GOC:mtg_heart coronary vasculogenesis GOC:mtg_heart vasculogenesis involved in coronary blood vessel morphogenesis GOC:mtg_heart The orderly movement of a cell from one site to another that will contribute to the differentiation of an endothelial cell that will form the blood vessels of the heart. dph 2009-10-06T02:33:06Z biological_process GO:0060980 cell migration involved in coronary vasculogenesis GO:0060980 The orderly movement of a cell from one site to another that will contribute to the differentiation of an endothelial cell that will form the blood vessels of the heart. GOC:mtg_heart The orderly movement of a cell from one site to another that will contribute to the formation of new blood vessels in the heart from pre-existing blood vessels. dph 2009-10-06T02:49:12Z biological_process GO:0060981 cell migration involved in coronary angiogenesis GO:0060981 The orderly movement of a cell from one site to another that will contribute to the formation of new blood vessels in the heart from pre-existing blood vessels. GOC:mtg_heart The regulated release of a hormone into the circulatory system. dph 2010-01-11T09:03:48Z biological_process GO:0060986 endocrine hormone secretion GO:0060986 The regulated release of a hormone into the circulatory system. GOC:dph The process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission. dph 2010-01-20T09:06:33Z biological_process GO:0060996 dendritic spine development GO:0060996 The process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission. GOC:dph The process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission. dph 2010-01-20T09:09:57Z biological_process GO:0060997 dendritic spine morphogenesis GO:0060997 The process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission. GOC:dph Any process that modulates the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure. dph 2010-01-20T09:17:06Z biological_process GO:0060998 regulation of dendritic spine development GO:0060998 Any process that modulates the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure. GOC:dph Any process that increases the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure. dph 2010-01-20T09:27:21Z biological_process GO:0060999 positive regulation of dendritic spine development GO:0060999 Any process that increases the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure. GOC:dph Any process that decreases the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure. dph 2010-01-20T09:29:18Z biological_process GO:0061000 negative regulation of dendritic spine development GO:0061000 Any process that decreases the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure. GOC:dph Any process that modulates the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission. dph 2010-01-20T09:31:52Z biological_process GO:0061001 regulation of dendritic spine morphogenesis GO:0061001 Any process that modulates the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission. GOC:dph Any process that decreases the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission. dph 2010-01-20T09:34:49Z biological_process GO:0061002 negative regulation of dendritic spine morphogenesis GO:0061002 Any process that decreases the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission. GOC:dph Any process that increases the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission. dph 2010-01-20T09:36:54Z biological_process GO:0061003 positive regulation of dendritic spine morphogenesis GO:0061003 Any process that increases the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission. GOC:dph A process which results in the assembly, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins. jl 2010-02-08T02:43:11Z GO:0016044 GO:0044802 Reactome:R-HSA-199991 cellular membrane organisation cellular membrane organization membrane organisation biological_process membrane organization and biogenesis single-organism membrane organization GO:0061024 membrane organization GO:0061024 A process which results in the assembly, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins. GOC:dph GOC:tb Reactome:R-HSA-199991 Membrane Trafficking membrane organisation GOC:mah membrane organization and biogenesis GOC:mah The membrane organization process that joins two lipid bilayers to form a single membrane. jl 2010-02-08T02:48:06Z GO:0006944 GO:0044801 Wikipedia:Lipid_bilayer_fusion cellular membrane fusion biological_process single-organism membrane fusion GO:0061025 membrane fusion GO:0061025 The membrane organization process that joins two lipid bilayers to form a single membrane. GOC:dph GOC:tb The progression of the visceral serous pericardium from its formation to the mature structure. The visceral serous pericardium is the inner layer of the pericardium. dph 2010-02-09T09:52:49Z epicardium development biological_process GO:0061032 visceral serous pericardium development GO:0061032 The progression of the visceral serous pericardium from its formation to the mature structure. The visceral serous pericardium is the inner layer of the pericardium. GOC:dph GOC:yaf epicardium development GOC:dph Any process that modulates the rate, frequency, or extent of cartilage development, the process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate. dph 2010-02-09T03:41:35Z biological_process GO:0061035 regulation of cartilage development GO:0061035 Any process that modulates the rate, frequency, or extent of cartilage development, the process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate. GOC:dph Any process that increases the rate, frequency, or extent of cartilage development, the process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate. dph 2010-02-09T03:41:35Z biological_process GO:0061036 positive regulation of cartilage development GO:0061036 Any process that increases the rate, frequency, or extent of cartilage development, the process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate. GOC:dph Any process that decreases the rate, frequency, or extent of cartilage development, the process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate. dph 2010-02-09T03:41:35Z biological_process GO:0061037 negative regulation of cartilage development GO:0061037 Any process that decreases the rate, frequency, or extent of cartilage development, the process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate. GOC:dph The process in which a female gonad is generated and organized. dph 2010-02-22T11:29:28Z biological_process ovary morphogenesis GO:0061040 female gonad morphogenesis GO:0061040 The process in which a female gonad is generated and organized. GOC:BHF GOC:dph ovary morphogenesis GOC:dph GOC:tb Any process that modulates the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units. dph 2010-02-25T10:41:38Z biological_process GO:0061046 regulation of branching involved in lung morphogenesis GO:0061046 Any process that modulates the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units. GOC:dph GOC:yaf Any process that increases the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units. dph 2010-02-25T10:50:01Z biological_process GO:0061047 positive regulation of branching involved in lung morphogenesis GO:0061047 Any process that increases the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units. GOC:dph GOC:yaf Any process that decreases the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units. dph 2010-02-25T10:51:31Z biological_process GO:0061048 negative regulation of branching involved in lung morphogenesis GO:0061048 Any process that decreases the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units. GOC:dph GOC:yaf The growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state. dph 2010-02-25T12:56:07Z biological_process cardiac muscle cell hypertrophy cardiomyocyte growth heart muscle cell growth GO:0061049 cell growth involved in cardiac muscle cell development GO:0061049 The growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state. GOC:dph cardiac muscle cell hypertrophy GOC:dph cardiomyocyte growth GOC:dph heart muscle cell growth GOC:dph Any process that modulates the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state. dph 2010-02-25T01:05:16Z biological_process GO:0061050 regulation of cell growth involved in cardiac muscle cell development GO:0061050 Any process that modulates the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state. GOC:dph Any process that increases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state. dph 2010-02-25T01:08:08Z biological_process GO:0061051 positive regulation of cell growth involved in cardiac muscle cell development GO:0061051 Any process that increases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state. GOC:dph Any process that decreases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state. dph 2010-02-25T01:11:30Z biological_process GO:0061052 negative regulation of cell growth involved in cardiac muscle cell development GO:0061052 Any process that decreases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state. GOC:dph The progression of a somite from its initial formation to the mature structure. Somites are mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo. dph 2010-03-02T12:05:13Z biological_process GO:0061053 somite development GO:0061053 The progression of a somite from its initial formation to the mature structure. Somites are mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo. GOC:dph The progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin. dph 2010-03-02T12:07:37Z biological_process GO:0061054 dermatome development GO:0061054 The progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin. GOC:dph The progression of the myotome over time, from its formation to the mature structure. The myotome is the portion of the somite that will give rise to muscle. dph 2010-03-02T12:11:01Z biological_process GO:0061055 myotome development GO:0061055 The progression of the myotome over time, from its formation to the mature structure. The myotome is the portion of the somite that will give rise to muscle. GOC:dph The progression of the sclerotome over time, from its initial formation to the mature structure. The sclerotome is the portion of the somite that will give rise to a vertebra. dph 2010-03-02T12:12:40Z biological_process GO:0061056 sclerotome development GO:0061056 The progression of the sclerotome over time, from its initial formation to the mature structure. The sclerotome is the portion of the somite that will give rise to a vertebra. GOC:dph The progression of a muscle structure over time, from its formation to its mature state. Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms. dph 2010-03-09T08:55:14Z biological_process GO:0061061 muscle structure development GO:0061061 The progression of a muscle structure over time, from its formation to its mature state. Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms. GOC:dph The process in which the iris is generated and organized. The iris is an anatomical structure in the eye whose opening forms the pupil. The iris is responsible for controlling the diameter and size of the pupil and the amount of light reaching the retina. dph 2010-03-16T10:48:42Z biological_process GO:0061072 iris morphogenesis GO:0061072 The process in which the iris is generated and organized. The iris is an anatomical structure in the eye whose opening forms the pupil. The iris is responsible for controlling the diameter and size of the pupil and the amount of light reaching the retina. GOC:dph The process in which the ciliary body generated and organized. The ciliary body is the circumferential tissue inside the eye composed of the ciliary muscle and ciliary processes. dph 2010-03-16T10:55:19Z biological_process GO:0061073 ciliary body morphogenesis GO:0061073 The process in which the ciliary body generated and organized. The ciliary body is the circumferential tissue inside the eye composed of the ciliary muscle and ciliary processes. GOC:dph Any process that modulates the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells. dph 2010-03-16T11:47:05Z biological_process GO:0061074 regulation of neural retina development GO:0061074 Any process that modulates the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells. GOC:dph Any process that increases the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells. dph 2010-03-16T11:59:48Z biological_process GO:0061075 positive regulation of neural retina development GO:0061075 Any process that increases the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells. GOC:dph Any process that decreases the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells. dph 2010-03-16T12:46:11Z biological_process GO:0061076 negative regulation of neural retina development GO:0061076 Any process that decreases the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells. GOC:dph The progression of the right horn of the sinus venosus from its formation to the mature structure. dph 2010-04-08T02:45:10Z biological_process GO:0061080 right horn of sinus venosus development GO:0061080 The progression of the right horn of the sinus venosus from its formation to the mature structure. GOC:dph The process in which a relatively unspecialized cell acquires specialized features of a neuroendocrine cell of the lung epithelium. dph 2010-04-27T03:28:46Z biological_process GO:0061100 lung neuroendocrine cell differentiation GO:0061100 The process in which a relatively unspecialized cell acquires specialized features of a neuroendocrine cell of the lung epithelium. GOC:dph PMID:9126746 The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a neuroendocrine cell. A neuroendocrine cell is a cell that receives input form a neuron which controls the secretion of an endocrine substance. dph 2010-04-28T09:42:20Z biological_process GO:0061101 neuroendocrine cell differentiation GO:0061101 The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a neuroendocrine cell. A neuroendocrine cell is a cell that receives input form a neuron which controls the secretion of an endocrine substance. GOC:dph The process in which a relatively unspecialized cell acquires specialized features of a neuroendocrine cell of the stomach epithelium. dph 2010-04-28T09:47:07Z biological_process gastric neuroendocrine cell differentiation GO:0061102 stomach neuroendocrine cell differentiation GO:0061102 The process in which a relatively unspecialized cell acquires specialized features of a neuroendocrine cell of the stomach epithelium. GOC:dph PMID:18173746 gastric neuroendocrine cell differentiation GOC:dph Any process that modulates the rate, frequency or extent of the differentiation of a neuroendocrine cell in the stomach. dph 2010-04-29T12:19:37Z biological_process GO:0061105 regulation of stomach neuroendocrine cell differentiation GO:0061105 Any process that modulates the rate, frequency or extent of the differentiation of a neuroendocrine cell in the stomach. GOC:dph Any process that decreases the rate, frequency or extent of the differentiation of a neuroendocrine cell in the stomach. dph 2010-04-29T12:23:05Z biological_process GO:0061106 negative regulation of stomach neuroendocrine cell differentiation GO:0061106 Any process that decreases the rate, frequency or extent of the differentiation of a neuroendocrine cell in the stomach. GOC:dph A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a dense core granule. A dense core granule is a secretory organelle found in endocrine cells. dph 2010-05-01T09:34:37Z dense core granule organisation biological_process GO:0061109 dense core granule organization GO:0061109 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a dense core granule. A dense core granule is a secretory organelle found in endocrine cells. GOC:dph dense core granule organisation GOC:mah Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell and contributes to the progression of the lung over time from its initial formation to the mature organ. dph 2010-05-05T11:14:38Z epithelial-mesenchymal cell signalling involved in lung development biological_process GO:0061111 epithelial-mesenchymal cell signaling involved in lung development GO:0061111 Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell and contributes to the progression of the lung over time from its initial formation to the mature organ. GOC:dph epithelial-mesenchymal cell signalling involved in lung development GOC:mah Any process that decreases the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart. dph 2010-05-17T07:31:28Z biological_process GO:0061117 negative regulation of heart growth GO:0061117 Any process that decreases the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart. GOC:dph GOC:hjd The process in which the anatomical structures of a branched epithelium are generated and organized. dph 2010-05-25T09:05:34Z biological_process GO:0061138 morphogenesis of a branching epithelium GO:0061138 The process in which the anatomical structures of a branched epithelium are generated and organized. GOC:dph The process in which a relatively unspecialized cell acquires specialized features of a lung secretory cell. A lung secretory cell is a specialized epithelial cell of the lung that contains large secretory granules in its apical part. dph 2010-05-25T09:28:53Z biological_process GO:0061140 lung secretory cell differentiation GO:0061140 The process in which a relatively unspecialized cell acquires specialized features of a lung secretory cell. A lung secretory cell is a specialized epithelial cell of the lung that contains large secretory granules in its apical part. GOC:dph The process in which a relatively unspecialized cell acquires specialized features of a lung ciliated cell. A lung ciliated cell is a specialized lung epithelial cell that contains cilia for moving substances released from lung secretory cells. dph 2010-05-25T09:31:14Z biological_process GO:0061141 lung ciliated cell differentiation GO:0061141 The process in which a relatively unspecialized cell acquires specialized features of a lung ciliated cell. A lung ciliated cell is a specialized lung epithelial cell that contains cilia for moving substances released from lung secretory cells. GOC:cilia GOC:dph GOC:krc The progression of the endocardial endothelium over time, from its initial formation to the mature structure. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers. dph 2010-06-03T09:15:31Z biological_process GO:0061147 endocardial endothelium development GO:0061147 The progression of the endocardial endothelium over time, from its initial formation to the mature structure. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers. GOC:dph A process which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix of the endocardium. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers. dph 2010-06-03T09:18:02Z extracellular matrix organisation involved in endocardium development biological_process GO:0061148 extracellular matrix organization involved in endocardium development GO:0061148 A process which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix of the endocardium. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers. GOC:dph extracellular matrix organisation involved in endocardium development GOC:mah The progression of the trachea submucosa over time from its formation to the mature structure. The trachea submucosa is made up of the glands and elastic tissue that lie under the mucosa in the trachea. dph 2010-06-07T09:58:40Z biological_process GO:0061152 trachea submucosa development GO:0061152 The progression of the trachea submucosa over time from its formation to the mature structure. The trachea submucosa is made up of the glands and elastic tissue that lie under the mucosa in the trachea. GOC:dph GOC:yaf The process in which the anatomical structures of a tube are generated and organized from an endothelium. Endothelium refers to the layer of cells lining blood vessels, lymphatics, the heart, and serous cavities, and is derived from bone marrow or mesoderm. Corneal endothelium is a special case, derived from neural crest cells. dph 2010-06-15T09:05:00Z biological_process GO:0061154 endothelial tube morphogenesis GO:0061154 The process in which the anatomical structures of a tube are generated and organized from an endothelium. Endothelium refers to the layer of cells lining blood vessels, lymphatics, the heart, and serous cavities, and is derived from bone marrow or mesoderm. Corneal endothelium is a special case, derived from neural crest cells. GOC:dph GOC:yaf The process in which the anatomical structures of a tube are generated and organized from the pulmonary artery endothelium. An pulmonary artery endothelium is an epithelium that lines the pulmonary artery. dph 2010-06-15T09:09:04Z biological_process GO:0061155 pulmonary artery endothelial tube morphogenesis GO:0061155 The process in which the anatomical structures of a tube are generated and organized from the pulmonary artery endothelium. An pulmonary artery endothelium is an epithelium that lines the pulmonary artery. GOC:dph GOC:yaf The process in which the anatomical structures of the pulmonary artery are generated and organized. The pulmonary artery is the artery that carries blood from the heart to the lungs. dph 2010-06-15T09:13:47Z biological_process GO:0061156 pulmonary artery morphogenesis GO:0061156 The process in which the anatomical structures of the pulmonary artery are generated and organized. The pulmonary artery is the artery that carries blood from the heart to the lungs. GOC:dph GOC:yaf Any process that modulates the rate, frequency, or extent of the process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate. dph 2010-07-14T08:28:52Z biological_process GO:0061181 regulation of chondrocyte development GO:0061181 Any process that modulates the rate, frequency, or extent of the process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate. GOC:BHF GOC:dph Any process that decreases the rate, frequency, or extent of the process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate. dph 2010-07-14T08:33:05Z biological_process GO:0061182 negative regulation of chondrocyte development GO:0061182 Any process that decreases the rate, frequency, or extent of the process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate. GOC:BHF GOC:dph Any process that modulates the rate, frequency, or extent of the progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin. dph 2010-07-14T08:40:26Z biological_process GO:0061183 regulation of dermatome development GO:0061183 Any process that modulates the rate, frequency, or extent of the progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin. GOC:BHF GOC:dph Any process that increases the rate, frequency, or extent of the progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin. dph 2010-07-14T08:42:03Z biological_process GO:0061184 positive regulation of dermatome development GO:0061184 Any process that increases the rate, frequency, or extent of the progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin. GOC:BHF GOC:dph Any process that decreases the rate, frequency, or extent of the progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin. dph 2010-07-14T08:43:08Z biological_process GO:0061185 negative regulation of dermatome development GO:0061185 Any process that decreases the rate, frequency, or extent of the progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin. GOC:BHF GOC:dph Any process that increases the rate, frequency, or extent of the progression of the sclerotome over time, from its initial formation to the mature structure. The sclerotome is the portion of the somite that will give rise to a vertebra. dph 2010-07-14T09:17:23Z biological_process GO:0061189 positive regulation of sclerotome development GO:0061189 Any process that increases the rate, frequency, or extent of the progression of the sclerotome over time, from its initial formation to the mature structure. The sclerotome is the portion of the somite that will give rise to a vertebra. GOC:BHF GOC:dph Any process that modulates the rate, frequency, or extent of the progression of the sclerotome over time, from its initial formation to the mature structure. The sclerotome is the portion of the somite that will give rise to a vertebra. dph 2010-07-14T09:19:47Z biological_process GO:0061190 regulation of sclerotome development GO:0061190 Any process that modulates the rate, frequency, or extent of the progression of the sclerotome over time, from its initial formation to the mature structure. The sclerotome is the portion of the somite that will give rise to a vertebra. GOC:dph The progression of the taste bud over time, from its formation to the mature state. The taste bud is a specialized area of the tongue that contains taste receptors. dph 2010-07-27T10:55:08Z biological_process GO:0061193 taste bud development GO:0061193 The progression of the taste bud over time, from its formation to the mature state. The taste bud is a specialized area of the tongue that contains taste receptors. GOC:dph The process in which the anatomical structures of the taste bud are generated and organized. The taste bud is a specialized area of the tongue that contains taste receptors. dph 2010-07-27T11:01:31Z biological_process GO:0061194 taste bud morphogenesis GO:0061194 The process in which the anatomical structures of the taste bud are generated and organized. The taste bud is a specialized area of the tongue that contains taste receptors. GOC:dph The developmental process pertaining to the initial formation of the taste bud from unspecified parts. The taste bud is a specialized area of the tongue that contains taste receptors. dph 2010-07-27T12:22:26Z biological_process GO:0061195 taste bud formation GO:0061195 The developmental process pertaining to the initial formation of the taste bud from unspecified parts. The taste bud is a specialized area of the tongue that contains taste receptors. GOC:dph The process whose specific outcome is the progression of the vasculature of the retina over time, from its formation to the mature structure. dph 2010-09-06T03:27:06Z retinal vasculature development biological_process GO:0061298 retina vasculature development in camera-type eye GO:0061298 The process whose specific outcome is the progression of the vasculature of the retina over time, from its formation to the mature structure. GOC:BHF GOC:dph retinal vasculature development GOC:dph The process in which the vasculature of the retina is generated and organized. dph 2010-09-06T03:28:25Z retinal vasculature morphogenesis biological_process GO:0061299 retina vasculature morphogenesis in camera-type eye GO:0061299 The process in which the vasculature of the retina is generated and organized. GOC:BHF GOC:dph retinal vasculature morphogenesis GOC:dph The progression of the cornea over time, from its formation to the mature structure. The cornea is the transparent structure that covers the anterior of the eye. dph 2010-09-14T02:09:08Z biological_process GO:0061303 cornea development in camera-type eye GO:0061303 The progression of the cornea over time, from its formation to the mature structure. The cornea is the transparent structure that covers the anterior of the eye. GOC:dph The process whose specific outcome is the progression of a blood vessel of the retina over time, from its formation to the mature structure. dph 2010-09-16T09:02:59Z biological_process GO:0061304 retinal blood vessel morphogenesis GO:0061304 The process whose specific outcome is the progression of a blood vessel of the retina over time, from its formation to the mature structure. GOC:BHF GOC:dph The process in which a relatively unspecialized cell acquires specialized features of a cardiac neural crest cell that will migrate to the heart and contribute to its development. Cardiac neural crest cells are specialized cells that migrate toward the heart from the third, fourth and sixth pharyngeal arches. dph 2010-09-23T08:50:56Z biological_process GO:0061307 cardiac neural crest cell differentiation involved in heart development GO:0061307 The process in which a relatively unspecialized cell acquires specialized features of a cardiac neural crest cell that will migrate to the heart and contribute to its development. Cardiac neural crest cells are specialized cells that migrate toward the heart from the third, fourth and sixth pharyngeal arches. GOC:dph GOC:mtg_heart PMID:19705442 The process aimed at the progression of a cardiac neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell that contributes to the development of the heart. dph 2010-09-23T09:01:49Z biological_process GO:0061308 cardiac neural crest cell development involved in heart development GO:0061308 The process aimed at the progression of a cardiac neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell that contributes to the development of the heart. GOC:dph GOC:mtg_heart The process aimed at the progression of a cardiac neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell that contributes to the shaping of the outflow tract. dph 2010-09-23T09:08:37Z biological_process GO:0061309 cardiac neural crest cell development involved in outflow tract morphogenesis GO:0061309 The process aimed at the progression of a cardiac neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell that contributes to the shaping of the outflow tract. GOC:dph GOC:mtg_heart The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to the shaping of the heart. dph 2010-09-28T09:05:26Z biological_process GO:0061323 cell proliferation involved in heart morphogenesis GO:0061323 The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to the shaping of the heart. GOC:dph GOC:mtg_heart The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to the shaping of the outflow tract. dph 2010-09-28T09:29:30Z biological_process GO:0061325 cell proliferation involved in outflow tract morphogenesis GO:0061325 The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to the shaping of the outflow tract. GOC:dph GOC:mtg_heart Transfer of an organized electrical impulse across the heart to coordinate the contraction of cardiac muscles. The process begins with generation of an action potential (in the sinoatrial node (SA) in humans) and ends with a change in the rate, frequency, or extent of the contraction of the heart muscles. dph 2010-09-29T08:46:05Z Reactome:R-HSA-5576891 biological_process GO:0061337 cardiac conduction GO:0061337 Transfer of an organized electrical impulse across the heart to coordinate the contraction of cardiac muscles. The process begins with generation of an action potential (in the sinoatrial node (SA) in humans) and ends with a change in the rate, frequency, or extent of the contraction of the heart muscles. GOC:dph Reactome:R-HSA-5576891 Cardiac conduction The multiplication or reproduction of neural precursor cells, resulting in the expansion of a cell population. A neural precursor cell is either a nervous system stem cell or a nervous system progenitor cell. dph 2010-10-01T11:06:04Z biological_process GO:0061351 neural precursor cell proliferation GO:0061351 The multiplication or reproduction of neural precursor cells, resulting in the expansion of a cell population. A neural precursor cell is either a nervous system stem cell or a nervous system progenitor cell. GOC:dph GOC:yaf The multiplication or reproduction of fibroblasts, resulting in the expansion of a fibroblast population that contributes to the shaping of the heart. dph 2011-02-10T01:41:59Z biological_process GO:0061385 fibroblast proliferation involved in heart morphogenesis GO:0061385 The multiplication or reproduction of fibroblasts, resulting in the expansion of a fibroblast population that contributes to the shaping of the heart. GOC:dph The progression of a connective tissue over time, from its formation to the mature structure. dph 2012-03-22T12:53:41Z biological_process GO:0061448 connective tissue development GO:0061448 The progression of a connective tissue over time, from its formation to the mature structure. GOC:BHF Trophoblast cell migration that is accomplished by extension and retraction of a pseudopodium. Trophoblast cells line the outside of the blastocyst. dph 2012-07-10T08:38:37Z biological_process GO:0061450 trophoblast cell migration GO:0061450 Trophoblast cell migration that is accomplished by extension and retraction of a pseudopodium. Trophoblast cells line the outside of the blastocyst. GOC:dph The progression of the reproductive system over time from its formation to the mature structure. The reproductive system consists of the organs that function in reproduction. dph 2012-08-22T17:47:53Z biological_process GO:0061458 reproductive system development GO:0061458 The progression of the reproductive system over time from its formation to the mature structure. The reproductive system consists of the organs that function in reproduction. GOC:dph Any biological process involved in the maintenance of the steady-state number of hematopoietic stem cells within a population of cells. dph 2012-12-04T09:41:02Z biological_process GO:0061484 hematopoietic stem cell homeostasis GO:0061484 Any biological process involved in the maintenance of the steady-state number of hematopoietic stem cells within a population of cells. GOC:dph PMID:21508411 A process in which a protein is transported to, or maintained in, a location within a cilium. dph 2013-03-22T15:41:44Z biological_process GO:0061512 protein localization to cilium GO:0061512 A process in which a protein is transported to, or maintained in, a location within a cilium. GOC:dph The process whose specific outcome is the progression of a myeloid cell over time, from its formation to the mature structure. dph 2013-04-18T13:03:16Z biological_process GO:0061515 myeloid cell development GO:0061515 The process whose specific outcome is the progression of a myeloid cell over time, from its formation to the mature structure. GOC:dph A cellular process that results in the breakdown of a cilium. dph 2013-04-18T14:59:59Z cilium resorption biological_process GO:0061523 Note that we deem cilium and microtubule-based flagellum to be equivalent. cilium disassembly GO:0061523 A cellular process that results in the breakdown of a cilium. GOC:cilia GOC:dph PMID:17604723 PMID:27350441 cilium resorption GOC:dph The regulated release of acetylcholine by a cell. dph 2013-06-21T15:40:39Z biological_process GO:0061526 acetylcholine secretion GO:0061526 The regulated release of acetylcholine by a cell. GOC:dph The regulated release of norepinephrine by a cell, in which the norepinephrine acts as a neurotransmitter. dph 2013-06-21T16:05:08Z noradrenaline secretion, neurotransmission biological_process GO:0061533 norepinephrine secretion, neurotransmission GO:0061533 The regulated release of norepinephrine by a cell, in which the norepinephrine acts as a neurotransmitter. GOC:dph noradrenaline secretion, neurotransmission GOC:dph The process whose specific outcome is the progression of a ganglion over time, from its formation to the mature structure. dph 2013-07-10T08:36:12Z gangliogenesis biological_process ganglia development GO:0061548 ganglion development GO:0061548 The process whose specific outcome is the progression of a ganglion over time, from its formation to the mature structure. GOC:dph gangliogenesis GOC:BHF GOC:rl ganglia development GOC:dph The process whose specific outcome is the progression of a sympathetic ganglion over time, from its formation to the mature structure. dph 2013-07-10T08:38:01Z biological_process sympathetic ganglia development GO:0061549 sympathetic ganglion development GO:0061549 The process whose specific outcome is the progression of a sympathetic ganglion over time, from its formation to the mature structure. GOC:BHF GOC:rl sympathetic ganglia development GOC:dph The process whose specific outcome is the progression of a cranial ganglion over time, from its formation to the mature structure. dph 2013-07-10T08:40:14Z biological_process cranial ganglia development GO:0061550 cranial ganglion development GO:0061550 The process whose specific outcome is the progression of a cranial ganglion over time, from its formation to the mature structure. GOC:dph cranial ganglia development GOC:dph The process whose specific outcome is the progression of a trigeminal ganglion over time, from its formation to the mature structure. dph 2013-07-10T08:42:19Z biological_process trigeminal ganglia development GO:0061551 trigeminal ganglion development GO:0061551 The process whose specific outcome is the progression of a trigeminal ganglion over time, from its formation to the mature structure. GOC:dph trigeminal ganglia development GOC:dph The process in which the anatomical structures of ganglion are generated and organized. dph 2013-07-10T08:44:57Z biological_process ganglia morphogenesis GO:0061552 ganglion morphogenesis GO:0061552 The process in which the anatomical structures of ganglion are generated and organized. GOC:dph ganglia morphogenesis GOC:dph A developmental process, independent of morphogenetic (shape) change, that is required for ganglion to attain its fully functional state. dph 2013-07-10T08:45:59Z biological_process ganglia maturation GO:0061553 ganglion maturation GO:0061553 A developmental process, independent of morphogenetic (shape) change, that is required for ganglion to attain its fully functional state. GOC:dph ganglia maturation GOC:dph The process that gives rise to ganglion. This process pertains to the initial formation of a structure from unspecified parts. dph 2013-07-10T08:51:50Z biological_process ganglia formation GO:0061554 ganglion formation GO:0061554 The process that gives rise to ganglion. This process pertains to the initial formation of a structure from unspecified parts. GOC:dph ganglia formation GOC:dph The process in which the anatomical structure of a trigeminal ganglion is generated and organized. dph 2013-07-10T08:57:12Z biological_process trigeminal ganglia morphogenesis GO:0061556 trigeminal ganglion morphogenesis GO:0061556 The process in which the anatomical structure of a trigeminal ganglion is generated and organized. GOC:dph trigeminal ganglia morphogenesis GOC:dph A developmental process, independent of morphogenetic (shape) change, that is required for a trigeminal ganglion to attain its fully functional state. dph 2013-07-10T08:58:24Z biological_process trigeminal ganglia maturation GO:0061557 trigeminal ganglion maturation GO:0061557 A developmental process, independent of morphogenetic (shape) change, that is required for a trigeminal ganglion to attain its fully functional state. GOC:dph trigeminal ganglia maturation GOC:dph A developmental process, independent of morphogenetic (shape) change, that is required for a cranial ganglion to attain its fully functional state. dph 2013-07-10T08:59:52Z biological_process cranial ganglia maturation GO:0061558 cranial ganglion maturation GO:0061558 A developmental process, independent of morphogenetic (shape) change, that is required for a cranial ganglion to attain its fully functional state. GOC:dph cranial ganglia maturation GOC:dph The process in which the anatomical structure of a cranial ganglion is generated and organized. dph 2013-07-10T09:02:15Z biological_process cranial ganglia morphogenesis GO:0061559 cranial ganglion morphogenesis GO:0061559 The process in which the anatomical structure of a cranial ganglion is generated and organized. GOC:dph cranial ganglia morphogenesis GOC:dph The process that gives rise to a cranial ganglion. This process pertains to the initial formation of a structure from unspecified parts. dph 2013-07-10T09:07:27Z biological_process cranial ganglia formation GO:0061560 cranial ganglion formation GO:0061560 The process that gives rise to a cranial ganglion. This process pertains to the initial formation of a structure from unspecified parts. GOC:dph cranial ganglia formation GOC:dph The process that gives rise to the trigeminal ganglion. This process pertains to the initial formation of a structure from unspecified parts. dph 2013-07-10T09:08:13Z biological_process trigeminal ganglia formation GO:0061561 trigeminal ganglion formation GO:0061561 The process that gives rise to the trigeminal ganglion. This process pertains to the initial formation of a structure from unspecified parts. GOC:dph trigeminal ganglia formation GOC:dph The progression of an axon over time. Covers axonogenesis (de novo generation of an axon) and axon regeneration (regrowth), as well as processes pertaining to the progression of the axon over time (fasciculation and defasciculation). dph 2013-07-18T14:43:01Z biological_process GO:0061564 axon development GO:0061564 The progression of an axon over time. Covers axonogenesis (de novo generation of an axon) and axon regeneration (regrowth), as well as processes pertaining to the progression of the axon over time (fasciculation and defasciculation). GOC:dph GOC:pg GOC:pr The orderly movement of a corneal epithelial cell from one site to another, often during the development of a multicellular organism. dph 2013-12-23T07:28:29Z biological_process GO:0061581 corneal epithelial cell migration GO:0061581 The orderly movement of a corneal epithelial cell from one site to another, often during the development of a multicellular organism. GOC:dph The process in which the anatomical structures of a pharyngeal arch artery is generated and organized. The pharyngeal arch arteries are a series of six paired embryological vascular structures, the development of which give rise to several major arteries, such as the stapedial artery, the middle meningeal artery, the internal carotid artery and the pulmonary artery. dph 2014-05-09T15:34:06Z aortic arch artery morphogenesis biological_process GO:0061626 pharyngeal arch artery morphogenesis GO:0061626 The process in which the anatomical structures of a pharyngeal arch artery is generated and organized. The pharyngeal arch arteries are a series of six paired embryological vascular structures, the development of which give rise to several major arteries, such as the stapedial artery, the middle meningeal artery, the internal carotid artery and the pulmonary artery. GOC:BHF GOC:dph PMID:20122914 aortic arch artery morphogenesis GOC:dph Steps required to transform an immature secretory vesicle into a mature secretory vesicle. Typically proceeds through homotypic membrane fusion and membrane remodeling. dph 2016-09-09T13:24:34Z biological_process GO:0061792 secretory granule maturation GO:0061792 Steps required to transform an immature secretory vesicle into a mature secretory vesicle. Typically proceeds through homotypic membrane fusion and membrane remodeling. GOC:PARL GOC:bf GOC:dph PMID:16618809 Any process in which the microtubule organizing center is transported to, and/or maintained in, a specific location within the cell. MTOC localization MTOC polarity microtubule organizing center polarity biological_process GO:0061842 microtubule organizing center localization GO:0061842 Any process in which the microtubule organizing center is transported to, and/or maintained in, a specific location within the cell. PMID:21281821 The region of the neuronal cytoplasm located in dendritic spines. cellular_component GO:0061846 dendritic spine cytoplasm GO:0061846 The region of the neuronal cytoplasm located in dendritic spines. PMID:15673667 Any process that modulates the frequency, rate or extent of neuroblast migration. dph 2017-03-08T18:17:07Z biological_process GO:0061853 regulation of neuroblast migration GO:0061853 Any process that modulates the frequency, rate or extent of neuroblast migration. PMID:23149556 Any process that activates or increases the frequency, rate or extent of neuroblast migration. dph 2017-03-08T18:22:30Z biological_process GO:0061854 positive regulation of neuroblast migration GO:0061854 Any process that activates or increases the frequency, rate or extent of neuroblast migration. PMID:23149556 Any process that stops, prevents, or reduces the frequency, rate or extent of neuroblast migration. dph 2017-03-08T18:26:21Z biological_process GO:0061855 negative regulation of neuroblast migration GO:0061855 Any process that stops, prevents, or reduces the frequency, rate or extent of neuroblast migration. PMID:23149556 A change in morphology and behavior of a glial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor. dph 2017-06-13T13:06:23Z biological_process GO:0061900 glial cell activation GO:0061900 A change in morphology and behavior of a glial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor. GOC:aruk GOC:bc PMID:18723082 A process in which a protein is transported to or maintained in a location within the somatodendritic compartment. dph 2017-09-08T13:22:26Z somatodendritic protein localization biological_process GO:0061938 protein localization to somatodendritic compartment GO:0061938 A process in which a protein is transported to or maintained in a location within the somatodendritic compartment. PMID:18341993 The directed movement of a protein to a specific location in a plasma membrane. dph 2017-10-26T12:55:15Z biological_process GO:0061951 establishment of protein localization to plasma membrane GO:0061951 The directed movement of a protein to a specific location in a plasma membrane. GOC:dph GOC:vw The process in which bones are generated and organized as a result of the conversion of another structural tissue into bone. dph 2018-02-12T18:10:59Z biological_process GO:0061971 replacement bone morphogenesis GO:0061971 The process in which bones are generated and organized as a result of the conversion of another structural tissue into bone. PMID:29852585 The process in which bone which forms superficially in the organism are generated and organized. dph 2018-02-12T18:16:21Z biological_process GO:0061972 dermal bone morphogenesis GO:0061972 The process in which bone which forms superficially in the organism are generated and organized. PMID:12588850 PMID:15003632 The process in which bone which forms deep in the organism are generated and organized. dph 2018-02-12T18:21:09Z biological_process GO:0061973 membrane bone morphogenesis GO:0061973 The process in which bone which forms deep in the organism are generated and organized. PMID:14579374 Any process that modulates the rate, frequency or extent of a small molecule metabolic process. dph 2018-03-19T14:11:54Z Reactome:R-HSA-9861718 regulation of small molecule metabolism biological_process GO:0062012 regulation of small molecule metabolic process GO:0062012 Any process that modulates the rate, frequency or extent of a small molecule metabolic process. GOC:vw Reactome:R-HSA-9861718 Regulation of pyruvate metabolism Any process that activates or increases the frequency, rate or extent of a small molecule metabolic process. dph 2018-03-19T14:25:10Z positive regulation of small molecule metabolism biological_process GO:0062013 positive regulation of small molecule metabolic process GO:0062013 Any process that activates or increases the frequency, rate or extent of a small molecule metabolic process. GOC:vw Any process that stops, prevents or reduces the frequency, rate or extent of a small molecule metabolic process. dph 2018-03-19T14:27:23Z negative regulation of small molecule metabolism biological_process GO:0062014 negative regulation of small molecule metabolic process GO:0062014 Any process that stops, prevents or reduces the frequency, rate or extent of a small molecule metabolic process. GOC:vw An extracellular matrix consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that provides not only essential physical scaffolding for the cellular constituents but can also initiate crucial biochemical and biomechanical cues required for tissue morphogenesis, differentiation and homeostasis. The components are secreted by cells in the vicinity and form a sheet underlying or overlying cells such as endothelial and epithelial cells. dph 2018-04-13T12:47:21Z collagen-containing ECM cellular_component GO:0062023 collagen-containing extracellular matrix GO:0062023 An extracellular matrix consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that provides not only essential physical scaffolding for the cellular constituents but can also initiate crucial biochemical and biomechanical cues required for tissue morphogenesis, differentiation and homeostasis. The components are secreted by cells in the vicinity and form a sheet underlying or overlying cells such as endothelial and epithelial cells. GOC:BHF GOC:rph PMID:21123617 Any process that starts or increases the frequency, rate or extent of sister chromatid segregation during mitosis. dph 2018-04-23T14:32:23Z biological_process GO:0062033 positive regulation of mitotic sister chromatid segregation GO:0062033 Any process that starts or increases the frequency, rate or extent of sister chromatid segregation during mitosis. PMID:12773390 The process whose specific outcome is the progression of the stomach over time, from its formation to the mature structure. The stomach is an expanded region of the vertebrate alimentary tract that serves as a food storage compartment and digestive organ. dph 2018-11-20T18:15:45Z biological_process GO:0062094 stomach development GO:0062094 The process whose specific outcome is the progression of the stomach over time, from its formation to the mature structure. The stomach is an expanded region of the vertebrate alimentary tract that serves as a food storage compartment and digestive organ. PMID:11967278 The series of events involved in the perception of pain in which a stimulus is received and converted into a molecular signal. dph 2019-09-13T13:48:47Z biological_process GO:0062149 detection of stimulus involved in sensory perception of pain GO:0062149 The series of events involved in the perception of pain in which a stimulus is received and converted into a molecular signal. PMID:19837031 Any process in which a protein is transported to, and/or maintained at the postsynapse, the part of a synapse that is part of the post-synaptic cell. dph 2020-04-20T13:58:43Z biological_process GO:0062237 protein localization to postsynapse GO:0062237 Any process in which a protein is transported to, and/or maintained at the postsynapse, the part of a synapse that is part of the post-synaptic cell. PMID:31189538 The directed movement of proteins in a cell, from one side of a membrane to another by means of some agent such as a transporter or pore. intracellular membrane translocation of a protein intracellular protein membrane transport intracellular protein transport across a membrane biological_process GO:0065002 Note that this term is not intended for use in annotating lateral movement within membranes. intracellular protein transmembrane transport GO:0065002 The directed movement of proteins in a cell, from one side of a membrane to another by means of some agent such as a transporter or pore. GOC:isa_complete The aggregation, arrangement and bonding together of a set of macromolecules to form a protein-containing complex. GO:0006461 GO:0034622 GO:0043623 cellular protein complex assembly biological_process cellular macromolecule complex assembly cellular protein-containing complex assembly chaperone activity macromolecular complex assembly macromolecule complex assembly protein complex assembly protein complex formation GO:0065003 protein-containing complex assembly GO:0065003 The aggregation, arrangement and bonding together of a set of macromolecules to form a protein-containing complex. GOC:jl Any process that modulates a measurable attribute of any biological process, quality or function. regulation biological_process GO:0065007 biological regulation GO:0065007 Any process that modulates a measurable attribute of any biological process, quality or function. GOC:dph GOC:isa_complete GOC:mah GOC:pr GOC:vw Any process that modulates a qualitative or quantitative trait of a biological quality. A biological quality is a measurable attribute of an organism or part of an organism, such as size, mass, shape, color, etc. regulation of biological attribute regulation of biological characteristic biological_process GO:0065008 regulation of biological quality GO:0065008 Any process that modulates a qualitative or quantitative trait of a biological quality. A biological quality is a measurable attribute of an organism or part of an organism, such as size, mass, shape, color, etc. GOC:dph GOC:isa_complete GOC:mah GOC:pr GOC:vw Organized structure of distinctive morphology and function, bounded by a lipid bilayer membrane and occurring outside the cell. extracellular membrane-enclosed organelle cellular_component GO:0065010 extracellular membrane-bounded organelle GO:0065010 Organized structure of distinctive morphology and function, bounded by a lipid bilayer membrane and occurring outside the cell. GOC:isa_complete An organelle lumen that is part of an intracellular organelle. cellular_component GO:0070013 intracellular organelle lumen GO:0070013 An organelle lumen that is part of an intracellular organelle. GOC:mah The cellular homeostatic process that preserves a neuron in a stable, differentiated functional and structural state. neuron maintenance biological_process GO:0070050 neuron cellular homeostasis GO:0070050 The cellular homeostatic process that preserves a neuron in a stable, differentiated functional and structural state. GOC:BHF GOC:mah A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. exosome extracellular vesicular exosome cellular_component GO:0070062 extracellular exosome GO:0070062 A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. GOC:BHF GOC:mah GOC:vesicles PMID:15908444 PMID:17641064 PMID:19442504 PMID:19498381 PMID:22418571 PMID:24009894 exosome GOC:pr extracellular vesicular exosome GOC:vesicles The regulated release of glucagon from secretory granules in the A (alpha) cells of the pancreas (islets of Langerhans). biological_process GO:0070091 glucagon secretion GO:0070091 The regulated release of glucagon from secretory granules in the A (alpha) cells of the pancreas (islets of Langerhans). GOC:BHF GOC:rl Any process that modulates the frequency, rate or extent of the regulated release of glucagon. biological_process GO:0070092 regulation of glucagon secretion GO:0070092 Any process that modulates the frequency, rate or extent of the regulated release of glucagon. GOC:BHF GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of glucagon. down regulation of glucagon secretion down-regulation of glucagon secretion downregulation of glucagon secretion inhibition of glucagon secretion biological_process GO:0070093 negative regulation of glucagon secretion GO:0070093 Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of glucagon. GOC:BHF GOC:mah Any process that activates or increases the frequency, rate or extent of the regulated release of glucagon. up regulation of glucagon secretion up-regulation of glucagon secretion upregulation of glucagon secretion activation of glucagon secretion stimulation of glucagon secretion biological_process GO:0070094 positive regulation of glucagon secretion GO:0070094 Any process that activates or increases the frequency, rate or extent of the regulated release of glucagon. GOC:BHF GOC:mah A cell junction that mechanically attaches a cell (and its cytoskeleton) to neighboring cells or to the extracellular matrix. anchoring cell junction cellular_component GO:0070161 anchoring junction GO:0070161 A cell junction that mechanically attaches a cell (and its cytoskeleton) to neighboring cells or to the extracellular matrix. ISBN:0815332181 anchoring cell junction GOC:mah A process of chromosome organization that is involved in a meiotic cell cycle. chromosome organisation involved in meiosis meiotic chromosome organization biological_process GO:0070192 chromosome organization involved in meiotic cell cycle GO:0070192 A process of chromosome organization that is involved in a meiotic cell cycle. GOC:mah chromosome organisation involved in meiosis GOC:mah meiotic chromosome organization GOC:mah The directed movement of a protein to a specific location on a chromosome. establishment of protein localisation to chromosome biological_process GO:0070199 establishment of protein localization to chromosome GO:0070199 The directed movement of a protein to a specific location on a chromosome. GOC:BHF GOC:mah establishment of protein localisation to chromosome GOC:mah Any process that modulates the frequency, rate or extent of the directed movement of a protein to a specific location. regulation of establishment of protein localisation biological_process GO:0070201 regulation of establishment of protein localization GO:0070201 Any process that modulates the frequency, rate or extent of the directed movement of a protein to a specific location. GOC:BHF GOC:mah regulation of establishment of protein localisation GOC:mah Any process that modulates the frequency, rate or extent of the directed movement of a protein to a specific location on a chromosome. regulation of establishment of protein localisation to chromosome biological_process GO:0070202 regulation of establishment of protein localization to chromosome GO:0070202 Any process that modulates the frequency, rate or extent of the directed movement of a protein to a specific location on a chromosome. GOC:BHF GOC:mah regulation of establishment of protein localisation to chromosome GOC:mah Any apoptotic process in a lymphocyte, a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin. lymphocyte apoptosis biological_process GO:0070227 Note that a lymphocyte is a cell of the B cell, T cell, or natural killer cell lineage (CL:0000542). lymphocyte apoptotic process GO:0070227 Any apoptotic process in a lymphocyte, a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin. CL:0000542 GOC:add GOC:mtg_apoptosis ISBN:0781765196 Any process that modulates the occurrence or rate of lymphocyte death by apoptotic process. regulation of lymphocyte apoptosis biological_process GO:0070228 Note that a lymphocyte is a cell of the B cell, T cell, or natural killer cell lineage (CL:0000542). regulation of lymphocyte apoptotic process GO:0070228 Any process that modulates the occurrence or rate of lymphocyte death by apoptotic process. GOC:add GOC:mtg_apoptosis ISBN:0781765196 Any process that stops, prevents, or reduces the frequency, rate or extent of lymphocyte death by apoptotic process. down regulation of lymphocyte apoptosis down-regulation of lymphocyte apoptosis downregulation of lymphocyte apoptosis inhibition of lymphocyte apoptosis negative regulation of lymphocyte apoptosis biological_process GO:0070229 Note that a lymphocyte is a cell of the B cell, T cell, or natural killer cell lineage (CL:0000542). negative regulation of lymphocyte apoptotic process GO:0070229 Any process that stops, prevents, or reduces the frequency, rate or extent of lymphocyte death by apoptotic process. GOC:add GOC:mtg_apoptosis ISBN:0781765196 down regulation of lymphocyte apoptosis GOC:add down-regulation of lymphocyte apoptosis GOC:add downregulation of lymphocyte apoptosis GOC:add inhibition of lymphocyte apoptosis GOC:add Any process that activates or increases the frequency, rate or extent of lymphocyte death by apoptotic process. up regulation of lymphocyte apoptosis up-regulation of lymphocyte apoptosis upregulation of lymphocyte apoptosis activation of lymphocyte apoptosis positive regulation of lymphocyte apoptosis stimulation of lymphocyte apoptosis biological_process GO:0070230 Note that a lymphocyte is a cell of the B cell, T cell, or natural killer cell lineage (CL:0000542). positive regulation of lymphocyte apoptotic process GO:0070230 Any process that activates or increases the frequency, rate or extent of lymphocyte death by apoptotic process. GOC:add GOC:mtg_apoptosis ISBN:0781765196 up regulation of lymphocyte apoptosis GOC:add up-regulation of lymphocyte apoptosis GOC:add upregulation of lymphocyte apoptosis GOC:add activation of lymphocyte apoptosis GOC:add stimulation of lymphocyte apoptosis GOC:add The regulated release of somatostatin from secretory granules in the D cells of the pancreas. biological_process GO:0070253 somatostatin secretion GO:0070253 The regulated release of somatostatin from secretory granules in the D cells of the pancreas. GOC:mah The controlled release of molecules that form the extracellular matrix, including carbohydrates and glycoproteins by a cell. ECM constituent secretion ECM secretion biological_process GO:0070278 extracellular matrix constituent secretion GO:0070278 The controlled release of molecules that form the extracellular matrix, including carbohydrates and glycoproteins by a cell. GOC:mah ECM constituent secretion GOC:mah ECM secretion GOC:mah The process whose specific outcome is the progression of a pigment cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a pigment cell fate. biological_process GO:0070285 pigment cell development GO:0070285 The process whose specific outcome is the progression of a pigment cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a pigment cell fate. GOC:cvs The multiplication or reproduction of fat cells by cell division, resulting in the expansion of their population. A fat cell is an animal connective tissue cell specialized for the synthesis and storage of fat. adipocyte proliferation adipose cell proliferation biological_process GO:0070341 fat cell proliferation GO:0070341 The multiplication or reproduction of fat cells by cell division, resulting in the expansion of their population. A fat cell is an animal connective tissue cell specialized for the synthesis and storage of fat. GOC:mah GOC:sl adipocyte proliferation GOC:sl adipose cell proliferation GOC:sl Any process that modulates the frequency, rate or extent of fat cell proliferation. regulation of adipocyte proliferation regulation of adipose cell proliferation biological_process GO:0070344 regulation of fat cell proliferation GO:0070344 Any process that modulates the frequency, rate or extent of fat cell proliferation. GOC:mah GOC:sl regulation of adipocyte proliferation GOC:sl regulation of adipose cell proliferation GOC:sl Any process that stops or decreases the rate or extent of fat cell proliferation. down regulation of fat cell proliferation down-regulation of fat cell proliferation downregulation of fat cell proliferation negative regulation of adipocyte proliferation negative regulation of adipose cell proliferation inhibition of fat cell proliferation biological_process GO:0070345 negative regulation of fat cell proliferation GO:0070345 Any process that stops or decreases the rate or extent of fat cell proliferation. GOC:mah GOC:sl down regulation of fat cell proliferation GOC:mah down-regulation of fat cell proliferation GOC:mah downregulation of fat cell proliferation GOC:mah negative regulation of adipocyte proliferation GOC:sl negative regulation of adipose cell proliferation GOC:sl inhibition of fat cell proliferation GOC:mah Any process that activates or increases the rate or extent of fat cell proliferation. positive regulation of adipocyte proliferation positive regulation of adipose cell proliferation up regulation of fat cell proliferation up-regulation of fat cell proliferation upregulation of fat cell proliferation activation of fat cell proliferation stimulation of fat cell proliferation biological_process GO:0070346 positive regulation of fat cell proliferation GO:0070346 Any process that activates or increases the rate or extent of fat cell proliferation. GOC:mah GOC:sl positive regulation of adipocyte proliferation GOC:sl positive regulation of adipose cell proliferation GOC:sl up regulation of fat cell proliferation GOC:mah up-regulation of fat cell proliferation GOC:mah upregulation of fat cell proliferation GOC:mah activation of fat cell proliferation GOC:mah stimulation of fat cell proliferation GOC:mah A transport vesicle that mediates transport from an intracellular compartment to the plasma membrane, and fuses with the plasma membrane to release various cargo molecules, such as proteins or hormones, by exocytosis. exocytic constitutive secretory pathway transport vesicle exocytotic vesicle cellular_component GO:0070382 exocytic vesicle GO:0070382 A transport vesicle that mediates transport from an intracellular compartment to the plasma membrane, and fuses with the plasma membrane to release various cargo molecules, such as proteins or hormones, by exocytosis. GOC:kad GOC:mah exocytotic vesicle GOC:kad The multiplication or reproduction of oligodendrocyte progenitor cells by cell division, resulting in the expansion of their population. Oligodendrocyte progenitors give rise to oligodendrocytes, which form the insulating myelin sheath of axons in the central nervous system. oligodendrocyte precursor proliferation biological_process GO:0070444 oligodendrocyte progenitor proliferation GO:0070444 The multiplication or reproduction of oligodendrocyte progenitor cells by cell division, resulting in the expansion of their population. Oligodendrocyte progenitors give rise to oligodendrocytes, which form the insulating myelin sheath of axons in the central nervous system. GOC:mah GOC:sl PMID:15504915 oligodendrocyte precursor proliferation GOC:mah Any process that modulates the frequency, rate or extent of oligodendrocyte progenitor proliferation. regulation of oligodendrocyte precursor proliferation biological_process GO:0070445 regulation of oligodendrocyte progenitor proliferation GO:0070445 Any process that modulates the frequency, rate or extent of oligodendrocyte progenitor proliferation. GOC:mah GOC:sl regulation of oligodendrocyte precursor proliferation GOC:mah Any process that stops or decreases the rate or extent of oligodendrocyte progenitor proliferation. negative regulation of oligodendrocyte precursor proliferation biological_process GO:0070446 negative regulation of oligodendrocyte progenitor proliferation GO:0070446 Any process that stops or decreases the rate or extent of oligodendrocyte progenitor proliferation. GOC:mah GOC:sl negative regulation of oligodendrocyte precursor proliferation GOC:mah Any process that activates or increases the rate or extent of oligodendrocyte progenitor proliferation. positive regulation of oligodendrocyte precursor proliferation biological_process GO:0070447 positive regulation of oligodendrocyte progenitor proliferation GO:0070447 Any process that activates or increases the rate or extent of oligodendrocyte progenitor proliferation. GOC:mah GOC:sl positive regulation of oligodendrocyte precursor proliferation GOC:mah Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of oxygen. biological_process GO:0070482 response to oxygen levels GO:0070482 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of oxygen. GOC:BHF GOC:mah The series of events in which a stimulus indicating lowered oxygen tension is received by a cell and converted into a molecular signal. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level. detection of reduced oxygen levels biological_process GO:0070483 detection of hypoxia GO:0070483 The series of events in which a stimulus indicating lowered oxygen tension is received by a cell and converted into a molecular signal. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level. GOC:BHF GOC:mah detection of reduced oxygen levels GOC:vk Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. regulation of microtubule cytoskeleton organisation regulation of microtubule dynamics biological_process GO:0070507 regulation of microtubule cytoskeleton organization GO:0070507 Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. GOC:mah regulation of microtubule cytoskeleton organisation GOC:mah regulation of microtubule dynamics GOC:dph GOC:tb The directed movement of a substance from one side of an epithelium to the other. mah 2009-05-06T03:31:02Z biological_process GO:0070633 transepithelial transport GO:0070633 The directed movement of a substance from one side of an epithelium to the other. GOC:mah GOC:yaf ISBN:0716731363 The directed movement of ammonium ions from one side of an epithelium to the other. mah 2009-05-06T03:34:43Z biological_process GO:0070634 transepithelial ammonium transport GO:0070634 The directed movement of ammonium ions from one side of an epithelium to the other. GOC:mah GOC:yaf The expansion of a leukocyte population by cell division. mah 2009-05-28T05:25:28Z biological_process GO:0070661 leukocyte proliferation GO:0070661 The expansion of a leukocyte population by cell division. GOC:add Any process that modulates the frequency, rate or extent of leukocyte proliferation. mah 2009-05-28T05:30:39Z biological_process GO:0070663 regulation of leukocyte proliferation GO:0070663 Any process that modulates the frequency, rate or extent of leukocyte proliferation. GOC:add GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of leukocyte proliferation. mah 2009-05-28T05:34:50Z down regulation of leukocyte proliferation down-regulation of leukocyte proliferation downregulation of leukocyte proliferation inhibition of leukocyte proliferation biological_process GO:0070664 negative regulation of leukocyte proliferation GO:0070664 Any process that stops, prevents, or reduces the frequency, rate or extent of leukocyte proliferation. GOC:add GOC:mah down regulation of leukocyte proliferation GOC:mah down-regulation of leukocyte proliferation GOC:mah downregulation of leukocyte proliferation GOC:mah inhibition of leukocyte proliferation GOC:mah Any process that activates or increases the frequency, rate or extent of leukocyte proliferation. mah 2009-05-28T05:36:46Z up regulation of leukocyte proliferation up-regulation of leukocyte proliferation upregulation of leukocyte proliferation activation of leukocyte proliferation stimulation of leukocyte proliferation biological_process GO:0070665 positive regulation of leukocyte proliferation GO:0070665 Any process that activates or increases the frequency, rate or extent of leukocyte proliferation. GOC:add GOC:mah up regulation of leukocyte proliferation GOC:mah up-regulation of leukocyte proliferation GOC:mah upregulation of leukocyte proliferation GOC:mah activation of leukocyte proliferation GOC:mah stimulation of leukocyte proliferation GOC:mah Any process in which a macromolecule is transported to, and/or maintained in, a specific location at the level of a cell. Localization at the cellular level encompasses movement within the cell, from within the cell to the cell surface, or from one location to another at the surface of a cell. mah 2009-06-16T04:08:29Z cellular macromolecule localisation biological_process GO:0070727 cellular macromolecule localization GO:0070727 Any process in which a macromolecule is transported to, and/or maintained in, a specific location at the level of a cell. Localization at the cellular level encompasses movement within the cell, from within the cell to the cell surface, or from one location to another at the surface of a cell. GOC:mah cellular macromolecule localisation GOC:mah The aggregation, arrangement and bonding together of a set of components to form a basement membrane, a part of the extracellular region that consists of a thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. mah 2009-07-23T05:01:51Z biological_process GO:0070831 Note that this term has no relationship to 'membrane assembly ; GO:0071709' because the basement membrane is not a lipid bilayer. basement membrane assembly GO:0070831 The aggregation, arrangement and bonding together of a set of components to form a basement membrane, a part of the extracellular region that consists of a thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. GOC:mah The aggregation, arrangement and bonding together of a set of components to form an organelle. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. mah 2009-09-15T03:00:51Z biological_process GO:0070925 organelle assembly GO:0070925 The aggregation, arrangement and bonding together of a set of components to form an organelle. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. GOC:mah A developmental process, independent of morphogenetic (shape) change, that is required for bone to attain its fully functional state. mah 2009-10-05T04:35:31Z biological_process GO:0070977 bone maturation GO:0070977 A developmental process, independent of morphogenetic (shape) change, that is required for bone to attain its fully functional state. GOC:dph GOC:mah Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin. mah 2009-11-20T11:51:20Z protein localisation to chromatin biological_process GO:0071168 protein localization to chromatin GO:0071168 Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin. GOC:mah protein localisation to chromatin GOC:mah The directed movement of a protein to a part of a chromosome that is organized into chromatin. mah 2009-11-20T11:52:43Z establishment of protein localisation to chromatin biological_process GO:0071169 establishment of protein localization to chromatin GO:0071169 The directed movement of a protein to a part of a chromosome that is organized into chromatin. GOC:mah establishment of protein localisation to chromatin GOC:mah The expansion of a hematopoietic stem cell population by cell division. A hematopoietic stem cell is a stem cell from which all cells of the lymphoid and myeloid lineages develop. mah 2009-12-16T10:22:52Z hemopoietic stem cell proliferation biological_process GO:0071425 hematopoietic stem cell proliferation GO:0071425 The expansion of a hematopoietic stem cell population by cell division. A hematopoietic stem cell is a stem cell from which all cells of the lymphoid and myeloid lineages develop. CL:0000037 GOC:BHF GOC:add GOC:mah GOC:rl The process of biting and mashing food with the teeth prior to swallowing. mah 2010-02-10T11:19:48Z chewing biological_process GO:0071626 mastication GO:0071626 The process of biting and mashing food with the teeth prior to swallowing. GOC:gvg chewing GOC:mah The movement of a mononuclear cell within or between different tissues and organs of the body. mah 2010-02-16T02:11:00Z biological_process GO:0071674 mononuclear cell migration GO:0071674 The movement of a mononuclear cell within or between different tissues and organs of the body. GOC:mah Any process that modulates the rate, frequency or extent of mononuclear cell migration. Mononuclear cell migration is the movement of a mononuclear cell within or between different tissues and organs of the body. mah 2010-02-16T02:11:53Z biological_process GO:0071675 regulation of mononuclear cell migration GO:0071675 Any process that modulates the rate, frequency or extent of mononuclear cell migration. Mononuclear cell migration is the movement of a mononuclear cell within or between different tissues and organs of the body. GOC:mah Any process that decreases the rate, frequency or extent of mononuclear cell migration. Mononuclear cell migration is the movement of a mononuclear cell within or between different tissues and organs of the body. mah 2010-02-16T02:13:55Z down regulation of mononuclear cell migration down-regulation of mononuclear cell migration downregulation of mononuclear cell migration inhibition of mononuclear cell migration biological_process GO:0071676 negative regulation of mononuclear cell migration GO:0071676 Any process that decreases the rate, frequency or extent of mononuclear cell migration. Mononuclear cell migration is the movement of a mononuclear cell within or between different tissues and organs of the body. GOC:mah down regulation of mononuclear cell migration GOC:mah down-regulation of mononuclear cell migration GOC:mah downregulation of mononuclear cell migration GOC:mah inhibition of mononuclear cell migration GOC:mah Any process that increases the rate, frequency or extent of mononuclear cell migration. Mononuclear cell migration is the movement of a mononuclear cell within or between different tissues and organs of the body. mah 2010-02-16T02:15:29Z up regulation of mononuclear cell migration up-regulation of mononuclear cell migration upregulation of mononuclear cell migration activation of mononuclear cell migration stimulation of mononuclear cell migration biological_process GO:0071677 positive regulation of mononuclear cell migration GO:0071677 Any process that increases the rate, frequency or extent of mononuclear cell migration. Mononuclear cell migration is the movement of a mononuclear cell within or between different tissues and organs of the body. GOC:mah up regulation of mononuclear cell migration GOC:mah up-regulation of mononuclear cell migration GOC:mah upregulation of mononuclear cell migration GOC:mah activation of mononuclear cell migration GOC:mah stimulation of mononuclear cell migration GOC:mah Any process in which a protein is transported from one specific location in the extracellular region to another, or maintained in a specific extracellular location. mah 2010-02-25T04:00:13Z protein localisation in extracellular region protein localization in extracellular region biological_process GO:0071692 protein localization to extracellular region GO:0071692 Any process in which a protein is transported from one specific location in the extracellular region to another, or maintained in a specific extracellular location. GOC:mah protein localisation in extracellular region GOC:mah A developmental process, independent of morphogenetic (shape) change, that is required for an anatomical structure to attain its fully functional state. mah 2010-03-02T11:43:38Z biological_process GO:0071695 anatomical structure maturation GO:0071695 A developmental process, independent of morphogenetic (shape) change, that is required for an anatomical structure to attain its fully functional state. GOC:mah The progression of an ectodermal placode over time from its initial formation until its mature state. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm. mah 2010-03-02T11:48:01Z biological_process GO:0071696 ectodermal placode development GO:0071696 The progression of an ectodermal placode over time from its initial formation until its mature state. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm. GOC:mah The process in which the anatomical structures of an ectodermal placode are generated and organized. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm. mah 2010-03-02T11:49:51Z biological_process GO:0071697 ectodermal placode morphogenesis GO:0071697 The process in which the anatomical structures of an ectodermal placode are generated and organized. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm. GOC:mah The directed movement of nitrogen-containing compounds into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. mah 2010-03-08T03:56:28Z biological_process GO:0071705 nitrogen compound transport GO:0071705 The directed movement of nitrogen-containing compounds into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:mah The aggregation, arrangement and bonding together of a set of components to form a membrane. mah 2010-03-10T11:19:17Z biological_process GO:0071709 membrane assembly GO:0071709 The aggregation, arrangement and bonding together of a set of components to form a membrane. GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the basement membrane. mah 2010-03-10T11:57:10Z basement membrane organisation biological_process GO:0071711 Note that this term has no relationship to 'membrane organization ; GO:0061024' because the basement membrane is not a lipid bilayer. basement membrane organization GO:0071711 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the basement membrane. GOC:mah basement membrane organisation GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear inner or outer membrane. mah 2010-03-29T03:59:35Z nuclear membrane organisation biological_process nuclear membrane organization and biogenesis GO:0071763 nuclear membrane organization GO:0071763 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear inner or outer membrane. GOC:mah nuclear membrane organisation GOC:mah nuclear membrane organization and biogenesis GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear outer membrane. mah 2010-03-29T04:03:37Z nuclear outer membrane organisation biological_process nuclear outer membrane organization and biogenesis GO:0071764 nuclear outer membrane organization GO:0071764 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear outer membrane. GOC:mah nuclear outer membrane organisation GOC:mah nuclear outer membrane organization and biogenesis GOC:mah The process in which a protein is transported across a membrane. mah 2010-09-03T02:54:26Z protein membrane transport biological_process GO:0071806 Note that this term is not intended for use in annotating lateral movement within membranes. protein transmembrane transport GO:0071806 The process in which a protein is transported across a membrane. GOC:mah GOC:vw Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a ribonucleoprotein complex. mah 2010-09-08T10:10:35Z RNA-protein complex subunit organization protein-RNA complex subunit organization ribonucleoprotein complex subunit organisation ribonucleoprotein complex subunit organization biological_process GO:0071826 protein-RNA complex organization GO:0071826 Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a ribonucleoprotein complex. GOC:mah RNA-protein complex subunit organization GOC:mah protein-RNA complex subunit organization GOC:mah ribonucleoprotein complex subunit organisation GOC:mah A process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellular component. mah 2010-09-10T01:39:16Z GO:0071841 cellular component organisation or biogenesis cellular component organisation or biogenesis at cellular level cellular component organization or biogenesis at cellular level biological_process GO:0071840 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. cellular component organization or biogenesis GO:0071840 A process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellular component. GOC:mah cellular component organisation or biogenesis GOC:mah cellular component organisation or biogenesis at cellular level GOC:mah Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monoamine stimulus. A monoamine is any of a group of molecular messengers that contain one amino group that is connected to an aromatic ring by ethylene group (-CH2-CH2-). Monoamines are derived from the aromatic amino acids phenylalanine, tyrosine, histidine and tryptophan. mah 2010-09-13T02:36:37Z response to monoamine stimulus biological_process GO:0071867 response to monoamine GO:0071867 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monoamine stimulus. A monoamine is any of a group of molecular messengers that contain one amino group that is connected to an aromatic ring by ethylene group (-CH2-CH2-). Monoamines are derived from the aromatic amino acids phenylalanine, tyrosine, histidine and tryptophan. GOC:mah response to monoamine stimulus GOC:dos Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a catecholamine stimulus. A catecholamine is any of a group of biogenic amines that includes 4-(2-aminoethyl)pyrocatechol [4-(2-aminoethyl)benzene-1,2-diol] and derivatives formed by substitution. mah 2010-09-13T02:51:13Z response to catecholamine stimulus biological_process GO:0071869 response to catecholamine GO:0071869 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a catecholamine stimulus. A catecholamine is any of a group of biogenic amines that includes 4-(2-aminoethyl)pyrocatechol [4-(2-aminoethyl)benzene-1,2-diol] and derivatives formed by substitution. GOC:BHF GOC:mah response to catecholamine stimulus GOC:dos Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a norepinephrine stimulus. Norepinephrine is a catecholamine that has the formula C8H11NO3; it acts as a hormone, and as a neurotransmitter in most of the sympathetic nervous system. mah 2010-09-13T03:31:53Z response to noradrenaline stimulus response to norepinephrine stimulus biological_process GO:0071873 Note that epinephrine and norepinephrine are ligands for the same receptors, and there are multiple adrenergic receptors. response to norepinephrine GO:0071873 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a norepinephrine stimulus. Norepinephrine is a catecholamine that has the formula C8H11NO3; it acts as a hormone, and as a neurotransmitter in most of the sympathetic nervous system. GOC:BHF GOC:mah response to noradrenaline stimulus GOC:mah response to norepinephrine stimulus GOC:dos Any apoptotic process in a leukocyte, an achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue. mah 2010-09-14T12:44:09Z leukocyte apoptosis biological_process GO:0071887 Note that a lymphocyte is a cell of the B cell, T cell, or natural killer cell lineage (CL:0000542). leukocyte apoptotic process GO:0071887 Any apoptotic process in a leukocyte, an achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue. CL:0000738 GOC:BHF GOC:mah GOC:mtg_apoptosis The broad region around and including the plasma membrane of a cell, encompassing the cell cortex (inside the cell), the plasma membrane, and any external encapsulating structures. mah 2010-10-04T01:51:47Z cellular_component GO:0071944 cell periphery GO:0071944 The broad region around and including the plasma membrane of a cell, encompassing the cell cortex (inside the cell), the plasma membrane, and any external encapsulating structures. GOC:pdt An supramolecular fiber that consists of an insoluble core of polymerized tropoelastin monomers and a surrounding mantle of microfibrils. Elastic fibers provide elasticity and recoiling to tissues and organs, and maintain structural integrity against mechanical strain. mah 2010-10-11T11:44:57Z elastic fibre elastin fiber cellular_component GO:0071953 elastic fiber GO:0071953 An supramolecular fiber that consists of an insoluble core of polymerized tropoelastin monomers and a surrounding mantle of microfibrils. Elastic fibers provide elasticity and recoiling to tissues and organs, and maintain structural integrity against mechanical strain. GOC:BHF GOC:mah PMID:20236620 elastic fibre GOC:mah elastin fiber GOC:BHF The aggregation, arrangement and bonding together of a set of components to form an extracellular vesicular exosome, a membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Exosomes are defined by their size, which generally ranges from 30 nm to 100 nm. mah 2010-10-18T03:44:18Z extracellular vesicular exosome assembly biological_process GO:0071971 extracellular exosome assembly GO:0071971 The aggregation, arrangement and bonding together of a set of components to form an extracellular vesicular exosome, a membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Exosomes are defined by their size, which generally ranges from 30 nm to 100 nm. GOC:mah GOC:tfm PMID:19442504 PMID:27462458 extracellular vesicular exosome assembly GOC:vesicles The multiplication or reproduction of stem cells, resulting in the expansion of a stem cell population. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. mah 2010-02-08T02:03:36Z biological_process GO:0072089 stem cell proliferation GO:0072089 The multiplication or reproduction of stem cells, resulting in the expansion of a stem cell population. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. GOC:mtg_kidney_jan10 Any process that modulates the frequency, rate or extent of stem cell proliferation. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. mah 2010-02-08T02:09:03Z biological_process GO:0072091 regulation of stem cell proliferation GO:0072091 Any process that modulates the frequency, rate or extent of stem cell proliferation. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. GOC:mtg_kidney_jan10 The process in which the anatomical structures of a mesenchymal tissue are generated and organized. A mesenchymal tissue is made up of loosely packed stellate cells. mah 2010-02-22T02:17:15Z biological_process GO:0072132 mesenchyme morphogenesis GO:0072132 The process in which the anatomical structures of a mesenchymal tissue are generated and organized. A mesenchymal tissue is made up of loosely packed stellate cells. GOC:mtg_kidney_jan10 The developmental process pertaining to the initial formation of an epithelial tube. mah 2010-02-26T02:15:40Z biological_process GO:0072175 epithelial tube formation GO:0072175 The developmental process pertaining to the initial formation of an epithelial tube. GOC:mtg_kidney_jan10 Any process that decreases the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets. mah 2010-03-01T03:43:29Z biological_process GO:0072201 negative regulation of mesenchymal cell proliferation GO:0072201 Any process that decreases the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets. GOC:mtg_kidney_jan10 The chemical reactions and pathways resulting in the formation of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group. mah 2010-11-02T04:51:32Z monocarboxylic acid anabolism monocarboxylic acid biosynthesis monocarboxylic acid formation monocarboxylic acid synthesis biological_process GO:0072330 monocarboxylic acid biosynthetic process GO:0072330 The chemical reactions and pathways resulting in the formation of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group. GOC:mah monocarboxylic acid anabolism GOC:mah monocarboxylic acid biosynthesis GOC:mah monocarboxylic acid formation GOC:mah monocarboxylic acid synthesis GOC:mah The directed movement of compounds that contain sulfur, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. mah 2010-11-11T11:43:56Z sulfur-containing compound transport biological_process GO:0072348 sulfur compound transport GO:0072348 The directed movement of compounds that contain sulfur, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:mah sulfur-containing compound transport GOC:mah The process whose specific outcome is the progression of the circulatory system over time, from its formation to the mature structure. The circulatory system is the organ system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells, etc. to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis. mah 2010-11-16T11:27:39Z GO:0072358 cardiovascular system development biological_process GO:0072359 circulatory system development GO:0072359 The process whose specific outcome is the progression of the circulatory system over time, from its formation to the mature structure. The circulatory system is the organ system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells, etc. to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis. GOC:mah UBERON:0001009 The progression of the vascular cord over time from its initial formation until its mature state. The vascular cord is the primordial vasculature that will develop into blood vessels by the process of tubulogenesis. mah 2010-11-16T11:46:55Z biological_process GO:0072360 vascular cord development GO:0072360 The progression of the vascular cord over time from its initial formation until its mature state. The vascular cord is the primordial vasculature that will develop into blood vessels by the process of tubulogenesis. GOC:mah PMID:7084422 ZFA:0005077 The directed movement of an organelle along a microtubule, mediated by motor proteins. This process begins with the attachment of an organelle to a microtubule, and ends when the organelle reaches its final destination. mah 2010-12-01T04:59:11Z microtubule-based organelle localization biological_process GO:0072384 organelle transport along microtubule GO:0072384 The directed movement of an organelle along a microtubule, mediated by motor proteins. This process begins with the attachment of an organelle to a microtubule, and ends when the organelle reaches its final destination. GOC:mah microtubule-based organelle localization GOC:rl The process in which ammonium is transported across a membrane. Ammonium is the cation NH4+. mah 2010-12-10T10:29:57Z GO:0015696 ammonia transport ammonium transport ammonium membrane transport biological_process GO:0072488 Note that this term is not intended for use in annotating lateral movement within membranes. ammonium transmembrane transport GO:0072488 The process in which ammonium is transported across a membrane. Ammonium is the cation NH4+. GOC:mah A change in the morphology or behavior of a fibroblast resulting from exposure to an activating factor such as a cellular or soluble ligand. mah 2011-01-14T04:35:08Z biological_process GO:0072537 fibroblast activation GO:0072537 A change in the morphology or behavior of a fibroblast resulting from exposure to an activating factor such as a cellular or soluble ligand. CL:0000057 GOC:BHF GOC:mah Any apoptotic process in an endothelial cell. An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal. mah 2011-02-02T03:56:24Z apoptosis of endothelial cells endothelial cell programmed cell death by apoptosis killing of endothelial cells programmed cell death of endothelial cells by apoptosis programmed cell death, endothelial cells endothelial cell apoptosis biological_process GO:0072577 endothelial cell apoptotic process GO:0072577 Any apoptotic process in an endothelial cell. An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal. CL:0000115 GOC:BHF GOC:mah GOC:mtg_apoptosis apoptosis of endothelial cells GOC:mah endothelial cell programmed cell death by apoptosis GOC:mah killing of endothelial cells GOC:mah programmed cell death of endothelial cells by apoptosis GOC:mah programmed cell death, endothelial cells GOC:mah The chemical reactions and pathways involving diatomic oxygen (O2). mah 2011-02-11T10:46:51Z diatomic oxygen metabolic process oxygen metabolism biological_process GO:0072592 oxygen metabolic process GO:0072592 The chemical reactions and pathways involving diatomic oxygen (O2). GOC:mah diatomic oxygen metabolic process CHEBI:33263 oxygen metabolism GOC:mah The directed movement of a protein to a specific location on or in an organelle. Encompasses establishment of localization in the membrane or lumen of a membrane-bounded organelle. mah 2011-02-14T01:56:51Z establishment of protein localisation to organelle biological_process GO:0072594 establishment of protein localization to organelle GO:0072594 The directed movement of a protein to a specific location on or in an organelle. Encompasses establishment of localization in the membrane or lumen of a membrane-bounded organelle. GOC:mah establishment of protein localisation to organelle GOC:mah Any process in which a protein is maintained in a specific location a specific location on or in an organelle, and is prevented from moving elsewhere. Encompasses establishment of localization in the membrane or lumen of a membrane-bounded organelle. mah 2011-02-14T02:09:13Z maintenance of protein localisation to organelle maintenance of protein localization to organelle biological_process GO:0072595 maintenance of protein localization in organelle GO:0072595 Any process in which a protein is maintained in a specific location a specific location on or in an organelle, and is prevented from moving elsewhere. Encompasses establishment of localization in the membrane or lumen of a membrane-bounded organelle. GOC:mah maintenance of protein localisation to organelle GOC:mah A process in which a protein is transported to, or maintained in, a specific location in a membrane. mah 2011-02-14T02:35:18Z protein localisation in membrane protein localization in membrane biological_process GO:0072657 protein localization to membrane GO:0072657 A process in which a protein is transported to, or maintained in, a specific location in a membrane. GOC:mah protein localisation in membrane GOC:mah A process in which a protein is transported to, or maintained in, a specific location in the plasma membrane. tb 2009-07-10T10:29:23Z GO:0072661 GO:0090002 biological_process protein localisation in plasma membrane protein localization in plasma membrane protein targeting to plasma membrane protein-plasma membrane targeting GO:0072659 protein localization to plasma membrane GO:0072659 A process in which a protein is transported to, or maintained in, a specific location in the plasma membrane. GOC:mah protein localisation in plasma membrane GOC:mah protein-plasma membrane targeting GOC:mah A process in which a protein is transported to, or maintained at, a location in a vacuole. mah 2011-02-14T02:55:35Z protein localisation to vacuole biological_process GO:0072665 protein localization to vacuole GO:0072665 A process in which a protein is transported to, or maintained at, a location in a vacuole. GOC:ecd protein localisation to vacuole GOC:mah The directed movement of a protein to a specific location in a vacuole. mah 2011-02-14T02:56:29Z establishment of protein localisation to vacuole biological_process GO:0072666 establishment of protein localization to vacuole GO:0072666 The directed movement of a protein to a specific location in a vacuole. GOC:mah establishment of protein localisation to vacuole GOC:mah Any process in which a protein is maintained in a specific location in a vacuole, and is prevented from moving elsewhere. mah 2011-02-14T02:56:57Z biological_process GO:0072667 maintenance of protein location in vacuole GO:0072667 Any process in which a protein is maintained in a specific location in a vacuole, and is prevented from moving elsewhere. GOC:mah The movement of a lymphocyte within or between different tissues and organs of the body. mah 2011-02-22T03:38:12Z biological_process GO:0072676 lymphocyte migration GO:0072676 The movement of a lymphocyte within or between different tissues and organs of the body. CL:0000542 GOC:BHF GOC:mah A process in which a protein is transported to, or maintained in, the cell cortex. mah 2012-04-11T01:16:33Z protein localisation to cell cortex biological_process GO:0072697 protein localization to cell cortex GO:0072697 A process in which a protein is transported to, or maintained in, the cell cortex. GOC:mah protein localisation to cell cortex GOC:mah A cellular protein localization process in which a protein is transported to, or maintained at, a location within the microtubule cytoskeleton. mah 2012-04-11T01:19:35Z protein localisation to microtubule cytoskeleton biological_process GO:0072698 protein localization to microtubule cytoskeleton GO:0072698 A cellular protein localization process in which a protein is transported to, or maintained at, a location within the microtubule cytoskeleton. GOC:mah protein localisation to microtubule cytoskeleton GOC:mah Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism involving those compounds formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism. dhl 2009-04-22T04:30:52Z biological_process GO:0080090 regulation of primary metabolic process GO:0080090 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism involving those compounds formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism. PMID:19211694 Any process that modulates the frequency, rate or extent of a response to stress. Response to stress is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation). dhl 2009-05-06T04:51:28Z biological_process GO:0080134 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. regulation of response to stress GO:0080134 Any process that modulates the frequency, rate or extent of a response to stress. Response to stress is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation). GOC:dhl Any process that modulates the rate, frequency or extent of fertilization. Fertilization is the union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy). dhl 2010-09-01T03:44:27Z biological_process GO:0080154 regulation of fertilization GO:0080154 Any process that modulates the rate, frequency or extent of fertilization. Fertilization is the union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy). GOC:DHL PMID:20478994 The aggregation, arrangement and bonding together of the extracellular matrix. jl 2010-07-14T12:52:49Z biological_process GO:0085029 extracellular matrix assembly GO:0085029 The aggregation, arrangement and bonding together of the extracellular matrix. GOC:jl An action potential that occurs in a cardiac muscle cell. tb 2011-11-10T07:45:11Z biological_process GO:0086001 cardiac muscle cell action potential GO:0086001 An action potential that occurs in a cardiac muscle cell. GOC:BHF GOC:mtg_cardiac_conduct_nov11 An action potential that occurs in a sinoatrial node cardiac muscle cell. tb 2011-11-10T08:50:15Z SA node cardiac muscle cell action potential SAN cardiac muscle cell action potential sinoatrial node cardiac muscle cell action potential sinus node cardiac muscle cell action potential biological_process GO:0086015 SA node cell action potential GO:0086015 An action potential that occurs in a sinoatrial node cardiac muscle cell. GOC:BHF GOC:mtg_cardiac_conduct_nov11 An action potential that occurs in an atrioventricular node cardiac muscle cell. tb 2011-11-10T08:58:56Z AV node cardiac muscle cell action potential atrioventricular node cardiac muscle cell action potential biological_process GO:0086016 AV node cell action potential GO:0086016 An action potential that occurs in an atrioventricular node cardiac muscle cell. GOC:BHF GOC:mtg_cardiac_conduct_nov11 An action potential that occurs in a Purkinje myocyte. tb 2011-11-10T08:58:56Z biological_process GO:0086017 Purkinje myocyte action potential GO:0086017 An action potential that occurs in a Purkinje myocyte. GOC:BHF GOC:mtg_cardiac_conduct_nov11 Any process that mediates the transfer of information from an SA node cardiomyocyte to an atrial cardiomyocyte. tb 2011-11-10T09:15:01Z SA node cardiac muscle cell to atrial cardiac muscle cell signalling SA node cardiomyocyte to atrial cardiomyocyte signalling SAN cardiomyocyte to atrial cardiomyocyte signalling sinoatrial node cardiomyocyte to atrial cardiomyocyte signalling sinus node cardiomyocyte to atrial cardiomyocyte signalling biological_process GO:0086018 SA node cell to atrial cardiac muscle cell signaling GO:0086018 Any process that mediates the transfer of information from an SA node cardiomyocyte to an atrial cardiomyocyte. GOC:BHF GOC:mtg_cardiac_conduct_nov11 Any process that mediates the transfer of information from one cell to another and contributes to the heart process that regulates cardiac muscle contraction; beginning with the generation of an action potential in the sinoatrial node and ending with regulation of contraction of the myocardium. dph 2011-11-16T03:43:52Z cell-cell signalling involved in cardiac conduction biological_process GO:0086019 cell-cell signaling involved in cardiac conduction GO:0086019 Any process that mediates the transfer of information from one cell to another and contributes to the heart process that regulates cardiac muscle contraction; beginning with the generation of an action potential in the sinoatrial node and ending with regulation of contraction of the myocardium. GOC:BHF GOC:mtg_cardiac_conduct_nov11 cell-cell signalling involved in cardiac conduction GOC:mah Any process that mediates the transfer of information from an AV node cardiac muscle cell to a bundle of His cardiomyocyte. tb 2011-11-11T02:02:14Z AV node cell to bundle of His cell signalling atrioventricular node to bundle of His cell signaling biological_process GO:0086027 AV node cell to bundle of His cell signaling GO:0086027 Any process that mediates the transfer of information from an AV node cardiac muscle cell to a bundle of His cardiomyocyte. GOC:BHF GOC:mtg_cardiac_conduct_nov11 AV node cell to bundle of His cell signalling GOC:mah Any process that mediates the transfer of information from a Purkinje myocyte to a ventricular cardiac muscle cell. tb 2011-11-11T02:02:14Z Purkinje myocyte to ventricular cardiac muscle cell signalling biological_process GO:0086029 Purkinje myocyte to ventricular cardiac muscle cell signaling GO:0086029 Any process that mediates the transfer of information from a Purkinje myocyte to a ventricular cardiac muscle cell. GOC:BHF GOC:mtg_cardiac_conduct_nov11 Purkinje myocyte to ventricular cardiac muscle cell signalling GOC:mah Any process that mediates interactions between a cell and its surroundings that contributes to the process of cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. dph 2011-11-22T08:57:02Z biological_process GO:0086065 cell communication involved in cardiac conduction GO:0086065 Any process that mediates interactions between a cell and its surroundings that contributes to the process of cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. GOC:BHF GOC:mtg_cardiac_conduct_nov11 The process that mediates interactions between an AV node cell and its surroundings that contributes to the process of the AV node cell communicating with a bundle of His cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. dph 2011-11-22T09:11:44Z atrioventricular node cell to bundle of His cell communication biological_process GO:0086067 AV node cell to bundle of His cell communication GO:0086067 The process that mediates interactions between an AV node cell and its surroundings that contributes to the process of the AV node cell communicating with a bundle of His cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. GOC:BHF GOC:mtg_cardiac_conduct_nov11 The process that mediates interactions between a Purkinje myocyte and its surroundings that contributes to the process of the Purkinje myocyte communicating with a ventricular cardiac muscle cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. dph 2011-11-22T09:14:49Z biological_process GO:0086068 Purkinje myocyte to ventricular cardiac muscle cell communication GO:0086068 The process that mediates interactions between a Purkinje myocyte and its surroundings that contributes to the process of the Purkinje myocyte communicating with a ventricular cardiac muscle cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. GOC:BHF GOC:mtg_cardiac_conduct_nov11 The process that mediates interactions between an SA node cardiomyocyte and its surroundings that contributes to the process of the SA node cardiomyocyte communicating with an atrial cardiomyocyte in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. dph 2011-11-22T09:32:45Z SA node cardiac muscle cell to atrial cardiac muscle cell communication SA node cardiomyocyte to atrial cardiomyocyte communication SAN cardiomyocyte to atrial cardiomyocyte communication sinoatrial node cardiomyocyte to atrial cardiomyocyte communication sinus node cardiomyocyte to atrial cardiomyocyte communication biological_process GO:0086070 SA node cell to atrial cardiac muscle cell communication GO:0086070 The process that mediates interactions between an SA node cardiomyocyte and its surroundings that contributes to the process of the SA node cardiomyocyte communicating with an atrial cardiomyocyte in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. GOC:BHF GOC:mtg_cardiac_conduct_nov11 The directed movement of an amino acid from outside of a cell, across the plasma membrane and into the cytosol. jl 2012-11-14T14:21:41Z GO:0043092 GO:0044745 GO:1902837 L-amino acid import amino acid transmembrane import amino acid import into cell L-amino acid uptake biological_process GO:0089718 amino acid import across plasma membrane GO:0089718 The directed movement of an amino acid from outside of a cell, across the plasma membrane and into the cytosol. GOC:krc PMID:8195186 Any process that increases the rate, frequency or extent of microtubule nucleation. Microtubule nucleation is the 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell. tb 2009-08-12T11:33:09Z biological_process GO:0090063 positive regulation of microtubule nucleation GO:0090063 Any process that increases the rate, frequency or extent of microtubule nucleation. Microtubule nucleation is the 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell. GOC:dph GOC:tb Any process that increases the rate, frequency or extent of a cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. tb 2009-09-09T11:39:52Z biological_process GO:0090068 positive regulation of cell cycle process GO:0090068 Any process that increases the rate, frequency or extent of a cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. GOC:dph GOC:tb Any process that modulates the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits. tb 2009-09-11T10:32:17Z biological_process GO:0090069 regulation of ribosome biogenesis GO:0090069 Any process that modulates the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits. GOC:dph GOC:tb Any process that increases the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits. tb 2009-09-11T10:32:17Z biological_process GO:0090070 positive regulation of ribosome biogenesis GO:0090070 Any process that increases the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits. GOC:dph GOC:tb Any process that decreases the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits. tb 2009-09-11T10:32:17Z biological_process GO:0090071 negative regulation of ribosome biogenesis GO:0090071 Any process that decreases the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits. GOC:dph GOC:tb Any process that modulates the frequency, rate or extent of the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. tb 2009-10-23T11:21:38Z biological_process GO:0090087 regulation of peptide transport GO:0090087 Any process that modulates the frequency, rate or extent of the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:dph GOC:tb Any process that increases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix. tb 2009-11-04T10:03:25Z biological_process GO:0090091 positive regulation of extracellular matrix disassembly GO:0090091 Any process that increases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix. GOC:dph GOC:tb The process in which the population of cells that make up a tissue undergo directed movement. tb 2009-12-07T03:13:55Z biological_process GO:0090130 tissue migration GO:0090130 The process in which the population of cells that make up a tissue undergo directed movement. GOC:ascb_2009 GOC:dph GOC:tb The process in which the population of cells that make up an epithelium undergo directed movement. tb 2009-12-07T03:19:34Z biological_process GO:0090132 epithelium migration GO:0090132 The process in which the population of cells that make up an epithelium undergo directed movement. GOC:ascb_2009 GOC:dph GOC:tb The directed movement of a protein to a specific location in a membrane. tb 2009-12-08T03:18:51Z establishment of protein localisation in membrane establishment of protein localization in membrane biological_process GO:0090150 establishment of protein localization to membrane GO:0090150 The directed movement of a protein to a specific location in a membrane. GOC:ascb_2009 GOC:dph GOC:tb establishment of protein localisation in membrane GOC:mah The specification and formation of anisotropic intracellular organization of an epithelial cell. tb 2009-12-08T08:58:27Z biological_process GO:0090162 establishment of epithelial cell polarity GO:0090162 The specification and formation of anisotropic intracellular organization of an epithelial cell. GOC:ascb_2009 GOC:dph GOC:tb A cellular process that results in the breakdown of a Golgi apparatus that contributes to Golgi inheritance. tb 2009-12-08T09:15:11Z Golgi apparatus disassembly biological_process GO:0090166 Golgi disassembly GO:0090166 A cellular process that results in the breakdown of a Golgi apparatus that contributes to Golgi inheritance. GOC:ascb_2009 GOC:dph GOC:tb The reformation of the Golgi following its breakdown and partitioning contributing to Golgi inheritance. tb 2009-12-08T09:15:11Z Golgi apparatus reassembly biological_process GO:0090168 Golgi reassembly GO:0090168 The reformation of the Golgi following its breakdown and partitioning contributing to Golgi inheritance. GOC:ascb_2009 GOC:dph GOC:tb Any process that modulates the rate, frequency or extent of Golgi inheritance. Golgi inheritance is the partitioning of Golgi apparatus between daughter cells at cell division. tb 2009-12-11T10:21:59Z biological_process GO:0090170 regulation of Golgi inheritance GO:0090170 Any process that modulates the rate, frequency or extent of Golgi inheritance. Golgi inheritance is the partitioning of Golgi apparatus between daughter cells at cell division. GOC:ascb_2009 GOC:dph GOC:tb The process in which the structures of a chondrocyte are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a chondrocyte. tb 2009-12-11T10:36:02Z biological_process GO:0090171 chondrocyte morphogenesis GO:0090171 The process in which the structures of a chondrocyte are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a chondrocyte. GOC:ascb_2009 GOC:dph GOC:tb The joining of two lipid bilayers to form a single organelle membrane. tb 2009-12-11T11:44:58Z biological_process GO:0090174 organelle membrane fusion GO:0090174 The joining of two lipid bilayers to form a single organelle membrane. GOC:ascb_2009 GOC:dph GOC:tb Any process that modulates the frequency, rate or extent of a muscle system process, a multicellular organismal process carried out by any of the organs or tissues in a muscle system. tb 2010-02-03T11:48:13Z biological_process GO:0090257 regulation of muscle system process GO:0090257 Any process that modulates the frequency, rate or extent of a muscle system process, a multicellular organismal process carried out by any of the organs or tissues in a muscle system. GOC:dph GOC:tb Any process that modulates the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas. tb 2010-02-05T02:54:14Z biological_process GO:0090273 regulation of somatostatin secretion GO:0090273 Any process that modulates the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas. GOC:BHF Any process that increases the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas. tb 2010-02-05T02:54:14Z biological_process GO:0090274 positive regulation of somatostatin secretion GO:0090274 Any process that increases the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas. GOC:BHF Any process that decreases the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas. tb 2010-02-05T02:54:14Z biological_process GO:0090275 negative regulation of somatostatin secretion GO:0090275 Any process that decreases the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas. GOC:BHF Any process that modulates the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules. tb 2010-02-05T02:56:39Z biological_process GO:0090276 regulation of peptide hormone secretion GO:0090276 Any process that modulates the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules. GOC:tb Any process that increases the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules. tb 2010-02-05T02:56:39Z biological_process GO:0090277 positive regulation of peptide hormone secretion GO:0090277 Any process that increases the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules. GOC:tb Any process that decreases the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules. tb 2010-02-05T02:56:39Z biological_process GO:0090278 negative regulation of peptide hormone secretion GO:0090278 Any process that decreases the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules. GOC:tb Any process that modulates the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds. tb 2010-03-12T04:08:26Z biological_process GO:0090299 regulation of neural crest formation GO:0090299 Any process that modulates the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds. GOC:tb Any process that increases the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds. tb 2010-03-12T04:08:26Z biological_process GO:0090300 positive regulation of neural crest formation GO:0090300 Any process that increases the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds. GOC:tb Any process that decreases the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds. tb 2010-03-12T04:08:26Z biological_process GO:0090301 negative regulation of neural crest formation GO:0090301 Any process that decreases the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds. GOC:tb Any cellular metabolic process involving nucleic acids. tb 2010-04-07T10:18:47Z biological_process GO:0090304 This term should not be used for direct annotation. It should be possible to make a more specific annotation to one of the children of this term. nucleic acid metabolic process GO:0090304 Any cellular metabolic process involving nucleic acids. GOC:dph GOC:tb Any process that activates or increases the frequency, rate or extent of the directed movement of proteins within cells. tb 2010-04-16T03:45:07Z biological_process GO:0090316 positive regulation of intracellular protein transport GO:0090316 Any process that activates or increases the frequency, rate or extent of the directed movement of proteins within cells. GOC:tb Any process that decreases the frequency, rate or extent of the directed movement of proteins within cells. tb 2010-04-16T03:45:07Z biological_process GO:0090317 negative regulation of intracellular protein transport GO:0090317 Any process that decreases the frequency, rate or extent of the directed movement of proteins within cells. GOC:tb The epithelial cell differentiation process in which a relatively unspecialized cell acquires specialized features of an acinar cell, a secretory cell that is grouped together with other cells of the same type to form grape-shaped clusters known as acini. tb 2012-05-04T09:24:48Z biological_process GO:0090425 acinar cell differentiation GO:0090425 The epithelial cell differentiation process in which a relatively unspecialized cell acquires specialized features of an acinar cell, a secretory cell that is grouped together with other cells of the same type to form grape-shaped clusters known as acini. GOC:dph GOC:tb A process in which a protein is transported to, or maintained at, a location within a nuclear envelope. tb 2012-07-30T01:50:41Z protein localization in nuclear envelope biological_process GO:0090435 protein localization to nuclear envelope GO:0090435 A process in which a protein is transported to, or maintained at, a location within a nuclear envelope. GOC:tb The directed movement of catecholamine into a cell. tb 2012-10-17T11:06:17Z biological_process GO:0090493 catecholamine uptake GO:0090493 The directed movement of catecholamine into a cell. GOC:dph GOC:tb The orderly movement of a mesenchymal cell from one site to another, often during the development of a multicellular organism. tb 2012-10-17T12:08:17Z biological_process GO:0090497 mesenchymal cell migration GO:0090497 The orderly movement of a mesenchymal cell from one site to another, often during the development of a multicellular organism. GOC:dph GOC:tb Morphogenesis of a sensory organ. A sensory organ is defined as a tissue or set of tissues that work together to receive and transmit signals from external or internal stimuli. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. tb 2014-08-22T13:23:20Z biological_process GO:0090596 sensory organ morphogenesis GO:0090596 Morphogenesis of a sensory organ. A sensory organ is defined as a tissue or set of tissues that work together to receive and transmit signals from external or internal stimuli. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. GOC:kmv ISBN:978-0199210893 A macromolecular localization process in which RNA is transported to and maintained in a location within the nucleus. tb 2016-07-19T17:00:49Z RNA localisation to nucleus biological_process GO:0090685 RNA localization to nucleus GO:0090685 A macromolecular localization process in which RNA is transported to and maintained in a location within the nucleus. GOC:mah PMID:26305931 RNA localisation to nucleus GOC:mah Any membrane that is part of a pigment granule. tb 2017-05-16T22:33:39Z cellular_component GO:0090741 pigment granule membrane GO:0090741 Any membrane that is part of a pigment granule. PMID:11294610 All of the contents of a cilium, excluding the plasma membrane surrounding the cilium. pr 2011-03-23T01:52:31Z cilium plasm microtubule-based flagellar matrix microtubule-based flagellum matrix cellular_component cilial cytoplasm ciliary cytoplasm cilium cytoplasm microtubule-based flagellar cytoplasm microtubule-based flagellum cytoplasm GO:0097014 Note that we deem cilium and microtubule-based flagellum to be equivalent. Also, researchers consider the composition of both the plasm and the membrane of the cilium to be detectably different from that in the non-ciliary cytosol and plasma membrane (e.g. in terms of calcium ion concentration, membrane lipid composition, and more). For this reason, the term "ciliary plasm" is not linked to "cytoplasm". ciliary plasm GO:0097014 All of the contents of a cilium, excluding the plasma membrane surrounding the cilium. GOC:BHF GOC:cilia GOC:dos PMID:17895364 Any apoptotic process in a motor neuron, an efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement. pr 2011-05-04T02:21:43Z motoneuron apoptosis motor neuron apoptosis biological_process GO:0097049 motor neuron apoptotic process GO:0097049 Any apoptotic process in a motor neuron, an efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement. CL:0000100 GOC:BHF GOC:mtg_apoptosis PMID:14523086 A specialized area of membrane on either the presynaptic or the postsynaptic side of a synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell. pr 2011-06-07T11:22:09Z cellular_component GO:0097060 synaptic membrane GO:0097060 A specialized area of membrane on either the presynaptic or the postsynaptic side of a synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell. GOC:BHF PMID:20410104 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a dendritic spine. A dendritic spine is a specialized protrusion from a neuronal dendrite and is involved in synaptic transmission. pr 2011-06-07T11:26:53Z dendritic spine organisation biological_process GO:0097061 dendritic spine organization GO:0097061 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a dendritic spine. A dendritic spine is a specialized protrusion from a neuronal dendrite and is involved in synaptic transmission. GOC:BHF PMID:20410104 The process aimed at the progression of a vascular smooth muscle cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels. pr 2011-06-20T04:03:08Z vascular smooth muscle cell development biological_process GO:0097084 vascular associated smooth muscle cell development GO:0097084 The process aimed at the progression of a vascular smooth muscle cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels. GOC:BHF The process in which any suture between cranial and/or facial bones is generated and organized. pr 2011-07-05T02:51:54Z biological_process GO:0097094 craniofacial suture morphogenesis GO:0097094 The process in which any suture between cranial and/or facial bones is generated and organized. GOC:pr GOC:sl Wikipedia:Cranial_sutures Wikipedia:Head_and_neck_anatomy#Musculoskeletal_system The process in which any suture between facial bones is generated and organized. pr 2011-07-05T03:06:27Z biological_process GO:0097096 facial suture morphogenesis GO:0097096 The process in which any suture between facial bones is generated and organized. GOC:pr GOC:sl Wikipedia:Cranial_sutures Wikipedia:Head_and_neck_anatomy#Musculoskeletal_system Any apoptotic process in a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types. pr 2011-09-06T02:31:59Z mesenchymal cell apoptosis biological_process GO:0097152 mesenchymal cell apoptotic process GO:0097152 Any apoptotic process in a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types. CL:0000134 GOC:mtg_apoptosis GOC:yaf PMID:18231833 The chemical reactions and pathways involving the ammonium ion. pr 2011-09-28T04:21:30Z ammonium ion metabolism biological_process ammonium metabolic process GO:0097164 ammonium ion metabolic process GO:0097164 The chemical reactions and pathways involving the ammonium ion. GOC:dhl GOC:tb PMID:14671018 The series of molecular signals which triggers the apoptotic death of a cell. The pathway starts with reception of a signal, and ends when the execution phase of apoptosis is triggered. pr 2011-11-23T09:30:23Z GO:0008624 Reactome:R-HSA-193681 Reactome:R-HSA-204998 Reactome:R-HSA-75157 apoptotic signalling pathway induction of apoptosis by extracellular signals biological_process GO:0097190 This term can be used to annotate gene products involved in apoptotic events happening downstream of the cross-talk point between the extrinsic and intrinsic apoptotic pathways. The cross-talk starts when caspase-8 cleaves Bid and truncated Bid interacts with mitochondria. From this point on it is not possible to distinguish between extrinsic and intrinsic pathways. apoptotic signaling pathway GO:0097190 The series of molecular signals which triggers the apoptotic death of a cell. The pathway starts with reception of a signal, and ends when the execution phase of apoptosis is triggered. GOC:mtg_apoptosis Reactome:R-HSA-193681 Ceramide signalling Reactome:R-HSA-204998 Cell death signalling via NRAGE, NRIF and NADE Reactome:R-HSA-75157 FasL/ CD95L signaling apoptotic signalling pathway GOC:mah A stage of the apoptotic process that starts with the controlled breakdown of the cell through the action of effector caspases or other effector molecules (e.g. cathepsins, calpains etc.). Key steps of the execution phase are rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died. pr 2011-11-23T09:45:24Z Reactome:R-HSA-75153 execution phase of apoptotic process apoptosis biological_process GO:0097194 execution phase of apoptosis GO:0097194 A stage of the apoptotic process that starts with the controlled breakdown of the cell through the action of effector caspases or other effector molecules (e.g. cathepsins, calpains etc.). Key steps of the execution phase are rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died. GOC:mtg_apoptosis PMID:21760595 Reactome:R-HSA-75153 Apoptotic execution phase Any apoptotic process in an oligodendrocyte. Oligodendrocytes belong to a class of large neuroglial (macroglial) cells in the central nervous system, where they form the insulating myelin sheath of axons. pr 2012-03-05T10:51:15Z oligodendrocyte apoptosis biological_process GO:0097252 oligodendrocyte apoptotic process GO:0097252 Any apoptotic process in an oligodendrocyte. Oligodendrocytes belong to a class of large neuroglial (macroglial) cells in the central nervous system, where they form the insulating myelin sheath of axons. CL:0000128 GOC:mtg_apoptosis GOC:yaf PMID:16723520 Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into heterochromatin. pr 2012-07-03T03:19:07Z protein localisation to heterochromatin biological_process GO:0097355 protein localization to heterochromatin GO:0097355 Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into heterochromatin. GOC:mah protein localisation to heterochromatin GOC:mah A prolongation or process extending from a glial cell. pr 2012-10-22T13:55:54Z cellular_component glial process glial projection GO:0097386 glial cell projection GO:0097386 A prolongation or process extending from a glial cell. GOC:mc The orderly movement of a neuroblast from one site to another, often during the development of a multicellular organism or multicellular structure. A neuroblast is any cell that will divide and give rise to a neuron. pr 2012-10-29T08:24:37Z biological_process GO:0097402 neuroblast migration GO:0097402 The orderly movement of a neuroblast from one site to another, often during the development of a multicellular organism or multicellular structure. A neuroblast is any cell that will divide and give rise to a neuron. CL:0000031 GOC:jc PMID:15543145 An arrangement of closely apposed microtubules running parallel to each other. pr 2012-11-07T15:01:27Z NIF_Subcellular:sao1872343973 microtubule fascicle cellular_component GO:0097427 microtubule bundle GO:0097427 An arrangement of closely apposed microtubules running parallel to each other. NIF_Subcellular:sao1872343973 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a supramolecular fiber, a polymer consisting of an indefinite number of protein or protein complex subunits that have polymerised to form a fiber-shaped structure. pr 2012-11-27T15:46:25Z GO:0043206 extracellular fibril organisation extracellular fibril organization extracellular fibril organization and biogenesis biological_process fibril organisation fibril organization GO:0097435 supramolecular fiber organization GO:0097435 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a supramolecular fiber, a polymer consisting of an indefinite number of protein or protein complex subunits that have polymerised to form a fiber-shaped structure. GOC:pr extracellular fibril organization and biogenesis GOC:mah The entire complement of dendrites for a neuron, consisting of each primary dendrite and all its branches. pr 2012-12-17T12:31:49Z NIF_Subcellular:sao172297168 cellular_component GO:0097447 dendritic tree GO:0097447 The entire complement of dendrites for a neuron, consisting of each primary dendrite and all its branches. GOC:aruk GOC:bc NIF_Subcellular:sao172297168 Any apoptotic process in a retinal rod cell, one of the two photoreceptor cell types of the vertebrate retina. pr 2013-03-21T09:44:45Z rod photoreceptor apoptotic process biological_process GO:0097473 retinal rod cell apoptotic process GO:0097473 Any apoptotic process in a retinal rod cell, one of the two photoreceptor cell types of the vertebrate retina. CL:0000604 GOC:jc PMID:17202487 Any apoptotic process in a retinal cone cell, one of the two photoreceptor cell types of the vertebrate retina. pr 2013-03-21T09:46:22Z cone photoreceptor apoptotic process biological_process GO:0097474 retinal cone cell apoptotic process GO:0097474 Any apoptotic process in a retinal cone cell, one of the two photoreceptor cell types of the vertebrate retina. CL:0000573 GOC:jc The orderly movement of a motor neuron from one site to another. A motor neuron is an efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement. pr 2013-04-23T13:00:46Z biological_process GO:0097475 motor neuron migration GO:0097475 The orderly movement of a motor neuron from one site to another. A motor neuron is an efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement. CL:0000100 GOC:yaf PMID:20711475 The orderly movement of a spinal cord motor neuron from one site to another. A spinal cord motor neuron is a motor neuron that passes from the spinal cord toward or to a muscle and conducts an impulse that causes movement. pr 2013-04-23T13:03:46Z biological_process GO:0097476 spinal cord motor neuron migration GO:0097476 The orderly movement of a spinal cord motor neuron from one site to another. A spinal cord motor neuron is a motor neuron that passes from the spinal cord toward or to a muscle and conducts an impulse that causes movement. CL:0011001 GOC:yaf PMID:20711475 A cardiac myofibril is a myofibril specific to cardiac muscle cells. pr 2013-10-16T13:04:58Z cellular_component GO:0097512 cardiac myofibril GO:0097512 A cardiac myofibril is a myofibril specific to cardiac muscle cells. GOC:cjm GOC:devbiol The movement of a myeloid leukocyte within or between different tissues and organs of the body. pr 2013-11-11T13:59:43Z biological_process GO:0097529 myeloid leukocyte migration GO:0097529 The movement of a myeloid leukocyte within or between different tissues and organs of the body. GOC:cvs PMID:22342843 PMID:24157461 The orderly movement of a lymphoid lineage cell from one site to another. A lymphoid lineage cell, also called a lymphoid lineage restricted progenitor cell, is a progenitor cell restricted to the lymphoid lineage. pr 2013-11-28T10:47:15Z lymphoid lineage restricted progenitor cell migration biological_process GO:0097534 lymphoid lineage cell migration GO:0097534 The orderly movement of a lymphoid lineage cell from one site to another. A lymphoid lineage cell, also called a lymphoid lineage restricted progenitor cell, is a progenitor cell restricted to the lymphoid lineage. GOC:pr PMID:22342843 Merging of two or more vacuoles, or of vacuoles and vesicles within a cell to form a single larger vacuole. pr 2014-02-28T09:49:31Z biological_process GO:0097576 vacuole fusion GO:0097576 Merging of two or more vacuoles, or of vacuoles and vesicles within a cell to form a single larger vacuole. GOC:pr GOC:vw Wikipedia:Vacuole Any vesicle that is part of the intracellular region. pr 2016-03-29T17:39:45Z cellular_component GO:0097708 intracellular vesicle GO:0097708 Any vesicle that is part of the intracellular region. GOC:vesicles The docking of a cytosolic centriole/basal body to the plasma membrane via the ciliary transition fibers. In some species this may happen via an intermediate step, by first docking to the ciliary vesicle via the ciliary transition fibers. The basal body-ciliary vesicle then relocates to the plasma membrane, followed by the ciliary vesicle fusing with the plasma membrane, effectively attaching the basal body to the plasma membrane. pr 2016-08-05T16:12:33Z Reactome:R-HSA-5620912 ciliary basal body docking biological_process anchoring of the basal body to the plasma membrane GO:0097711 Basal bodies in jawed vertebrates appear to first attach to a ciliary vesicle. It is unclear how specific this is to jawed vertebrates or if other organisms also employ this sequence. Some species like Giardia intestinalis do not relocate their basal bodies to the plasma membrane, but have their axonemes extend through the cytosol to then protrude out of the cell to form flagella. ciliary basal body-plasma membrane docking GO:0097711 The docking of a cytosolic centriole/basal body to the plasma membrane via the ciliary transition fibers. In some species this may happen via an intermediate step, by first docking to the ciliary vesicle via the ciliary transition fibers. The basal body-ciliary vesicle then relocates to the plasma membrane, followed by the ciliary vesicle fusing with the plasma membrane, effectively attaching the basal body to the plasma membrane. GOC:cilia PMID:13978319 PMID:23348840 PMID:23530209 PMID:25686250 PMID:26981235 Reactome:R-HSA-5620912 Anchoring of the basal body to the plasma membrane The process in which vesicles formed at the trans-Golgi network are directed to the plasma membrane surrounding the base of the cilium, including the ciliary pocket, mediated by molecules at the vesicle membrane and target membrane surfaces. pr 2016-08-05T16:16:28Z biological_process GO:0097712 vesicle targeting, trans-Golgi to periciliary membrane compartment GO:0097712 The process in which vesicles formed at the trans-Golgi network are directed to the plasma membrane surrounding the base of the cilium, including the ciliary pocket, mediated by molecules at the vesicle membrane and target membrane surfaces. GOC:cilia PMID:20106869 PMID:23351793 PMID:24814148 PMID:26485645 The assembly and secretion of an extracellular exosome, a membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. pr 2016-10-03T14:35:25Z exosome assembly or secretion exosome biogenesis exosome production biological_process ILV assembly intraluminal vesicle assembly GO:0097734 extracellular exosome biogenesis GO:0097734 The assembly and secretion of an extracellular exosome, a membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. GOC:PARL GOC:bf PMID:19442504 PMID:25392495 Centriole assembly in which a centriole arises de novo, rather than by replication from an existing centriole. This process may occur via different mechanisms. Examples include the deuterosome pathway in multicilated epithelial animal cells and formation of centrioles during parthenogenesis in some insects. pr 2016-10-19T15:13:50Z biological_process acentriolar basal body biogenesis de novo basal body amplification de novo basal body assembly de novo basal body biogenesis de novo basal body generation de novo centriole amplification de novo ciliary basal body assembly multiciliation multiciliogenesis GO:0097742 de novo centriole assembly GO:0097742 Centriole assembly in which a centriole arises de novo, rather than by replication from an existing centriole. This process may occur via different mechanisms. Examples include the deuterosome pathway in multicilated epithelial animal cells and formation of centrioles during parthenogenesis in some insects. GOC:cilia PMID:25047614 PMID:25291643 A neuromuscular junction in which the target muscle cell is a myotube. dos 2013-10-14T12:05:12Z cellular_component GO:0098523 In vertebrates, the term 'neuromuscular junction' is limited to synapses targeting the myotubes of skeletal muscle (AKA skeletal muscle fibers). Neuromuscular junctions targeting other muscle cell types exist in invertebrates such as the mononucleate somatic muscles of nematodes. neuromuscular junction of myotube GO:0098523 A neuromuscular junction in which the target muscle cell is a myotube. GOC:dos The process in which a relatively unspecialized cell acquires specialized features of a skeletal muscle fiber cell. Skeletal muscle fiber differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual skeletal muscle fibers fuse to form bigger myotubes and start to contract. dos 2013-10-15T14:00:34Z biological_process GO:0098528 skeletal muscle fiber differentiation GO:0098528 The process in which a relatively unspecialized cell acquires specialized features of a skeletal muscle fiber cell. Skeletal muscle fiber differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual skeletal muscle fibers fuse to form bigger myotubes and start to contract. GOC:dos A cellular process that results in the assembly of one or more centrioles. dos 2013-10-22T15:55:22Z biological_process GO:0098534 centriole assembly GO:0098534 A cellular process that results in the assembly of one or more centrioles. GOC:dos PMID:24075808 Centriole assembly in which a centriole arises de novo by a process involving an electron-dense structure known as a deuterosome, rather than by duplication of an existing centriole, and occurring as part of multi-ciliated epithelial cell differentiation. dos 2013-10-22T16:03:13Z de novo centriole assembly de novo centriole assembly via deuterosome biological_process centriole amplification deuterosomal basal body biogenesis deuterosome pathway deuterosome-mediated centriole biogenesis multiciliation multiciliogenesis GO:0098535 In most eukaryotic cells, 'centriole' (GO:0005814) and 'ciliary basal body' (GO:0036064) represent a common entity that cycles through its function in cell division, then ciliogenesis, then cell division again. However, these structures are modified extensively as they transition into each other, and may contain different proteins, specific to each component. de novo centriole assembly involved in multi-ciliated epithelial cell differentiation GO:0098535 Centriole assembly in which a centriole arises de novo by a process involving an electron-dense structure known as a deuterosome, rather than by duplication of an existing centriole, and occurring as part of multi-ciliated epithelial cell differentiation. GOC:cilia GOC:dos PMID:24075808 PMID:5111878 PMID:5661997 centriole amplification PMID:24075808 deuterosome pathway PMID:25047614 deuterosome-mediated centriole biogenesis PMID:24075808 A spherical, electron dense, cytoplasmic structure that is involved in de novo assembly of centrioles. dos 2013-10-22T16:21:19Z cellular_component GO:0098536 deuterosome GO:0098536 A spherical, electron dense, cytoplasmic structure that is involved in de novo assembly of centrioles. GOC:cilia GOC:dos PMID:24075808 PMID:25047614 PMID:5661997 Reactions triggered in response to the presence of another organism that act to protect the cell or organism from damage caused by that organism. dos 2013-11-11T12:59:11Z GO:0009814 defence response incompatible interaction defence response to pathogen, incompatible interaction defense response, incompatible interaction resistance response to pathogen biological_process GO:0098542 defense response to other organism GO:0098542 Reactions triggered in response to the presence of another organism that act to protect the cell or organism from damage caused by that organism. GOC:dos Any process in which a protein complex is maintained in a location and prevented from moving elsewhere. These include sequestration, stabilization to prevent transport elsewhere and the active retrieval of protein complexes that move away. dos 2013-11-15T18:20:16Z biological_process GO:0098544 maintenance of protein complex location GO:0098544 Any process in which a protein complex is maintained in a location and prevented from moving elsewhere. These include sequestration, stabilization to prevent transport elsewhere and the active retrieval of protein complexes that move away. GOC:dos Any process in which a protein complex is maintained in a specific location within the cytoplasm and is prevented from moving elsewhere. dos 2013-11-15T20:49:15Z biological_process GO:0098545 maintenance of protein complex location in cytoplasm GO:0098545 Any process in which a protein complex is maintained in a specific location within the cytoplasm and is prevented from moving elsewhere. GOC:dos The lipid bilayer that forms the outer-most layer of an organelle. dos 2014-02-26T13:41:31Z cellular_component GO:0098588 Examples include the outer membranes of double membrane bound organelles such as mitochondria as well as the bounding membranes of single-membrane bound organelles such as lysosomes. bounding membrane of organelle GO:0098588 The lipid bilayer that forms the outer-most layer of an organelle. GOC:dos A membrane that is a (regional) part of the plasma membrane. dos 2014-03-06T11:55:32Z region of plasma membrane cellular_component GO:0098590 Note that this term should not be used for direct manual annotation as it should always be possible to choose a more specific subclass. plasma membrane region GO:0098590 A membrane that is a (regional) part of the plasma membrane. GOC:dos A collagen trimer that forms networks. cellular_component GO:0098642 network-forming collagen trimer GO:0098642 A collagen trimer that forms networks. PMID:21421911 A supramolecular assembly of fibrillar collagen complexes in the form of a long fiber (fibril) with transverse striations (bands). cellular_component GO:0098643 banded collagen fibril GO:0098643 A supramolecular assembly of fibrillar collagen complexes in the form of a long fiber (fibril) with transverse striations (bands). GOC:dos PMID:21421911 A complex of collagen trimers such as a fibril or collagen network. Supramolecular aggregate of collagen Supramolecular collagen assembly cellular_component GO:0098644 complex of collagen trimers GO:0098644 A complex of collagen trimers such as a fibril or collagen network. GOC:dos Supramolecular aggregate of collagen PMID:19693541 Supramolecular collagen assembly PMID:21421911 A supramolecular complex that consists of collagen triple helices associated to form a network. cellular_component GO:0098645 collagen network GO:0098645 A supramolecular complex that consists of collagen triple helices associated to form a network. GOC:dos PMID:21421911 The directed movement of some substance from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis. uptake biological_process GO:0098657 import into cell GO:0098657 The directed movement of some substance from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis. GOC:dos The directed movement of inorganic anions from outside of a cell, across the plasma membrane and into the cytosol. inorganic anion import into cell biological_process GO:0098658 inorganic anion import across plasma membrane GO:0098658 The directed movement of inorganic anions from outside of a cell, across the plasma membrane and into the cytosol. GOC:dos The directed movement of inorganic cations from outside of a cell, across the plasma membrane and into the cytosol. inorganic cation import into cell biological_process GO:0098659 inorganic cation import across plasma membrane GO:0098659 The directed movement of inorganic cations from outside of a cell, across the plasma membrane and into the cytosol. GOC:dos The process in which an inorganic ion is transported across a membrane. inorganic ion membrane transport transmembrane inorganic ion transport biological_process GO:0098660 Note that this term is not intended for use in annotating lateral movement within membranes. inorganic ion transmembrane transport GO:0098660 The process in which an inorganic ion is transported across a membrane. GOC:mah transmembrane inorganic ion transport GOC:dph GOC:tb The process in which an inorganic anion is transported across a membrane. inorganic anion membrane transport transmembrane inorganic anion transport biological_process GO:0098661 Note that this term is not intended for use in annotating lateral movement within membranes. inorganic anion transmembrane transport GO:0098661 The process in which an inorganic anion is transported across a membrane. GOC:mah transmembrane inorganic anion transport GOC:dph GOC:tb A process in which an inorganic cation is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. GO:0015672 GO:0072511 inorganic cation membrane transport transmembrane inorganic cation transport divalent inorganic cation transport monovalent inorganic cation transport biological_process GO:0098662 Note that this term is not intended for use in annotating lateral movement within membranes. inorganic cation transmembrane transport GO:0098662 A process in which an inorganic cation is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. GOC:mah transmembrane inorganic cation transport GOC:dph GOC:tb The directed movement of a carbohydrate from outside of a cell, across the plasma membrane and into the cytosol. pr 2012-05-31T02:45:02Z GO:0097319 carbohydrate import into cell biological_process GO:0098704 carbohydrate import across plasma membrane GO:0098704 The directed movement of a carbohydrate from outside of a cell, across the plasma membrane and into the cytosol. GOC:dos Division of a stem cell during which it retains its identity and buds off a daughter cell with a new identity. biological_process GO:0098722 asymmetric stem cell division GO:0098722 Division of a stem cell during which it retains its identity and buds off a daughter cell with a new identity. GOC:dos PMID:18513950 A myofibril of a skeletal muscle fiber. cellular_component GO:0098723 skeletal muscle myofibril GO:0098723 A myofibril of a skeletal muscle fiber. GOC:dos The self-renewing division of a germline stem cell, to produce a daughter stem cell and a daughter germ cell which will divide to form one or more gametes. biological_process GO:0098728 germline stem cell asymmetric division GO:0098728 The self-renewing division of a germline stem cell, to produce a daughter stem cell and a daughter germ cell which will divide to form one or more gametes. GOC:dos The directed movement of some substance from outside of a cell, across the plasma membrane and into the cytosol. uptake biological_process GO:0098739 import across plasma membrane GO:0098739 The directed movement of some substance from outside of a cell, across the plasma membrane and into the cytosol. GOC:dos The process whose specific outcome is the progression of a bone cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. biological_process GO:0098751 Not to be used for manual annotation. Please choose a more specific cell development term or if not possible, bone or bone tissue development. bone cell development GO:0098751 The process whose specific outcome is the progression of a bone cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. GOC:dos The process whose specific outcome is the progression of the skin epidermis over time, from its formation to the mature structure. biological_process GO:0098773 skin epidermis development GO:0098773 The process whose specific outcome is the progression of the skin epidermis over time, from its formation to the mature structure. GOC:dos The part of a synapse that is part of the presynaptic cell. presynaptic terminal cellular_component GO:0098793 presynapse GO:0098793 The part of a synapse that is part of the presynaptic cell. GOC:dos The part of a synapse that is part of the post-synaptic cell. cellular_component GO:0098794 postsynapse GO:0098794 The part of a synapse that is part of the post-synaptic cell. GOC:dos Any protein complex that is part of a membrane. cellular_component GO:0098796 membrane protein complex GO:0098796 Any protein complex that is part of a membrane. GOC:dos Any protein complex that is part of the plasma membrane. cellular_component GO:0098797 plasma membrane protein complex GO:0098797 Any protein complex that is part of the plasma membrane. GOC:dos The process in which genetic material, in the form of nuclear chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets. Nuclear chromosome segregation begins with the condensation of chromosomes, includes chromosome separation, and ends when chromosomes have completed movement to the spindle poles. biological_process GO:0098813 nuclear chromosome segregation GO:0098813 The process in which genetic material, in the form of nuclear chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets. Nuclear chromosome segregation begins with the condensation of chromosomes, includes chromosome separation, and ends when chromosomes have completed movement to the spindle poles. GOC:dos The portion of the cytoskeleton that lies within a dendritic spine. The actin component of this cytoskeleton is involved in spine head remodeling in response to postsynaptic signaling. cellular_component GO:0098836 cytoskeleton of dendritic spine GO:0098836 The portion of the cytoskeleton that lies within a dendritic spine. The actin component of this cytoskeleton is involved in spine head remodeling in response to postsynaptic signaling. PMID:24854120 The directed movement of a protein along a microtubule, mediated by motor proteins. microtubule-based protein transport biological_process GO:0098840 protein transport along microtubule GO:0098840 The directed movement of a protein along a microtubule, mediated by motor proteins. PMID:25987607 The increase in size or mass of an intramembranous bone that contributes to the shaping of the bone. biological_process GO:0098867 intramembranous bone growth GO:0098867 The increase in size or mass of an intramembranous bone that contributes to the shaping of the bone. PMID:26399686 The increase in size or mass of a bone that contributes to the shaping of that bone. biological_process GO:0098868 bone growth GO:0098868 The increase in size or mass of a bone that contributes to the shaping of that bone. GOC:dos The actin cytoskeleton that is part of a postsynapse. cellular_component GO:0098871 postsynaptic actin cytoskeleton GO:0098871 The actin cytoskeleton that is part of a postsynapse. GOC:dos The directed movement of substances to the plasma membrane in transport vesicles that fuse with the plasma membrane by exocytosis. biological_process GO:0098876 vesicle-mediated transport to the plasma membrane GO:0098876 The directed movement of substances to the plasma membrane in transport vesicles that fuse with the plasma membrane by exocytosis. GOC:dos A cellular process that results in the controlled breakdown of synapse. After it starts the process is continuous until the synapse has disappeared. synapse clearance synapse elimination synapse removal biological_process GO:0098883 synapse pruning GO:0098883 A cellular process that results in the controlled breakdown of synapse. After it starts the process is continuous until the synapse has disappeared. GOC:dos PMID:12062020 PMID:18083105 PMID:22632716 PMID:29844190 synapse clearance GOC:aruk GOC:bc PMID:22632716 synapse elimination GOC:aruk GOC:bc PMID:18083105 PMID:29844190 synapse removal GOC:aruk GOC:bc PMID:22632716 Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. biological_process GO:0098900 The ion channels through which current flows during an action potential should be annotated to the process 'action potential'. Gene products involved in modulating the characteristics of an action potential via changing the expression levels or the activity of these channels (e.g. modulating their kinetics or voltage sensitivity) should be annotated to this regulation term. regulation of action potential GO:0098900 Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. GOC:dos GOC:dph GOC:go_curators GOC:tb ISBN:978-0-07-139011-8 Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a cardiac muscle cell. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. biological_process GO:0098901 regulation of cardiac muscle cell action potential GO:0098901 Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a cardiac muscle cell. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. GOC:dos GOC:mtg_cardiac_conduct_nov11 Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in an atrioventricular node myocyte. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. tb 2011-11-10T08:58:56Z regulation of AV node cardiac muscle cell action potential regulation of atrioventricular node cardiac muscle cell action potential biological_process GO:0098904 regulation of AV node cell action potential GO:0098904 Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in an atrioventricular node myocyte. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. GOC:BHF GOC:mtg_cardiac_conduct_nov11 Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a Purkinje myocyte. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. tb 2011-11-10T08:58:56Z biological_process GO:0098906 regulation of Purkinje myocyte action potential GO:0098906 Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a Purkinje myocyte. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. GOC:BHF GOC:mtg_cardiac_conduct_nov11 Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in an SA node cardiac myocyte. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. tb 2011-11-10T08:50:15Z regulation of SA node cardiac muscle cell action potential regulation of SAN cardiac muscle cell action potential regulation of sinoatrial node cardiac muscle cell action potential regulation of sinus node cardiac muscle cell action potential biological_process GO:0098907 regulation of SA node cell action potential GO:0098907 Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in an SA node cardiac myocyte. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. GOC:BHF GOC:mtg_cardiac_conduct_nov11 Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a neuron. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. biological_process generation of action potential GO:0098908 regulation of neuronal action potential GO:0098908 Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a neuron. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. GOC:dph GOC:isa_complete GOC:tb generation of action potential GOC:dph GOC:tb Cell-cell signaling from pre to post-synapse, across the synaptic cleft. biological_process GO:0098916 anterograde trans-synaptic signaling GO:0098916 Cell-cell signaling from pre to post-synapse, across the synaptic cleft. GOC:dos Cell-cell signaling from post to pre-synapse, across the synaptic cleft. biological_process GO:0098917 retrograde trans-synaptic signaling GO:0098917 Cell-cell signaling from post to pre-synapse, across the synaptic cleft. GOC:dos Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by a lipid ligand. biological_process GO:0098920 retrograde trans-synaptic signaling by lipid GO:0098920 Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by a lipid ligand. GOC:dos Signal transduction in which the initial step occurs in a postsynapse. biological_process GO:0098926 postsynaptic signal transduction GO:0098926 Signal transduction in which the initial step occurs in a postsynapse. GOC:dos Signal transduction in which the initial step occurs in a presynapse. biological_process GO:0098928 presynaptic signal transduction GO:0098928 Signal transduction in which the initial step occurs in a presynapse. GOC:dos The directed movement of organelles or molecules along microtubules in axons. Wikipedia:Axoplasmic_transport axon cargo transport axoplasmic transport biological_process GO:0098930 axonal transport GO:0098930 The directed movement of organelles or molecules along microtubules in axons. ISBN:0815316194 The directed movement of organelles or molecules along microtubules in a dendrite from the postsynapse towards the cell body. biological_process GO:0098934 retrograde dendritic transport GO:0098934 The directed movement of organelles or molecules along microtubules in a dendrite from the postsynapse towards the cell body. GOC:dos The directed movement of organelles or molecules along microtubules in dendrites. dendrite cargo transport biological_process GO:0098935 dendritic transport GO:0098935 The directed movement of organelles or molecules along microtubules in dendrites. ISBN:0815316194 The directed movement of organelles or molecules along microtubules from the cell body toward the postsynapse in dendrites. biological_process GO:0098937 anterograde dendritic transport GO:0098937 The directed movement of organelles or molecules along microtubules from the cell body toward the postsynapse in dendrites. ISBN:0815316194 The actin cytoskeleton that is part of a dendritic spine. cellular_component GO:0098938 actin cytoskeleton of dendritic spine GO:0098938 The actin cytoskeleton that is part of a dendritic spine. GOC:dos The directed movement of a ribonucleoprotein complex along microtubules in nerve cell dendrites. dendritic transport of RNP complex biological_process GO:0098961 dendritic transport of ribonucleoprotein complex GO:0098961 The directed movement of a ribonucleoprotein complex along microtubules in nerve cell dendrites. GOC:dos A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins in the postsynaptic actin cytoskeleton. biological_process GO:0098974 postsynaptic actin cytoskeleton organization GO:0098974 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins in the postsynaptic actin cytoskeleton. GOC:dos The postsynapse of a neuromuscular junction. In vertebrate muscles this includes the motor end-plate, consisting of postjunctional folds of the sarcolemma. cellular_component GO:0098975 postsynapse of neuromuscular junction GO:0098975 The postsynapse of a neuromuscular junction. In vertebrate muscles this includes the motor end-plate, consisting of postjunctional folds of the sarcolemma. GOC:dos Wikipedia:Neuromuscular_junction&oldid=723623502 A synapse that uses acetylcholine as a neurotransmitter. cellular_component GO:0098981 cholinergic synapse GO:0098981 A synapse that uses acetylcholine as a neurotransmitter. GOC:dos A dense core vesicle (granule) that is part of a neuron. These vesicles typically contain neuropeptides. They can be found in all parts of neurons, including the soma, dendrites, axonal swellings (varicosities) and synaptic terminals. cellular_component GO:0098992 neuronal dense core vesicle GO:0098992 A dense core vesicle (granule) that is part of a neuron. These vesicles typically contain neuropeptides. They can be found in all parts of neurons, including the soma, dendrites, axonal swellings (varicosities) and synaptic terminals. GOC:dos ISBN:978-0-07-181001-2 Wikipedia:Neuropeptide&oldid=713905176 Any vesicle-mediated transport that occurs in a synapse. biological_process GO:0099003 vesicle-mediated transport in synapse GO:0099003 Any vesicle-mediated transport that occurs in a synapse. GOC:dos The lipid bilayer surrounding a neuronal dense core vesicle. cellular_component GO:0099012 neuronal dense core vesicle membrane GO:0099012 The lipid bilayer surrounding a neuronal dense core vesicle. GOC:dos A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuronal dense core vesicle. biological_process GO:0099014 neuronal dense core vesicle organization GO:0099014 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuronal dense core vesicle. GOC:dos The aggregation, arrangement and bonding together of a set of components to form a presynapse. presynapse biogenesis presynaptic terminal assembly biological_process GO:0099054 presynapse assembly GO:0099054 The aggregation, arrangement and bonding together of a set of components to form a presynapse. GOC:PARL GOC:bf GOC:dos PMID:24449494 presynapse biogenesis GOC:mah presynaptic terminal assembly PMID:24449494 The aggregation, arrangement and bonding together of a set of components to form a postsynapse. postsynapse biogenesis biological_process GO:0099068 postsynapse assembly GO:0099068 The aggregation, arrangement and bonding together of a set of components to form a postsynapse. GOC:bf GOC:dos GOCL:PARL postsynapse biogenesis GOC:mah A cellular component that consists of an indeterminate number of proteins or macromolecular complexes, organized into a regular, higher-order structure such as a polymer, sheet, network or a fiber. cellular_component GO:0099080 supramolecular complex GO:0099080 A cellular component that consists of an indeterminate number of proteins or macromolecular complexes, organized into a regular, higher-order structure such as a polymer, sheet, network or a fiber. GOC:dos A polymeric supramolecular structure. cellular_component GO:0099081 supramolecular polymer GO:0099081 A polymeric supramolecular structure. GOC:dos Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by a neuropeptide. biological_process GO:0099082 retrograde trans-synaptic signaling by neuropeptide GO:0099082 Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by a neuropeptide. GOC:PARL GOC:bf GOC:dos PMID:19448629 Modulation of synaptic transmission by cell-cell signaling across the synaptic cleft from postsynapse to presynapse, mediated by a neuropeptide. biological_process GO:0099083 Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua. retrograde trans-synaptic signaling by neuropeptide, modulating synaptic transmission GO:0099083 Modulation of synaptic transmission by cell-cell signaling across the synaptic cleft from postsynapse to presynapse, mediated by a neuropeptide. GOC:PARL GOC:bf GOC:dos PMID:19448629 The movement of a cellular component as a result of microtubule polymerization. biological_process GO:0099098 microtubule polymerization based movement GO:0099098 The movement of a cellular component as a result of microtubule polymerization. GOC:cjm ISBN:0815316194 A microtubule-based process that results in the transport of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules. biological_process GO:0099111 microtubule-based transport GO:0099111 A microtubule-based process that results in the transport of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules. GOC:cjm ISBN:0815316194 The transport of a protein driven by polymerization of a microtubule to which it is attached. biological_process GO:0099112 microtubule polymerization based protein transport GO:0099112 The transport of a protein driven by polymerization of a microtubule to which it is attached. GOC:dos GOC:vw PMID:11018050 A microtubule-based process that results in the transport of proteins. biological_process GO:0099118 microtubule-based protein transport GO:0099118 A microtubule-based process that results in the transport of proteins. GOC:vw A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins in the presynaptic actin cytoskeleton. dos 2017-06-09T18:34:19Z biological_process GO:0099140 presynaptic actin cytoskeleton organization GO:0099140 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins in the presynaptic actin cytoskeleton. GOC:dos The actin cytoskeleton that is part of a presynapse. dos 2017-06-09T18:36:19Z cellular_component GO:0099143 presynaptic actin cytoskeleton GO:0099143 The actin cytoskeleton that is part of a presynapse. GOC:dos Cell-cell signaling in which the ligand is carried between cells by an exosome. dos 2017-07-05T16:40:45Z exosome mediated biological_process GO:0099156 cell-cell signaling via exosome GO:0099156 Cell-cell signaling in which the ligand is carried between cells by an exosome. GOC:dos PMID:19837038 Transynaptic signaling in which the ligand is carried across the synapse by an exosome. dos 2017-07-05T16:49:44Z exosome mediated transynaptic signalling trans-synaptic signalling via exosome biological_process GO:0099157 trans-synaptic signaling via exosome GO:0099157 Transynaptic signaling in which the ligand is carried across the synapse by an exosome. GOC:dos PMID:19837038 Any process, acting in the postsynapse that results in modulation of chemical synaptic transmission. dos 2017-09-11T17:09:17Z biological_process GO:0099170 postsynaptic modulation of chemical synaptic transmission GO:0099170 Any process, acting in the postsynapse that results in modulation of chemical synaptic transmission. GOC:dos Any process, acting in the presynapse that results in modulation of chemical synaptic transmission. dos 2017-09-11T17:09:31Z biological_process GO:0099171 presynaptic modulation of chemical synaptic transmission GO:0099171 Any process, acting in the presynapse that results in modulation of chemical synaptic transmission. GOC:dos A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a presynapse. presynapse development presynapse organisation biological_process presynapse morphogenesis presynapse organization and biogenesis GO:0099172 presynapse organization GO:0099172 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a presynapse. GOC:dos presynapse morphogenesis GOC:BHF presynapse organization and biogenesis GOC:mah A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a postsynapse. postsynapse development postsynapse organisation biological_process postsynapse morphogenesis postsynapse organization and biogenesis GO:0099173 postsynapse organization GO:0099173 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a postsynapse. GOC:dos postsynapse morphogenesis GOC:BHF postsynapse organization and biogenesis GOC:mah Any process that modulates the physical form of a presynapse. regulation of presynapse organisation regulation of presynapse structure biological_process regulation of presynapse organization and biogenesis GO:0099174 regulation of presynapse organization GO:0099174 Any process that modulates the physical form of a presynapse. GOC:ai GOC:dph GOC:tb regulation of presynapse organisation GOC:mah regulation of presynapse organization and biogenesis GOC:mah Any process that modulates the physical form of a postsynapse. regulation of postsynapse organisation regulation of postsynapse structure biological_process regulation of postsynapse organization and biogenesis GO:0099175 regulation of postsynapse organization GO:0099175 Any process that modulates the physical form of a postsynapse. GOC:ai GOC:dph GOC:tb regulation of postsynapse organisation GOC:mah regulation of postsynapse organization and biogenesis GOC:mah Any process that modulates the frequency, rate or extent of trans-synaptic signaling. biological_process GO:0099177 regulation of trans-synaptic signaling GO:0099177 Any process that modulates the frequency, rate or extent of trans-synaptic signaling. GOC:dos A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures and their associated proteins in the presynaptic cytoskeleton. dos 2017-12-20T15:05:34Z biological_process GO:0099187 presynaptic cytoskeleton organization GO:0099187 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures and their associated proteins in the presynaptic cytoskeleton. GOC:dos A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising cytoskeletal filaments and their associated proteins in the postsynaptic cytoskeleton. dos 2017-12-20T15:06:57Z biological_process GO:0099188 postsynaptic cytoskeleton organization GO:0099188 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising cytoskeletal filaments and their associated proteins in the postsynaptic cytoskeleton. GOC:dos Fusion of the membrane of a vesicle with the plasma membrane, thereby releasing its contents into the extracellular space. biological_process GO:0099500 vesicle fusion to plasma membrane GO:0099500 Fusion of the membrane of a vesicle with the plasma membrane, thereby releasing its contents into the extracellular space. GOC:aruk GOC:bc ISBN:0071120009 PMID:18618940 The lipid bilayer surrounding an exocytic vesicle. secretory vesicle membrane cellular_component GO:0099501 exocytic vesicle membrane GO:0099501 The lipid bilayer surrounding an exocytic vesicle. GOC:dos A cytoplasmic, membrane bound vesicle that is capable of fusing to the plasma membrane to release its contents into the extracellular space. cellular_component GO:0099503 secretory vesicle GO:0099503 A cytoplasmic, membrane bound vesicle that is capable of fusing to the plasma membrane to release its contents into the extracellular space. GOC:dos A polymer consisting of an indefinite number of protein or protein complex subunits that have polymerised to form a fiber-shaped structure. GO:0043205 cellular_component fibril GO:0099512 supramolecular fiber GO:0099512 A polymer consisting of an indefinite number of protein or protein complex subunits that have polymerised to form a fiber-shaped structure. GOC:dos A component of the cytoskeleton consisting of a homo or heteropolymeric fiber constructed from an indeterminate number of protein subunits. cellular_component GO:0099513 polymeric cytoskeletal fiber GO:0099513 A component of the cytoskeleton consisting of a homo or heteropolymeric fiber constructed from an indeterminate number of protein subunits. GOC:dos The transport of organelles or other particles from one location in the cell to another along actin filaments. tb 2009-05-27T10:56:08Z biological_process GO:0099515 actin filament-based transport GO:0099515 The transport of organelles or other particles from one location in the cell to another along actin filaments. GOC:dos GOC:dph GOC:mah GOC:tb The directed movement of a vesicle along a cytoskeletal fiber such as a microtubule or and actin filament, mediated by motor proteins. cytoskeletal fiber-based vesicle localization vesicle cytoskeletal transport biological_process GO:0099518 vesicle cytoskeletal trafficking GO:0099518 The directed movement of a vesicle along a cytoskeletal fiber such as a microtubule or and actin filament, mediated by motor proteins. GOC:ecd GOC:rl cytoskeletal fiber-based vesicle localization GOC:rl The directed movement of dense core granules along cytoskeletal fibers, such as microtubules or actin filaments. dense core vesicle cytoskeletal trafficking biological_process GO:0099519 dense core granule cytoskeletal transport GO:0099519 The directed movement of dense core granules along cytoskeletal fibers, such as microtubules or actin filaments. GOC:kmv PMID:23358451 Any (proper) part of the cytosol of a single cell of sufficient size to still be considered cytosol. region of cytosol cellular_component GO:0099522 cytosolic region GO:0099522 Any (proper) part of the cytosol of a single cell of sufficient size to still be considered cytosol. GOC:dos The region of the cytosol consisting of all cytosol that is part of the presynapse. cellular_component GO:0099523 presynaptic cytosol GO:0099523 The region of the cytosol consisting of all cytosol that is part of the presynapse. GOC:dos The region of the cytosol consisting of all cytosol that is part of the postsynapse. cellular_component GO:0099524 postsynaptic cytosol GO:0099524 The region of the cytosol consisting of all cytosol that is part of the postsynapse. GOC:dos The pathway leading to secretion of a neurotransmitter from the presynapse as part of synaptic transmission. biological_process GO:0099531 presynaptic process involved in chemical synaptic transmission GO:0099531 The pathway leading to secretion of a neurotransmitter from the presynapse as part of synaptic transmission. GOC:dos Cell-cell signaling to, from or within a synapse. biological_process GO:0099536 synaptic signaling GO:0099536 Cell-cell signaling to, from or within a synapse. GOC:dos Cell-cell signaling in either direction across the synaptic cleft. biological_process GO:0099537 trans-synaptic signaling GO:0099537 Cell-cell signaling in either direction across the synaptic cleft. GOC:dos Cell-cell signaling to or from a synapse, mediated by a peptide. biological_process GO:0099538 synaptic signaling via neuropeptide GO:0099538 Cell-cell signaling to or from a synapse, mediated by a peptide. GOC:dos Cell-cell signaling between presynapse and postsynapse mediated by a peptide ligand crossing the synaptic cleft. biological_process GO:0099540 trans-synaptic signaling by neuropeptide GO:0099540 Cell-cell signaling between presynapse and postsynapse mediated by a peptide ligand crossing the synaptic cleft. GOC:dos Cell-cell signaling from post to pre-synapse, across the synaptic cleft, mediated by a lipid. biological_process GO:0099541 trans-synaptic signaling by lipid GO:0099541 Cell-cell signaling from post to pre-synapse, across the synaptic cleft, mediated by a lipid. GOC:dos Any process that modulates synaptic transmission by regulating translation occurring at the synapse. biological_process GO:0099547 Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua. regulation of translation at synapse, modulating synaptic transmission GO:0099547 Any process that modulates synaptic transmission by regulating translation occurring at the synapse. GOC:dos Cell-cell signaling between presynapse and postsynapse, across the synaptic cleft, that modulates the synaptic transmission properties of the synapse. biological_process GO:0099550 Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua. trans-synaptic signaling, modulating synaptic transmission GO:0099550 Cell-cell signaling between presynapse and postsynapse, across the synaptic cleft, that modulates the synaptic transmission properties of the synapse. GOC:dos Cell-cell signaling between presynapse and postsynapse, via the vesicular release and reception of neuropeptide molecules, that modulates the synaptic transmission properties of the synapse. biological_process GO:0099551 Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua. trans-synaptic signaling by neuropeptide, modulating synaptic transmission GO:0099551 Cell-cell signaling between presynapse and postsynapse, via the vesicular release and reception of neuropeptide molecules, that modulates the synaptic transmission properties of the synapse. GOC:dos Cell-cell signaling between presynapse and postsynapse, via the release and reception of lipid molecules, that modulates the synaptic transmission properties of the synapse. biological_process GO:0099552 Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua. trans-synaptic signaling by lipid, modulating synaptic transmission GO:0099552 Cell-cell signaling between presynapse and postsynapse, via the release and reception of lipid molecules, that modulates the synaptic transmission properties of the synapse. GOC:dos PMID:21531987 Any (proper) part of the cytoplasm of a single cell of sufficient size to still be considered cytoplasm. cellular_component GO:0099568 cytoplasmic region GO:0099568 Any (proper) part of the cytoplasm of a single cell of sufficient size to still be considered cytoplasm. GOC:dos The portion of the cytoskeleton contained within the presynapse. cellular_component GO:0099569 presynaptic cytoskeleton GO:0099569 The portion of the cytoskeleton contained within the presynapse. GOC:dos The portion of the cytoskeleton contained within the postsynapse. cellular_component GO:0099571 postsynaptic cytoskeleton GO:0099571 The portion of the cytoskeleton contained within the postsynapse. GOC:dos PMID:19889835 Any process that modulates synaptic transmission by regulating translation occurring at the presynapse. biological_process GO:0099577 Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua. regulation of translation at presynapse, modulating synaptic transmission GO:0099577 Any process that modulates synaptic transmission by regulating translation occurring at the presynapse. GOC:dos Any process that modulates synaptic transmission by regulating translation occurring at the postsynapse. biological_process GO:0099578 Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua. regulation of translation at postsynapse, modulating synaptic transmission GO:0099578 Any process that modulates synaptic transmission by regulating translation occurring at the postsynapse. GOC:dos The directed movement of inorganic ions from outside of a cell, across the plasma membrane and into the cytosol. inorganic ion import into cell biological_process GO:0099587 inorganic ion import across plasma membrane GO:0099587 The directed movement of inorganic ions from outside of a cell, across the plasma membrane and into the cytosol. GOC:dos A process in which a protein is transported to or maintained in a location within an axon. biological_process GO:0099612 protein localization to axon GO:0099612 A process in which a protein is transported to or maintained in a location within an axon. GOC:dos PMID:26157139 A process in which protein is transported from one region of the plasma membrane to another. biological_process GO:0099632 protein transport within plasma membrane GO:0099632 A process in which protein is transported from one region of the plasma membrane to another. GOC:dos The directed movement of proteins along microtubules in neuron projections. axonal protein transport biological_process GO:0099640 axo-dendritic protein transport GO:0099640 The directed movement of proteins along microtubules in neuron projections. ISBN:0815316194 The directed movement of proteins along microtubules from the cell body toward the cell periphery in nerve cell axons. anterograde axon cargo transport biological_process GO:0099641 anterograde axonal protein transport GO:0099641 The directed movement of proteins along microtubules from the cell body toward the cell periphery in nerve cell axons. GOC:dos The directed movement of proteins along microtubules from the cell periphery toward the cell body in nerve cell axons. retrograde axon cargo transport biological_process GO:0099642 retrograde axonal protein transport GO:0099642 The directed movement of proteins along microtubules from the cell periphery toward the cell body in nerve cell axons. ISBN:0815316194 Any signal release from a synapse. biological_process GO:0099643 signal release from synapse GO:0099643 Any signal release from a synapse. GOC:dos The complete extent of cell cortex that underlies some some region of the plasma membrane. perimembrane region cellular_component GO:0099738 cell cortex region GO:0099738 The complete extent of cell cortex that underlies some some region of the plasma membrane. GOC:dos Any action potential process that regulates skeletal muscle contraction. cjm 2015-04-02T04:13:19Z biological_process GO:0100001 regulation of skeletal muscle contraction by action potential GO:0100001 Any action potential process that regulates skeletal muscle contraction. GOC:cjm GOC:obol The multiplication or reproduction of blood vessel endothelial cells, resulting in the expansion of a cell population. biological_process GO:0101023 vascular endothelial cell proliferation GO:0101023 The multiplication or reproduction of blood vessel endothelial cells, resulting in the expansion of a cell population. GOC:BHF GOC:BHF_telomere GOC:nc PMID:23201774 A mitotic cell cycle process which results in the assembly, arrangement, or disassembly of the nuclear inner or outer membrane during mitosis. nuclear membrane organization involved in mitotic nuclear division biological_process GO:0101024 This process only occurs in organisms which undergo 'closed mitosis' without nuclear breakdown. mitotic nuclear membrane organization GO:0101024 A mitotic cell cycle process which results in the assembly, arrangement, or disassembly of the nuclear inner or outer membrane during mitosis. GOC:vw PMID:15147872 The process in which a nuclear membrane is synthesized, aggregates, and bonds together. biological_process GO:0101025 nuclear membrane biogenesis GO:0101025 The process in which a nuclear membrane is synthesized, aggregates, and bonds together. GOC:vw A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a neuron, e.g. an axon, or a dendrite. hjd 2017-06-23T18:30:18Z biological_process GO:0106027 neuron projection organization GO:0106027 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a neuron, e.g. an axon, or a dendrite. GOC:aruk GOC:bc PMID:11585923 Any process that modulates the frequency, rate or extent of vesicle fusion with Golgi apparatus. hjd 2019-06-27T15:12:22Z biological_process GO:0106214 regulation of vesicle fusion with Golgi apparatus GO:0106214 Any process that modulates the frequency, rate or extent of vesicle fusion with Golgi apparatus. GOC:se PMID:26195667 Any process that stops, prevents or reduces the frequency, rate or extent of vesicle fustion with Golgi apparatus. hjd 2019-06-27T15:17:17Z biological_process GO:0106215 negative regulation of vesicle fusion with Golgi apparatus GO:0106215 Any process that stops, prevents or reduces the frequency, rate or extent of vesicle fustion with Golgi apparatus. GOC:se PMID:26195667 Any process that activates or increases the frequency, rate or extent of vesicle fusion with Golgi apparatus. hjd 2019-06-27T15:20:59Z biological_process GO:0106216 positive regulation of vesicle fusion with Golgi apparatus GO:0106216 Any process that activates or increases the frequency, rate or extent of vesicle fusion with Golgi apparatus. GOC:se PMID:26195667 Any process that modulates the frequency, rate or extent of the assembly, disassembly or arrangement of constituent parts of the basement membrane. kmv biological_process GO:0110011 regulation of basement membrane organization GO:0110011 Any process that modulates the frequency, rate or extent of the assembly, disassembly or arrangement of constituent parts of the basement membrane. GOC:ha PMID:27404358 Any process that modulates the frequency, rate or extent of the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin or paramyosin. kmv 2017-06-20T19:28:58Z biological_process GO:0110020 regulation of actomyosin structure organization GO:0110020 Any process that modulates the frequency, rate or extent of the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin or paramyosin. GOC:lf PMID:22790195 The multiplication or reproduction of cardiac muscle myoblasts, resulting in the expansion of a cardiac muscle myoblast cell population. A cardiac myoblast is a precursor cell that has been committed to a cardiac muscle cell fate but retains the ability to divide and proliferate throughout life. kmv 2017-06-29T14:35:24Z biological_process GO:0110021 cardiac muscle myoblast proliferation GO:0110021 The multiplication or reproduction of cardiac muscle myoblasts, resulting in the expansion of a cardiac muscle myoblast cell population. A cardiac myoblast is a precursor cell that has been committed to a cardiac muscle cell fate but retains the ability to divide and proliferate throughout life. GOC:BHF GOC:BHF_miRNA GOC:rph PMID:26512644 Any process that modulates the frequency, rate or extent of cardiac muscle myoblast proliferation. kmv 2017-06-29T15:11:47Z biological_process GO:0110022 regulation of cardiac muscle myoblast proliferation GO:0110022 Any process that modulates the frequency, rate or extent of cardiac muscle myoblast proliferation. GOC:BHF GOC:BHF_miRNA GOC:rph PMID:26512644 Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle myoblast proliferation. kmv 2017-06-29T15:18:30Z biological_process GO:0110023 negative regulation of cardiac muscle myoblast proliferation GO:0110023 Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle myoblast proliferation. GOC:BHF GOC:BHF_miRNA GOC:rph PMID:26512644 Any process that activates or increases the frequency, rate or extent of cardiac muscle myoblast proliferation. kmv 2017-06-29T15:24:16Z biological_process GO:0110024 positive regulation of cardiac muscle myoblast proliferation GO:0110024 Any process that activates or increases the frequency, rate or extent of cardiac muscle myoblast proliferation. GOC:BHF GOC:BHF_miRNA GOC:rph PMID:26512644 Any process that modulates the frequency, rate or extent of actin filament organization. kmv 2017-09-20T19:52:57Z biological_process GO:0110053 regulation of actin filament organization GO:0110053 Any process that modulates the frequency, rate or extent of actin filament organization. GOC:kmv Any process that modulates the frequency, rate or extent of blood vessel endothelial cell differentiation. kmv 2017-10-23T14:32:09Z biological_process GO:0110057 regulation of blood vessel endothelial cell differentiation GO:0110057 Any process that modulates the frequency, rate or extent of blood vessel endothelial cell differentiation. GOC:BHF GOC:BHF_miRNA GOC:rph PMID:23072816 Any process that activates or increases the frequency, rate or extent of blood vessel endothelial cell differentiation. kmv 2017-10-23T14:38:19Z biological_process GO:0110058 positive regulation of blood vessel endothelial cell differentiation GO:0110058 Any process that activates or increases the frequency, rate or extent of blood vessel endothelial cell differentiation. GOC:BHF GOC:BHF_miRNA GOC:rph PMID:23072816 Any process that stops, prevents, or reduces the frequency, rate or extent of blood vessel endothelial cell differentiation. kmv 2017-10-23T14:47:29Z biological_process GO:0110059 negative regulation of blood vessel endothelial cell differentiation GO:0110059 Any process that stops, prevents, or reduces the frequency, rate or extent of blood vessel endothelial cell differentiation. GOC:BHF GOC:BHF_miRNA GOC:rph PMID:23072816 A cellular transport process in which transported substances are moved in extracellular vesicles between cells; transported substances are enclosed in the vesicle lumen or located in the extracellular vesicle membrane. kmv 2018-01-29T14:46:52Z biological_process endosomal trafficking GO:0110077 vesicle-mediated intercellular transport GO:0110077 A cellular transport process in which transported substances are moved in extracellular vesicles between cells; transported substances are enclosed in the vesicle lumen or located in the extracellular vesicle membrane. GOC:sp PMID:29328915 PMID:29328916 Any process that activates or increases the frequency, rate or extent of animal organ morphogenesis. kmv 2018-07-05T14:10:14Z biological_process GO:0110110 positive regulation of animal organ morphogenesis GO:0110110 Any process that activates or increases the frequency, rate or extent of animal organ morphogenesis. GOC:kmv Any process that stops, prevents, or reduces the frequency, rate or extent of animal organ morphogenesis. kmv 2018-07-05T14:25:21Z biological_process GO:0110111 negative regulation of animal organ morphogenesis GO:0110111 Any process that stops, prevents, or reduces the frequency, rate or extent of animal organ morphogenesis. GOC:kmv Any process that modulates the frequency, rate or extent of compound eye photoreceptor cell differentiation. kmv 2018-07-16T18:08:49Z biological_process GO:0110116 regulation of compound eye photoreceptor cell differentiation GO:0110116 Any process that modulates the frequency, rate or extent of compound eye photoreceptor cell differentiation. GOC:ha PMID:16377567 Any process that activates or increases the frequency, rate or extent of compound eye photoreceptor cell differentiation. kmv 2018-07-16T18:13:28Z biological_process GO:0110117 positive regulation of compound eye photoreceptor cell differentiation GO:0110117 Any process that activates or increases the frequency, rate or extent of compound eye photoreceptor cell differentiation. GOC:ha PMID:16377567 Any process that stops, prevents, or reduces the frequency, rate or extent of compound eye photoreceptor cell differentiation. kmv 2018-07-16T18:15:52Z biological_process GO:0110118 negative regulation of compound eye photoreceptor cell differentiation GO:0110118 Any process that stops, prevents, or reduces the frequency, rate or extent of compound eye photoreceptor cell differentiation. GOC:ha PMID:16377567 The orderly movement of a myotube cell from one site to another, often during the development of a multicellular organism. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate, and fuse. kmv 2018-08-22T20:58:09Z biological_process GO:0110122 myotube cell migration GO:0110122 The orderly movement of a myotube cell from one site to another, often during the development of a multicellular organism. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate, and fuse. GOC:ha PMID:29122742 Any process that modulates the frequency, rate or extent of myotube cell migration. kmv 2018-08-22T21:06:53Z biological_process GO:0110123 regulation of myotube cell migration GO:0110123 Any process that modulates the frequency, rate or extent of myotube cell migration. GOC:ha PMID:29122742 Any process that activates, maintains or increases the frequency, rate or extent of myotube cell migration. kmv 2018-08-22T21:09:38Z biological_process GO:0110124 positive regulation of myotube cell migration GO:0110124 Any process that activates, maintains or increases the frequency, rate or extent of myotube cell migration. GOC:ha PMID:29122742 Any process that stops, prevents, or reduces the frequency, rate or extent of myotube cell migration. kmv 2018-08-22T21:12:47Z biological_process GO:0110125 negative regulation of myotube cell migration GO:0110125 Any process that stops, prevents, or reduces the frequency, rate or extent of myotube cell migration. GOC:ha PMID:29122742 A part of a cellular organism consisting of a material entity with granularity above the level of a protein complex but below that of an anatomical system. Note that cellular organisms exclude viruses. kmv 2019-08-12T18:01:37Z cellular anatomical entity cellular_component GO:0110165 cellular anatomical structure GO:0110165 A part of a cellular organism consisting of a material entity with granularity above the level of a protein complex but below that of an anatomical system. Note that cellular organisms exclude viruses. GOC:kmv A prolongation or process extending from a cell and that is bounded by plasma membrane, e.g. a cilium, lamellipodium, or axon. krc 2017-03-21T17:26:07Z cellular_component GO:0120025 plasma membrane bounded cell projection GO:0120025 A prolongation or process extending from a cell and that is bounded by plasma membrane, e.g. a cilium, lamellipodium, or axon. GOC:krc Formation of a prolongation or process extending and that is bounded by plasma membrane, e.g. a cilium, lamellipodium, or axon. krc 2017-04-24T23:56:08Z eupodium biological_process GO:0120031 plasma membrane bounded cell projection assembly GO:0120031 Formation of a prolongation or process extending and that is bounded by plasma membrane, e.g. a cilium, lamellipodium, or axon. GOC:krc eupodium GOC:krc GOC:rjd PMID:10328951 PMID:9096956 Any process that modulates the rate, frequency, or extent of plasma membrane bounded cell projection assembly. krc 2017-04-26T04:27:04Z biological_process GO:0120032 regulation of plasma membrane bounded cell projection assembly GO:0120032 Any process that modulates the rate, frequency, or extent of plasma membrane bounded cell projection assembly. GOC:krc Any process that stops, prevents or reduces the frequency, rate or extent of plasma membrane bounded cell projection assembly. krc 2017-04-26T04:34:31Z biological_process GO:0120033 negative regulation of plasma membrane bounded cell projection assembly GO:0120033 Any process that stops, prevents or reduces the frequency, rate or extent of plasma membrane bounded cell projection assembly. GOC:krc Any process that activates or increases the frequency, rate or extent of plasma membrane bounded cell projection assembly. krc 2017-04-26T04:34:45Z biological_process GO:0120034 positive regulation of plasma membrane bounded cell projection assembly GO:0120034 Any process that activates or increases the frequency, rate or extent of plasma membrane bounded cell projection assembly. GOC:krc Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of plasma membrane bounded cell projections. krc 2017-04-26T16:02:06Z biological_process GO:0120035 regulation of plasma membrane bounded cell projection organization GO:0120035 Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of plasma membrane bounded cell projections. GOC:krc A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a plasma membrane bounded prolongation or process extending from a cell, e.g. a cilium or axon. krc 2017-04-26T16:07:02Z biological_process GO:0120036 plasma membrane bounded cell projection organization GO:0120036 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a plasma membrane bounded prolongation or process extending from a cell, e.g. a cilium or axon. GOC:krc The process in which the anatomical structures of a plasma membrane bounded cell projection are generated and organized. krc 2017-04-28T23:39:37Z biological_process GO:0120039 plasma membrane bounded cell projection morphogenesis GO:0120039 The process in which the anatomical structures of a plasma membrane bounded cell projection are generated and organized. GOC:krc All of the contents of a plasma membrane bounded neuron projection, excluding the plasma membrane surrounding the projection. krc 2017-11-01T18:58:12Z cellular_component GO:0120111 neuron projection cytoplasm GO:0120111 All of the contents of a plasma membrane bounded neuron projection, excluding the plasma membrane surrounding the projection. GOC:ha The chemical reactions and pathways resulting in the formation of any steroid hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone. krc 2019-05-20T22:34:00Z biological_process GO:0120178 steroid hormone biosynthetic process GO:0120178 The chemical reactions and pathways resulting in the formation of any steroid hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone. GOC:krc GOC:nln Any process that stops, prevents, or reduces the frequency, rate or extent of protein localization to chromatin. krc 2018-07-14T00:19:32Z negative regulation of protein localisation to chromatin biological_process GO:0120186 negative regulation of protein localization to chromatin GO:0120186 Any process that stops, prevents, or reduces the frequency, rate or extent of protein localization to chromatin. PMID:20889714 PMID:29899453 negative regulation of protein localisation to chromatin GOC:krc Any process that activates or increases the frequency, rate or extent of protein localization to chromatin. krc 2018-07-14T00:21:28Z positive regulation of protein localisation to chromatin biological_process GO:0120187 positive regulation of protein localization to chromatin GO:0120187 Any process that activates or increases the frequency, rate or extent of protein localization to chromatin. PMID:20889714 PMID:29899453 positive regulation of protein localisation to chromatin GOC:krc Any process that modulates the frequency, rate or extent of blastocyst development. krc 2020-02-17T19:59:20Z biological_process GO:0120222 regulation of blastocyst development GO:0120222 Any process that modulates the frequency, rate or extent of blastocyst development. GOC:krc PMID:29593216 The process in which the larynx is generated and organized. The larynx is a continuation of the pharynx that is involved in breathing, sound production, and protecting the trachea against food aspiration. krc 2020-02-22T01:42:04Z laryngeal morphogenesis biological_process GO:0120223 larynx morphogenesis GO:0120223 The process in which the larynx is generated and organized. The larynx is a continuation of the pharynx that is involved in breathing, sound production, and protecting the trachea against food aspiration. GOC:krc PMID:28177282 laryngeal morphogenesis GOC:krc PMID:28177282 The biological process whose specific outcome is the progression of a larynx from an initial condition to its mature state. This process begins with the formation of the larynx and ends with the mature structure. A larynx is a continuation of the pharynx that is involved in breathing, sound production, and protecting the trachea against food aspiration. krc 2020-02-24T17:13:10Z biological_process GO:0120224 larynx development GO:0120224 The biological process whose specific outcome is the progression of a larynx from an initial condition to its mature state. This process begins with the formation of the larynx and ends with the mature structure. A larynx is a continuation of the pharynx that is involved in breathing, sound production, and protecting the trachea against food aspiration. GOC:krc PMID:28177282 A process in which a protein is transported to, or maintained in, a location within a motile cilium. krc 2020-06-05T23:43:04Z biological_process protein localization to nonmotile primary cilium GO:0120229 protein localization to motile cilium GO:0120229 A process in which a protein is transported to, or maintained in, a location within a motile cilium. GOC:krc PMID:27486780 The flow of blood through the network of arteries and veins supplying the cerebrum, enabling the transport of nutrients to the tissues and the removal of waste products. krc 2020-10-20T19:13:51Z cerebrum blood circulation telencephelon blood circulation biological_process GO:0120275 cerebral blood circulation GO:0120275 The flow of blood through the network of arteries and veins supplying the cerebrum, enabling the transport of nutrients to the tissues and the removal of waste products. GOC:krc PMID:25397684 Any process that modulates the frequency, rate or extent of cerebral blood circulation. krc 2020-10-21T06:52:22Z regulation of cerebrum blood circulation regulation of telencephalon blood circulation biological_process GO:0120276 regulation of cerebral blood circulation GO:0120276 Any process that modulates the frequency, rate or extent of cerebral blood circulation. GOC:krc PMID:25397684 Any process that activates or increases the frequency, rate or extent of cerebral blood circulation. krc 2020-10-21T06:55:42Z positive regulation of cerebrum blood circulation positive regulation of telencephalon blood circulation up regulation of cerebral blood circulation up-regulation of cerebral blood circulation upregulation of cerebral blood circulation activation of cerebral blood circulation biological_process GO:0120277 positive regulation of cerebral blood circulation GO:0120277 Any process that activates or increases the frequency, rate or extent of cerebral blood circulation. GOC:krc PMID:25397684 Any process that stops, prevents or reduces the frequency, rate or extent of cerebral blood circulation. krc 2020-10-21T07:02:05Z down regulation of cerebral blood circulation down-regulation of cerebral blood circulation downregulation of cerebral blood circulation negative regulation of cerebrum blood circulation negative regulation of telencephalon blood circulation inhibition of cerebral blood circulation biological_process GO:0120278 negative regulation of cerebral blood circulation GO:0120278 Any process that stops, prevents or reduces the frequency, rate or extent of cerebral blood circulation. GOC:krc PMID:25397684 Any process that modulates the frequency, rate or extent of the deposition or modulates the distribution of coloring matter in an organism. krc 2021-02-09T19:37:35Z biological_process GO:0120305 regulation of pigmentation GO:0120305 Any process that modulates the frequency, rate or extent of the deposition or modulates the distribution of coloring matter in an organism. GOC:krc The developmental process pertaining to the initial formation of an endothelial tube. krc 2022-05-25T16:17:59Z biological_process GO:0120331 endothelial tube formation GO:0120331 The developmental process pertaining to the initial formation of an endothelial tube. GOC:sl PMID:23239824 The initial formation of a spherical embryonic mass of blastomeres formed before the blastula and resulting from cleavage of the fertilized ovum. pg 2024-11-12T09:29:56Z biological_process GO:0140001 morula formation GO:0140001 The initial formation of a spherical embryonic mass of blastomeres formed before the blastula and resulting from cleavage of the fertilized ovum. PMID:37935903 PMID:38386558 PMID:39361745 One of the two nuclear divisions that occur as part of the meiotic cell cycle. pg 2017-03-23T09:40:00Z meiosis biological_process GO:0140013 meiotic nuclear division GO:0140013 One of the two nuclear divisions that occur as part of the meiotic cell cycle. PMID:9334324 A mitotic cell cycle process comprising the steps by which the nucleus of a eukaryotic cell divides; the process involves condensation of chromosomal DNA into a highly compacted form. Canonically, mitosis produces two daughter nuclei whose chromosome complement is identical to that of the mother cell. pg 2017-03-23T14:44:23Z mitosis biological_process GO:0140014 mitotic nuclear division GO:0140014 A mitotic cell cycle process comprising the steps by which the nucleus of a eukaryotic cell divides; the process involves condensation of chromosomal DNA into a highly compacted form. Canonically, mitosis produces two daughter nuclei whose chromosome complement is identical to that of the mother cell. ISBN:0198547684 The cellular processes that contribute to exocytosis. pg 2017-05-15T13:20:45Z biological_process GO:0140029 exocytic process GO:0140029 The cellular processes that contribute to exocytosis. Wikipedia:Exocytosis The process by which an organelle membrane interacts with another membrane via molecular tethers that physically bridge the two membranes and attach them to each other. pg 2017-06-27T09:58:51Z biological_process GO:0140056 organelle localization by membrane tethering GO:0140056 The process by which an organelle membrane interacts with another membrane via molecular tethers that physically bridge the two membranes and attach them to each other. PMID:27875684 The assembly and secretion a set of components to form an extracellular vesicule, a membrane-bounded vesicle that is released into the extracellular region. Extracellular vesicles include exosomes, microvesicles and apoptotic bodies, based on the mechanism by which they are released from cells and differentiated based on their size and content. pg 2017-10-23T11:53:42Z extracellular vesicle assembly biological_process GO:0140112 extracellular vesicle biogenesis GO:0140112 The assembly and secretion a set of components to form an extracellular vesicule, a membrane-bounded vesicle that is released into the extracellular region. Extracellular vesicles include exosomes, microvesicles and apoptotic bodies, based on the mechanism by which they are released from cells and differentiated based on their size and content. PMID:28736435 The directed movement of some substance from inside of a cell, across the plasma membrane and into the extracellular region. pg 2017-10-24T14:38:16Z efflux biological_process GO:0140115 export across plasma membrane GO:0140115 The directed movement of some substance from inside of a cell, across the plasma membrane and into the extracellular region. GOC:pg The directed movement of an ammonium ion from outside of a cell, across the plasma membrane and into the cytosol. pg 2018-01-26T12:39:56Z biological_process GO:0140157 ammonium import across plasma membrane GO:0140157 The directed movement of an ammonium ion from outside of a cell, across the plasma membrane and into the cytosol. GOC:vw PMID:16999738 Translation that occurs at the presynapse. pg 2018-07-13T13:00:33Z biological_process GO:0140236 Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua. translation at presynapse GO:0140236 Translation that occurs at the presynapse. PMID:27321671 Translation that occurs at the presynapse, and that modulates chemical synaptic transmission. pg 2018-07-13T13:07:23Z biological_process GO:0140237 Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua. translation at presynapse, modulating chemical synaptic transmission GO:0140237 Translation that occurs at the presynapse, and that modulates chemical synaptic transmission. PMID:27321671 Translation that occurs at the synapse. pg 2018-07-15T09:23:12Z biological_process GO:0140241 Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua. translation at synapse GO:0140241 Translation that occurs at the synapse. PMID:23083742 Translation that occurs at the postsynapse. pg 2018-07-15T09:26:27Z biological_process GO:0140242 Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua. translation at postsynapse GO:0140242 Translation that occurs at the postsynapse. PMID:20427644 Any process that regulates translation occurring at the synapse. pg 2018-07-15T09:38:26Z biological_process GO:0140243 Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua. regulation of translation at synapse GO:0140243 Any process that regulates translation occurring at the synapse. PMID:20427644 Any process that regulates translation occurring at the presynapse. pg 2018-07-15T09:38:33Z biological_process GO:0140244 Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua. regulation of translation at presynapse GO:0140244 Any process that regulates translation occurring at the presynapse. PMID:20427644 Any process that regulates translation occurring at the postsynapse. pg 2018-07-15T09:38:54Z biological_process GO:0140245 Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua. regulation of translation at postsynapse GO:0140245 Any process that regulates translation occurring at the postsynapse. PMID:20427644 A cellular process in which two or more cells combine together, their plasma membrane fusing, producing a single cell. In some cases, nuclei fuse, producing a polyploid cell, while in other cases, nuclei remain separate, producing a syncytium. pg 2018-08-13T18:38:18Z cell fusion cell cell fusion biological_process GO:0140253 cell-cell fusion GO:0140253 A cellular process in which two or more cells combine together, their plasma membrane fusing, producing a single cell. In some cases, nuclei fuse, producing a polyploid cell, while in other cases, nuclei remain separate, producing a syncytium. Wikipedia:Cell_fusion The directed movement of some substance from a cell, into the extracellular region. This may occur via transport across the plasma membrane or via exocytosis. pg 2019-05-22T11:20:45Z efflux biological_process GO:0140352 export from cell GO:0140352 The directed movement of some substance from a cell, into the extracellular region. This may occur via transport across the plasma membrane or via exocytosis. GOC:pg The directed movement of a lipid from a cell, into the extracellular region. pg 2019-05-22T11:33:07Z lipid efflux biological_process GO:0140353 lipid export from cell GO:0140353 The directed movement of a lipid from a cell, into the extracellular region. GOC:pg The directed movement of a lipid from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis. pg 2019-05-22T11:38:15Z lipid uptake biological_process GO:0140354 lipid import into cell GO:0140354 The directed movement of a lipid from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis. GOC:pg A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together in the nucleus. pg 2020-09-09T05:12:38Z nuclear complex cellular_component GO:0140513 nuclear protein-containing complex GO:0140513 A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together in the nucleus. GOC:pg The division of a vacuole within a cell to form two or more separate vacuoles. pg 2021-01-04T10:17:58Z biological_process GO:0140572 vacuole fission GO:0140572 The division of a vacuole within a cell to form two or more separate vacuoles. PMID:19643199 The radial migration of a pyramidal neuron along radial glial cells. pg 2021-05-25T12:48:12Z radial glia-dependent neuronal migration biological_process GO:0140650 radial glia-guided pyramidal neuron migration GO:0140650 The radial migration of a pyramidal neuron along radial glial cells. PMID:3760547 The aggregation, arrangement and bonding together of a set of components to form a non-membrane-bounded organelle. pg 2021-08-09T15:30:06Z non-membrane-bounded organelle assembly non-membrane-bounded organelle formation non-membrane-enclosed organelle assembly non-membrane-enclosed organelle formation biological_process GO:0140694 membraneless organelle assembly GO:0140694 The aggregation, arrangement and bonding together of a set of components to form a non-membrane-bounded organelle. PMID:28225081 The directed movement of substances from the cytosol into the Golgi apparatus of a cell. pg 2022-05-16T06:59:22Z biological_process GO:0140820 cytosol to Golgi apparatus transport GO:0140820 The directed movement of substances from the cytosol into the Golgi apparatus of a cell. PMID:28373556 The biosynthetic process resulting in the formation of a nucleic acid. pg 2024-03-25T07:33:40Z biological_process GO:0141187 This term should not be used for direct annotation. It should be possible to make a more specific annotation to one of the children of this term. nucleic acid biosynthetic process GO:0141187 The biosynthetic process resulting in the formation of a nucleic acid. GOC:dph GOC:tb Any process that modulates the frequency, rate or extent of postsynapse assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynapse. bc 2018-05-08T16:38:55Z biological_process GO:0150052 regulation of postsynapse assembly GO:0150052 Any process that modulates the frequency, rate or extent of postsynapse assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynapse. GOC:aruk GOC:bc PMID:16394100 PMID:16672654 PMID:28185854 The process whose specific outcome is the progression of the visual system over time, from its formation to the mature structure, including the eye, parts of the central nervous system (CNS) involved in processing of visual inputs, and connecting nerve pathways. bc 2018-07-23T10:31:58Z biological_process optic pathway development visual pathway development GO:0150063 visual system development GO:0150063 The process whose specific outcome is the progression of the visual system over time, from its formation to the mature structure, including the eye, parts of the central nervous system (CNS) involved in processing of visual inputs, and connecting nerve pathways. GOC:aruk GOC:bc GOC:krc PMID:15004427 PMID:20647017 PMID:22632727 The immediate defensive reaction by neural vertebrate tissue to infection or injury caused by chemical or physical agents. bc 2018-07-26T12:25:34Z nerve tissue inflammatory response nervous tissue inflammatory response neural tissue inflammatory response biological_process GO:0150076 neuroinflammatory response GO:0150076 The immediate defensive reaction by neural vertebrate tissue to infection or injury caused by chemical or physical agents. GOC:aruk GOC:bc PMID:10981966 PMID:11099416 PMID:18164423 Any process that modulates the frequency, rate or extent of neuroinflammatory response. bc 2018-07-26T12:32:18Z biological_process GO:0150077 regulation of neuroinflammatory response GO:0150077 Any process that modulates the frequency, rate or extent of neuroinflammatory response. GOC:aruk GOC:bc PMID:10981966 PMID:11099416 PMID:18164423 Any process that activates or increases the frequency, rate or extent of neuroinflammatory response. bc 2018-07-26T12:35:50Z biological_process GO:0150078 positive regulation of neuroinflammatory response GO:0150078 Any process that activates or increases the frequency, rate or extent of neuroinflammatory response. GOC:aruk GOC:bc Any process that stops, prevents or reduces the frequency, rate or extent of neuroinflammatory response. bc 2018-07-26T12:38:08Z biological_process GO:0150079 negative regulation of neuroinflammatory response GO:0150079 Any process that stops, prevents or reduces the frequency, rate or extent of neuroinflammatory response. GOC:aruk GOC:bc PMID:11099416 PMID:18164423 Cell-cell signaling that mediates the transfer of information from a glial cell to a neuron. This signaling has been shown to be mediated by various molecules, depending on which glial cells release them, and in which tissues the signaling occurs, e.g. microglial cell-derived nerve growth factor (NGF) in the retina, or microglial cell-derived superoxide ions in the cerebellum. bc 2018-12-17T12:28:09Z glia-neuron signaling glia-neuron signalling glia-neurone signaling glia-neurone signalling glial cell- neuron signalling glial cell-neurone signalling glial cell-neurone singaling biological_process GO:0150098 glial cell-neuron signaling GO:0150098 Cell-cell signaling that mediates the transfer of information from a glial cell to a neuron. This signaling has been shown to be mediated by various molecules, depending on which glial cells release them, and in which tissues the signaling occurs, e.g. microglial cell-derived nerve growth factor (NGF) in the retina, or microglial cell-derived superoxide ions in the cerebellum. GOC:aruk GOC:bc PMID:14980203 PMID:16144764 PMID:16547515 PMID:18685038 PMID:27788368 PMID:9459440 Cell-cell signaling that mediates the transfer of information from a neuron to a glial cell. This signaling has been shown to be mediated by various molecules released by different types of neurons, e.g. glutamate, gamma-amino butyric acid (GABA), noradrenaline, acetylcholine, dopamine and adenosine. bc 2018-12-17T12:30:12Z neuron-glia signaling neuron-glia signalling neuron-glial cell signalling neurone-glia signaling neurone-glia signalling neurone-glial cell signaling neurone-glial cell signalling biological_process GO:0150099 neuron-glial cell signaling GO:0150099 Cell-cell signaling that mediates the transfer of information from a neuron to a glial cell. This signaling has been shown to be mediated by various molecules released by different types of neurons, e.g. glutamate, gamma-amino butyric acid (GABA), noradrenaline, acetylcholine, dopamine and adenosine. GOC:aruk GOC:bc PMID:10195197 PMID:10196584 PMID:10377338 PMID:10493741 PMID:11356870 PMID:11399439 PMID:15252819 PMID:27788368 A process in which a protein is transported to, or maintained, in a location within a cell-cell junction. bc 2019-06-11T11:00:18Z biological_process GO:0150105 protein localization to cell-cell junction GO:0150105 A process in which a protein is transported to, or maintained, in a location within a cell-cell junction. GOC:aruk GOC:bc PMID:26706435 Any process that modulates the frequency, rate or extent of protein localization to cell-cell junction. bc 2019-06-11T11:17:15Z biological_process GO:0150106 regulation of protein localization to cell-cell junction GO:0150106 Any process that modulates the frequency, rate or extent of protein localization to cell-cell junction. GOC:aruk GOC:bc PMID:26706435 Any process that activates or increases the frequency, rate or extent of protein localization to cell-cell junction. bc 2019-06-11T11:23:58Z biological_process GO:0150107 positive regulation of protein localization to cell-cell junction GO:0150107 Any process that activates or increases the frequency, rate or extent of protein localization to cell-cell junction. GOC:aruk GOC:bc PMID:26706435 Any process that modulates the frequency, rate or extent of transepithelial transport. bc 2019-09-15T07:16:49Z biological_process GO:0150111 regulation of transepithelial transport GO:0150111 Any process that modulates the frequency, rate or extent of transepithelial transport. GOC:aruk PMID:27593915 Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell-cell junction. bc 2019-11-21T13:53:34Z negative regulation of protein localisation to cell-cell junction biological_process GO:0150119 negative regulation of protein localization to cell-cell junction GO:0150119 Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell-cell junction. GOC:aruk GOC:bc The disaggregation of a cell junction into its constituent components. bc 2019-12-08T11:12:13Z biological_process GO:0150146 cell junction disassembly GO:0150146 The disaggregation of a cell junction into its constituent components. GOC:aruk PMID:25490267 The disaggregation of a cell-cell junction into its constituent components. bc 2019-12-08T11:16:14Z biological_process GO:0150147 cell-cell junction disassembly GO:0150147 The disaggregation of a cell-cell junction into its constituent components. GOC:aruk PMID:25490267 The process whose specific outcome is the progression of a somatic sensory system over time from its formation to the mature structure. Somatic sensory system is the sensory system for the sense of touch and pain. rynl 2022-07-07T16:49:26Z somatosensory system development biological_process GO:0160038 somatic sensory system development GO:0160038 The process whose specific outcome is the progression of a somatic sensory system over time from its formation to the mature structure. Somatic sensory system is the sensory system for the sense of touch and pain. PMID:25832476 PMID:31399790 The regulated release of catecholamine by a cell in which the catecholamine acts as a neurotransmitter. rynl 2022-08-17T00:36:44Z biological_process GO:0160043 catecholamine secretion, neurotransmission GO:0160043 The regulated release of catecholamine by a cell in which the catecholamine acts as a neurotransmitter. PMID:10191060 The process of fusing together the edges of a craniofacial suture. rynl 2022-08-19T23:18:54Z biological_process GO:0160048 craniofacial suture closure GO:0160048 The process of fusing together the edges of a craniofacial suture. PMID:33842480 The process whose specific outcome is the progression of cordate pharynx over time, from its formation to the mature structure. rynl 2023-08-29T21:05:28Z biological_process GO:0160093 chordate pharynx development GO:0160093 The process whose specific outcome is the progression of cordate pharynx over time, from its formation to the mature structure. PMID:23020903 Any process that activates or increases the frequency, rate or extent of dendrite development. hjd 2012-01-09T10:41:31Z biological_process up regulation of dendrite development GO:1900006 positive regulation of dendrite development GO:1900006 Any process that activates or increases the frequency, rate or extent of dendrite development. GOC:TermGenie up regulation of dendrite development GOC:TermGenie Any process that modulates the frequency, rate or extent of cytokine production involved in inflammatory response. rph 2012-01-11T09:34:27Z regulation of cytokine production involved in acute inflammatory response biological_process GO:1900015 regulation of cytokine production involved in inflammatory response GO:1900015 Any process that modulates the frequency, rate or extent of cytokine production involved in inflammatory response. GOC:TermGenie regulation of cytokine production involved in acute inflammatory response GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of cytokine production involved in inflammatory response. rph 2012-01-11T09:34:31Z down regulation of cytokine production involved in acute inflammatory response negative regulation of cytokine production involved in acute inflammatory response biological_process down regulation of cytokine production involved in inflammatory response GO:1900016 negative regulation of cytokine production involved in inflammatory response GO:1900016 Any process that stops, prevents or reduces the frequency, rate or extent of cytokine production involved in inflammatory response. GOC:TermGenie down regulation of cytokine production involved in acute inflammatory response GOC:TermGenie negative regulation of cytokine production involved in acute inflammatory response GOC:TermGenie down regulation of cytokine production involved in inflammatory response GOC:TermGenie Any process that activates or increases the frequency, rate or extent of cytokine production involved in inflammatory response. rph 2012-01-11T09:34:35Z up regulation of cytokine production involved in acute inflammatory response positive regulation of cytokine production involved in acute inflammatory response biological_process up regulation of cytokine production involved in inflammatory response GO:1900017 positive regulation of cytokine production involved in inflammatory response GO:1900017 Any process that activates or increases the frequency, rate or extent of cytokine production involved in inflammatory response. GOC:TermGenie up regulation of cytokine production involved in acute inflammatory response GOC:TermGenie positive regulation of cytokine production involved in acute inflammatory response GOC:TermGenie up regulation of cytokine production involved in inflammatory response GOC:TermGenie Any regulation of signal transduction that takes place in the extracellular region. bf 2012-02-22T10:21:48Z regulation of signaling pathway in extracellular region regulation of signalling pathway in extracellular region biological_process GO:1900115 extracellular regulation of signal transduction GO:1900115 Any regulation of signal transduction that takes place in the extracellular region. GOC:TermGenie GOC:signaling regulation of signaling pathway in extracellular region GOC:TermGenie regulation of signalling pathway in extracellular region GOC:TermGenie Any negative regulation of signal transduction that takes place in extracellular region. bf 2012-02-22T10:27:56Z down regulation of signal transduction in extracellular region down-regulation of signal transduction in extracellular region downregulation of signal transduction in extracellular region negative regulation of signaling pathway in extracellular region negative regulation of signalling pathway in extracellular region extracellular inhibition of signaling pathway inhibition of signal transduction in extracellular region biological_process GO:1900116 extracellular negative regulation of signal transduction GO:1900116 Any negative regulation of signal transduction that takes place in extracellular region. GOC:TermGenie GOC:signaling down regulation of signal transduction in extracellular region GOC:TermGenie down-regulation of signal transduction in extracellular region GOC:TermGenie downregulation of signal transduction in extracellular region GOC:TermGenie negative regulation of signaling pathway in extracellular region GOC:TermGenie negative regulation of signalling pathway in extracellular region GOC:TermGenie extracellular inhibition of signaling pathway GOC:bf inhibition of signal transduction in extracellular region GOC:TermGenie Any process that modulates the frequency, rate or extent of execution phase of apoptosis. pr 2012-02-22T11:26:20Z biological_process GO:1900117 regulation of execution phase of apoptosis GO:1900117 Any process that modulates the frequency, rate or extent of execution phase of apoptosis. GOC:TermGenie GOC:mtg_apoptosis Any process that stops, prevents or reduces the frequency, rate or extent of execution phase of apoptosis. pr 2012-02-22T11:26:24Z down regulation of execution phase of apoptosis down-regulation of execution phase of apoptosis downregulation of execution phase of apoptosis inhibition of execution phase of apoptosis biological_process GO:1900118 negative regulation of execution phase of apoptosis GO:1900118 Any process that stops, prevents or reduces the frequency, rate or extent of execution phase of apoptosis. GOC:TermGenie GOC:mtg_apoptosis down regulation of execution phase of apoptosis GOC:TermGenie down-regulation of execution phase of apoptosis GOC:TermGenie downregulation of execution phase of apoptosis GOC:TermGenie inhibition of execution phase of apoptosis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of execution phase of apoptosis. pr 2012-02-22T11:26:27Z up regulation of execution phase of apoptosis up-regulation of execution phase of apoptosis upregulation of execution phase of apoptosis activation of execution phase of apoptosis biological_process GO:1900119 positive regulation of execution phase of apoptosis GO:1900119 Any process that activates or increases the frequency, rate or extent of execution phase of apoptosis. GOC:TermGenie GOC:mtg_apoptosis up regulation of execution phase of apoptosis GOC:TermGenie up-regulation of execution phase of apoptosis GOC:TermGenie upregulation of execution phase of apoptosis GOC:TermGenie activation of execution phase of apoptosis GOC:TermGenie Any process that modulates the frequency, rate or extent of hyaluronan biosynthetic process. yaf 2012-02-23T01:09:21Z regulation of hyaluronan anabolism regulation of hyaluronan biosynthesis regulation of hyaluronan formation regulation of hyaluronan synthesis biological_process GO:1900125 regulation of hyaluronan biosynthetic process GO:1900125 Any process that modulates the frequency, rate or extent of hyaluronan biosynthetic process. GOC:TermGenie GOC:yaf regulation of hyaluronan anabolism GOC:TermGenie regulation of hyaluronan biosynthesis GOC:TermGenie regulation of hyaluronan formation GOC:TermGenie regulation of hyaluronan synthesis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of hyaluronan biosynthetic process. yaf 2012-02-23T01:09:29Z down regulation of hyaluronan anabolism down regulation of hyaluronan biosynthesis down regulation of hyaluronan biosynthetic process down regulation of hyaluronan formation down regulation of hyaluronan synthesis down-regulation of hyaluronan anabolism down-regulation of hyaluronan biosynthesis down-regulation of hyaluronan biosynthetic process down-regulation of hyaluronan formation down-regulation of hyaluronan synthesis downregulation of hyaluronan anabolism downregulation of hyaluronan biosynthesis downregulation of hyaluronan biosynthetic process downregulation of hyaluronan formation downregulation of hyaluronan synthesis inhibition of hyaluronan anabolism inhibition of hyaluronan biosynthesis inhibition of hyaluronan formation inhibition of hyaluronan synthesis negative regulation of hyaluronan anabolism negative regulation of hyaluronan biosynthesis negative regulation of hyaluronan formation negative regulation of hyaluronan synthesis inhibition of hyaluronan biosynthetic process biological_process GO:1900126 negative regulation of hyaluronan biosynthetic process GO:1900126 Any process that stops, prevents or reduces the frequency, rate or extent of hyaluronan biosynthetic process. GOC:TermGenie GOC:yaf down regulation of hyaluronan anabolism GOC:TermGenie down regulation of hyaluronan biosynthesis GOC:TermGenie down regulation of hyaluronan biosynthetic process GOC:TermGenie down regulation of hyaluronan formation GOC:TermGenie down regulation of hyaluronan synthesis GOC:TermGenie down-regulation of hyaluronan anabolism GOC:TermGenie down-regulation of hyaluronan biosynthesis GOC:TermGenie down-regulation of hyaluronan biosynthetic process GOC:TermGenie down-regulation of hyaluronan formation GOC:TermGenie down-regulation of hyaluronan synthesis GOC:TermGenie downregulation of hyaluronan anabolism GOC:TermGenie downregulation of hyaluronan biosynthesis GOC:TermGenie downregulation of hyaluronan biosynthetic process GOC:TermGenie downregulation of hyaluronan formation GOC:TermGenie downregulation of hyaluronan synthesis GOC:TermGenie inhibition of hyaluronan anabolism GOC:TermGenie inhibition of hyaluronan biosynthesis GOC:TermGenie inhibition of hyaluronan formation GOC:TermGenie inhibition of hyaluronan synthesis GOC:TermGenie negative regulation of hyaluronan anabolism GOC:TermGenie negative regulation of hyaluronan biosynthesis GOC:TermGenie negative regulation of hyaluronan formation GOC:TermGenie negative regulation of hyaluronan synthesis GOC:TermGenie inhibition of hyaluronan biosynthetic process GOC:TermGenie Any process that activates or increases the frequency, rate or extent of hyaluronan biosynthetic process. yaf 2012-02-23T01:09:33Z activation of hyaluronan anabolism activation of hyaluronan biosynthesis activation of hyaluronan formation activation of hyaluronan synthesis positive regulation of hyaluronan anabolism positive regulation of hyaluronan biosynthesis positive regulation of hyaluronan formation positive regulation of hyaluronan synthesis up regulation of hyaluronan anabolism up regulation of hyaluronan biosynthesis up regulation of hyaluronan biosynthetic process up regulation of hyaluronan formation up regulation of hyaluronan synthesis up-regulation of hyaluronan anabolism up-regulation of hyaluronan biosynthesis up-regulation of hyaluronan biosynthetic process up-regulation of hyaluronan formation up-regulation of hyaluronan synthesis upregulation of hyaluronan anabolism upregulation of hyaluronan biosynthesis upregulation of hyaluronan biosynthetic process upregulation of hyaluronan formation upregulation of hyaluronan synthesis activation of hyaluronan biosynthetic process biological_process GO:1900127 positive regulation of hyaluronan biosynthetic process GO:1900127 Any process that activates or increases the frequency, rate or extent of hyaluronan biosynthetic process. GOC:TermGenie GOC:yaf activation of hyaluronan anabolism GOC:TermGenie activation of hyaluronan biosynthesis GOC:TermGenie activation of hyaluronan formation GOC:TermGenie activation of hyaluronan synthesis GOC:TermGenie positive regulation of hyaluronan anabolism GOC:TermGenie positive regulation of hyaluronan biosynthesis GOC:TermGenie positive regulation of hyaluronan formation GOC:TermGenie positive regulation of hyaluronan synthesis GOC:TermGenie up regulation of hyaluronan anabolism GOC:TermGenie up regulation of hyaluronan biosynthesis GOC:TermGenie up regulation of hyaluronan biosynthetic process GOC:TermGenie up regulation of hyaluronan formation GOC:TermGenie up regulation of hyaluronan synthesis GOC:TermGenie up-regulation of hyaluronan anabolism GOC:TermGenie up-regulation of hyaluronan biosynthesis GOC:TermGenie up-regulation of hyaluronan biosynthetic process GOC:TermGenie up-regulation of hyaluronan formation GOC:TermGenie up-regulation of hyaluronan synthesis GOC:TermGenie upregulation of hyaluronan anabolism GOC:TermGenie upregulation of hyaluronan biosynthesis GOC:TermGenie upregulation of hyaluronan biosynthetic process GOC:TermGenie upregulation of hyaluronan formation GOC:TermGenie upregulation of hyaluronan synthesis GOC:TermGenie activation of hyaluronan biosynthetic process GOC:TermGenie Any process that modulates the frequency, rate or extent of oligodendrocyte apoptotic process. yaf 2012-03-06T10:22:45Z regulation of oligodendrocyte apoptosis biological_process GO:1900141 regulation of oligodendrocyte apoptotic process GO:1900141 Any process that modulates the frequency, rate or extent of oligodendrocyte apoptotic process. GOC:TermGenie GOC:yaf regulation of oligodendrocyte apoptosis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of oligodendrocyte apoptotic process. yaf 2012-03-06T10:22:50Z down regulation of oligodendrocyte apoptotic process down-regulation of oligodendrocyte apoptotic process downregulation of oligodendrocyte apoptotic process down regulation of oligodendrocyte apoptosis down-regulation of oligodendrocyte apoptosis downregulation of oligodendrocyte apoptosis inhibition of oligodendrocyte apoptosis inhibition of oligodendrocyte apoptotic process negative regulation of oligodendrocyte apoptosis biological_process GO:1900142 negative regulation of oligodendrocyte apoptotic process GO:1900142 Any process that stops, prevents or reduces the frequency, rate or extent of oligodendrocyte apoptotic process. GOC:TermGenie GOC:yaf down regulation of oligodendrocyte apoptotic process GOC:TermGenie down-regulation of oligodendrocyte apoptotic process GOC:TermGenie downregulation of oligodendrocyte apoptotic process GOC:TermGenie down regulation of oligodendrocyte apoptosis GOC:TermGenie down-regulation of oligodendrocyte apoptosis GOC:TermGenie downregulation of oligodendrocyte apoptosis GOC:TermGenie inhibition of oligodendrocyte apoptosis GOC:TermGenie inhibition of oligodendrocyte apoptotic process GOC:TermGenie negative regulation of oligodendrocyte apoptosis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of oligodendrocyte apoptotic process. yaf 2012-03-06T10:22:54Z up regulation of oligodendrocyte apoptotic process up-regulation of oligodendrocyte apoptotic process upregulation of oligodendrocyte apoptotic process activation of oligodendrocyte apoptosis activation of oligodendrocyte apoptotic process positive regulation of oligodendrocyte apoptosis up regulation of oligodendrocyte apoptosis up-regulation of oligodendrocyte apoptosis upregulation of oligodendrocyte apoptosis biological_process GO:1900143 positive regulation of oligodendrocyte apoptotic process GO:1900143 Any process that activates or increases the frequency, rate or extent of oligodendrocyte apoptotic process. GOC:TermGenie GOC:yaf up regulation of oligodendrocyte apoptotic process GOC:TermGenie up-regulation of oligodendrocyte apoptotic process GOC:TermGenie upregulation of oligodendrocyte apoptotic process GOC:TermGenie activation of oligodendrocyte apoptosis GOC:TermGenie activation of oligodendrocyte apoptotic process GOC:TermGenie positive regulation of oligodendrocyte apoptosis GOC:TermGenie up regulation of oligodendrocyte apoptosis GOC:TermGenie up-regulation of oligodendrocyte apoptosis GOC:TermGenie upregulation of oligodendrocyte apoptosis GOC:TermGenie Any process that modulates the frequency, rate or extent of Schwann cell migration. bf 2012-03-06T04:14:50Z biological_process GO:1900147 regulation of Schwann cell migration GO:1900147 Any process that modulates the frequency, rate or extent of Schwann cell migration. GOC:TermGenie GOC:sjw Any process that stops, prevents or reduces the frequency, rate or extent of Schwann cell migration. bf 2012-03-06T04:14:55Z down regulation of Schwann cell migration down-regulation of Schwann cell migration downregulation of Schwann cell migration inhibition of Schwann cell migration biological_process GO:1900148 negative regulation of Schwann cell migration GO:1900148 Any process that stops, prevents or reduces the frequency, rate or extent of Schwann cell migration. GOC:TermGenie GOC:sjw down regulation of Schwann cell migration GOC:TermGenie down-regulation of Schwann cell migration GOC:TermGenie downregulation of Schwann cell migration GOC:TermGenie inhibition of Schwann cell migration GOC:TermGenie Any process that activates or increases the frequency, rate or extent of Schwann cell migration. bf 2012-03-06T04:14:58Z up regulation of Schwann cell migration up-regulation of Schwann cell migration upregulation of Schwann cell migration activation of Schwann cell migration biological_process GO:1900149 positive regulation of Schwann cell migration GO:1900149 Any process that activates or increases the frequency, rate or extent of Schwann cell migration. GOC:TermGenie GOC:sjw up regulation of Schwann cell migration GOC:TermGenie up-regulation of Schwann cell migration GOC:TermGenie upregulation of Schwann cell migration GOC:TermGenie activation of Schwann cell migration GOC:TermGenie Any process that modulates the frequency, rate or extent of protein localization to nucleus. bf 2012-03-12T01:23:44Z regulation of protein localisation to nucleus regulation of protein localization in cell nucleus regulation of protein localization in nucleus biological_process GO:1900180 regulation of protein localization to nucleus GO:1900180 Any process that modulates the frequency, rate or extent of protein localization to nucleus. GOC:TermGenie regulation of protein localisation to nucleus GOC:TermGenie regulation of protein localization in cell nucleus GOC:TermGenie regulation of protein localization in nucleus GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to nucleus. bf 2012-03-12T01:23:48Z down regulation of protein localisation to nucleus down regulation of protein localization in cell nucleus down regulation of protein localization in nucleus down regulation of protein localization to nucleus down-regulation of protein localisation to nucleus down-regulation of protein localization in cell nucleus down-regulation of protein localization in nucleus down-regulation of protein localization to nucleus downregulation of protein localisation to nucleus downregulation of protein localization in cell nucleus downregulation of protein localization in nucleus downregulation of protein localization to nucleus negative regulation of protein localisation to nucleus negative regulation of protein localization in cell nucleus negative regulation of protein localization in nucleus inhibition of protein localisation to nucleus inhibition of protein localization in cell nucleus inhibition of protein localization in nucleus inhibition of protein localization to nucleus biological_process GO:1900181 negative regulation of protein localization to nucleus GO:1900181 Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to nucleus. GOC:TermGenie down regulation of protein localisation to nucleus GOC:TermGenie down regulation of protein localization in cell nucleus GOC:TermGenie down regulation of protein localization in nucleus GOC:TermGenie down regulation of protein localization to nucleus GOC:TermGenie down-regulation of protein localisation to nucleus GOC:TermGenie down-regulation of protein localization in cell nucleus GOC:TermGenie down-regulation of protein localization in nucleus GOC:TermGenie down-regulation of protein localization to nucleus GOC:TermGenie downregulation of protein localisation to nucleus GOC:TermGenie downregulation of protein localization in cell nucleus GOC:TermGenie downregulation of protein localization in nucleus GOC:TermGenie downregulation of protein localization to nucleus GOC:TermGenie negative regulation of protein localisation to nucleus GOC:TermGenie negative regulation of protein localization in cell nucleus GOC:TermGenie negative regulation of protein localization in nucleus GOC:TermGenie inhibition of protein localisation to nucleus GOC:TermGenie inhibition of protein localization in cell nucleus GOC:TermGenie inhibition of protein localization in nucleus GOC:TermGenie inhibition of protein localization to nucleus GOC:TermGenie Any process that activates or increases the frequency, rate or extent of protein localization to nucleus. bf 2012-03-12T01:23:52Z activation of protein localization in nucleus positive regulation of protein localisation to nucleus positive regulation of protein localization in cell nucleus positive regulation of protein localization in nucleus up regulation of protein localisation to nucleus up regulation of protein localization in cell nucleus up regulation of protein localization in nucleus up regulation of protein localization to nucleus up-regulation of protein localisation to nucleus up-regulation of protein localization in cell nucleus up-regulation of protein localization in nucleus up-regulation of protein localization to nucleus upregulation of protein localisation to nucleus upregulation of protein localization in cell nucleus upregulation of protein localization in nucleus upregulation of protein localization to nucleus activation of protein localisation to nucleus activation of protein localization in cell nucleus activation of protein localization to nucleus biological_process GO:1900182 positive regulation of protein localization to nucleus GO:1900182 Any process that activates or increases the frequency, rate or extent of protein localization to nucleus. GOC:TermGenie activation of protein localization in nucleus GOC:TermGenie positive regulation of protein localisation to nucleus GOC:TermGenie positive regulation of protein localization in cell nucleus GOC:TermGenie positive regulation of protein localization in nucleus GOC:TermGenie up regulation of protein localisation to nucleus GOC:TermGenie up regulation of protein localization in cell nucleus GOC:TermGenie up regulation of protein localization in nucleus GOC:TermGenie up regulation of protein localization to nucleus GOC:TermGenie up-regulation of protein localisation to nucleus GOC:TermGenie up-regulation of protein localization in cell nucleus GOC:TermGenie up-regulation of protein localization in nucleus GOC:TermGenie up-regulation of protein localization to nucleus GOC:TermGenie upregulation of protein localisation to nucleus GOC:TermGenie upregulation of protein localization in cell nucleus GOC:TermGenie upregulation of protein localization in nucleus GOC:TermGenie upregulation of protein localization to nucleus GOC:TermGenie activation of protein localisation to nucleus GOC:TermGenie activation of protein localization in cell nucleus GOC:TermGenie activation of protein localization to nucleus GOC:TermGenie Any process that modulates the frequency, rate or extent of oocyte maturation. kmv 2012-03-19T09:41:18Z biological_process GO:1900193 regulation of oocyte maturation GO:1900193 Any process that modulates the frequency, rate or extent of oocyte maturation. GOC:TermGenie GOC:kmv Any process that stops, prevents or reduces the frequency, rate or extent of oocyte maturation. kmv 2012-03-19T09:41:27Z down regulation of oocyte maturation down-regulation of oocyte maturation downregulation of oocyte maturation inhibition of oocyte maturation biological_process GO:1900194 negative regulation of oocyte maturation GO:1900194 Any process that stops, prevents or reduces the frequency, rate or extent of oocyte maturation. GOC:TermGenie GOC:kmv down regulation of oocyte maturation GOC:TermGenie down-regulation of oocyte maturation GOC:TermGenie downregulation of oocyte maturation GOC:TermGenie inhibition of oocyte maturation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of oocyte maturation. kmv 2012-03-19T09:41:35Z up regulation of oocyte maturation up-regulation of oocyte maturation upregulation of oocyte maturation activation of oocyte maturation biological_process GO:1900195 positive regulation of oocyte maturation GO:1900195 Any process that activates or increases the frequency, rate or extent of oocyte maturation. GOC:TermGenie GOC:kmv up regulation of oocyte maturation GOC:TermGenie up-regulation of oocyte maturation GOC:TermGenie upregulation of oocyte maturation GOC:TermGenie activation of oocyte maturation GOC:TermGenie Any process that modulates the frequency, rate or extent of cytoplasmic translational elongation. vw 2012-04-03T05:07:02Z biological_process GO:1900247 regulation of cytoplasmic translational elongation GO:1900247 Any process that modulates the frequency, rate or extent of cytoplasmic translational elongation. GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translational elongation. vw 2012-04-03T05:07:14Z down regulation of cytoplasmic translational elongation down-regulation of cytoplasmic translational elongation downregulation of cytoplasmic translational elongation inhibition of cytoplasmic translational elongation biological_process GO:1900248 negative regulation of cytoplasmic translational elongation GO:1900248 Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translational elongation. GOC:TermGenie down regulation of cytoplasmic translational elongation GOC:TermGenie down-regulation of cytoplasmic translational elongation GOC:TermGenie downregulation of cytoplasmic translational elongation GOC:TermGenie inhibition of cytoplasmic translational elongation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of cytoplasmic translational elongation. vw 2012-04-03T05:07:24Z up regulation of cytoplasmic translational elongation up-regulation of cytoplasmic translational elongation upregulation of cytoplasmic translational elongation activation of cytoplasmic translational elongation biological_process GO:1900249 positive regulation of cytoplasmic translational elongation GO:1900249 Any process that activates or increases the frequency, rate or extent of cytoplasmic translational elongation. GOC:TermGenie up regulation of cytoplasmic translational elongation GOC:TermGenie up-regulation of cytoplasmic translational elongation GOC:TermGenie upregulation of cytoplasmic translational elongation GOC:TermGenie activation of cytoplasmic translational elongation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of defense response to insect. dhl 2012-04-12T04:44:00Z down regulation of defense response to insect down regulation of physiological defense response to insect down-regulation of defense response to insect down-regulation of physiological defense response to insect downregulation of defense response to insect downregulation of physiological defense response to insect negative regulation of physiological defense response to insect inhibition of defense response to insect inhibition of physiological defense response to insect biological_process susceptibility to insect GO:1900366 negative regulation of defense response to insect GO:1900366 Any process that stops, prevents or reduces the frequency, rate or extent of defense response to insect. GOC:TermGenie PMID:22474183 down regulation of defense response to insect GOC:TermGenie down regulation of physiological defense response to insect GOC:TermGenie down-regulation of defense response to insect GOC:TermGenie down-regulation of physiological defense response to insect GOC:TermGenie downregulation of defense response to insect GOC:TermGenie downregulation of physiological defense response to insect GOC:TermGenie negative regulation of physiological defense response to insect GOC:TermGenie inhibition of defense response to insect GOC:TermGenie inhibition of physiological defense response to insect GOC:TermGenie Any process that activates or increases the frequency, rate or extent of defense response to insect. dhl 2012-04-12T04:44:10Z positive regulation of physiological defense response to insect up regulation of defense response to insect up regulation of physiological defense response to insect up-regulation of defense response to insect up-regulation of physiological defense response to insect upregulation of defense response to insect upregulation of physiological defense response to insect activation of defense response to insect activation of physiological defense response to insect biological_process GO:1900367 positive regulation of defense response to insect GO:1900367 Any process that activates or increases the frequency, rate or extent of defense response to insect. GOC:TermGenie PMID:22474183 positive regulation of physiological defense response to insect GOC:TermGenie up regulation of defense response to insect GOC:TermGenie up regulation of physiological defense response to insect GOC:TermGenie up-regulation of defense response to insect GOC:TermGenie up-regulation of physiological defense response to insect GOC:TermGenie upregulation of defense response to insect GOC:TermGenie upregulation of physiological defense response to insect GOC:TermGenie activation of defense response to insect GOC:TermGenie activation of physiological defense response to insect GOC:TermGenie Any process that modulates the frequency, rate or extent of secondary metabolite biosynthetic process. di 2012-04-17T01:55:23Z regulation of secondary metabolite biosynthesis biological_process GO:1900376 regulation of secondary metabolite biosynthetic process GO:1900376 Any process that modulates the frequency, rate or extent of secondary metabolite biosynthetic process. GOC:TermGenie GOC:di regulation of secondary metabolite biosynthesis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of secondary metabolite biosynthetic process. di 2012-04-17T01:55:32Z down regulation of secondary metabolite biosynthesis down regulation of secondary metabolite biosynthetic process down-regulation of secondary metabolite biosynthesis down-regulation of secondary metabolite biosynthetic process downregulation of secondary metabolite biosynthesis downregulation of secondary metabolite biosynthetic process inhibition of secondary metabolite biosynthesis negative regulation of secondary metabolite biosynthesis inhibition of secondary metabolite biosynthetic process biological_process GO:1900377 negative regulation of secondary metabolite biosynthetic process GO:1900377 Any process that stops, prevents or reduces the frequency, rate or extent of secondary metabolite biosynthetic process. GOC:TermGenie GOC:di down regulation of secondary metabolite biosynthesis GOC:TermGenie down regulation of secondary metabolite biosynthetic process GOC:TermGenie down-regulation of secondary metabolite biosynthesis GOC:TermGenie down-regulation of secondary metabolite biosynthetic process GOC:TermGenie downregulation of secondary metabolite biosynthesis GOC:TermGenie downregulation of secondary metabolite biosynthetic process GOC:TermGenie inhibition of secondary metabolite biosynthesis GOC:TermGenie negative regulation of secondary metabolite biosynthesis GOC:TermGenie inhibition of secondary metabolite biosynthetic process GOC:TermGenie Any process that activates or increases the frequency, rate or extent of secondary metabolite biosynthetic process. di 2012-04-17T01:55:41Z activation of secondary metabolite biosynthesis positive regulation of secondary metabolite biosynthesis up regulation of secondary metabolite biosynthesis up regulation of secondary metabolite biosynthetic process up-regulation of secondary metabolite biosynthesis up-regulation of secondary metabolite biosynthetic process upregulation of secondary metabolite biosynthesis upregulation of secondary metabolite biosynthetic process activation of secondary metabolite biosynthetic process biological_process GO:1900378 positive regulation of secondary metabolite biosynthetic process GO:1900378 Any process that activates or increases the frequency, rate or extent of secondary metabolite biosynthetic process. GOC:TermGenie GOC:di activation of secondary metabolite biosynthesis GOC:TermGenie positive regulation of secondary metabolite biosynthesis GOC:TermGenie up regulation of secondary metabolite biosynthesis GOC:TermGenie up regulation of secondary metabolite biosynthetic process GOC:TermGenie up-regulation of secondary metabolite biosynthesis GOC:TermGenie up-regulation of secondary metabolite biosynthetic process GOC:TermGenie upregulation of secondary metabolite biosynthesis GOC:TermGenie upregulation of secondary metabolite biosynthetic process GOC:TermGenie activation of secondary metabolite biosynthetic process GOC:TermGenie The chemical reactions and pathways involving an acetate ester, any carboxylic ester where the carboxylic acid component is acetic acid. bf 2012-05-16T12:29:51Z acetate ester metabolism acetyl ester metabolic process acetyl ester metabolism biological_process GO:1900619 acetate ester metabolic process GO:1900619 The chemical reactions and pathways involving an acetate ester, any carboxylic ester where the carboxylic acid component is acetic acid. GOC:TermGenie acetate ester metabolism GOC:TermGenie acetyl ester metabolic process CHEBI:47622 acetyl ester metabolism CHEBI:47622 The chemical reactions and pathways resulting in the formation of an acetate esteran acetate ester, any carboxylic ester where the carboxylic acid component is acetic acid. bf 2012-05-16T12:30:12Z acetate ester anabolism acetate ester biosynthesis acetate ester formation acetate ester synthesis acetyl ester biosynthesis acetyl ester biosynthetic process biological_process GO:1900620 acetate ester biosynthetic process GO:1900620 The chemical reactions and pathways resulting in the formation of an acetate esteran acetate ester, any carboxylic ester where the carboxylic acid component is acetic acid. GOC:TermGenie PMID:15042596 acetate ester anabolism GOC:TermGenie acetate ester biosynthesis GOC:TermGenie acetate ester formation GOC:TermGenie acetate ester synthesis GOC:TermGenie acetyl ester biosynthesis CHEBI:47622 acetyl ester biosynthetic process CHEBI:47622 The chemical reactions and pathways involving carbohydrate derivative. bf 2012-07-12T04:05:09Z carbohydrate derivative metabolism biological_process GO:1901135 carbohydrate derivative metabolic process GO:1901135 The chemical reactions and pathways involving carbohydrate derivative. GOC:TermGenie carbohydrate derivative metabolism GOC:TermGenie The chemical reactions and pathways resulting in the formation of carbohydrate derivative. bf 2012-07-12T04:05:39Z carbohydrate derivative anabolism carbohydrate derivative biosynthesis carbohydrate derivative formation carbohydrate derivative synthesis biological_process GO:1901137 carbohydrate derivative biosynthetic process GO:1901137 The chemical reactions and pathways resulting in the formation of carbohydrate derivative. GOC:TermGenie carbohydrate derivative anabolism GOC:TermGenie carbohydrate derivative biosynthesis GOC:TermGenie carbohydrate derivative formation GOC:TermGenie carbohydrate derivative synthesis GOC:TermGenie Any gene expression that is involved in extracellular matrix organization. Gene expression includes both transcription to produce an RNA transcript, and the translation of that mRNA into protein. Protein maturation is included in gene expression when required to form an active form of a product from an inactive precursor form. bf 2012-07-16T03:29:30Z expression of extracellular matrix proteins biological_process extracellular matrix protein production GO:1901148 gene expression involved in extracellular matrix organization GO:1901148 Any gene expression that is involved in extracellular matrix organization. Gene expression includes both transcription to produce an RNA transcript, and the translation of that mRNA into protein. Protein maturation is included in gene expression when required to form an active form of a product from an inactive precursor form. GOC:TermGenie GOC:pg PMID:18668558 expression of extracellular matrix proteins GOC:bf extracellular matrix protein production GOC:pg The chemical reactions and pathways involving primary amino compound. bf 2012-07-18T04:44:39Z primary amino compound metabolism biological_process GO:1901160 primary amino compound metabolic process GO:1901160 The chemical reactions and pathways involving primary amino compound. GOC:TermGenie primary amino compound metabolism GOC:TermGenie The chemical reactions and pathways resulting in the formation of primary amino compound. bf 2012-07-18T04:45:14Z primary amino compound anabolism primary amino compound biosynthesis primary amino compound formation primary amino compound synthesis biological_process GO:1901162 primary amino compound biosynthetic process GO:1901162 The chemical reactions and pathways resulting in the formation of primary amino compound. GOC:TermGenie primary amino compound anabolism GOC:TermGenie primary amino compound biosynthesis GOC:TermGenie primary amino compound formation GOC:TermGenie primary amino compound synthesis GOC:TermGenie Any process that modulates the frequency, rate or extent of trophoblast cell migration. vk 2012-07-19T07:53:06Z biological_process GO:1901163 regulation of trophoblast cell migration GO:1901163 Any process that modulates the frequency, rate or extent of trophoblast cell migration. GOC:BHF GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of trophoblast cell migration. vk 2012-07-19T07:53:28Z down regulation of trophoblast cell migration down-regulation of trophoblast cell migration downregulation of trophoblast cell migration inhibition of trophoblast cell migration biological_process GO:1901164 negative regulation of trophoblast cell migration GO:1901164 Any process that stops, prevents or reduces the frequency, rate or extent of trophoblast cell migration. GOC:BHF GOC:TermGenie down regulation of trophoblast cell migration GOC:TermGenie down-regulation of trophoblast cell migration GOC:TermGenie downregulation of trophoblast cell migration GOC:TermGenie inhibition of trophoblast cell migration GOC:TermGenie Any process that activates or increases the frequency, rate or extent of trophoblast cell migration. vk 2012-07-19T07:53:35Z up regulation of trophoblast cell migration up-regulation of trophoblast cell migration upregulation of trophoblast cell migration activation of trophoblast cell migration biological_process GO:1901165 positive regulation of trophoblast cell migration GO:1901165 Any process that activates or increases the frequency, rate or extent of trophoblast cell migration. GOC:BHF GOC:TermGenie up regulation of trophoblast cell migration GOC:TermGenie up-regulation of trophoblast cell migration GOC:TermGenie upregulation of trophoblast cell migration GOC:TermGenie activation of trophoblast cell migration GOC:TermGenie Any neural crest cell migration that is involved in autonomic nervous system development. vk 2012-07-19T08:39:56Z biological_process GO:1901166 neural crest cell migration involved in autonomic nervous system development GO:1901166 Any neural crest cell migration that is involved in autonomic nervous system development. GOC:BHF GOC:TermGenie Any process that modulates the frequency, rate or extent of formation of translation initiation ternary complex. ss 2012-07-25T02:26:58Z regulation of translation initiation ternary complex assembly biological_process GO:1901190 regulation of formation of translation initiation ternary complex GO:1901190 Any process that modulates the frequency, rate or extent of formation of translation initiation ternary complex. GOC:TermGenie regulation of translation initiation ternary complex assembly GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of formation of translation initiation ternary complex. ss 2012-07-25T02:27:21Z down regulation of formation of translation initiation ternary complex down regulation of translation initiation ternary complex assembly down-regulation of formation of translation initiation ternary complex down-regulation of translation initiation ternary complex assembly downregulation of formation of translation initiation ternary complex downregulation of translation initiation ternary complex assembly inhibition of translation initiation ternary complex assembly negative regulation of translation initiation ternary complex assembly inhibition of formation of translation initiation ternary complex biological_process GO:1901191 negative regulation of formation of translation initiation ternary complex GO:1901191 Any process that stops, prevents or reduces the frequency, rate or extent of formation of translation initiation ternary complex. GOC:TermGenie down regulation of formation of translation initiation ternary complex GOC:TermGenie down regulation of translation initiation ternary complex assembly GOC:TermGenie down-regulation of formation of translation initiation ternary complex GOC:TermGenie down-regulation of translation initiation ternary complex assembly GOC:TermGenie downregulation of formation of translation initiation ternary complex GOC:TermGenie downregulation of translation initiation ternary complex assembly GOC:TermGenie inhibition of translation initiation ternary complex assembly GOC:TermGenie negative regulation of translation initiation ternary complex assembly GOC:TermGenie inhibition of formation of translation initiation ternary complex GOC:TermGenie Any process that activates or increases the frequency, rate or extent of formation of translation initiation ternary complex. ss 2012-07-25T02:27:29Z activation of translation initiation ternary complex assembly positive regulation of translation initiation ternary complex assembly up regulation of formation of translation initiation ternary complex up regulation of translation initiation ternary complex assembly up-regulation of formation of translation initiation ternary complex up-regulation of translation initiation ternary complex assembly upregulation of formation of translation initiation ternary complex upregulation of translation initiation ternary complex assembly activation of formation of translation initiation ternary complex biological_process GO:1901192 positive regulation of formation of translation initiation ternary complex GO:1901192 Any process that activates or increases the frequency, rate or extent of formation of translation initiation ternary complex. GOC:TermGenie activation of translation initiation ternary complex assembly GOC:TermGenie positive regulation of translation initiation ternary complex assembly GOC:TermGenie up regulation of formation of translation initiation ternary complex GOC:TermGenie up regulation of translation initiation ternary complex assembly GOC:TermGenie up-regulation of formation of translation initiation ternary complex GOC:TermGenie up-regulation of translation initiation ternary complex assembly GOC:TermGenie upregulation of formation of translation initiation ternary complex GOC:TermGenie upregulation of translation initiation ternary complex assembly GOC:TermGenie activation of formation of translation initiation ternary complex GOC:TermGenie Any process that modulates the frequency, rate or extent of extracellular matrix assembly. rl 2012-07-27T04:04:00Z biological_process GO:1901201 regulation of extracellular matrix assembly GO:1901201 Any process that modulates the frequency, rate or extent of extracellular matrix assembly. GOC:BHF GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of extracellular matrix assembly. rl 2012-07-27T04:04:24Z down regulation of extracellular matrix assembly down-regulation of extracellular matrix assembly downregulation of extracellular matrix assembly inhibition of extracellular matrix assembly biological_process GO:1901202 negative regulation of extracellular matrix assembly GO:1901202 Any process that stops, prevents or reduces the frequency, rate or extent of extracellular matrix assembly. GOC:BHF GOC:TermGenie down regulation of extracellular matrix assembly GOC:TermGenie down-regulation of extracellular matrix assembly GOC:TermGenie downregulation of extracellular matrix assembly GOC:TermGenie inhibition of extracellular matrix assembly GOC:TermGenie Any process that activates or increases the frequency, rate or extent of extracellular matrix assembly. rl 2012-07-27T04:04:32Z up regulation of extracellular matrix assembly up-regulation of extracellular matrix assembly upregulation of extracellular matrix assembly activation of extracellular matrix assembly biological_process GO:1901203 positive regulation of extracellular matrix assembly GO:1901203 Any process that activates or increases the frequency, rate or extent of extracellular matrix assembly. GOC:BHF GOC:TermGenie up regulation of extracellular matrix assembly GOC:TermGenie up-regulation of extracellular matrix assembly GOC:TermGenie upregulation of extracellular matrix assembly GOC:TermGenie activation of extracellular matrix assembly GOC:TermGenie Any process that modulates the frequency, rate or extent of cardiac chamber formation. rl 2012-07-31T07:18:35Z regulation of heart chamber formation biological_process GO:1901210 regulation of cardiac chamber formation GO:1901210 Any process that modulates the frequency, rate or extent of cardiac chamber formation. GOC:BHF GOC:TermGenie regulation of heart chamber formation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of cardiac chamber formation. rl 2012-07-31T07:18:57Z down regulation of cardiac chamber formation down regulation of heart chamber formation down-regulation of cardiac chamber formation down-regulation of heart chamber formation downregulation of cardiac chamber formation downregulation of heart chamber formation inhibition of heart chamber formation negative regulation of heart chamber formation inhibition of cardiac chamber formation biological_process GO:1901211 negative regulation of cardiac chamber formation GO:1901211 Any process that stops, prevents or reduces the frequency, rate or extent of cardiac chamber formation. GOC:BHF GOC:TermGenie down regulation of cardiac chamber formation GOC:TermGenie down regulation of heart chamber formation GOC:TermGenie down-regulation of cardiac chamber formation GOC:TermGenie down-regulation of heart chamber formation GOC:TermGenie downregulation of cardiac chamber formation GOC:TermGenie downregulation of heart chamber formation GOC:TermGenie inhibition of heart chamber formation GOC:TermGenie negative regulation of heart chamber formation GOC:TermGenie inhibition of cardiac chamber formation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of cardiac chamber formation. rl 2012-07-31T07:19:05Z activation of heart chamber formation positive regulation of heart chamber formation up regulation of cardiac chamber formation up regulation of heart chamber formation up-regulation of cardiac chamber formation up-regulation of heart chamber formation upregulation of cardiac chamber formation upregulation of heart chamber formation activation of cardiac chamber formation biological_process GO:1901212 positive regulation of cardiac chamber formation GO:1901212 Any process that activates or increases the frequency, rate or extent of cardiac chamber formation. GOC:BHF GOC:TermGenie activation of heart chamber formation GOC:TermGenie positive regulation of heart chamber formation GOC:TermGenie up regulation of cardiac chamber formation GOC:TermGenie up regulation of heart chamber formation GOC:TermGenie up-regulation of cardiac chamber formation GOC:TermGenie up-regulation of heart chamber formation GOC:TermGenie upregulation of cardiac chamber formation GOC:TermGenie upregulation of heart chamber formation GOC:TermGenie activation of cardiac chamber formation GOC:TermGenie Any process that modulates the frequency, rate or extent of cardiac chamber morphogenesis. rl 2012-08-06T17:59:11Z regulation of heart chamber morphogenesis biological_process GO:1901219 regulation of cardiac chamber morphogenesis GO:1901219 Any process that modulates the frequency, rate or extent of cardiac chamber morphogenesis. GOC:BHF GOC:TermGenie regulation of heart chamber morphogenesis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of cardiac chamber morphogenesis. rl 2012-08-06T17:59:34Z down regulation of cardiac chamber morphogenesis down regulation of heart chamber morphogenesis down-regulation of cardiac chamber morphogenesis down-regulation of heart chamber morphogenesis downregulation of cardiac chamber morphogenesis downregulation of heart chamber morphogenesis negative regulation of heart chamber morphogenesis inhibition of cardiac chamber morphogenesis inhibition of heart chamber morphogenesis biological_process GO:1901220 negative regulation of cardiac chamber morphogenesis GO:1901220 Any process that stops, prevents or reduces the frequency, rate or extent of cardiac chamber morphogenesis. GOC:BHF GOC:TermGenie down regulation of cardiac chamber morphogenesis GOC:TermGenie down regulation of heart chamber morphogenesis GOC:TermGenie down-regulation of cardiac chamber morphogenesis GOC:TermGenie down-regulation of heart chamber morphogenesis GOC:TermGenie downregulation of cardiac chamber morphogenesis GOC:TermGenie downregulation of heart chamber morphogenesis GOC:TermGenie negative regulation of heart chamber morphogenesis GOC:TermGenie inhibition of cardiac chamber morphogenesis GOC:TermGenie inhibition of heart chamber morphogenesis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of cardiac chamber morphogenesis. rl 2012-08-06T17:59:42Z positive regulation of heart chamber morphogenesis up regulation of cardiac chamber morphogenesis up regulation of heart chamber morphogenesis up-regulation of cardiac chamber morphogenesis up-regulation of heart chamber morphogenesis upregulation of cardiac chamber morphogenesis upregulation of heart chamber morphogenesis activation of cardiac chamber morphogenesis activation of heart chamber morphogenesis biological_process GO:1901221 positive regulation of cardiac chamber morphogenesis GO:1901221 Any process that activates or increases the frequency, rate or extent of cardiac chamber morphogenesis. GOC:BHF GOC:TermGenie positive regulation of heart chamber morphogenesis GOC:TermGenie up regulation of cardiac chamber morphogenesis GOC:TermGenie up regulation of heart chamber morphogenesis GOC:TermGenie up-regulation of cardiac chamber morphogenesis GOC:TermGenie up-regulation of heart chamber morphogenesis GOC:TermGenie upregulation of cardiac chamber morphogenesis GOC:TermGenie upregulation of heart chamber morphogenesis GOC:TermGenie activation of cardiac chamber morphogenesis GOC:TermGenie activation of heart chamber morphogenesis GOC:TermGenie Any process that modulates the frequency, rate or extent of lung ciliated cell differentiation. vk 2012-08-08T08:58:34Z biological_process GO:1901246 regulation of lung ciliated cell differentiation GO:1901246 Any process that modulates the frequency, rate or extent of lung ciliated cell differentiation. GOC:BHF GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of lung ciliated cell differentiation. vk 2012-08-08T08:58:58Z down regulation of lung ciliated cell differentiation down-regulation of lung ciliated cell differentiation downregulation of lung ciliated cell differentiation inhibition of lung ciliated cell differentiation biological_process GO:1901247 negative regulation of lung ciliated cell differentiation GO:1901247 Any process that stops, prevents or reduces the frequency, rate or extent of lung ciliated cell differentiation. GOC:BHF GOC:TermGenie down regulation of lung ciliated cell differentiation GOC:TermGenie down-regulation of lung ciliated cell differentiation GOC:TermGenie downregulation of lung ciliated cell differentiation GOC:TermGenie inhibition of lung ciliated cell differentiation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of lung ciliated cell differentiation. vk 2012-08-08T08:59:05Z up regulation of lung ciliated cell differentiation up-regulation of lung ciliated cell differentiation upregulation of lung ciliated cell differentiation activation of lung ciliated cell differentiation biological_process GO:1901248 positive regulation of lung ciliated cell differentiation GO:1901248 Any process that activates or increases the frequency, rate or extent of lung ciliated cell differentiation. GOC:BHF GOC:TermGenie up regulation of lung ciliated cell differentiation GOC:TermGenie up-regulation of lung ciliated cell differentiation GOC:TermGenie upregulation of lung ciliated cell differentiation GOC:TermGenie activation of lung ciliated cell differentiation GOC:TermGenie The directed movement of a carbohydrate derivative into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. bf 2012-08-16T14:51:22Z biological_process GO:1901264 carbohydrate derivative transport GO:1901264 The directed movement of a carbohydrate derivative into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:TermGenie GOC:bf GOC:jl Any process that modulates the frequency, rate or extent of vasculature development. bf 2012-09-06T09:16:15Z biological_process regulation of vascular system development GO:1901342 regulation of vasculature development GO:1901342 Any process that modulates the frequency, rate or extent of vasculature development. GOC:TermGenie regulation of vascular system development GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of vasculature development. bf 2012-09-06T09:17:24Z down regulation of vasculature development down-regulation of vasculature development downregulation of vasculature development inhibition of vasculature development biological_process down regulation of vascular system development down-regulation of vascular system development downregulation of vascular system development inhibition of vascular system development negative regulation of vascular system development GO:1901343 negative regulation of vasculature development GO:1901343 Any process that stops, prevents or reduces the frequency, rate or extent of vasculature development. GOC:TermGenie down regulation of vasculature development GOC:TermGenie down-regulation of vasculature development GOC:TermGenie downregulation of vasculature development GOC:TermGenie inhibition of vasculature development GOC:TermGenie down regulation of vascular system development GOC:TermGenie down-regulation of vascular system development GOC:TermGenie downregulation of vascular system development GOC:TermGenie inhibition of vascular system development GOC:TermGenie negative regulation of vascular system development GOC:TermGenie The directed movement of an acetate ester into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. bf 2012-09-28T10:42:13Z biological_process GO:1901374 acetate ester transport GO:1901374 The directed movement of an acetate ester into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. GOC:TermGenie Any process that modulates the frequency, rate or extent of response to acetate. tt 2012-10-02T14:25:06Z biological_process GO:1901457 regulation of response to acetate GO:1901457 Any process that modulates the frequency, rate or extent of response to acetate. GOC:TermGenie GOC:mengo_curators Any process that stops, prevents or reduces the frequency, rate or extent of response to acetate. tt 2012-10-02T14:26:15Z down regulation of response to acetate down-regulation of response to acetate downregulation of response to acetate inhibition of response to acetate biological_process GO:1901458 negative regulation of response to acetate GO:1901458 Any process that stops, prevents or reduces the frequency, rate or extent of response to acetate. GOC:TermGenie GOC:mengo_curators down regulation of response to acetate GOC:TermGenie down-regulation of response to acetate GOC:TermGenie downregulation of response to acetate GOC:TermGenie inhibition of response to acetate GOC:TermGenie Any process that activates or increases the frequency, rate or extent of response to acetate. tt 2012-10-02T14:26:34Z up regulation of response to acetate up-regulation of response to acetate upregulation of response to acetate activation of response to acetate biological_process GO:1901459 positive regulation of response to acetate GO:1901459 Any process that activates or increases the frequency, rate or extent of response to acetate. GOC:TermGenie GOC:mengo_curators up regulation of response to acetate GOC:TermGenie up-regulation of response to acetate GOC:TermGenie upregulation of response to acetate GOC:TermGenie activation of response to acetate GOC:TermGenie Any process that modulates the frequency, rate or extent of endothelial tube morphogenesis. dph 2012-10-17T14:30:40Z biological_process GO:1901509 regulation of endothelial tube morphogenesis GO:1901509 Any process that modulates the frequency, rate or extent of endothelial tube morphogenesis. GOC:TermGenie GOC:dph Any process that modulates the frequency, rate or extent of hematopoietic progenitor cell differentiation. vk 2012-10-24T11:23:01Z regulation of haematopoietic progenitor cell differentiation regulation of haemopoietic progenitor cell differentiation regulation of hemopoietic progenitor cell differentiation biological_process GO:1901532 regulation of hematopoietic progenitor cell differentiation GO:1901532 Any process that modulates the frequency, rate or extent of hematopoietic progenitor cell differentiation. GOC:BHF GOC:TermGenie GOC:rl regulation of haematopoietic progenitor cell differentiation GOC:TermGenie regulation of haemopoietic progenitor cell differentiation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic progenitor cell differentiation. vk 2012-10-24T11:23:06Z down regulation of haematopoietic progenitor cell differentiation down regulation of haemopoietic progenitor cell differentiation down regulation of hemopoietic progenitor cell differentiation down-regulation of haematopoietic progenitor cell differentiation down-regulation of haemopoietic progenitor cell differentiation down-regulation of hemopoietic progenitor cell differentiation downregulation of haematopoietic progenitor cell differentiation downregulation of haemopoietic progenitor cell differentiation downregulation of hemopoietic progenitor cell differentiation inhibition of haematopoietic progenitor cell differentiation inhibition of haemopoietic progenitor cell differentiation negative regulation of haematopoietic progenitor cell differentiation negative regulation of haemopoietic progenitor cell differentiation negative regulation of hemopoietic progenitor cell differentiation inhibition of hemopoietic progenitor cell differentiation biological_process down regulation of hematopoietic progenitor cell differentiation down-regulation of hematopoietic progenitor cell differentiation downregulation of hematopoietic progenitor cell differentiation inhibition of hematopoietic progenitor cell differentiation GO:1901533 negative regulation of hematopoietic progenitor cell differentiation GO:1901533 Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic progenitor cell differentiation. GOC:BHF GOC:TermGenie GOC:rl down regulation of haematopoietic progenitor cell differentiation GOC:TermGenie down regulation of haemopoietic progenitor cell differentiation GOC:TermGenie down regulation of hemopoietic progenitor cell differentiation GOC:TermGenie down-regulation of haematopoietic progenitor cell differentiation GOC:TermGenie down-regulation of haemopoietic progenitor cell differentiation GOC:TermGenie down-regulation of hemopoietic progenitor cell differentiation GOC:TermGenie downregulation of haematopoietic progenitor cell differentiation GOC:TermGenie downregulation of haemopoietic progenitor cell differentiation GOC:TermGenie downregulation of hemopoietic progenitor cell differentiation GOC:TermGenie inhibition of haematopoietic progenitor cell differentiation GOC:TermGenie inhibition of haemopoietic progenitor cell differentiation GOC:TermGenie negative regulation of haematopoietic progenitor cell differentiation GOC:TermGenie negative regulation of haemopoietic progenitor cell differentiation GOC:TermGenie inhibition of hemopoietic progenitor cell differentiation GOC:TermGenie down regulation of hematopoietic progenitor cell differentiation GOC:TermGenie down-regulation of hematopoietic progenitor cell differentiation GOC:TermGenie downregulation of hematopoietic progenitor cell differentiation GOC:TermGenie inhibition of hematopoietic progenitor cell differentiation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of hematopoietic progenitor cell differentiation. vk 2012-10-24T11:23:14Z activation of haematopoietic progenitor cell differentiation activation of haemopoietic progenitor cell differentiation positive regulation of haematopoietic progenitor cell differentiation positive regulation of haemopoietic progenitor cell differentiation positive regulation of hemopoietic progenitor cell differentiation up regulation of haematopoietic progenitor cell differentiation up regulation of haemopoietic progenitor cell differentiation up regulation of hemopoietic progenitor cell differentiation up-regulation of haematopoietic progenitor cell differentiation up-regulation of haemopoietic progenitor cell differentiation up-regulation of hemopoietic progenitor cell differentiation upregulation of haematopoietic progenitor cell differentiation upregulation of haemopoietic progenitor cell differentiation upregulation of hemopoietic progenitor cell differentiation activation of hemopoietic progenitor cell differentiation biological_process activation of hematopoietic progenitor cell differentiation up regulation of hematopoietic progenitor cell differentiation up-regulation of hematopoietic progenitor cell differentiation upregulation of hematopoietic progenitor cell differentiation GO:1901534 positive regulation of hematopoietic progenitor cell differentiation GO:1901534 Any process that activates or increases the frequency, rate or extent of hematopoietic progenitor cell differentiation. GOC:BHF GOC:TermGenie GOC:rl activation of haematopoietic progenitor cell differentiation GOC:TermGenie activation of haemopoietic progenitor cell differentiation GOC:TermGenie positive regulation of haematopoietic progenitor cell differentiation GOC:TermGenie positive regulation of haemopoietic progenitor cell differentiation GOC:TermGenie up regulation of haematopoietic progenitor cell differentiation GOC:TermGenie up regulation of haemopoietic progenitor cell differentiation GOC:TermGenie up regulation of hemopoietic progenitor cell differentiation GOC:TermGenie up-regulation of haematopoietic progenitor cell differentiation GOC:TermGenie up-regulation of haemopoietic progenitor cell differentiation GOC:TermGenie up-regulation of hemopoietic progenitor cell differentiation GOC:TermGenie upregulation of haematopoietic progenitor cell differentiation GOC:TermGenie upregulation of haemopoietic progenitor cell differentiation GOC:TermGenie upregulation of hemopoietic progenitor cell differentiation GOC:TermGenie activation of hemopoietic progenitor cell differentiation GOC:TermGenie activation of hematopoietic progenitor cell differentiation GOC:TermGenie up regulation of hematopoietic progenitor cell differentiation GOC:TermGenie up-regulation of hematopoietic progenitor cell differentiation GOC:TermGenie upregulation of hematopoietic progenitor cell differentiation GOC:TermGenie Any process that modulates the frequency, rate or extent of endothelial cell development. pr 2012-10-30T12:59:50Z biological_process GO:1901550 regulation of endothelial cell development GO:1901550 Any process that modulates the frequency, rate or extent of endothelial cell development. GOC:TermGenie GOC:pr PMID:19470579 Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell development. pr 2012-10-30T12:59:54Z down regulation of endothelial cell development down-regulation of endothelial cell development downregulation of endothelial cell development inhibition of endothelial cell development biological_process GO:1901551 negative regulation of endothelial cell development GO:1901551 Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell development. GOC:TermGenie GOC:pr PMID:19470579 down regulation of endothelial cell development GOC:TermGenie down-regulation of endothelial cell development GOC:TermGenie downregulation of endothelial cell development GOC:TermGenie inhibition of endothelial cell development GOC:TermGenie Any process that activates or increases the frequency, rate or extent of endothelial cell development. pr 2012-10-30T12:59:58Z up regulation of endothelial cell development up-regulation of endothelial cell development upregulation of endothelial cell development activation of endothelial cell development biological_process GO:1901552 positive regulation of endothelial cell development GO:1901552 Any process that activates or increases the frequency, rate or extent of endothelial cell development. GOC:TermGenie GOC:pr PMID:19470579 up regulation of endothelial cell development GOC:TermGenie up-regulation of endothelial cell development GOC:TermGenie upregulation of endothelial cell development GOC:TermGenie activation of endothelial cell development GOC:TermGenie Any microtubule in a dendrite, a neuron projection. pr 2012-11-07T14:37:30Z NIF_Subcellular:sao110773650 microtubule of dendrite microtubulus of dendrite cellular_component GO:1901588 dendritic microtubule GO:1901588 Any microtubule in a dendrite, a neuron projection. GOC:TermGenie NIF_Subcellular:sao110773650 microtubule of dendrite GOC:TermGenie microtubulus of dendrite GOC:TermGenie An arrangement of closely apposed microtubules running parallel to each other in the axon hillock and initial segment. pr 2012-11-07T15:37:12Z NIF_Subcellular:sao707332678 axon microtubule fascicle microtubule bundle of axon microtubule fascicle of axon cellular_component GO:1901589 axon microtubule bundle GO:1901589 An arrangement of closely apposed microtubules running parallel to each other in the axon hillock and initial segment. GOC:TermGenie NIF_Subcellular:sao707332678 microtubule bundle of axon GOC:TermGenie microtubule fascicle of axon GOC:TermGenie The chemical reactions and pathways involving an alpha-amino acid. tb 2012-11-08T17:39:50Z alpha-amino acid metabolism biological_process GO:1901605 alpha-amino acid metabolic process GO:1901605 The chemical reactions and pathways involving an alpha-amino acid. GOC:TermGenie alpha-amino acid metabolism GOC:TermGenie The chemical reactions and pathways resulting in the formation of an alpha-amino acid. tb 2012-11-08T17:39:58Z alpha-amino acid anabolism alpha-amino acid biosynthesis alpha-amino acid formation alpha-amino acid synthesis biological_process GO:1901607 alpha-amino acid biosynthetic process GO:1901607 The chemical reactions and pathways resulting in the formation of an alpha-amino acid. GOC:TermGenie alpha-amino acid anabolism GOC:TermGenie alpha-amino acid biosynthesis GOC:TermGenie alpha-amino acid formation GOC:TermGenie alpha-amino acid synthesis GOC:TermGenie Any process that modulates the frequency, rate or extent of vesicle transport along microtubule. hjd 2012-11-08T21:49:44Z regulation of microtubule-based vesicle localization biological_process GO:1901608 regulation of vesicle transport along microtubule GO:1901608 Any process that modulates the frequency, rate or extent of vesicle transport along microtubule. GOC:TermGenie regulation of microtubule-based vesicle localization GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of vesicle transport along microtubule. hjd 2012-11-08T21:49:48Z down regulation of microtubule-based vesicle localization down regulation of vesicle transport along microtubule down-regulation of microtubule-based vesicle localization down-regulation of vesicle transport along microtubule downregulation of microtubule-based vesicle localization downregulation of vesicle transport along microtubule inhibition of microtubule-based vesicle localization negative regulation of microtubule-based vesicle localization inhibition of vesicle transport along microtubule biological_process GO:1901609 negative regulation of vesicle transport along microtubule GO:1901609 Any process that stops, prevents or reduces the frequency, rate or extent of vesicle transport along microtubule. GOC:TermGenie down regulation of microtubule-based vesicle localization GOC:TermGenie down regulation of vesicle transport along microtubule GOC:TermGenie down-regulation of microtubule-based vesicle localization GOC:TermGenie down-regulation of vesicle transport along microtubule GOC:TermGenie downregulation of microtubule-based vesicle localization GOC:TermGenie downregulation of vesicle transport along microtubule GOC:TermGenie inhibition of microtubule-based vesicle localization GOC:TermGenie negative regulation of microtubule-based vesicle localization GOC:TermGenie inhibition of vesicle transport along microtubule GOC:TermGenie Any process that activates or increases the frequency, rate or extent of vesicle transport along microtubule. hjd 2012-11-08T21:49:53Z activation of microtubule-based vesicle localization positive regulation of microtubule-based vesicle localization up regulation of microtubule-based vesicle localization up regulation of vesicle transport along microtubule up-regulation of microtubule-based vesicle localization up-regulation of vesicle transport along microtubule upregulation of microtubule-based vesicle localization upregulation of vesicle transport along microtubule activation of vesicle transport along microtubule biological_process GO:1901610 positive regulation of vesicle transport along microtubule GO:1901610 Any process that activates or increases the frequency, rate or extent of vesicle transport along microtubule. GOC:TermGenie activation of microtubule-based vesicle localization GOC:TermGenie positive regulation of microtubule-based vesicle localization GOC:TermGenie up regulation of microtubule-based vesicle localization GOC:TermGenie up regulation of vesicle transport along microtubule GOC:TermGenie up-regulation of microtubule-based vesicle localization GOC:TermGenie up-regulation of vesicle transport along microtubule GOC:TermGenie upregulation of microtubule-based vesicle localization GOC:TermGenie upregulation of vesicle transport along microtubule GOC:TermGenie activation of vesicle transport along microtubule GOC:TermGenie Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide stimulus. pr 2012-11-20T09:45:15Z biological_process GO:1901652 response to peptide GO:1901652 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide stimulus. GOC:TermGenie GOC:pr Any process that modulates the frequency, rate or extent of compound eye retinal cell apoptotic process. pr 2012-12-12T10:28:35Z biological_process GO:1901692 regulation of compound eye retinal cell apoptotic process GO:1901692 Any process that modulates the frequency, rate or extent of compound eye retinal cell apoptotic process. GOC:TermGenie GOC:mtg_apoptosis PMID:12021768 Any process that stops, prevents or reduces the frequency, rate or extent of compound eye retinal cell apoptotic process. pr 2012-12-12T10:28:40Z down regulation of compound eye retinal cell apoptotic process down-regulation of compound eye retinal cell apoptotic process downregulation of compound eye retinal cell apoptotic process inhibition of compound eye retinal cell apoptotic process biological_process GO:1901693 negative regulation of compound eye retinal cell apoptotic process GO:1901693 Any process that stops, prevents or reduces the frequency, rate or extent of compound eye retinal cell apoptotic process. GOC:TermGenie GOC:mtg_apoptosis PMID:12021768 down regulation of compound eye retinal cell apoptotic process GOC:TermGenie down-regulation of compound eye retinal cell apoptotic process GOC:TermGenie downregulation of compound eye retinal cell apoptotic process GOC:TermGenie inhibition of compound eye retinal cell apoptotic process GOC:TermGenie Any process that activates or increases the frequency, rate or extent of compound eye retinal cell apoptotic process. pr 2012-12-12T10:28:45Z GO:0046675 up regulation of compound eye retinal cell apoptotic process up-regulation of compound eye retinal cell apoptotic process upregulation of compound eye retinal cell apoptotic process activation of compound eye retinal cell apoptotic process biological_process induction of compound eye retinal cell programmed cell death GO:1901694 positive regulation of compound eye retinal cell apoptotic process GO:1901694 Any process that activates or increases the frequency, rate or extent of compound eye retinal cell apoptotic process. GOC:TermGenie GOC:mtg_apoptosis PMID:12021768 up regulation of compound eye retinal cell apoptotic process GOC:TermGenie up-regulation of compound eye retinal cell apoptotic process GOC:TermGenie upregulation of compound eye retinal cell apoptotic process GOC:TermGenie activation of compound eye retinal cell apoptotic process GOC:TermGenie Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen compound stimulus. pr 2012-12-13T15:06:08Z response to nitrogen molecular entity biological_process GO:1901698 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. response to nitrogen compound GO:1901698 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen compound stimulus. GOC:TermGenie GOC:pr Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen-containing compound stimulus. pr 2012-12-13T15:11:37Z response to oxygen molecular entity biological_process GO:1901700 Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. response to oxygen-containing compound GO:1901700 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen-containing compound stimulus. GOC:TermGenie GOC:pr The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of bone as it progresses from its formation to the mature state. hjd 2012-12-14T16:04:16Z biological_process GO:1901706 mesenchymal cell differentiation involved in bone development GO:1901706 The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of bone as it progresses from its formation to the mature state. GOC:TermGenie GOC:hjd PMID:21571217 Any process that modulates the frequency, rate or extent of muscle tissue development. yaf 2013-02-01T10:30:47Z biological_process GO:1901861 regulation of muscle tissue development GO:1901861 Any process that modulates the frequency, rate or extent of muscle tissue development. GOC:TermGenie GOC:yaf PMID:23150719 Any process that stops, prevents or reduces the frequency, rate or extent of muscle tissue development. yaf 2013-02-01T10:30:52Z down regulation of muscle tissue development down-regulation of muscle tissue development downregulation of muscle tissue development inhibition of muscle tissue development biological_process GO:1901862 negative regulation of muscle tissue development GO:1901862 Any process that stops, prevents or reduces the frequency, rate or extent of muscle tissue development. GOC:TermGenie GOC:yaf PMID:23150719 down regulation of muscle tissue development GOC:TermGenie down-regulation of muscle tissue development GOC:TermGenie downregulation of muscle tissue development GOC:TermGenie inhibition of muscle tissue development GOC:TermGenie Any process that activates or increases the frequency, rate or extent of muscle tissue development. yaf 2013-02-01T10:30:57Z up regulation of muscle tissue development up-regulation of muscle tissue development upregulation of muscle tissue development activation of muscle tissue development biological_process GO:1901863 positive regulation of muscle tissue development GO:1901863 Any process that activates or increases the frequency, rate or extent of muscle tissue development. GOC:TermGenie GOC:yaf PMID:23150719 up regulation of muscle tissue development GOC:TermGenie up-regulation of muscle tissue development GOC:TermGenie upregulation of muscle tissue development GOC:TermGenie activation of muscle tissue development GOC:TermGenie Any process that modulates the frequency, rate or extent of protein depolymerization. rl 2013-02-06T13:57:23Z regulation of protein polymer breakdown regulation of protein polymer catabolic process regulation of protein polymer catabolism regulation of protein polymer degradation biological_process GO:1901879 regulation of protein depolymerization GO:1901879 Any process that modulates the frequency, rate or extent of protein depolymerization. GOC:BHF GOC:TermGenie GOC:rl PMID:12032137 regulation of protein polymer breakdown GOC:TermGenie regulation of protein polymer catabolic process GOC:TermGenie regulation of protein polymer catabolism GOC:TermGenie regulation of protein polymer degradation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of protein depolymerization. rl 2013-02-06T13:57:28Z down regulation of protein depolymerization down regulation of protein polymer breakdown down regulation of protein polymer catabolic process down regulation of protein polymer catabolism down regulation of protein polymer degradation down-regulation of protein depolymerization down-regulation of protein polymer breakdown down-regulation of protein polymer catabolic process down-regulation of protein polymer catabolism down-regulation of protein polymer degradation downregulation of protein depolymerization downregulation of protein polymer breakdown downregulation of protein polymer catabolic process downregulation of protein polymer catabolism downregulation of protein polymer degradation inhibition of protein polymer breakdown inhibition of protein polymer catabolic process inhibition of protein polymer catabolism inhibition of protein polymer degradation negative regulation of protein polymer breakdown negative regulation of protein polymer catabolic process negative regulation of protein polymer catabolism negative regulation of protein polymer degradation inhibition of protein depolymerization biological_process GO:1901880 negative regulation of protein depolymerization GO:1901880 Any process that stops, prevents or reduces the frequency, rate or extent of protein depolymerization. GOC:BHF GOC:TermGenie GOC:rl PMID:12032137 down regulation of protein depolymerization GOC:TermGenie down regulation of protein polymer breakdown GOC:TermGenie down regulation of protein polymer catabolic process GOC:TermGenie down regulation of protein polymer catabolism GOC:TermGenie down regulation of protein polymer degradation GOC:TermGenie down-regulation of protein depolymerization GOC:TermGenie down-regulation of protein polymer breakdown GOC:TermGenie down-regulation of protein polymer catabolic process GOC:TermGenie down-regulation of protein polymer catabolism GOC:TermGenie down-regulation of protein polymer degradation GOC:TermGenie downregulation of protein depolymerization GOC:TermGenie downregulation of protein polymer breakdown GOC:TermGenie downregulation of protein polymer catabolic process GOC:TermGenie downregulation of protein polymer catabolism GOC:TermGenie downregulation of protein polymer degradation GOC:TermGenie inhibition of protein polymer breakdown GOC:TermGenie inhibition of protein polymer catabolic process GOC:TermGenie inhibition of protein polymer catabolism GOC:TermGenie inhibition of protein polymer degradation GOC:TermGenie negative regulation of protein polymer breakdown GOC:TermGenie negative regulation of protein polymer catabolic process GOC:TermGenie negative regulation of protein polymer catabolism GOC:TermGenie negative regulation of protein polymer degradation GOC:TermGenie inhibition of protein depolymerization GOC:TermGenie Any process that activates or increases the frequency, rate or extent of protein depolymerization. rl 2013-02-06T13:57:32Z activation of protein polymer breakdown activation of protein polymer catabolic process activation of protein polymer catabolism activation of protein polymer degradation positive regulation of protein polymer breakdown positive regulation of protein polymer catabolic process positive regulation of protein polymer catabolism positive regulation of protein polymer degradation up regulation of protein depolymerization up regulation of protein polymer breakdown up regulation of protein polymer catabolic process up regulation of protein polymer catabolism up regulation of protein polymer degradation up-regulation of protein depolymerization up-regulation of protein polymer breakdown up-regulation of protein polymer catabolic process up-regulation of protein polymer catabolism up-regulation of protein polymer degradation upregulation of protein depolymerization upregulation of protein polymer breakdown upregulation of protein polymer catabolic process upregulation of protein polymer catabolism upregulation of protein polymer degradation activation of protein depolymerization biological_process GO:1901881 positive regulation of protein depolymerization GO:1901881 Any process that activates or increases the frequency, rate or extent of protein depolymerization. GOC:BHF GOC:TermGenie GOC:rl PMID:12032137 activation of protein polymer breakdown GOC:TermGenie activation of protein polymer catabolic process GOC:TermGenie activation of protein polymer catabolism GOC:TermGenie activation of protein polymer degradation GOC:TermGenie positive regulation of protein polymer breakdown GOC:TermGenie positive regulation of protein polymer catabolic process GOC:TermGenie positive regulation of protein polymer catabolism GOC:TermGenie positive regulation of protein polymer degradation GOC:TermGenie up regulation of protein depolymerization GOC:TermGenie up regulation of protein polymer breakdown GOC:TermGenie up regulation of protein polymer catabolic process GOC:TermGenie up regulation of protein polymer catabolism GOC:TermGenie up regulation of protein polymer degradation GOC:TermGenie up-regulation of protein depolymerization GOC:TermGenie up-regulation of protein polymer breakdown GOC:TermGenie up-regulation of protein polymer catabolic process GOC:TermGenie up-regulation of protein polymer catabolism GOC:TermGenie up-regulation of protein polymer degradation GOC:TermGenie upregulation of protein depolymerization GOC:TermGenie upregulation of protein polymer breakdown GOC:TermGenie upregulation of protein polymer catabolic process GOC:TermGenie upregulation of protein polymer catabolism GOC:TermGenie upregulation of protein polymer degradation GOC:TermGenie activation of protein depolymerization GOC:TermGenie Any process that modulates the frequency, rate or extent of cell junction assembly. tb 2013-02-06T19:40:32Z biological_process GO:1901888 regulation of cell junction assembly GO:1901888 Any process that modulates the frequency, rate or extent of cell junction assembly. GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of cell junction assembly. tb 2013-02-06T19:40:41Z down regulation of cell junction assembly down-regulation of cell junction assembly downregulation of cell junction assembly inhibition of cell junction assembly biological_process GO:1901889 negative regulation of cell junction assembly GO:1901889 Any process that stops, prevents or reduces the frequency, rate or extent of cell junction assembly. GOC:TermGenie down regulation of cell junction assembly GOC:TermGenie down-regulation of cell junction assembly GOC:TermGenie downregulation of cell junction assembly GOC:TermGenie inhibition of cell junction assembly GOC:TermGenie Any process that activates or increases the frequency, rate or extent of cell junction assembly. tb 2013-02-06T19:40:46Z up regulation of cell junction assembly up-regulation of cell junction assembly upregulation of cell junction assembly activation of cell junction assembly biological_process GO:1901890 positive regulation of cell junction assembly GO:1901890 Any process that activates or increases the frequency, rate or extent of cell junction assembly. GOC:TermGenie up regulation of cell junction assembly GOC:TermGenie up-regulation of cell junction assembly GOC:TermGenie upregulation of cell junction assembly GOC:TermGenie activation of cell junction assembly GOC:TermGenie The directed movement a dense core granule within a cell. pr 2013-02-19T13:00:52Z dense core vesicle transport biological_process GO:1901950 goslim_synapse dense core granule transport GO:1901950 The directed movement a dense core granule within a cell. GOC:TermGenie GOC:kmv PMID:23358451 dense core vesicle transport GOC:TermGenie Any process that modulates the frequency, rate or extent of anterograde dense core granule transport. pr 2013-02-19T13:36:21Z biological_process GO:1901951 regulation of anterograde dense core granule transport GO:1901951 Any process that modulates the frequency, rate or extent of anterograde dense core granule transport. GOC:TermGenie GOC:kmv PMID:23358451 Any process that stops, prevents or reduces the frequency, rate or extent of anterograde dense core granule transport. pr 2013-02-19T13:36:30Z down regulation of anterograde dense core granule transport down-regulation of anterograde dense core granule transport downregulation of anterograde dense core granule transport inhibition of anterograde dense core granule transport biological_process GO:1901952 negative regulation of anterograde dense core granule transport GO:1901952 Any process that stops, prevents or reduces the frequency, rate or extent of anterograde dense core granule transport. GOC:TermGenie GOC:kmv PMID:23358451 down regulation of anterograde dense core granule transport GOC:TermGenie down-regulation of anterograde dense core granule transport GOC:TermGenie downregulation of anterograde dense core granule transport GOC:TermGenie inhibition of anterograde dense core granule transport GOC:TermGenie Any process that activates or increases the frequency, rate or extent of anterograde dense core granule transport. pr 2013-02-19T13:36:35Z up regulation of anterograde dense core granule transport up-regulation of anterograde dense core granule transport upregulation of anterograde dense core granule transport activation of anterograde dense core granule transport biological_process GO:1901953 positive regulation of anterograde dense core granule transport GO:1901953 Any process that activates or increases the frequency, rate or extent of anterograde dense core granule transport. GOC:TermGenie GOC:kmv PMID:23358451 up regulation of anterograde dense core granule transport GOC:TermGenie up-regulation of anterograde dense core granule transport GOC:TermGenie upregulation of anterograde dense core granule transport GOC:TermGenie activation of anterograde dense core granule transport GOC:TermGenie Any process that modulates the frequency, rate or extent of retrograde dense core granule transport. pr 2013-02-19T13:36:43Z biological_process GO:1901954 regulation of retrograde dense core granule transport GO:1901954 Any process that modulates the frequency, rate or extent of retrograde dense core granule transport. GOC:TermGenie GOC:kmv PMID:23358451 Any process that stops, prevents or reduces the frequency, rate or extent of retrograde dense core granule transport. pr 2013-02-19T13:36:47Z down regulation of retrograde dense core granule transport down-regulation of retrograde dense core granule transport downregulation of retrograde dense core granule transport inhibition of retrograde dense core granule transport biological_process GO:1901955 negative regulation of retrograde dense core granule transport GO:1901955 Any process that stops, prevents or reduces the frequency, rate or extent of retrograde dense core granule transport. GOC:TermGenie GOC:kmv PMID:23358451 down regulation of retrograde dense core granule transport GOC:TermGenie down-regulation of retrograde dense core granule transport GOC:TermGenie downregulation of retrograde dense core granule transport GOC:TermGenie inhibition of retrograde dense core granule transport GOC:TermGenie Any process that activates or increases the frequency, rate or extent of retrograde dense core granule transport. pr 2013-02-19T13:36:52Z up regulation of retrograde dense core granule transport up-regulation of retrograde dense core granule transport upregulation of retrograde dense core granule transport activation of retrograde dense core granule transport biological_process GO:1901956 positive regulation of retrograde dense core granule transport GO:1901956 Any process that activates or increases the frequency, rate or extent of retrograde dense core granule transport. GOC:TermGenie GOC:kmv PMID:23358451 up regulation of retrograde dense core granule transport GOC:TermGenie up-regulation of retrograde dense core granule transport GOC:TermGenie upregulation of retrograde dense core granule transport GOC:TermGenie activation of retrograde dense core granule transport GOC:TermGenie Any process that modulates the frequency, rate or extent of cell proliferation involved in outflow tract morphogenesis. dph 2013-02-20T20:30:26Z biological_process GO:1901963 regulation of cell proliferation involved in outflow tract morphogenesis GO:1901963 Any process that modulates the frequency, rate or extent of cell proliferation involved in outflow tract morphogenesis. GOC:TermGenie GOC:dph GOC:mtg_heart PMID:21419760 Any process that activates or increases the frequency, rate or extent of cell proliferation involved in outflow tract morphogenesis. dph 2013-02-20T20:30:31Z up regulation of cell proliferation involved in outflow tract morphogenesis up-regulation of cell proliferation involved in outflow tract morphogenesis upregulation of cell proliferation involved in outflow tract morphogenesis activation of cell proliferation involved in outflow tract morphogenesis biological_process GO:1901964 positive regulation of cell proliferation involved in outflow tract morphogenesis GO:1901964 Any process that activates or increases the frequency, rate or extent of cell proliferation involved in outflow tract morphogenesis. GOC:TermGenie GOC:dph GOC:mtg_heart PMID:21419760 up regulation of cell proliferation involved in outflow tract morphogenesis GOC:TermGenie up-regulation of cell proliferation involved in outflow tract morphogenesis GOC:TermGenie upregulation of cell proliferation involved in outflow tract morphogenesis GOC:TermGenie activation of cell proliferation involved in outflow tract morphogenesis GOC:TermGenie Any process that modulates the frequency, rate or extent of cilium assembly. dph 2013-03-26T18:10:51Z regulation of ciliogenesis biological_process regulation of cilium biogenesis GO:1902017 regulation of cilium assembly GO:1902017 Any process that modulates the frequency, rate or extent of cilium assembly. GOC:TermGenie GOC:cilia GOC:dph PMID:17719545 regulation of ciliogenesis GOC:TermGenie regulation of cilium biogenesis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of cilium assembly. dph 2013-03-26T18:10:56Z down regulation of ciliogenesis down regulation of cilium assembly down-regulation of ciliogenesis down-regulation of cilium assembly downregulation of ciliogenesis downregulation of cilium assembly inhibition of ciliogenesis negative regulation of ciliogenesis inhibition of cilium assembly biological_process down regulation of cilium biogenesis down-regulation of cilium biogenesis downregulation of cilium biogenesis inhibition of cilium biogenesis negative regulation of cilium biogenesis GO:1902018 negative regulation of cilium assembly GO:1902018 Any process that stops, prevents or reduces the frequency, rate or extent of cilium assembly. GOC:TermGenie GOC:cilia GOC:dph PMID:17719545 down regulation of ciliogenesis GOC:TermGenie down regulation of cilium assembly GOC:TermGenie down-regulation of ciliogenesis GOC:TermGenie down-regulation of cilium assembly GOC:TermGenie downregulation of ciliogenesis GOC:TermGenie downregulation of cilium assembly GOC:TermGenie inhibition of ciliogenesis GOC:TermGenie negative regulation of ciliogenesis GOC:TermGenie inhibition of cilium assembly GOC:TermGenie down regulation of cilium biogenesis GOC:TermGenie down-regulation of cilium biogenesis GOC:TermGenie downregulation of cilium biogenesis GOC:TermGenie inhibition of cilium biogenesis GOC:TermGenie negative regulation of cilium biogenesis GOC:TermGenie Any process that modulates the frequency, rate or extent of cilium-dependent cell motility. jl 2013-03-27T14:42:38Z regulation of cilium cell motility biological_process regulation of ciliary cell motility GO:1902019 regulation of cilium-dependent cell motility GO:1902019 Any process that modulates the frequency, rate or extent of cilium-dependent cell motility. GOC:TermGenie GOC:cilia GOC:jl Any process that stops, prevents or reduces the frequency, rate or extent of cilium-dependent cell motility. jl 2013-03-27T14:42:42Z down regulation of ciliary cell motility down-regulation of ciliary cell motility downregulation of ciliary cell motility negative regulation of cilium cell motility inhibition of ciliary cell motility biological_process negative regulation of ciliary cell motility GO:1902020 negative regulation of cilium-dependent cell motility GO:1902020 Any process that stops, prevents or reduces the frequency, rate or extent of cilium-dependent cell motility. GOC:TermGenie GOC:cilia GOC:jl down regulation of ciliary cell motility GOC:TermGenie down-regulation of ciliary cell motility GOC:TermGenie downregulation of ciliary cell motility GOC:TermGenie inhibition of ciliary cell motility GOC:TermGenie Any process that modulates the frequency, rate or extent of hematopoietic stem cell proliferation. ss 2013-04-02T05:13:19Z regulation of hemopoietic stem cell proliferation biological_process GO:1902033 regulation of hematopoietic stem cell proliferation GO:1902033 Any process that modulates the frequency, rate or extent of hematopoietic stem cell proliferation. GOC:TermGenie PMID:23403623 regulation of hemopoietic stem cell proliferation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic stem cell proliferation. ss 2013-04-02T05:13:24Z down regulation of hematopoietic stem cell proliferation down regulation of hemopoietic stem cell proliferation down-regulation of hematopoietic stem cell proliferation down-regulation of hemopoietic stem cell proliferation downregulation of hematopoietic stem cell proliferation downregulation of hemopoietic stem cell proliferation negative regulation of hemopoietic stem cell proliferation inhibition of hematopoietic stem cell proliferation inhibition of hemopoietic stem cell proliferation biological_process GO:1902034 negative regulation of hematopoietic stem cell proliferation GO:1902034 Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic stem cell proliferation. GOC:TermGenie PMID:23403623 down regulation of hematopoietic stem cell proliferation GOC:TermGenie down regulation of hemopoietic stem cell proliferation GOC:TermGenie down-regulation of hematopoietic stem cell proliferation GOC:TermGenie down-regulation of hemopoietic stem cell proliferation GOC:TermGenie downregulation of hematopoietic stem cell proliferation GOC:TermGenie downregulation of hemopoietic stem cell proliferation GOC:TermGenie negative regulation of hemopoietic stem cell proliferation GOC:TermGenie inhibition of hematopoietic stem cell proliferation GOC:TermGenie inhibition of hemopoietic stem cell proliferation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of hematopoietic stem cell proliferation. ss 2013-04-02T05:13:31Z positive regulation of hemopoietic stem cell proliferation up regulation of hematopoietic stem cell proliferation up regulation of hemopoietic stem cell proliferation up-regulation of hematopoietic stem cell proliferation up-regulation of hemopoietic stem cell proliferation upregulation of hematopoietic stem cell proliferation upregulation of hemopoietic stem cell proliferation activation of hematopoietic stem cell proliferation activation of hemopoietic stem cell proliferation biological_process GO:1902035 positive regulation of hematopoietic stem cell proliferation GO:1902035 Any process that activates or increases the frequency, rate or extent of hematopoietic stem cell proliferation. GOC:TermGenie PMID:23403623 positive regulation of hemopoietic stem cell proliferation GOC:TermGenie up regulation of hematopoietic stem cell proliferation GOC:TermGenie up regulation of hemopoietic stem cell proliferation GOC:TermGenie up-regulation of hematopoietic stem cell proliferation GOC:TermGenie up-regulation of hemopoietic stem cell proliferation GOC:TermGenie upregulation of hematopoietic stem cell proliferation GOC:TermGenie upregulation of hemopoietic stem cell proliferation GOC:TermGenie activation of hematopoietic stem cell proliferation GOC:TermGenie activation of hemopoietic stem cell proliferation GOC:TermGenie Any process that modulates the frequency, rate or extent of hematopoietic stem cell differentiation. ss 2013-04-02T05:19:09Z Reactome:R-HSA-8939236 regulation of haematopoietic stem cell differentiation regulation of haemopoietic stem cell differentiation regulation of hemopoietic stem cell differentiation biological_process GO:1902036 regulation of hematopoietic stem cell differentiation GO:1902036 Any process that modulates the frequency, rate or extent of hematopoietic stem cell differentiation. GOC:TermGenie PMID:23403623 Reactome:R-HSA-8939236 RUNX1 regulates transcription of genes involved in differentiation of HSCs regulation of haematopoietic stem cell differentiation GOC:TermGenie regulation of haemopoietic stem cell differentiation GOC:TermGenie regulation of hemopoietic stem cell differentiation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic stem cell differentiation. ss 2013-04-02T05:19:14Z down regulation of haematopoietic stem cell differentiation down regulation of haemopoietic stem cell differentiation down regulation of hematopoietic stem cell differentiation down regulation of hemopoietic stem cell differentiation down-regulation of haematopoietic stem cell differentiation down-regulation of haemopoietic stem cell differentiation down-regulation of hematopoietic stem cell differentiation down-regulation of hemopoietic stem cell differentiation downregulation of haematopoietic stem cell differentiation downregulation of haemopoietic stem cell differentiation downregulation of hematopoietic stem cell differentiation downregulation of hemopoietic stem cell differentiation negative regulation of haematopoietic stem cell differentiation negative regulation of haemopoietic stem cell differentiation negative regulation of hemopoietic stem cell differentiation inhibition of haematopoietic stem cell differentiation inhibition of haemopoietic stem cell differentiation inhibition of hematopoietic stem cell differentiation inhibition of hemopoietic stem cell differentiation biological_process GO:1902037 negative regulation of hematopoietic stem cell differentiation GO:1902037 Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic stem cell differentiation. GOC:TermGenie PMID:23403623 down regulation of haematopoietic stem cell differentiation GOC:TermGenie down regulation of haemopoietic stem cell differentiation GOC:TermGenie down regulation of hematopoietic stem cell differentiation GOC:TermGenie down regulation of hemopoietic stem cell differentiation GOC:TermGenie down-regulation of haematopoietic stem cell differentiation GOC:TermGenie down-regulation of haemopoietic stem cell differentiation GOC:TermGenie down-regulation of hematopoietic stem cell differentiation GOC:TermGenie down-regulation of hemopoietic stem cell differentiation GOC:TermGenie downregulation of haematopoietic stem cell differentiation GOC:TermGenie downregulation of haemopoietic stem cell differentiation GOC:TermGenie downregulation of hematopoietic stem cell differentiation GOC:TermGenie downregulation of hemopoietic stem cell differentiation GOC:TermGenie negative regulation of haematopoietic stem cell differentiation GOC:TermGenie negative regulation of haemopoietic stem cell differentiation GOC:TermGenie negative regulation of hemopoietic stem cell differentiation GOC:TermGenie inhibition of haematopoietic stem cell differentiation GOC:TermGenie inhibition of haemopoietic stem cell differentiation GOC:TermGenie inhibition of hematopoietic stem cell differentiation GOC:TermGenie inhibition of hemopoietic stem cell differentiation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of hematopoietic stem cell differentiation. ss 2013-04-02T05:19:19Z positive regulation of haematopoietic stem cell differentiation positive regulation of haemopoietic stem cell differentiation positive regulation of hemopoietic stem cell differentiation up regulation of haematopoietic stem cell differentiation up regulation of haemopoietic stem cell differentiation up regulation of hematopoietic stem cell differentiation up regulation of hemopoietic stem cell differentiation up-regulation of haematopoietic stem cell differentiation up-regulation of haemopoietic stem cell differentiation up-regulation of hematopoietic stem cell differentiation up-regulation of hemopoietic stem cell differentiation upregulation of haematopoietic stem cell differentiation upregulation of haemopoietic stem cell differentiation upregulation of hematopoietic stem cell differentiation upregulation of hemopoietic stem cell differentiation activation of haematopoietic stem cell differentiation activation of haemopoietic stem cell differentiation activation of hematopoietic stem cell differentiation activation of hemopoietic stem cell differentiation biological_process GO:1902038 positive regulation of hematopoietic stem cell differentiation GO:1902038 Any process that activates or increases the frequency, rate or extent of hematopoietic stem cell differentiation. GOC:TermGenie PMID:23403623 positive regulation of haematopoietic stem cell differentiation GOC:TermGenie positive regulation of haemopoietic stem cell differentiation GOC:TermGenie positive regulation of hemopoietic stem cell differentiation GOC:TermGenie up regulation of haematopoietic stem cell differentiation GOC:TermGenie up regulation of haemopoietic stem cell differentiation GOC:TermGenie up regulation of hematopoietic stem cell differentiation GOC:TermGenie up regulation of hemopoietic stem cell differentiation GOC:TermGenie up-regulation of haematopoietic stem cell differentiation GOC:TermGenie up-regulation of haemopoietic stem cell differentiation GOC:TermGenie up-regulation of hematopoietic stem cell differentiation GOC:TermGenie up-regulation of hemopoietic stem cell differentiation GOC:TermGenie upregulation of haematopoietic stem cell differentiation GOC:TermGenie upregulation of haemopoietic stem cell differentiation GOC:TermGenie upregulation of hematopoietic stem cell differentiation GOC:TermGenie upregulation of hemopoietic stem cell differentiation GOC:TermGenie activation of haematopoietic stem cell differentiation GOC:TermGenie activation of haemopoietic stem cell differentiation GOC:TermGenie activation of hematopoietic stem cell differentiation GOC:TermGenie activation of hemopoietic stem cell differentiation GOC:TermGenie Any process that modulates the frequency, rate or extent of leukocyte differentiation. pr 2013-05-02T17:32:42Z regulation of immune cell differentiation regulation of leucocyte differentiation biological_process GO:1902105 regulation of leukocyte differentiation GO:1902105 Any process that modulates the frequency, rate or extent of leukocyte differentiation. GOC:TermGenie GOC:add regulation of immune cell differentiation GOC:TermGenie regulation of leucocyte differentiation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of leukocyte differentiation. pr 2013-05-02T17:32:47Z down regulation of immune cell differentiation down regulation of leucocyte differentiation down regulation of leukocyte differentiation down-regulation of immune cell differentiation down-regulation of leucocyte differentiation down-regulation of leukocyte differentiation downregulation of immune cell differentiation downregulation of leucocyte differentiation downregulation of leukocyte differentiation negative regulation of immune cell differentiation negative regulation of leucocyte differentiation inhibition of immune cell differentiation inhibition of leucocyte differentiation inhibition of leukocyte differentiation biological_process GO:1902106 negative regulation of leukocyte differentiation GO:1902106 Any process that stops, prevents or reduces the frequency, rate or extent of leukocyte differentiation. GOC:TermGenie GOC:add down regulation of immune cell differentiation GOC:TermGenie down regulation of leucocyte differentiation GOC:TermGenie down regulation of leukocyte differentiation GOC:TermGenie down-regulation of immune cell differentiation GOC:TermGenie down-regulation of leucocyte differentiation GOC:TermGenie down-regulation of leukocyte differentiation GOC:TermGenie downregulation of immune cell differentiation GOC:TermGenie downregulation of leucocyte differentiation GOC:TermGenie downregulation of leukocyte differentiation GOC:TermGenie negative regulation of immune cell differentiation GOC:TermGenie negative regulation of leucocyte differentiation GOC:TermGenie inhibition of immune cell differentiation GOC:TermGenie inhibition of leucocyte differentiation GOC:TermGenie inhibition of leukocyte differentiation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of leukocyte differentiation. pr 2013-05-02T17:32:52Z positive regulation of immune cell differentiation positive regulation of leucocyte differentiation up regulation of immune cell differentiation up regulation of leucocyte differentiation up regulation of leukocyte differentiation up-regulation of immune cell differentiation up-regulation of leucocyte differentiation up-regulation of leukocyte differentiation upregulation of immune cell differentiation upregulation of leucocyte differentiation upregulation of leukocyte differentiation activation of immune cell differentiation activation of leucocyte differentiation activation of leukocyte differentiation biological_process GO:1902107 positive regulation of leukocyte differentiation GO:1902107 Any process that activates or increases the frequency, rate or extent of leukocyte differentiation. GOC:TermGenie GOC:add positive regulation of immune cell differentiation GOC:TermGenie positive regulation of leucocyte differentiation GOC:TermGenie up regulation of immune cell differentiation GOC:TermGenie up regulation of leucocyte differentiation GOC:TermGenie up regulation of leukocyte differentiation GOC:TermGenie up-regulation of immune cell differentiation GOC:TermGenie up-regulation of leucocyte differentiation GOC:TermGenie up-regulation of leukocyte differentiation GOC:TermGenie upregulation of immune cell differentiation GOC:TermGenie upregulation of leucocyte differentiation GOC:TermGenie upregulation of leukocyte differentiation GOC:TermGenie activation of immune cell differentiation GOC:TermGenie activation of leucocyte differentiation GOC:TermGenie activation of leukocyte differentiation GOC:TermGenie Any process that modulates the frequency, rate or extent of organelle assembly. pr 2013-05-14T09:43:21Z biological_process GO:1902115 regulation of organelle assembly GO:1902115 Any process that modulates the frequency, rate or extent of organelle assembly. GOC:TermGenie GOC:pr Any process that stops, prevents or reduces the frequency, rate or extent of organelle assembly. pr 2013-05-14T09:43:31Z down regulation of organelle assembly down-regulation of organelle assembly downregulation of organelle assembly inhibition of organelle assembly biological_process GO:1902116 negative regulation of organelle assembly GO:1902116 Any process that stops, prevents or reduces the frequency, rate or extent of organelle assembly. GOC:TermGenie GOC:pr down regulation of organelle assembly GOC:TermGenie down-regulation of organelle assembly GOC:TermGenie downregulation of organelle assembly GOC:TermGenie inhibition of organelle assembly GOC:TermGenie Any process that activates or increases the frequency, rate or extent of organelle assembly. pr 2013-05-14T09:43:36Z up regulation of organelle assembly up-regulation of organelle assembly upregulation of organelle assembly activation of organelle assembly biological_process GO:1902117 positive regulation of organelle assembly GO:1902117 Any process that activates or increases the frequency, rate or extent of organelle assembly. GOC:TermGenie GOC:pr up regulation of organelle assembly GOC:TermGenie up-regulation of organelle assembly GOC:TermGenie upregulation of organelle assembly GOC:TermGenie activation of organelle assembly GOC:TermGenie Any apoptotic process in an erythrocyte. rl 2013-06-13T10:02:29Z RBC apoptotic process red blood cell apoptotic process RBC apoptosis erythrocyte apoptosis red blood cell apoptosis biological_process GO:1902217 erythrocyte apoptotic process GO:1902217 Any apoptotic process in an erythrocyte. GOC:BHF GOC:TermGenie GOC:mtg_apoptosis GOC:rl PMID:14569084 RBC apoptotic process GOC:TermGenie red blood cell apoptotic process GOC:TermGenie RBC apoptosis GOC:TermGenie erythrocyte apoptosis GOC:TermGenie red blood cell apoptosis GOC:TermGenie Any process that modulates the frequency, rate or extent of erythrocyte apoptotic process. rl 2013-06-20T19:30:53Z regulation of RBC apoptotic process regulation of red blood cell apoptotic process regulation of RBC apoptosis regulation of erythrocyte apoptosis regulation of red blood cell apoptosis biological_process GO:1902250 regulation of erythrocyte apoptotic process GO:1902250 Any process that modulates the frequency, rate or extent of erythrocyte apoptotic process. GOC:BHF GOC:TermGenie GOC:mtg_apoptosis GOC:rl PMID:14569084 regulation of RBC apoptotic process GOC:TermGenie regulation of red blood cell apoptotic process GOC:TermGenie regulation of RBC apoptosis GOC:TermGenie regulation of erythrocyte apoptosis GOC:TermGenie regulation of red blood cell apoptosis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of erythrocyte apoptotic process. rl 2013-06-20T19:30:59Z down regulation of RBC apoptotic process down regulation of erythrocyte apoptotic process down regulation of red blood cell apoptotic process down-regulation of RBC apoptotic process down-regulation of erythrocyte apoptotic process down-regulation of red blood cell apoptotic process downregulation of RBC apoptotic process downregulation of erythrocyte apoptotic process downregulation of red blood cell apoptotic process negative regulation of RBC apoptotic process negative regulation of red blood cell apoptotic process down regulation of RBC apoptosis down regulation of erythrocyte apoptosis down regulation of red blood cell apoptosis down-regulation of RBC apoptosis down-regulation of erythrocyte apoptosis down-regulation of red blood cell apoptosis downregulation of RBC apoptosis downregulation of erythrocyte apoptosis downregulation of red blood cell apoptosis inhibition of RBC apoptosis inhibition of RBC apoptotic process inhibition of erythrocyte apoptosis inhibition of erythrocyte apoptotic process inhibition of red blood cell apoptosis inhibition of red blood cell apoptotic process negative regulation of RBC apoptosis negative regulation of erythrocyte apoptosis negative regulation of red blood cell apoptosis biological_process GO:1902251 negative regulation of erythrocyte apoptotic process GO:1902251 Any process that stops, prevents or reduces the frequency, rate or extent of erythrocyte apoptotic process. GOC:BHF GOC:TermGenie GOC:mtg_apoptosis GOC:rl PMID:14569084 down regulation of RBC apoptotic process GOC:TermGenie down regulation of erythrocyte apoptotic process GOC:TermGenie down regulation of red blood cell apoptotic process GOC:TermGenie down-regulation of RBC apoptotic process GOC:TermGenie down-regulation of erythrocyte apoptotic process GOC:TermGenie down-regulation of red blood cell apoptotic process GOC:TermGenie downregulation of RBC apoptotic process GOC:TermGenie downregulation of erythrocyte apoptotic process GOC:TermGenie downregulation of red blood cell apoptotic process GOC:TermGenie negative regulation of RBC apoptotic process GOC:TermGenie negative regulation of red blood cell apoptotic process GOC:TermGenie down regulation of RBC apoptosis GOC:TermGenie down regulation of erythrocyte apoptosis GOC:TermGenie down regulation of red blood cell apoptosis GOC:TermGenie down-regulation of RBC apoptosis GOC:TermGenie down-regulation of erythrocyte apoptosis GOC:TermGenie down-regulation of red blood cell apoptosis GOC:TermGenie downregulation of RBC apoptosis GOC:TermGenie downregulation of erythrocyte apoptosis GOC:TermGenie downregulation of red blood cell apoptosis GOC:TermGenie inhibition of RBC apoptosis GOC:TermGenie inhibition of RBC apoptotic process GOC:TermGenie inhibition of erythrocyte apoptosis GOC:TermGenie inhibition of erythrocyte apoptotic process GOC:TermGenie inhibition of red blood cell apoptosis GOC:TermGenie inhibition of red blood cell apoptotic process GOC:TermGenie negative regulation of RBC apoptosis GOC:TermGenie negative regulation of erythrocyte apoptosis GOC:TermGenie negative regulation of red blood cell apoptosis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of erythrocyte apoptotic process. rl 2013-06-20T19:31:04Z positive regulation of RBC apoptotic process positive regulation of red blood cell apoptotic process up regulation of RBC apoptotic process up regulation of erythrocyte apoptotic process up regulation of red blood cell apoptotic process up-regulation of RBC apoptotic process up-regulation of erythrocyte apoptotic process up-regulation of red blood cell apoptotic process upregulation of RBC apoptotic process upregulation of erythrocyte apoptotic process upregulation of red blood cell apoptotic process activation of RBC apoptosis activation of RBC apoptotic process activation of erythrocyte apoptosis activation of erythrocyte apoptotic process activation of red blood cell apoptosis activation of red blood cell apoptotic process positive regulation of RBC apoptosis positive regulation of erythrocyte apoptosis positive regulation of red blood cell apoptosis up regulation of RBC apoptosis up regulation of erythrocyte apoptosis up regulation of red blood cell apoptosis up-regulation of RBC apoptosis up-regulation of erythrocyte apoptosis up-regulation of red blood cell apoptosis upregulation of RBC apoptosis upregulation of erythrocyte apoptosis upregulation of red blood cell apoptosis biological_process GO:1902252 positive regulation of erythrocyte apoptotic process GO:1902252 Any process that activates or increases the frequency, rate or extent of erythrocyte apoptotic process. GOC:BHF GOC:TermGenie GOC:mtg_apoptosis GOC:rl PMID:14569084 positive regulation of RBC apoptotic process GOC:TermGenie positive regulation of red blood cell apoptotic process GOC:TermGenie up regulation of RBC apoptotic process GOC:TermGenie up regulation of erythrocyte apoptotic process GOC:TermGenie up regulation of red blood cell apoptotic process GOC:TermGenie up-regulation of RBC apoptotic process GOC:TermGenie up-regulation of erythrocyte apoptotic process GOC:TermGenie up-regulation of red blood cell apoptotic process GOC:TermGenie upregulation of RBC apoptotic process GOC:TermGenie upregulation of erythrocyte apoptotic process GOC:TermGenie upregulation of red blood cell apoptotic process GOC:TermGenie activation of RBC apoptosis GOC:TermGenie activation of RBC apoptotic process GOC:TermGenie activation of erythrocyte apoptosis GOC:TermGenie activation of erythrocyte apoptotic process GOC:TermGenie activation of red blood cell apoptosis GOC:TermGenie activation of red blood cell apoptotic process GOC:TermGenie positive regulation of RBC apoptosis GOC:TermGenie positive regulation of erythrocyte apoptosis GOC:TermGenie positive regulation of red blood cell apoptosis GOC:TermGenie up regulation of RBC apoptosis GOC:TermGenie up regulation of erythrocyte apoptosis GOC:TermGenie up regulation of red blood cell apoptosis GOC:TermGenie up-regulation of RBC apoptosis GOC:TermGenie up-regulation of erythrocyte apoptosis GOC:TermGenie up-regulation of red blood cell apoptosis GOC:TermGenie upregulation of RBC apoptosis GOC:TermGenie upregulation of erythrocyte apoptosis GOC:TermGenie upregulation of red blood cell apoptosis GOC:TermGenie Any process that modulates the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis. dph 2013-06-24T19:12:24Z regulation of apoptosis involved in outflow tract morphogenesis biological_process GO:1902256 regulation of apoptotic process involved in outflow tract morphogenesis GO:1902256 Any process that modulates the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis. GOC:TermGenie GOC:dph GOC:mtg_apoptosis PMID:16839542 regulation of apoptosis involved in outflow tract morphogenesis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis. dph 2013-06-24T19:12:30Z down regulation of apoptotic process involved in outflow tract morphogenesis down-regulation of apoptotic process involved in outflow tract morphogenesis downregulation of apoptotic process involved in outflow tract morphogenesis down regulation of apoptosis involved in outflow tract morphogenesis down-regulation of apoptosis involved in outflow tract morphogenesis downregulation of apoptosis involved in outflow tract morphogenesis inhibition of apoptosis involved in outflow tract morphogenesis inhibition of apoptotic process involved in outflow tract morphogenesis negative regulation of apoptosis involved in outflow tract morphogenesis biological_process GO:1902257 negative regulation of apoptotic process involved in outflow tract morphogenesis GO:1902257 Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis. GOC:TermGenie GOC:dph GOC:mtg_apoptosis PMID:16839542 down regulation of apoptotic process involved in outflow tract morphogenesis GOC:TermGenie down-regulation of apoptotic process involved in outflow tract morphogenesis GOC:TermGenie downregulation of apoptotic process involved in outflow tract morphogenesis GOC:TermGenie down regulation of apoptosis involved in outflow tract morphogenesis GOC:TermGenie down-regulation of apoptosis involved in outflow tract morphogenesis GOC:TermGenie downregulation of apoptosis involved in outflow tract morphogenesis GOC:TermGenie inhibition of apoptosis involved in outflow tract morphogenesis GOC:TermGenie inhibition of apoptotic process involved in outflow tract morphogenesis GOC:TermGenie negative regulation of apoptosis involved in outflow tract morphogenesis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis. dph 2013-06-24T19:12:42Z up regulation of apoptotic process involved in outflow tract morphogenesis up-regulation of apoptotic process involved in outflow tract morphogenesis upregulation of apoptotic process involved in outflow tract morphogenesis activation of apoptosis involved in outflow tract morphogenesis activation of apoptotic process involved in outflow tract morphogenesis positive regulation of apoptosis involved in outflow tract morphogenesis up regulation of apoptosis involved in outflow tract morphogenesis up-regulation of apoptosis involved in outflow tract morphogenesis upregulation of apoptosis involved in outflow tract morphogenesis biological_process GO:1902258 positive regulation of apoptotic process involved in outflow tract morphogenesis GO:1902258 Any process that activates or increases the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis. GOC:TermGenie GOC:dph GOC:mtg_apoptosis PMID:16839542 up regulation of apoptotic process involved in outflow tract morphogenesis GOC:TermGenie up-regulation of apoptotic process involved in outflow tract morphogenesis GOC:TermGenie upregulation of apoptotic process involved in outflow tract morphogenesis GOC:TermGenie activation of apoptosis involved in outflow tract morphogenesis GOC:TermGenie activation of apoptotic process involved in outflow tract morphogenesis GOC:TermGenie positive regulation of apoptosis involved in outflow tract morphogenesis GOC:TermGenie up regulation of apoptosis involved in outflow tract morphogenesis GOC:TermGenie up-regulation of apoptosis involved in outflow tract morphogenesis GOC:TermGenie upregulation of apoptosis involved in outflow tract morphogenesis GOC:TermGenie Any apoptotic process that is involved in blood vessel morphogenesis. dph 2013-06-25T16:16:00Z apoptotic cell death involved in patterning of blood vessels apoptotic programmed cell death involved in patterning of blood vessels programmed cell death by apoptosis involved in patterning of blood vessels apoptosis involved in patterning of blood vessels apoptotic program involved in patterning of blood vessels type I programmed cell death involved in patterning of blood vessels biological_process signaling (initiator) caspase activity involved in patterning of blood vessels GO:1902262 apoptotic process involved in blood vessel morphogenesis GO:1902262 Any apoptotic process that is involved in blood vessel morphogenesis. GOC:TermGenie GOC:dph GOC:mtg_apoptosis PMID:16163358 apoptotic cell death involved in patterning of blood vessels GOC:TermGenie apoptotic programmed cell death involved in patterning of blood vessels GOC:TermGenie programmed cell death by apoptosis involved in patterning of blood vessels GOC:TermGenie apoptosis involved in patterning of blood vessels GOC:TermGenie apoptotic program involved in patterning of blood vessels GOC:TermGenie type I programmed cell death involved in patterning of blood vessels GOC:TermGenie signaling (initiator) caspase activity involved in patterning of blood vessels GOC:TermGenie Any process that modulates the frequency, rate or extent of chromatin organization. bf 2013-07-01T13:21:52Z GO:0001672 GO:1903308 regulation of chromatin organisation regulation of establishment or maintenance of chromatin architecture biological_process regulation of chromatin assembly or disassembly regulation of chromatin assembly/disassembly regulation of chromatin modification GO:1902275 regulation of chromatin organization GO:1902275 Any process that modulates the frequency, rate or extent of chromatin organization. GOC:TermGenie GOC:bf GOC:vw GO_REF:0000058 PMID:18314879 regulation of chromatin organisation GOC:TermGenie regulation of establishment or maintenance of chromatin architecture GOC:TermGenie Any process that modulates the frequency, rate or extent of apoptotic process involved in morphogenesis. sart 2013-07-29T15:03:16Z regulation of apoptosis involved in morphogenesis biological_process regulation of apoptosis involved in development regulation of morphogenetic apoptosis GO:1902337 regulation of apoptotic process involved in morphogenesis GO:1902337 Any process that modulates the frequency, rate or extent of apoptotic process involved in morphogenesis. GOC:TermGenie GOC:sart PMID:12202035 regulation of apoptosis involved in morphogenesis GOC:TermGenie regulation of apoptosis involved in development GOC:TermGenie regulation of morphogenetic apoptosis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in morphogenesis. sart 2013-07-29T15:03:25Z down regulation of apoptotic process involved in morphogenesis down-regulation of apoptotic process involved in morphogenesis downregulation of apoptotic process involved in morphogenesis down regulation of apoptosis involved in morphogenesis down-regulation of apoptosis involved in morphogenesis downregulation of apoptosis involved in morphogenesis inhibition of apoptosis involved in morphogenesis inhibition of apoptotic process involved in morphogenesis negative regulation of apoptosis involved in morphogenesis biological_process down regulation of apoptosis involved in development down regulation of morphogenetic apoptosis down-regulation of apoptosis involved in development down-regulation of morphogenetic apoptosis downregulation of apoptosis involved in development downregulation of morphogenetic apoptosis inhibition of apoptosis involved in development inhibition of morphogenetic apoptosis negative regulation of apoptosis involved in development negative regulation of morphogenetic apoptosis GO:1902338 negative regulation of apoptotic process involved in morphogenesis GO:1902338 Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in morphogenesis. GOC:TermGenie GOC:sart PMID:12202035 down regulation of apoptotic process involved in morphogenesis GOC:TermGenie down-regulation of apoptotic process involved in morphogenesis GOC:TermGenie downregulation of apoptotic process involved in morphogenesis GOC:TermGenie down regulation of apoptosis involved in morphogenesis GOC:TermGenie down-regulation of apoptosis involved in morphogenesis GOC:TermGenie downregulation of apoptosis involved in morphogenesis GOC:TermGenie inhibition of apoptosis involved in morphogenesis GOC:TermGenie inhibition of apoptotic process involved in morphogenesis GOC:TermGenie negative regulation of apoptosis involved in morphogenesis GOC:TermGenie down regulation of apoptosis involved in development GOC:TermGenie down regulation of morphogenetic apoptosis GOC:TermGenie down-regulation of apoptosis involved in development GOC:TermGenie down-regulation of morphogenetic apoptosis GOC:TermGenie downregulation of apoptosis involved in development GOC:TermGenie downregulation of morphogenetic apoptosis GOC:TermGenie inhibition of apoptosis involved in development GOC:TermGenie inhibition of morphogenetic apoptosis GOC:TermGenie negative regulation of apoptosis involved in development GOC:TermGenie negative regulation of morphogenetic apoptosis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of apoptotic process involved in morphogenesis. sart 2013-07-29T15:03:33Z up regulation of apoptotic process involved in morphogenesis up-regulation of apoptotic process involved in morphogenesis upregulation of apoptotic process involved in morphogenesis activation of apoptosis involved in morphogenesis activation of apoptotic process involved in morphogenesis positive regulation of apoptosis involved in morphogenesis up regulation of apoptosis involved in morphogenesis up-regulation of apoptosis involved in morphogenesis upregulation of apoptosis involved in morphogenesis biological_process activation of apoptosis involved in development activation of morphogenetic apoptosis positive regulation of apoptosis involved in development positive regulation of morphogenetic apoptosis up regulation of apoptosis involved in development up regulation of morphogenetic apoptosis up-regulation of apoptosis involved in development up-regulation of morphogenetic apoptosis upregulation of apoptosis involved in development upregulation of morphogenetic apoptosis GO:1902339 positive regulation of apoptotic process involved in morphogenesis GO:1902339 Any process that activates or increases the frequency, rate or extent of apoptotic process involved in morphogenesis. GOC:TermGenie GOC:sart PMID:12202035 up regulation of apoptotic process involved in morphogenesis GOC:TermGenie up-regulation of apoptotic process involved in morphogenesis GOC:TermGenie upregulation of apoptotic process involved in morphogenesis GOC:TermGenie activation of apoptosis involved in morphogenesis GOC:TermGenie activation of apoptotic process involved in morphogenesis GOC:TermGenie positive regulation of apoptosis involved in morphogenesis GOC:TermGenie up regulation of apoptosis involved in morphogenesis GOC:TermGenie up-regulation of apoptosis involved in morphogenesis GOC:TermGenie upregulation of apoptosis involved in morphogenesis GOC:TermGenie activation of apoptosis involved in development GOC:TermGenie activation of morphogenetic apoptosis GOC:TermGenie positive regulation of apoptosis involved in development GOC:TermGenie positive regulation of morphogenetic apoptosis GOC:TermGenie up regulation of apoptosis involved in development GOC:TermGenie up regulation of morphogenetic apoptosis GOC:TermGenie up-regulation of apoptosis involved in development GOC:TermGenie up-regulation of morphogenetic apoptosis GOC:TermGenie upregulation of apoptosis involved in development GOC:TermGenie upregulation of morphogenetic apoptosis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of chromosome condensation. dgf 2013-07-29T20:54:14Z down regulation of chromosome condensation down regulation of eukaryotic chromosome condensation down regulation of nuclear chromosome condensation down-regulation of chromosome condensation down-regulation of eukaryotic chromosome condensation down-regulation of nuclear chromosome condensation downregulation of chromosome condensation downregulation of eukaryotic chromosome condensation downregulation of nuclear chromosome condensation negative regulation of eukaryotic chromosome condensation negative regulation of nuclear chromosome condensation inhibition of chromosome condensation inhibition of eukaryotic chromosome condensation inhibition of nuclear chromosome condensation biological_process GO:1902340 negative regulation of chromosome condensation GO:1902340 Any process that stops, prevents or reduces the frequency, rate or extent of chromosome condensation. GOC:TermGenie PMID:23219725 down regulation of chromosome condensation GOC:TermGenie down regulation of eukaryotic chromosome condensation GOC:TermGenie down regulation of nuclear chromosome condensation GOC:TermGenie down-regulation of chromosome condensation GOC:TermGenie down-regulation of eukaryotic chromosome condensation GOC:TermGenie down-regulation of nuclear chromosome condensation GOC:TermGenie downregulation of chromosome condensation GOC:TermGenie downregulation of eukaryotic chromosome condensation GOC:TermGenie downregulation of nuclear chromosome condensation GOC:TermGenie negative regulation of eukaryotic chromosome condensation GOC:TermGenie negative regulation of nuclear chromosome condensation GOC:TermGenie inhibition of chromosome condensation GOC:TermGenie inhibition of eukaryotic chromosome condensation GOC:TermGenie inhibition of nuclear chromosome condensation GOC:TermGenie The directed movement of sulfate across a membrane. dph 2013-08-14T14:46:04Z sulphate transport biological_process GO:1902358 sulfate transmembrane transport GO:1902358 The directed movement of sulfate across a membrane. GOC:TermGenie GOC:dph PMID:9055073 A process in which a protein is transported to, or maintained in, a location within a cell junction. tb 2013-09-13T16:55:57Z protein localisation in cell junction protein localisation to cell junction protein localization in cell junction biological_process GO:1902414 protein localization to cell junction GO:1902414 A process in which a protein is transported to, or maintained in, a location within a cell junction. GOC:TermGenie PMID:18332111 protein localisation in cell junction GOC:TermGenie protein localisation to cell junction GOC:TermGenie protein localization in cell junction GOC:TermGenie The directed movement of sulfate from outside of a cell, across the plasma membrane and into the cytosol. mah 2013-10-07T14:12:38Z sulfate import into cell sulphate import into cell biological_process GO:1902434 sulfate import across plasma membrane GO:1902434 The directed movement of sulfate from outside of a cell, across the plasma membrane and into the cytosol. GOC:TermGenie PMID:14723223 A process in which a protein is transported to, or maintained in, a location within a cell leading edge. jl 2013-10-22T12:36:07Z protein localisation in cell leading edge protein localisation to cell leading edge protein localization in cell leading edge biological_process GO:1902463 protein localization to cell leading edge GO:1902463 A process in which a protein is transported to, or maintained in, a location within a cell leading edge. GOC:TermGenie GOC:lb PMID:21543326 protein localisation in cell leading edge GOC:TermGenie protein localisation to cell leading edge GOC:TermGenie protein localization in cell leading edge GOC:TermGenie Any process that modulates the frequency, rate or extent of protein localization to synapse. kmv 2013-10-25T15:09:09Z regulation of protein localisation to synapse biological_process GO:1902473 regulation of protein localization to synapse GO:1902473 Any process that modulates the frequency, rate or extent of protein localization to synapse. GOC:TermGenie GOC:kmv PMID:22588719 regulation of protein localisation to synapse GOC:TermGenie Any process that activates or increases the frequency, rate or extent of protein localization to synapse. kmv 2013-10-25T15:09:18Z positive regulation of protein localisation to synapse up regulation of protein localisation to synapse up regulation of protein localization to synapse up-regulation of protein localisation to synapse up-regulation of protein localization to synapse upregulation of protein localisation to synapse upregulation of protein localization to synapse activation of protein localisation to synapse activation of protein localization to synapse biological_process GO:1902474 positive regulation of protein localization to synapse GO:1902474 Any process that activates or increases the frequency, rate or extent of protein localization to synapse. GOC:TermGenie GOC:kmv PMID:22588719 positive regulation of protein localisation to synapse GOC:TermGenie up regulation of protein localisation to synapse GOC:TermGenie up regulation of protein localization to synapse GOC:TermGenie up-regulation of protein localisation to synapse GOC:TermGenie up-regulation of protein localization to synapse GOC:TermGenie upregulation of protein localisation to synapse GOC:TermGenie upregulation of protein localization to synapse GOC:TermGenie activation of protein localisation to synapse GOC:TermGenie activation of protein localization to synapse GOC:TermGenie Any process that modulates the frequency, rate or extent of organelle transport along microtubule. dph 2013-11-15T20:15:17Z regulation of microtubule-based organelle localization biological_process GO:1902513 regulation of organelle transport along microtubule GO:1902513 Any process that modulates the frequency, rate or extent of organelle transport along microtubule. GOC:TermGenie GOC:dph PMID:21147087 regulation of microtubule-based organelle localization GOC:TermGenie Any process that modulates the frequency, rate or extent of intracellular signal transduction. bf 2013-12-02T11:32:52Z GO:0010627 regulation of intracellular signaling cascade regulation of intracellular signaling chain regulation of intracellular protein kinase cascade regulation of intracellular signal transduction pathway regulation of signal transmission via intracellular cascade biological_process regulation of intracellular signaling pathway regulation of signal transduction via intracellular signaling cascade GO:1902531 regulation of intracellular signal transduction GO:1902531 Any process that modulates the frequency, rate or extent of intracellular signal transduction. GOC:TermGenie GOC:dph GOC:signaling GOC:tb regulation of intracellular signaling cascade GOC:TermGenie regulation of intracellular signaling chain GOC:TermGenie regulation of intracellular signal transduction pathway GOC:TermGenie regulation of signal transmission via intracellular cascade GOC:TermGenie regulation of intracellular signaling pathway GOC:TermGenie regulation of signal transduction via intracellular signaling cascade GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of intracellular signal transduction. bf 2013-12-02T11:33:01Z GO:0010741 down regulation of intracellular signal transduction down regulation of intracellular signaling chain down-regulation of intracellular signal transduction down-regulation of intracellular signaling chain downregulation of intracellular signal transduction downregulation of intracellular signaling chain negative regulation of intracellular protein kinase cascade negative regulation of intracellular signaling cascade negative regulation of intracellular signaling chain down regulation of intracellular signal transduction pathway down regulation of intracellular signaling cascade down regulation of signal transmission via intracellular cascade down-regulation of intracellular signal transduction pathway downregulation of intracellular signal transduction pathway downregulation of intracellular signaling cascade downregulation of signal transmission via intracellular cascade inhibition of intracellular signal transduction inhibition of intracellular signal transduction pathway inhibition of intracellular signaling cascade inhibition of intracellular signaling chain inhibition of signal transmission via intracellular cascade negative regulation of intracellular signal transduction pathway negative regulation of signal transmission via intracellular cascade biological_process down regulation of intracellular signaling pathway down regulation of signal transduction via intracellular signaling cascade down-regulation of intracellular signaling cascade down-regulation of intracellular signaling pathway down-regulation of signal transduction via intracellular signaling cascade down-regulation of signal transmission via intracellular cascade downregulation of intracellular signaling pathway downregulation of signal transduction via intracellular signaling cascade inhibition of intracellular signaling pathway inhibition of signal transduction via intracellular signaling cascade negative regulation of intracellular signaling pathway negative regulation of signal transduction via intracellular signaling cascade GO:1902532 negative regulation of intracellular signal transduction GO:1902532 Any process that stops, prevents or reduces the frequency, rate or extent of intracellular signal transduction. GOC:TermGenie GOC:dph GOC:signaling GOC:tb down regulation of intracellular signal transduction GOC:TermGenie down regulation of intracellular signaling chain GOC:TermGenie down-regulation of intracellular signal transduction GOC:TermGenie down-regulation of intracellular signaling chain GOC:TermGenie downregulation of intracellular signal transduction GOC:TermGenie downregulation of intracellular signaling chain GOC:TermGenie negative regulation of intracellular signaling cascade GOC:TermGenie negative regulation of intracellular signaling chain GOC:TermGenie down regulation of intracellular signal transduction pathway GOC:TermGenie down regulation of intracellular signaling cascade GOC:TermGenie down regulation of signal transmission via intracellular cascade GOC:TermGenie down-regulation of intracellular signal transduction pathway GOC:TermGenie downregulation of intracellular signal transduction pathway GOC:TermGenie downregulation of intracellular signaling cascade GOC:TermGenie downregulation of signal transmission via intracellular cascade GOC:TermGenie inhibition of intracellular signal transduction GOC:TermGenie inhibition of intracellular signal transduction pathway GOC:TermGenie inhibition of intracellular signaling cascade GOC:TermGenie inhibition of intracellular signaling chain GOC:TermGenie inhibition of signal transmission via intracellular cascade GOC:TermGenie negative regulation of intracellular signal transduction pathway GOC:TermGenie negative regulation of signal transmission via intracellular cascade GOC:TermGenie down regulation of intracellular signaling pathway GOC:TermGenie down regulation of signal transduction via intracellular signaling cascade GOC:TermGenie down-regulation of intracellular signaling cascade GOC:TermGenie down-regulation of intracellular signaling pathway GOC:TermGenie down-regulation of signal transduction via intracellular signaling cascade GOC:TermGenie down-regulation of signal transmission via intracellular cascade GOC:TermGenie downregulation of intracellular signaling pathway GOC:TermGenie downregulation of signal transduction via intracellular signaling cascade GOC:TermGenie inhibition of intracellular signaling pathway GOC:TermGenie inhibition of signal transduction via intracellular signaling cascade GOC:TermGenie negative regulation of intracellular signaling pathway GOC:TermGenie negative regulation of signal transduction via intracellular signaling cascade GOC:TermGenie Any process that activates or increases the frequency, rate or extent of intracellular signal transduction. bf 2013-12-02T11:33:10Z GO:0010740 positive regulation of intracellular signaling chain up regulation of intracellular signal transduction up regulation of intracellular signaling chain up-regulation of intracellular signal transduction up-regulation of intracellular signaling chain upregulation of intracellular signal transduction upregulation of intracellular signaling chain activation of intracellular signal transduction activation of intracellular signal transduction pathway activation of intracellular signaling cascade activation of intracellular signaling chain activation of signal transmission via intracellular cascade positive regulation of intracellular protein kinase cascade positive regulation of intracellular signal transduction pathway positive regulation of signal transmission via intracellular cascade up regulation of intracellular signal transduction pathway up regulation of signal transmission via intracellular cascade up-regulation of intracellular signal transduction pathway up-regulation of signal transmission via intracellular cascade upregulation of intracellular signal transduction pathway upregulation of signal transmission via intracellular cascade biological_process activation of intracellular signaling pathway activation of signal transduction via intracellular signaling cascade positive regulation of intracellular signaling cascade positive regulation of intracellular signaling pathway positive regulation of signal transduction via intracellular signaling cascade up regulation of intracellular signaling cascade up regulation of intracellular signaling pathway up regulation of signal transduction via intracellular signaling cascade up-regulation of intracellular signaling cascade up-regulation of intracellular signaling pathway up-regulation of signal transduction via intracellular signaling cascade upregulation of intracellular signaling cascade upregulation of intracellular signaling pathway upregulation of signal transduction via intracellular signaling cascade GO:1902533 positive regulation of intracellular signal transduction GO:1902533 Any process that activates or increases the frequency, rate or extent of intracellular signal transduction. GOC:BHF GOC:TermGenie GOC:dph GOC:signaling GOC:tb positive regulation of intracellular signaling chain GOC:TermGenie up regulation of intracellular signal transduction GOC:TermGenie up regulation of intracellular signaling chain GOC:TermGenie up-regulation of intracellular signal transduction GOC:TermGenie up-regulation of intracellular signaling chain GOC:TermGenie upregulation of intracellular signal transduction GOC:TermGenie upregulation of intracellular signaling chain GOC:TermGenie activation of intracellular signal transduction GOC:TermGenie activation of intracellular signal transduction pathway GOC:TermGenie activation of intracellular signaling cascade GOC:TermGenie activation of intracellular signaling chain GOC:TermGenie activation of signal transmission via intracellular cascade GOC:TermGenie positive regulation of intracellular signal transduction pathway GOC:TermGenie positive regulation of signal transmission via intracellular cascade GOC:TermGenie up regulation of intracellular signal transduction pathway GOC:TermGenie up regulation of signal transmission via intracellular cascade GOC:TermGenie up-regulation of intracellular signal transduction pathway GOC:TermGenie up-regulation of signal transmission via intracellular cascade GOC:TermGenie upregulation of intracellular signal transduction pathway GOC:TermGenie upregulation of signal transmission via intracellular cascade GOC:TermGenie activation of intracellular signaling pathway GOC:TermGenie activation of signal transduction via intracellular signaling cascade GOC:TermGenie positive regulation of intracellular signaling cascade GOC:TermGenie positive regulation of intracellular signaling pathway GOC:TermGenie positive regulation of signal transduction via intracellular signaling cascade GOC:TermGenie up regulation of intracellular signaling cascade GOC:TermGenie up regulation of intracellular signaling pathway GOC:TermGenie up regulation of signal transduction via intracellular signaling cascade GOC:TermGenie up-regulation of intracellular signaling cascade GOC:TermGenie up-regulation of intracellular signaling pathway GOC:TermGenie up-regulation of signal transduction via intracellular signaling cascade GOC:TermGenie upregulation of intracellular signaling cascade GOC:TermGenie upregulation of intracellular signaling pathway GOC:TermGenie upregulation of signal transduction via intracellular signaling cascade GOC:TermGenie A process in which a protein is transported to, or maintained in, a location within a nucleolus. mah 2013-12-10T16:25:28Z protein localisation in nucleolus protein localisation to nucleolus protein localization in nucleolus biological_process GO:1902570 protein localization to nucleolus GO:1902570 A process in which a protein is transported to, or maintained in, a location within a nucleolus. GOC:TermGenie PMID:22809626 protein localisation in nucleolus GOC:TermGenie protein localisation to nucleolus GOC:TermGenie protein localization in nucleolus GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of RNA biosynthetic process. jl 2014-02-05T16:32:01Z down regulation of RNA anabolism down regulation of RNA biosynthesis down regulation of RNA biosynthetic process down regulation of RNA formation down regulation of RNA synthesis down-regulation of RNA anabolism down-regulation of RNA biosynthesis down-regulation of RNA biosynthetic process down-regulation of RNA formation down-regulation of RNA synthesis downregulation of RNA anabolism downregulation of RNA biosynthesis downregulation of RNA biosynthetic process downregulation of RNA formation downregulation of RNA synthesis negative regulation of RNA anabolism negative regulation of RNA biosynthesis negative regulation of RNA formation negative regulation of RNA synthesis inhibition of RNA anabolism inhibition of RNA biosynthesis inhibition of RNA biosynthetic process inhibition of RNA formation inhibition of RNA synthesis biological_process GO:1902679 negative regulation of RNA biosynthetic process GO:1902679 Any process that stops, prevents or reduces the frequency, rate or extent of RNA biosynthetic process. GO:jl GOC:TermGenie GO_REF:0000058 down regulation of RNA anabolism GOC:TermGenie down regulation of RNA biosynthesis GOC:TermGenie down regulation of RNA biosynthetic process GOC:TermGenie down regulation of RNA formation GOC:TermGenie down regulation of RNA synthesis GOC:TermGenie down-regulation of RNA anabolism GOC:TermGenie down-regulation of RNA biosynthesis GOC:TermGenie down-regulation of RNA biosynthetic process GOC:TermGenie down-regulation of RNA formation GOC:TermGenie down-regulation of RNA synthesis GOC:TermGenie downregulation of RNA anabolism GOC:TermGenie downregulation of RNA biosynthesis GOC:TermGenie downregulation of RNA biosynthetic process GOC:TermGenie downregulation of RNA formation GOC:TermGenie downregulation of RNA synthesis GOC:TermGenie negative regulation of RNA anabolism GOC:TermGenie negative regulation of RNA biosynthesis GOC:TermGenie negative regulation of RNA formation GOC:TermGenie negative regulation of RNA synthesis GOC:TermGenie inhibition of RNA anabolism GOC:TermGenie inhibition of RNA biosynthesis GOC:TermGenie inhibition of RNA biosynthetic process GOC:TermGenie inhibition of RNA formation GOC:TermGenie inhibition of RNA synthesis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of RNA biosynthetic process. jl 2014-02-05T16:32:10Z positive regulation of RNA anabolism positive regulation of RNA biosynthesis positive regulation of RNA formation positive regulation of RNA synthesis up regulation of RNA anabolism up regulation of RNA biosynthesis up regulation of RNA biosynthetic process up regulation of RNA formation up regulation of RNA synthesis up-regulation of RNA anabolism up-regulation of RNA biosynthesis up-regulation of RNA biosynthetic process up-regulation of RNA formation up-regulation of RNA synthesis upregulation of RNA anabolism upregulation of RNA biosynthesis upregulation of RNA biosynthetic process upregulation of RNA formation upregulation of RNA synthesis activation of RNA anabolism activation of RNA biosynthesis activation of RNA biosynthetic process activation of RNA formation activation of RNA synthesis biological_process GO:1902680 positive regulation of RNA biosynthetic process GO:1902680 Any process that activates or increases the frequency, rate or extent of RNA biosynthetic process. GO:jl GOC:TermGenie GO_REF:0000058 positive regulation of RNA anabolism GOC:TermGenie positive regulation of RNA biosynthesis GOC:TermGenie positive regulation of RNA formation GOC:TermGenie positive regulation of RNA synthesis GOC:TermGenie up regulation of RNA anabolism GOC:TermGenie up regulation of RNA biosynthesis GOC:TermGenie up regulation of RNA biosynthetic process GOC:TermGenie up regulation of RNA formation GOC:TermGenie up regulation of RNA synthesis GOC:TermGenie up-regulation of RNA anabolism GOC:TermGenie up-regulation of RNA biosynthesis GOC:TermGenie up-regulation of RNA biosynthetic process GOC:TermGenie up-regulation of RNA formation GOC:TermGenie up-regulation of RNA synthesis GOC:TermGenie upregulation of RNA anabolism GOC:TermGenie upregulation of RNA biosynthesis GOC:TermGenie upregulation of RNA biosynthetic process GOC:TermGenie upregulation of RNA formation GOC:TermGenie upregulation of RNA synthesis GOC:TermGenie activation of RNA anabolism GOC:TermGenie activation of RNA biosynthesis GOC:TermGenie activation of RNA biosynthetic process GOC:TermGenie activation of RNA formation GOC:TermGenie activation of RNA synthesis GOC:TermGenie Any process that modulates the frequency, rate or extent of neuroblast proliferation. rl 2014-02-18T10:03:31Z biological_process GO:1902692 regulation of neuroblast proliferation GO:1902692 Any process that modulates the frequency, rate or extent of neuroblast proliferation. GOC:PARL GOC:TermGenie GOC:rl GO_REF:0000058 PMID:21168496 Any process that modulates the rate, frequency, or extent of the process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the development of a bone. A chondrocyte is a polymorphic cell that forms cartilage. mr 2014-02-26T15:36:15Z biological_process GO:1902738 regulation of chondrocyte differentiation involved in endochondral bone morphogenesis GO:1902738 Any process that modulates the rate, frequency, or extent of the process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the development of a bone. A chondrocyte is a polymorphic cell that forms cartilage. GOC:TermGenie GO_REF:0000058 PMID:8662546 Any apoptotic process that is involved in anatomical structure development. pr 2014-02-28T13:09:43Z apoptotic cell death involved in anatomical structure development apoptotic cell death involved in development of an anatomical structure apoptotic process involved in anatomical structure development apoptotic process involved in development of an anatomical structure apoptotic programmed cell death involved in anatomical structure development apoptotic programmed cell death involved in development of an anatomical structure programmed cell death by apoptosis involved in anatomical structure development programmed cell death by apoptosis involved in development of an anatomical structure activation of apoptosis involved in anatomical structure development activation of apoptosis involved in development of an anatomical structure apoptosis involved in anatomical structure development apoptosis involved in development of an anatomical structure apoptosis signaling involved in anatomical structure development apoptosis signaling involved in development of an anatomical structure apoptotic program involved in anatomical structure development apoptotic program involved in development of an anatomical structure type I programmed cell death involved in anatomical structure development type I programmed cell death involved in development of an anatomical structure biological_process apoptosis activator activity involved in anatomical structure development apoptosis activator activity involved in development of an anatomical structure commitment to apoptosis involved in anatomical structure development commitment to apoptosis involved in development of an anatomical structure induction of apoptosis by p53 involved in anatomical structure development induction of apoptosis by p53 involved in development of an anatomical structure induction of apoptosis involved in anatomical structure development induction of apoptosis involved in development of an anatomical structure signaling (initiator) caspase activity involved in anatomical structure development signaling (initiator) caspase activity involved in development of an anatomical structure GO:1902742 apoptotic process involved in development GO:1902742 Any apoptotic process that is involved in anatomical structure development. GOC:TermGenie GOC:mtg_apoptosis GOC:pg GO_REF:0000060 apoptotic cell death involved in anatomical structure development GOC:TermGenie apoptotic cell death involved in development of an anatomical structure GOC:TermGenie apoptotic process involved in development of an anatomical structure GOC:TermGenie apoptotic programmed cell death involved in anatomical structure development GOC:TermGenie apoptotic programmed cell death involved in development of an anatomical structure GOC:TermGenie programmed cell death by apoptosis involved in anatomical structure development GOC:TermGenie programmed cell death by apoptosis involved in development of an anatomical structure GOC:TermGenie activation of apoptosis involved in anatomical structure development GOC:TermGenie activation of apoptosis involved in development of an anatomical structure GOC:TermGenie apoptosis involved in anatomical structure development GOC:TermGenie apoptosis involved in development of an anatomical structure GOC:TermGenie apoptosis signaling involved in anatomical structure development GOC:TermGenie apoptosis signaling involved in development of an anatomical structure GOC:TermGenie apoptotic program involved in anatomical structure development GOC:TermGenie apoptotic program involved in development of an anatomical structure GOC:TermGenie type I programmed cell death involved in anatomical structure development GOC:TermGenie type I programmed cell death involved in development of an anatomical structure GOC:TermGenie apoptosis activator activity involved in anatomical structure development GOC:TermGenie apoptosis activator activity involved in development of an anatomical structure GOC:TermGenie commitment to apoptosis involved in anatomical structure development GOC:TermGenie commitment to apoptosis involved in development of an anatomical structure GOC:TermGenie induction of apoptosis by p53 involved in anatomical structure development GOC:TermGenie induction of apoptosis by p53 involved in development of an anatomical structure GOC:TermGenie induction of apoptosis involved in anatomical structure development GOC:TermGenie induction of apoptosis involved in development of an anatomical structure GOC:TermGenie signaling (initiator) caspase activity involved in anatomical structure development GOC:TermGenie signaling (initiator) caspase activity involved in development of an anatomical structure GOC:TermGenie Any process that activates or increases the frequency, rate or extent of chondrocyte development. mr 2014-03-07T17:45:55Z up regulation of chondrocyte development up-regulation of chondrocyte development upregulation of chondrocyte development activation of chondrocyte development biological_process GO:1902761 positive regulation of chondrocyte development GO:1902761 Any process that activates or increases the frequency, rate or extent of chondrocyte development. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:16575901 up regulation of chondrocyte development GOC:TermGenie up-regulation of chondrocyte development GOC:TermGenie upregulation of chondrocyte development GOC:TermGenie activation of chondrocyte development GOC:TermGenie Any process that modulates the frequency, rate or extent of skeletal muscle fiber differentiation. mr 2014-03-26T21:18:26Z biological_process GO:1902809 regulation of skeletal muscle fiber differentiation GO:1902809 Any process that modulates the frequency, rate or extent of skeletal muscle fiber differentiation. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:17879321 Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle fiber differentiation. mr 2014-03-26T21:18:32Z down regulation of skeletal muscle fiber differentiation down-regulation of skeletal muscle fiber differentiation downregulation of skeletal muscle fiber differentiation inhibition of skeletal muscle fiber differentiation biological_process GO:1902810 negative regulation of skeletal muscle fiber differentiation GO:1902810 Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle fiber differentiation. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:17879321 down regulation of skeletal muscle fiber differentiation GOC:TermGenie down-regulation of skeletal muscle fiber differentiation GOC:TermGenie downregulation of skeletal muscle fiber differentiation GOC:TermGenie inhibition of skeletal muscle fiber differentiation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of skeletal muscle fiber differentiation. mr 2014-03-26T21:18:38Z up regulation of skeletal muscle fiber differentiation up-regulation of skeletal muscle fiber differentiation upregulation of skeletal muscle fiber differentiation activation of skeletal muscle fiber differentiation biological_process GO:1902811 positive regulation of skeletal muscle fiber differentiation GO:1902811 Any process that activates or increases the frequency, rate or extent of skeletal muscle fiber differentiation. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:17879321 up regulation of skeletal muscle fiber differentiation GOC:TermGenie up-regulation of skeletal muscle fiber differentiation GOC:TermGenie upregulation of skeletal muscle fiber differentiation GOC:TermGenie activation of skeletal muscle fiber differentiation GOC:TermGenie Any process that modulates the frequency, rate or extent of protein localization to microtubule. tb 2014-03-27T22:07:12Z regulation of protein localisation to microtubule biological_process GO:1902816 regulation of protein localization to microtubule GO:1902816 Any process that modulates the frequency, rate or extent of protein localization to microtubule. GOC:TermGenie GOC:vw GO_REF:0000058 PMID:23087209 regulation of protein localisation to microtubule GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to microtubule. tb 2014-03-27T22:07:18Z down regulation of protein localisation to microtubule down regulation of protein localization to microtubule down-regulation of protein localisation to microtubule down-regulation of protein localization to microtubule downregulation of protein localisation to microtubule downregulation of protein localization to microtubule negative regulation of protein localisation to microtubule inhibition of protein localisation to microtubule inhibition of protein localization to microtubule biological_process GO:1902817 negative regulation of protein localization to microtubule GO:1902817 Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to microtubule. GOC:TermGenie GOC:vw GO_REF:0000058 PMID:23087209 down regulation of protein localisation to microtubule GOC:TermGenie down regulation of protein localization to microtubule GOC:TermGenie down-regulation of protein localisation to microtubule GOC:TermGenie down-regulation of protein localization to microtubule GOC:TermGenie downregulation of protein localisation to microtubule GOC:TermGenie downregulation of protein localization to microtubule GOC:TermGenie negative regulation of protein localisation to microtubule GOC:TermGenie inhibition of protein localisation to microtubule GOC:TermGenie inhibition of protein localization to microtubule GOC:TermGenie Any process that modulates the frequency, rate or extent of nuclear migration along microtubule. vw 2014-04-01T13:50:23Z regulation of nuclear movement, microtubule-mediated regulation of nucleus migration regulation of microtubule cytoskeleton-dependent nuclear positioning regulation of microtubule cytoskeleton-dependent nucleus positioning regulation of microtubule-dependent nuclear positioning regulation of microtubule-dependent nucleus positioning regulation of microtubule-mediated nuclear migration regulation of nuclear migration, microtubule-mediated regulation of transport of nucleus by microtubules regulation of transport of nucleus, microtubule-mediated biological_process GO:1902838 regulation of nuclear migration along microtubule GO:1902838 Any process that modulates the frequency, rate or extent of nuclear migration along microtubule. GOC:TermGenie GO_REF:0000058 PMID:23087209 regulation of nuclear movement, microtubule-mediated GOC:TermGenie regulation of nucleus migration GOC:TermGenie regulation of microtubule cytoskeleton-dependent nuclear positioning GOC:TermGenie regulation of microtubule cytoskeleton-dependent nucleus positioning GOC:TermGenie regulation of microtubule-dependent nuclear positioning GOC:TermGenie regulation of microtubule-dependent nucleus positioning GOC:TermGenie regulation of microtubule-mediated nuclear migration GOC:TermGenie regulation of nuclear migration, microtubule-mediated GOC:TermGenie regulation of transport of nucleus by microtubules GOC:TermGenie regulation of transport of nucleus, microtubule-mediated GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of nuclear migration along microtubule. vw 2014-04-01T13:50:29Z down regulation of microtubule cytoskeleton-dependent nuclear positioning down regulation of microtubule cytoskeleton-dependent nucleus positioning down regulation of microtubule-dependent nuclear positioning down regulation of microtubule-dependent nucleus positioning down regulation of microtubule-mediated nuclear migration down regulation of nuclear migration along microtubule down regulation of nuclear migration, microtubule-mediated down regulation of transport of nucleus by microtubules down regulation of transport of nucleus, microtubule-mediated down-regulation of microtubule cytoskeleton-dependent nuclear positioning down-regulation of microtubule cytoskeleton-dependent nucleus positioning down-regulation of microtubule-dependent nuclear positioning down-regulation of microtubule-dependent nucleus positioning down-regulation of microtubule-mediated nuclear migration down-regulation of nuclear migration along microtubule down-regulation of nuclear migration, microtubule-mediated down-regulation of transport of nucleus by microtubules down-regulation of transport of nucleus, microtubule-mediated downregulation of microtubule cytoskeleton-dependent nuclear positioning downregulation of microtubule cytoskeleton-dependent nucleus positioning downregulation of microtubule-dependent nuclear positioning downregulation of microtubule-dependent nucleus positioning downregulation of microtubule-mediated nuclear migration downregulation of nuclear migration along microtubule downregulation of nuclear migration, microtubule-mediated downregulation of transport of nucleus by microtubules downregulation of transport of nucleus, microtubule-mediated negative regulation of microtubule cytoskeleton-dependent nuclear positioning negative regulation of microtubule cytoskeleton-dependent nucleus positioning negative regulation of microtubule-dependent nuclear positioning negative regulation of microtubule-dependent nucleus positioning negative regulation of microtubule-mediated nuclear migration negative regulation of nuclear migration, microtubule-mediated negative regulation of transport of nucleus by microtubules negative regulation of transport of nucleus, microtubule-mediated inhibition of microtubule cytoskeleton-dependent nuclear positioning inhibition of microtubule cytoskeleton-dependent nucleus positioning inhibition of microtubule-dependent nuclear positioning inhibition of microtubule-dependent nucleus positioning inhibition of microtubule-mediated nuclear migration inhibition of nuclear migration along microtubule inhibition of nuclear migration, microtubule-mediated inhibition of transport of nucleus by microtubules inhibition of transport of nucleus, microtubule-mediated biological_process GO:1902839 negative regulation of nuclear migration along microtubule GO:1902839 Any process that stops, prevents or reduces the frequency, rate or extent of nuclear migration along microtubule. GOC:TermGenie GO_REF:0000058 PMID:23087209 down regulation of microtubule cytoskeleton-dependent nuclear positioning GOC:TermGenie down regulation of microtubule cytoskeleton-dependent nucleus positioning GOC:TermGenie down regulation of microtubule-dependent nuclear positioning GOC:TermGenie down regulation of microtubule-dependent nucleus positioning GOC:TermGenie down regulation of microtubule-mediated nuclear migration GOC:TermGenie down regulation of nuclear migration along microtubule GOC:TermGenie down regulation of nuclear migration, microtubule-mediated GOC:TermGenie down regulation of transport of nucleus by microtubules GOC:TermGenie down regulation of transport of nucleus, microtubule-mediated GOC:TermGenie down-regulation of microtubule cytoskeleton-dependent nuclear positioning GOC:TermGenie down-regulation of microtubule cytoskeleton-dependent nucleus positioning GOC:TermGenie down-regulation of microtubule-dependent nuclear positioning GOC:TermGenie down-regulation of microtubule-dependent nucleus positioning GOC:TermGenie down-regulation of microtubule-mediated nuclear migration GOC:TermGenie down-regulation of nuclear migration along microtubule GOC:TermGenie down-regulation of nuclear migration, microtubule-mediated GOC:TermGenie down-regulation of transport of nucleus by microtubules GOC:TermGenie down-regulation of transport of nucleus, microtubule-mediated GOC:TermGenie downregulation of microtubule cytoskeleton-dependent nuclear positioning GOC:TermGenie downregulation of microtubule cytoskeleton-dependent nucleus positioning GOC:TermGenie downregulation of microtubule-dependent nuclear positioning GOC:TermGenie downregulation of microtubule-dependent nucleus positioning GOC:TermGenie downregulation of microtubule-mediated nuclear migration GOC:TermGenie downregulation of nuclear migration along microtubule GOC:TermGenie downregulation of nuclear migration, microtubule-mediated GOC:TermGenie downregulation of transport of nucleus by microtubules GOC:TermGenie downregulation of transport of nucleus, microtubule-mediated GOC:TermGenie negative regulation of microtubule cytoskeleton-dependent nuclear positioning GOC:TermGenie negative regulation of microtubule cytoskeleton-dependent nucleus positioning GOC:TermGenie negative regulation of microtubule-dependent nuclear positioning GOC:TermGenie negative regulation of microtubule-dependent nucleus positioning GOC:TermGenie negative regulation of microtubule-mediated nuclear migration GOC:TermGenie negative regulation of nuclear migration, microtubule-mediated GOC:TermGenie negative regulation of transport of nucleus by microtubules GOC:TermGenie negative regulation of transport of nucleus, microtubule-mediated GOC:TermGenie inhibition of microtubule cytoskeleton-dependent nuclear positioning GOC:TermGenie inhibition of microtubule cytoskeleton-dependent nucleus positioning GOC:TermGenie inhibition of microtubule-dependent nuclear positioning GOC:TermGenie inhibition of microtubule-dependent nucleus positioning GOC:TermGenie inhibition of microtubule-mediated nuclear migration GOC:TermGenie inhibition of nuclear migration along microtubule GOC:TermGenie inhibition of nuclear migration, microtubule-mediated GOC:TermGenie inhibition of transport of nucleus by microtubules GOC:TermGenie inhibition of transport of nucleus, microtubule-mediated GOC:TermGenie Any process that activates or increases the frequency, rate or extent of nuclear migration along microtubule. vw 2014-04-01T13:50:35Z positive regulation of microtubule cytoskeleton-dependent nuclear positioning positive regulation of microtubule cytoskeleton-dependent nucleus positioning positive regulation of microtubule-dependent nuclear positioning positive regulation of microtubule-dependent nucleus positioning positive regulation of microtubule-mediated nuclear migration positive regulation of nuclear migration, microtubule-mediated positive regulation of transport of nucleus by microtubules positive regulation of transport of nucleus, microtubule-mediated up regulation of microtubule cytoskeleton-dependent nuclear positioning up regulation of microtubule cytoskeleton-dependent nucleus positioning up regulation of microtubule-dependent nuclear positioning up regulation of microtubule-dependent nucleus positioning up regulation of microtubule-mediated nuclear migration up regulation of nuclear migration along microtubule up regulation of nuclear migration, microtubule-mediated up regulation of transport of nucleus by microtubules up regulation of transport of nucleus, microtubule-mediated up-regulation of microtubule cytoskeleton-dependent nuclear positioning up-regulation of microtubule cytoskeleton-dependent nucleus positioning up-regulation of microtubule-dependent nuclear positioning up-regulation of microtubule-dependent nucleus positioning up-regulation of microtubule-mediated nuclear migration up-regulation of nuclear migration along microtubule up-regulation of nuclear migration, microtubule-mediated up-regulation of transport of nucleus by microtubules up-regulation of transport of nucleus, microtubule-mediated upregulation of microtubule cytoskeleton-dependent nuclear positioning upregulation of microtubule cytoskeleton-dependent nucleus positioning upregulation of microtubule-dependent nuclear positioning upregulation of microtubule-dependent nucleus positioning upregulation of microtubule-mediated nuclear migration upregulation of nuclear migration along microtubule upregulation of nuclear migration, microtubule-mediated upregulation of transport of nucleus by microtubules upregulation of transport of nucleus, microtubule-mediated activation of microtubule cytoskeleton-dependent nuclear positioning activation of microtubule cytoskeleton-dependent nucleus positioning activation of microtubule-dependent nuclear positioning activation of microtubule-dependent nucleus positioning activation of microtubule-mediated nuclear migration activation of nuclear migration along microtubule activation of nuclear migration, microtubule-mediated activation of transport of nucleus by microtubules activation of transport of nucleus, microtubule-mediated biological_process GO:1902840 positive regulation of nuclear migration along microtubule GO:1902840 Any process that activates or increases the frequency, rate or extent of nuclear migration along microtubule. GOC:TermGenie GO_REF:0000058 PMID:23087209 positive regulation of microtubule cytoskeleton-dependent nuclear positioning GOC:TermGenie positive regulation of microtubule cytoskeleton-dependent nucleus positioning GOC:TermGenie positive regulation of microtubule-dependent nuclear positioning GOC:TermGenie positive regulation of microtubule-dependent nucleus positioning GOC:TermGenie positive regulation of microtubule-mediated nuclear migration GOC:TermGenie positive regulation of nuclear migration, microtubule-mediated GOC:TermGenie positive regulation of transport of nucleus by microtubules GOC:TermGenie positive regulation of transport of nucleus, microtubule-mediated GOC:TermGenie up regulation of microtubule cytoskeleton-dependent nuclear positioning GOC:TermGenie up regulation of microtubule cytoskeleton-dependent nucleus positioning GOC:TermGenie up regulation of microtubule-dependent nuclear positioning GOC:TermGenie up regulation of microtubule-dependent nucleus positioning GOC:TermGenie up regulation of microtubule-mediated nuclear migration GOC:TermGenie up regulation of nuclear migration along microtubule GOC:TermGenie up regulation of nuclear migration, microtubule-mediated GOC:TermGenie up regulation of transport of nucleus by microtubules GOC:TermGenie up regulation of transport of nucleus, microtubule-mediated GOC:TermGenie up-regulation of microtubule cytoskeleton-dependent nuclear positioning GOC:TermGenie up-regulation of microtubule cytoskeleton-dependent nucleus positioning GOC:TermGenie up-regulation of microtubule-dependent nuclear positioning GOC:TermGenie up-regulation of microtubule-dependent nucleus positioning GOC:TermGenie up-regulation of microtubule-mediated nuclear migration GOC:TermGenie up-regulation of nuclear migration along microtubule GOC:TermGenie up-regulation of nuclear migration, microtubule-mediated GOC:TermGenie up-regulation of transport of nucleus by microtubules GOC:TermGenie up-regulation of transport of nucleus, microtubule-mediated GOC:TermGenie upregulation of microtubule cytoskeleton-dependent nuclear positioning GOC:TermGenie upregulation of microtubule cytoskeleton-dependent nucleus positioning GOC:TermGenie upregulation of microtubule-dependent nuclear positioning GOC:TermGenie upregulation of microtubule-dependent nucleus positioning GOC:TermGenie upregulation of microtubule-mediated nuclear migration GOC:TermGenie upregulation of nuclear migration along microtubule GOC:TermGenie upregulation of nuclear migration, microtubule-mediated GOC:TermGenie upregulation of transport of nucleus by microtubules GOC:TermGenie upregulation of transport of nucleus, microtubule-mediated GOC:TermGenie activation of microtubule cytoskeleton-dependent nuclear positioning GOC:TermGenie activation of microtubule cytoskeleton-dependent nucleus positioning GOC:TermGenie activation of microtubule-dependent nuclear positioning GOC:TermGenie activation of microtubule-dependent nucleus positioning GOC:TermGenie activation of microtubule-mediated nuclear migration GOC:TermGenie activation of nuclear migration along microtubule GOC:TermGenie activation of nuclear migration, microtubule-mediated GOC:TermGenie activation of transport of nucleus by microtubules GOC:TermGenie activation of transport of nucleus, microtubule-mediated GOC:TermGenie Any microtubule cytoskeleton organization that is involved in mitosis. vw 2014-04-02T14:19:38Z microtubule cytoskeleton organisation involved in mitosis microtubule dynamics involved in mitosis biological_process microtubule cytoskeleton organization and biogenesis involved in mitosis GO:1902850 microtubule cytoskeleton organization involved in mitosis GO:1902850 Any microtubule cytoskeleton organization that is involved in mitosis. GOC:TermGenie GO_REF:0000060 PMID:18799626 microtubule cytoskeleton organisation involved in mitosis GOC:TermGenie microtubule dynamics involved in mitosis GOC:TermGenie microtubule cytoskeleton organization and biogenesis involved in mitosis GOC:TermGenie Any process that modulates the frequency, rate or extent of embryonic camera-type eye development. mr 2014-04-03T15:24:00Z regulation of embryonic eye development biological_process GO:1902863 regulation of embryonic camera-type eye development GO:1902863 Any process that modulates the frequency, rate or extent of embryonic camera-type eye development. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:16872597 regulation of embryonic eye development GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of embryonic camera-type eye development. mr 2014-04-03T15:24:06Z down regulation of embryonic camera-type eye development down regulation of embryonic eye development down-regulation of embryonic camera-type eye development down-regulation of embryonic eye development downregulation of embryonic camera-type eye development downregulation of embryonic eye development negative regulation of embryonic eye development inhibition of embryonic camera-type eye development inhibition of embryonic eye development biological_process GO:1902864 negative regulation of embryonic camera-type eye development GO:1902864 Any process that stops, prevents or reduces the frequency, rate or extent of embryonic camera-type eye development. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:16872597 down regulation of embryonic camera-type eye development GOC:TermGenie down regulation of embryonic eye development GOC:TermGenie down-regulation of embryonic camera-type eye development GOC:TermGenie down-regulation of embryonic eye development GOC:TermGenie downregulation of embryonic camera-type eye development GOC:TermGenie downregulation of embryonic eye development GOC:TermGenie negative regulation of embryonic eye development GOC:TermGenie inhibition of embryonic camera-type eye development GOC:TermGenie inhibition of embryonic eye development GOC:TermGenie Any process that activates or increases the frequency, rate or extent of embryonic camera-type eye development. mr 2014-04-03T15:24:12Z positive regulation of embryonic eye development up regulation of embryonic camera-type eye development up regulation of embryonic eye development up-regulation of embryonic camera-type eye development up-regulation of embryonic eye development upregulation of embryonic camera-type eye development upregulation of embryonic eye development activation of embryonic camera-type eye development activation of embryonic eye development biological_process GO:1902865 positive regulation of embryonic camera-type eye development GO:1902865 Any process that activates or increases the frequency, rate or extent of embryonic camera-type eye development. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:16872597 positive regulation of embryonic eye development GOC:TermGenie up regulation of embryonic camera-type eye development GOC:TermGenie up regulation of embryonic eye development GOC:TermGenie up-regulation of embryonic camera-type eye development GOC:TermGenie up-regulation of embryonic eye development GOC:TermGenie upregulation of embryonic camera-type eye development GOC:TermGenie upregulation of embryonic eye development GOC:TermGenie activation of embryonic camera-type eye development GOC:TermGenie activation of embryonic eye development GOC:TermGenie Any process that modulates the frequency, rate or extent of retina development in camera-type eye. mr 2014-04-03T15:24:17Z regulation of retina development in camera-style eye biological_process regulation of retinal development GO:1902866 regulation of retina development in camera-type eye GO:1902866 Any process that modulates the frequency, rate or extent of retina development in camera-type eye. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:16872597 regulation of retina development in camera-style eye GOC:TermGenie regulation of retinal development GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of retina development in camera-type eye. mr 2014-04-03T15:24:23Z down regulation of retina development in camera-style eye down regulation of retina development in camera-type eye down-regulation of retina development in camera-style eye down-regulation of retina development in camera-type eye downregulation of retina development in camera-style eye downregulation of retina development in camera-type eye negative regulation of retina development in camera-style eye inhibition of retina development in camera-style eye inhibition of retina development in camera-type eye biological_process down regulation of retinal development down-regulation of retinal development downregulation of retinal development inhibition of retinal development negative regulation of retinal development GO:1902867 negative regulation of retina development in camera-type eye GO:1902867 Any process that stops, prevents or reduces the frequency, rate or extent of retina development in camera-type eye. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:16872597 down regulation of retina development in camera-style eye GOC:TermGenie down regulation of retina development in camera-type eye GOC:TermGenie down-regulation of retina development in camera-style eye GOC:TermGenie down-regulation of retina development in camera-type eye GOC:TermGenie downregulation of retina development in camera-style eye GOC:TermGenie downregulation of retina development in camera-type eye GOC:TermGenie negative regulation of retina development in camera-style eye GOC:TermGenie inhibition of retina development in camera-style eye GOC:TermGenie inhibition of retina development in camera-type eye GOC:TermGenie down regulation of retinal development GOC:TermGenie down-regulation of retinal development GOC:TermGenie downregulation of retinal development GOC:TermGenie inhibition of retinal development GOC:TermGenie negative regulation of retinal development GOC:TermGenie Any process that activates or increases the frequency, rate or extent of retina development in camera-type eye. mr 2014-04-03T15:24:29Z positive regulation of retina development in camera-style eye up regulation of retina development in camera-style eye up regulation of retina development in camera-type eye up-regulation of retina development in camera-style eye up-regulation of retina development in camera-type eye upregulation of retina development in camera-style eye upregulation of retina development in camera-type eye activation of retina development in camera-style eye activation of retina development in camera-type eye biological_process activation of retinal development positive regulation of retinal development up regulation of retinal development up-regulation of retinal development upregulation of retinal development GO:1902868 positive regulation of retina development in camera-type eye GO:1902868 Any process that activates or increases the frequency, rate or extent of retina development in camera-type eye. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:16872597 positive regulation of retina development in camera-style eye GOC:TermGenie up regulation of retina development in camera-style eye GOC:TermGenie up regulation of retina development in camera-type eye GOC:TermGenie up-regulation of retina development in camera-style eye GOC:TermGenie up-regulation of retina development in camera-type eye GOC:TermGenie upregulation of retina development in camera-style eye GOC:TermGenie upregulation of retina development in camera-type eye GOC:TermGenie activation of retina development in camera-style eye GOC:TermGenie activation of retina development in camera-type eye GOC:TermGenie activation of retinal development GOC:TermGenie positive regulation of retinal development GOC:TermGenie up regulation of retinal development GOC:TermGenie up-regulation of retinal development GOC:TermGenie upregulation of retinal development GOC:TermGenie Any process that modulates the frequency, rate or extent of embryonic pattern specification. mr 2014-04-03T15:25:15Z regulation of embryonic pattern biosynthesis regulation of embryonic pattern formation biological_process regulation of ventral/lateral system GO:1902875 regulation of embryonic pattern specification GO:1902875 Any process that modulates the frequency, rate or extent of embryonic pattern specification. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:16872597 regulation of embryonic pattern biosynthesis GOC:TermGenie regulation of embryonic pattern formation GOC:TermGenie regulation of ventral/lateral system GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of embryonic pattern specification. mr 2014-04-03T15:25:20Z down regulation of embryonic pattern specification down-regulation of embryonic pattern specification downregulation of embryonic pattern specification inhibition of embryonic pattern specification biological_process down regulation of ventral/lateral system down-regulation of ventral/lateral system downregulation of ventral/lateral system inhibition of ventral/lateral system negative regulation of ventral/lateral system GO:1902876 negative regulation of embryonic pattern specification GO:1902876 Any process that stops, prevents or reduces the frequency, rate or extent of embryonic pattern specification. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:16872597 down regulation of embryonic pattern specification GOC:TermGenie down-regulation of embryonic pattern specification GOC:TermGenie downregulation of embryonic pattern specification GOC:TermGenie inhibition of embryonic pattern specification GOC:TermGenie down regulation of ventral/lateral system GOC:TermGenie down-regulation of ventral/lateral system GOC:TermGenie downregulation of ventral/lateral system GOC:TermGenie inhibition of ventral/lateral system GOC:TermGenie negative regulation of ventral/lateral system GOC:TermGenie Any process that activates or increases the frequency, rate or extent of embryonic pattern specification. mr 2014-04-03T15:25:26Z up regulation of embryonic pattern specification up-regulation of embryonic pattern specification upregulation of embryonic pattern specification activation of embryonic pattern specification biological_process activation of ventral/lateral system positive regulation of ventral/lateral system up regulation of ventral/lateral system up-regulation of ventral/lateral system upregulation of ventral/lateral system GO:1902877 positive regulation of embryonic pattern specification GO:1902877 Any process that activates or increases the frequency, rate or extent of embryonic pattern specification. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:16872597 up regulation of embryonic pattern specification GOC:TermGenie up-regulation of embryonic pattern specification GOC:TermGenie upregulation of embryonic pattern specification GOC:TermGenie activation of embryonic pattern specification GOC:TermGenie activation of ventral/lateral system GOC:TermGenie positive regulation of ventral/lateral system GOC:TermGenie up regulation of ventral/lateral system GOC:TermGenie up-regulation of ventral/lateral system GOC:TermGenie upregulation of ventral/lateral system GOC:TermGenie Any process that modulates the frequency, rate or extent of supramolecular fiber organization. rl 2014-04-15T16:46:36Z biological_process regulation of fibril organisation GO:1902903 HSPA8, human, P11142 in PMID:23921388 inferred from direct assay to negatively regulate fibrillation of alpha-Syn in vitro regulation of supramolecular fiber organization GO:1902903 Any process that modulates the frequency, rate or extent of supramolecular fiber organization. GOC:PARL GOC:TermGenie GOC:rl GO_REF:0000058 PMID:23921388 regulation of fibril organisation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of fibril organization. rl 2014-04-15T16:46:42Z inhibition of fibril organisation inhibition of fibril organization biological_process down regulation of fibril organisation down regulation of fibril organization down-regulation of fibril organisation down-regulation of fibril organization downregulation of fibril organisation downregulation of fibril organization negative regulation of fibril organisation GO:1902904 HSPA8, human, P11142 in PMID:23921388 inferred from direct assay to negatively regulate fibrillation of alpha-Syn in vitro negative regulation of supramolecular fiber organization GO:1902904 Any process that stops, prevents or reduces the frequency, rate or extent of fibril organization. GOC:PARL GOC:TermGenie GOC:rl GO_REF:0000058 PMID:23921388 inhibition of fibril organisation GOC:TermGenie inhibition of fibril organization GOC:TermGenie down regulation of fibril organisation GOC:TermGenie down regulation of fibril organization GOC:TermGenie down-regulation of fibril organisation GOC:TermGenie down-regulation of fibril organization GOC:TermGenie downregulation of fibril organisation GOC:TermGenie downregulation of fibril organization GOC:TermGenie negative regulation of fibril organisation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of supramolecular fiber organization. rl 2014-04-15T16:46:48Z activation of fibril organisation activation of fibril organization biological_process positive regulation of fibril organisation up regulation of fibril organisation up regulation of fibril organization up-regulation of fibril organisation up-regulation of fibril organization upregulation of fibril organisation upregulation of fibril organization GO:1902905 HSPA8, human, P11142 in PMID:23921388 inferred from direct assay to negatively regulate fibrillation of alpha-Syn in vitro positive regulation of supramolecular fiber organization GO:1902905 Any process that activates or increases the frequency, rate or extent of supramolecular fiber organization. GOC:PARL GOC:TermGenie GOC:rl GO_REF:0000058 PMID:23921388 activation of fibril organisation GOC:TermGenie activation of fibril organization GOC:TermGenie positive regulation of fibril organisation GOC:TermGenie up regulation of fibril organisation GOC:TermGenie up regulation of fibril organization GOC:TermGenie up-regulation of fibril organisation GOC:TermGenie up-regulation of fibril organization GOC:TermGenie upregulation of fibril organisation GOC:TermGenie upregulation of fibril organization GOC:TermGenie Any process that activates or increases the frequency, rate or extent of neuroepithelial cell differentiation. mr 2014-04-18T21:06:42Z up regulation of neuroepithelial cell differentiation up-regulation of neuroepithelial cell differentiation upregulation of neuroepithelial cell differentiation activation of neuroepithelial cell differentiation biological_process GO:1902913 positive regulation of neuroepithelial cell differentiation GO:1902913 Any process that activates or increases the frequency, rate or extent of neuroepithelial cell differentiation. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:16916506 up regulation of neuroepithelial cell differentiation GOC:TermGenie up-regulation of neuroepithelial cell differentiation GOC:TermGenie upregulation of neuroepithelial cell differentiation GOC:TermGenie activation of neuroepithelial cell differentiation GOC:TermGenie The disaggregation of an organelle into its constituent components. jl 2014-05-13T12:36:03Z organelle degradation biological_process GO:1903008 organelle disassembly GO:1903008 The disaggregation of an organelle into its constituent components. GOC:TermGenie GO_REF:0000079 Any process that modulates the frequency, rate or extent of bone development. mr 2014-05-13T22:41:53Z biological_process GO:1903010 regulation of bone development GO:1903010 Any process that modulates the frequency, rate or extent of bone development. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:22510437 Any process that stops, prevents or reduces the frequency, rate or extent of bone development. mr 2014-05-13T22:42:00Z down regulation of bone development down-regulation of bone development downregulation of bone development inhibition of bone development biological_process GO:1903011 negative regulation of bone development GO:1903011 Any process that stops, prevents or reduces the frequency, rate or extent of bone development. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:22510437 down regulation of bone development GOC:TermGenie down-regulation of bone development GOC:TermGenie downregulation of bone development GOC:TermGenie inhibition of bone development GOC:TermGenie Any process that activates or increases the frequency, rate or extent of bone development. mr 2014-05-13T22:42:06Z up regulation of bone development up-regulation of bone development upregulation of bone development activation of bone development biological_process GO:1903012 positive regulation of bone development GO:1903012 Any process that activates or increases the frequency, rate or extent of bone development. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:22510437 up regulation of bone development GOC:TermGenie up-regulation of bone development GOC:TermGenie upregulation of bone development GOC:TermGenie activation of bone development GOC:TermGenie Any process that modulates the frequency, rate or extent of glycoprotein metabolic process. rl 2014-05-14T18:44:19Z regulation of glycoprotein metabolism biological_process GO:1903018 human serum amyloid P component (SAP) P02743 inhibits viral neuraminidase, NA (exo-alpha-sialidase activity) and thus the metabolism of glycoproteins, demonstrated in Figure 4A PMID:23544079, (IDA), the negative regulation term would be applied to this protein regulation of glycoprotein metabolic process GO:1903018 Any process that modulates the frequency, rate or extent of glycoprotein metabolic process. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:23544079 regulation of glycoprotein metabolism GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of glycoprotein metabolic process. rl 2014-05-14T18:44:25Z down regulation of glycoprotein metabolic process down regulation of glycoprotein metabolism down-regulation of glycoprotein metabolic process down-regulation of glycoprotein metabolism downregulation of glycoprotein metabolic process downregulation of glycoprotein metabolism negative regulation of glycoprotein metabolism inhibition of glycoprotein metabolic process inhibition of glycoprotein metabolism biological_process GO:1903019 human serum amyloid P component (SAP) P02743 inhibits viral neuraminidase, NA (exo-alpha-sialidase activity) and thus the metabolism of glycoproteins, demonstrated in Figure 4A PMID:23544079, (IDA), the negative regulation term would be applied to this protein negative regulation of glycoprotein metabolic process GO:1903019 Any process that stops, prevents or reduces the frequency, rate or extent of glycoprotein metabolic process. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:23544079 down regulation of glycoprotein metabolic process GOC:TermGenie down regulation of glycoprotein metabolism GOC:TermGenie down-regulation of glycoprotein metabolic process GOC:TermGenie down-regulation of glycoprotein metabolism GOC:TermGenie downregulation of glycoprotein metabolic process GOC:TermGenie downregulation of glycoprotein metabolism GOC:TermGenie negative regulation of glycoprotein metabolism GOC:TermGenie inhibition of glycoprotein metabolic process GOC:TermGenie inhibition of glycoprotein metabolism GOC:TermGenie Any process that activates or increases the frequency, rate or extent of glycoprotein metabolic process. rl 2014-05-14T18:44:31Z positive regulation of glycoprotein metabolism up regulation of glycoprotein metabolic process up regulation of glycoprotein metabolism up-regulation of glycoprotein metabolic process up-regulation of glycoprotein metabolism upregulation of glycoprotein metabolic process upregulation of glycoprotein metabolism activation of glycoprotein metabolic process activation of glycoprotein metabolism biological_process GO:1903020 human serum amyloid P component (SAP) P02743 inhibits viral neuraminidase, NA (exo-alpha-sialidase activity) and thus the metabolism of glycoproteins, demonstrated in Figure 4A PMID:23544079, (IDA), the negative regulation term would be applied to this protein positive regulation of glycoprotein metabolic process GO:1903020 Any process that activates or increases the frequency, rate or extent of glycoprotein metabolic process. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:23544079 positive regulation of glycoprotein metabolism GOC:TermGenie up regulation of glycoprotein metabolic process GOC:TermGenie up regulation of glycoprotein metabolism GOC:TermGenie up-regulation of glycoprotein metabolic process GOC:TermGenie up-regulation of glycoprotein metabolism GOC:TermGenie upregulation of glycoprotein metabolic process GOC:TermGenie upregulation of glycoprotein metabolism GOC:TermGenie activation of glycoprotein metabolic process GOC:TermGenie activation of glycoprotein metabolism GOC:TermGenie Any neural crest cell migration that is involved in sympathetic nervous system development. rl 2014-05-22T07:06:02Z biological_process GO:1903045 Sema3a (O08665, mouse) is involved in neural crest cell migration involved in sympathetic nervous system development neural crest cell migration involved in sympathetic nervous system development GO:1903045 Any neural crest cell migration that is involved in sympathetic nervous system development. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000060 PMID:19325129 A process that is part of the meiotic cell cycle. jl 2014-05-22T14:22:28Z biological_process GO:1903046 meiotic cell cycle process GO:1903046 A process that is part of the meiotic cell cycle. GOC:TermGenie GOC:mtg_cell_cycle GO_REF:0000060 A process that is part of the mitotic cell cycle. jl 2014-05-22T14:22:34Z biological_process GO:1903047 mitotic cell cycle process GO:1903047 A process that is part of the mitotic cell cycle. GOC:TermGenie GOC:mtg_cell_cycle GO_REF:0000060 Any process that modulates the frequency, rate or extent of extracellular matrix organization. rl 2014-05-23T17:15:41Z regulation of extracellular matrix organisation biological_process regulation of extracellular matrix organization and biogenesis GO:1903053 regulation of extracellular matrix organization GO:1903053 Any process that modulates the frequency, rate or extent of extracellular matrix organization. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:22357537 regulation of extracellular matrix organisation GOC:TermGenie regulation of extracellular matrix organization and biogenesis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of extracellular matrix organization. rl 2014-05-23T17:15:47Z down regulation of extracellular matrix organisation down regulation of extracellular matrix organization down-regulation of extracellular matrix organisation down-regulation of extracellular matrix organization downregulation of extracellular matrix organisation downregulation of extracellular matrix organization negative regulation of extracellular matrix organisation inhibition of extracellular matrix organisation inhibition of extracellular matrix organization biological_process down regulation of extracellular matrix organization and biogenesis down-regulation of extracellular matrix organization and biogenesis downregulation of extracellular matrix organization and biogenesis inhibition of extracellular matrix organization and biogenesis negative regulation of extracellular matrix organization and biogenesis GO:1903054 negative regulation of extracellular matrix organization GO:1903054 Any process that stops, prevents or reduces the frequency, rate or extent of extracellular matrix organization. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:22357537 down regulation of extracellular matrix organisation GOC:TermGenie down regulation of extracellular matrix organization GOC:TermGenie down-regulation of extracellular matrix organisation GOC:TermGenie down-regulation of extracellular matrix organization GOC:TermGenie downregulation of extracellular matrix organisation GOC:TermGenie downregulation of extracellular matrix organization GOC:TermGenie negative regulation of extracellular matrix organisation GOC:TermGenie inhibition of extracellular matrix organisation GOC:TermGenie inhibition of extracellular matrix organization GOC:TermGenie down regulation of extracellular matrix organization and biogenesis GOC:TermGenie down-regulation of extracellular matrix organization and biogenesis GOC:TermGenie downregulation of extracellular matrix organization and biogenesis GOC:TermGenie inhibition of extracellular matrix organization and biogenesis GOC:TermGenie negative regulation of extracellular matrix organization and biogenesis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of extracellular matrix organization. rl 2014-05-23T17:15:53Z positive regulation of extracellular matrix organisation up regulation of extracellular matrix organisation up regulation of extracellular matrix organization up-regulation of extracellular matrix organisation up-regulation of extracellular matrix organization upregulation of extracellular matrix organisation upregulation of extracellular matrix organization activation of extracellular matrix organisation activation of extracellular matrix organization biological_process activation of extracellular matrix organization and biogenesis positive regulation of extracellular matrix organization and biogenesis up regulation of extracellular matrix organization and biogenesis up-regulation of extracellular matrix organization and biogenesis upregulation of extracellular matrix organization and biogenesis GO:1903055 positive regulation of extracellular matrix organization GO:1903055 Any process that activates or increases the frequency, rate or extent of extracellular matrix organization. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:22357537 positive regulation of extracellular matrix organisation GOC:TermGenie up regulation of extracellular matrix organisation GOC:TermGenie up regulation of extracellular matrix organization GOC:TermGenie up-regulation of extracellular matrix organisation GOC:TermGenie up-regulation of extracellular matrix organization GOC:TermGenie upregulation of extracellular matrix organisation GOC:TermGenie upregulation of extracellular matrix organization GOC:TermGenie activation of extracellular matrix organisation GOC:TermGenie activation of extracellular matrix organization GOC:TermGenie activation of extracellular matrix organization and biogenesis GOC:TermGenie positive regulation of extracellular matrix organization and biogenesis GOC:TermGenie up regulation of extracellular matrix organization and biogenesis GOC:TermGenie up-regulation of extracellular matrix organization and biogenesis GOC:TermGenie upregulation of extracellular matrix organization and biogenesis GOC:TermGenie Any process that modulates the frequency, rate or extent of protein localization to plasma membrane. tb 2009-07-10T10:32:44Z GO:0090003 GO:1905963 regulation of protein localization in plasma membrane biological_process regulation of establishment of protein localisation in plasma membrane regulation of establishment of protein localization in plasma membrane regulation of establishment of protein localization to plasma membrane regulation of protein localisation in plasma membrane regulation of protein targeting to plasma membrane regulation of protein-plasma membrane targeting GO:1903076 regulation of protein localization to plasma membrane GO:1903076 Any process that modulates the frequency, rate or extent of protein localization to plasma membrane. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:11602640 regulation of protein localization in plasma membrane GOC:TermGenie regulation of establishment of protein localisation in plasma membrane GOC:mah regulation of protein localisation in plasma membrane GOC:TermGenie regulation of protein-plasma membrane targeting GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to plasma membrane. tb 2014-05-29T17:10:16Z GO:0090005 GO:1905964 down regulation of protein localisation in plasma membrane down regulation of protein localization in plasma membrane down regulation of protein localization to plasma membrane down-regulation of protein localisation in plasma membrane down-regulation of protein localization in plasma membrane down-regulation of protein localization to plasma membrane downregulation of protein localisation in plasma membrane downregulation of protein localization in plasma membrane downregulation of protein localization to plasma membrane negative regulation of protein localization in plasma membrane inhibition of protein localisation in plasma membrane inhibition of protein localization in plasma membrane inhibition of protein localization to plasma membrane inhibition of protein targeting to plasma membrane inhibition of protein-plasma membrane targeting biological_process down regulation of protein targeting to plasma membrane down regulation of protein-plasma membrane targeting down-regulation of protein targeting to plasma membrane down-regulation of protein-plasma membrane targeting downregulation of protein targeting to plasma membrane downregulation of protein-plasma membrane targeting negative regulation of establishment of protein localisation in plasma membrane negative regulation of establishment of protein localization in plasma membrane negative regulation of establishment of protein localization to plasma membrane negative regulation of protein localisation in plasma membrane negative regulation of protein targeting to plasma membrane negative regulation of protein-plasma membrane targeting GO:1903077 negative regulation of protein localization to plasma membrane GO:1903077 Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to plasma membrane. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:11602640 down regulation of protein localisation in plasma membrane GOC:TermGenie down regulation of protein localization in plasma membrane GOC:TermGenie down regulation of protein localization to plasma membrane GOC:TermGenie down-regulation of protein localisation in plasma membrane GOC:TermGenie down-regulation of protein localization in plasma membrane GOC:TermGenie down-regulation of protein localization to plasma membrane GOC:TermGenie downregulation of protein localisation in plasma membrane GOC:TermGenie downregulation of protein localization in plasma membrane GOC:TermGenie downregulation of protein localization to plasma membrane GOC:TermGenie negative regulation of protein localization in plasma membrane GOC:TermGenie inhibition of protein localisation in plasma membrane GOC:TermGenie inhibition of protein localization in plasma membrane GOC:TermGenie inhibition of protein localization to plasma membrane GOC:TermGenie inhibition of protein targeting to plasma membrane GOC:TermGenie inhibition of protein-plasma membrane targeting GOC:TermGenie down regulation of protein targeting to plasma membrane GOC:TermGenie down regulation of protein-plasma membrane targeting GOC:TermGenie down-regulation of protein targeting to plasma membrane GOC:TermGenie down-regulation of protein-plasma membrane targeting GOC:TermGenie downregulation of protein targeting to plasma membrane GOC:TermGenie downregulation of protein-plasma membrane targeting GOC:TermGenie negative regulation of establishment of protein localisation in plasma membrane GOC:mah negative regulation of protein localisation in plasma membrane GOC:TermGenie negative regulation of protein-plasma membrane targeting GOC:TermGenie Any process that activates or increases the frequency, rate or extent of protein localization to plasma membrane. tb 2009-07-10T10:34:17Z GO:0090004 GO:1905965 positive regulation of protein localisation in plasma membrane positive regulation of protein localization in plasma membrane up regulation of protein localisation in plasma membrane up regulation of protein localization in plasma membrane up regulation of protein localization to plasma membrane up-regulation of protein localisation in plasma membrane up-regulation of protein localization in plasma membrane up-regulation of protein localization to plasma membrane upregulation of protein localisation in plasma membrane upregulation of protein localization in plasma membrane upregulation of protein localization to plasma membrane activation of protein localisation in plasma membrane activation of protein localization in plasma membrane activation of protein localization to plasma membrane activation of protein targeting to plasma membrane activation of protein-plasma membrane targeting biological_process positive regulation of establishment of protein localisation in plasma membrane positive regulation of establishment of protein localization to plasma membrane positive regulation of protein targeting to plasma membrane positive regulation of protein-plasma membrane targeting up regulation of protein targeting to plasma membrane up regulation of protein-plasma membrane targeting up-regulation of protein targeting to plasma membrane up-regulation of protein-plasma membrane targeting upregulation of protein targeting to plasma membrane upregulation of protein-plasma membrane targeting GO:1903078 positive regulation of protein localization to plasma membrane GO:1903078 Any process that activates or increases the frequency, rate or extent of protein localization to plasma membrane. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:11602640 positive regulation of protein localisation in plasma membrane GOC:TermGenie positive regulation of protein localization in plasma membrane GOC:TermGenie up regulation of protein localisation in plasma membrane GOC:TermGenie up regulation of protein localization in plasma membrane GOC:TermGenie up regulation of protein localization to plasma membrane GOC:TermGenie up-regulation of protein localisation in plasma membrane GOC:TermGenie up-regulation of protein localization in plasma membrane GOC:TermGenie up-regulation of protein localization to plasma membrane GOC:TermGenie upregulation of protein localisation in plasma membrane GOC:TermGenie upregulation of protein localization in plasma membrane GOC:TermGenie upregulation of protein localization to plasma membrane GOC:TermGenie activation of protein localisation in plasma membrane GOC:TermGenie activation of protein localization in plasma membrane GOC:TermGenie activation of protein localization to plasma membrane GOC:TermGenie activation of protein targeting to plasma membrane GOC:TermGenie activation of protein-plasma membrane targeting GOC:TermGenie positive regulation of establishment of protein localisation in plasma membrane GOC:mah positive regulation of protein-plasma membrane targeting GOC:TermGenie up regulation of protein targeting to plasma membrane GOC:TermGenie up regulation of protein-plasma membrane targeting GOC:TermGenie up-regulation of protein targeting to plasma membrane GOC:TermGenie up-regulation of protein-plasma membrane targeting GOC:TermGenie upregulation of protein targeting to plasma membrane GOC:TermGenie upregulation of protein-plasma membrane targeting GOC:TermGenie Any process that modulates the frequency, rate or extent of actin filament-based movement. al 2014-06-12T16:55:57Z biological_process GO:1903115 regulation of actin filament-based movement GO:1903115 Any process that modulates the frequency, rate or extent of actin filament-based movement. GOC:TermGenie GO_REF:0000058 PMID:24798735 Any process that activates or increases the frequency, rate or extent of actin filament-based movement. al 2014-06-12T16:56:04Z up regulation of actin filament-based movement up-regulation of actin filament-based movement upregulation of actin filament-based movement activation of actin filament-based movement biological_process GO:1903116 positive regulation of actin filament-based movement GO:1903116 Any process that activates or increases the frequency, rate or extent of actin filament-based movement. GOC:TermGenie GO_REF:0000058 PMID:24798735 up regulation of actin filament-based movement GOC:TermGenie up-regulation of actin filament-based movement GOC:TermGenie upregulation of actin filament-based movement GOC:TermGenie activation of actin filament-based movement GOC:TermGenie A process in which a protein is transported to, or maintained in, the location of an actin cytoskeleton. mah 2014-06-16T11:27:09Z protein localisation in actin cytoskeleton protein localisation to actin cytoskeleton protein localization in actin cytoskeleton biological_process GO:1903119 protein localization to actin cytoskeleton GO:1903119 A process in which a protein is transported to, or maintained in, the location of an actin cytoskeleton. GOC:TermGenie GO_REF:0000087 PMID:24798735 protein localisation in actin cytoskeleton GOC:TermGenie protein localisation to actin cytoskeleton GOC:TermGenie protein localization in actin cytoskeleton GOC:TermGenie The process in which a relatively unspecialized cell acquires the specialized features of a mononuclear cell. cls 2014-06-25T15:47:09Z biological_process GO:1903131 mononuclear cell differentiation GO:1903131 The process in which a relatively unspecialized cell acquires the specialized features of a mononuclear cell. CL:0000842 GOC:TermGenie GO_REF:0000086 PMID:24759906 Any process that modulates the frequency, rate or extent of endodermal cell differentiation. als 2014-07-29T13:22:35Z regulation of endoderm cell differentiation biological_process GO:1903224 regulation of endodermal cell differentiation GO:1903224 Any process that modulates the frequency, rate or extent of endodermal cell differentiation. GOC:TermGenie GOC:als GO_REF:0000058 PMID:23154389 regulation of endoderm cell differentiation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of endodermal cell differentiation. als 2014-07-29T13:22:41Z down regulation of endoderm cell differentiation down regulation of endodermal cell differentiation down-regulation of endoderm cell differentiation down-regulation of endodermal cell differentiation downregulation of endoderm cell differentiation downregulation of endodermal cell differentiation negative regulation of endoderm cell differentiation inhibition of endoderm cell differentiation inhibition of endodermal cell differentiation biological_process GO:1903225 negative regulation of endodermal cell differentiation GO:1903225 Any process that stops, prevents or reduces the frequency, rate or extent of endodermal cell differentiation. GOC:TermGenie GOC:als GO_REF:0000058 PMID:23154389 down regulation of endoderm cell differentiation GOC:TermGenie down regulation of endodermal cell differentiation GOC:TermGenie down-regulation of endoderm cell differentiation GOC:TermGenie down-regulation of endodermal cell differentiation GOC:TermGenie downregulation of endoderm cell differentiation GOC:TermGenie downregulation of endodermal cell differentiation GOC:TermGenie negative regulation of endoderm cell differentiation GOC:TermGenie inhibition of endoderm cell differentiation GOC:TermGenie inhibition of endodermal cell differentiation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of endodermal cell differentiation. als 2014-07-29T13:22:47Z positive regulation of endoderm cell differentiation up regulation of endoderm cell differentiation up regulation of endodermal cell differentiation up-regulation of endoderm cell differentiation up-regulation of endodermal cell differentiation upregulation of endoderm cell differentiation upregulation of endodermal cell differentiation activation of endoderm cell differentiation activation of endodermal cell differentiation biological_process GO:1903226 positive regulation of endodermal cell differentiation GO:1903226 Any process that activates or increases the frequency, rate or extent of endodermal cell differentiation. GOC:TermGenie GOC:als GO_REF:0000058 PMID:23154389 positive regulation of endoderm cell differentiation GOC:TermGenie up regulation of endoderm cell differentiation GOC:TermGenie up regulation of endodermal cell differentiation GOC:TermGenie up-regulation of endoderm cell differentiation GOC:TermGenie up-regulation of endodermal cell differentiation GOC:TermGenie upregulation of endoderm cell differentiation GOC:TermGenie upregulation of endodermal cell differentiation GOC:TermGenie activation of endoderm cell differentiation GOC:TermGenie activation of endodermal cell differentiation GOC:TermGenie The process in which a relatively unspecialized cell acquires the specialized features of a multi-ciliated epithelial cell. tb 2014-08-05T19:21:21Z multiciliate cell differentiation biological_process GO:1903251 multi-ciliated epithelial cell differentiation GO:1903251 The process in which a relatively unspecialized cell acquires the specialized features of a multi-ciliated epithelial cell. GOC:TermGenie GOC:sp GO_REF:0000086 PMID:22231168 PMID:24934224 A process in which a protein is transported to, or maintained in, a location within a Golgi membrane. mah 2014-08-12T14:22:31Z protein localisation in Golgi membrane protein localisation to Golgi membrane protein localization in Golgi membrane biological_process GO:1903292 protein localization to Golgi membrane GO:1903292 A process in which a protein is transported to, or maintained in, a location within a Golgi membrane. GOC:TermGenie GO_REF:0000087 PMID:11378902 protein localisation in Golgi membrane GOC:TermGenie protein localisation to Golgi membrane GOC:TermGenie protein localization in Golgi membrane GOC:TermGenie Any process that modulates the frequency, rate or extent of vacuolar transport. vw 2014-08-18T13:16:04Z biological_process GO:1903335 regulation of vacuolar transport GO:1903335 Any process that modulates the frequency, rate or extent of vacuolar transport. GOC:TermGenie GOC:vw GO_REF:0000058 Any process that stops, prevents or reduces the frequency, rate or extent of vacuolar transport. vw 2014-08-18T13:16:11Z down regulation of vacuolar transport down-regulation of vacuolar transport downregulation of vacuolar transport inhibition of vacuolar transport biological_process GO:1903336 negative regulation of vacuolar transport GO:1903336 Any process that stops, prevents or reduces the frequency, rate or extent of vacuolar transport. GOC:TermGenie GOC:vw GO_REF:0000058 down regulation of vacuolar transport GOC:TermGenie down-regulation of vacuolar transport GOC:TermGenie downregulation of vacuolar transport GOC:TermGenie inhibition of vacuolar transport GOC:TermGenie Any process that activates or increases the frequency, rate or extent of vacuolar transport. vw 2014-08-18T13:16:19Z up regulation of vacuolar transport up-regulation of vacuolar transport upregulation of vacuolar transport activation of vacuolar transport biological_process GO:1903337 positive regulation of vacuolar transport GO:1903337 Any process that activates or increases the frequency, rate or extent of vacuolar transport. GOC:TermGenie GOC:vw GO_REF:0000058 up regulation of vacuolar transport GOC:TermGenie up-regulation of vacuolar transport GOC:TermGenie upregulation of vacuolar transport GOC:TermGenie activation of vacuolar transport GOC:TermGenie Any process that modulates the frequency, rate or extent of nucleus organization. hjd 2014-08-20T19:36:16Z regulation of nuclear organisation regulation of nuclear organization biological_process regulation of nuclear morphology regulation of nuclear organization and biogenesis regulation of nucleus organization and biogenesis GO:1903353 regulation of nucleus organization GO:1903353 Any process that modulates the frequency, rate or extent of nucleus organization. GOC:TermGenie GO_REF:0000058 PMID:16943282 regulation of nuclear organisation GOC:TermGenie regulation of nuclear organization GOC:TermGenie regulation of nuclear morphology GOC:TermGenie regulation of nuclear organization and biogenesis GOC:TermGenie regulation of nucleus organization and biogenesis GOC:TermGenie Any process that modulates the frequency, rate or extent of Golgi organization. als 2014-08-21T10:22:22Z regulation of Golgi organisation biological_process regulation of Golgi organization and biogenesis GO:1903358 regulation of Golgi organization GO:1903358 Any process that modulates the frequency, rate or extent of Golgi organization. GOC:TermGenie GOC:als GO_REF:0000058 PMID:17562788 regulation of Golgi organisation GOC:TermGenie regulation of Golgi organization and biogenesis GOC:TermGenie Any process that modulates the frequency, rate or extent of mitotic chromosome condensation. al 2014-08-26T13:57:13Z biological_process GO:1903379 regulation of mitotic chromosome condensation GO:1903379 Any process that modulates the frequency, rate or extent of mitotic chromosome condensation. GOC:TermGenie GO_REF:0000058 PMID:9490640 Any process that activates or increases the frequency, rate or extent of mitotic chromosome condensation. al 2014-08-26T13:57:29Z up regulation of mitotic chromosome condensation up-regulation of mitotic chromosome condensation upregulation of mitotic chromosome condensation activation of mitotic chromosome condensation biological_process GO:1903380 positive regulation of mitotic chromosome condensation GO:1903380 Any process that activates or increases the frequency, rate or extent of mitotic chromosome condensation. GOC:TermGenie GO_REF:0000058 PMID:9490640 up regulation of mitotic chromosome condensation GOC:TermGenie up-regulation of mitotic chromosome condensation GOC:TermGenie upregulation of mitotic chromosome condensation GOC:TermGenie activation of mitotic chromosome condensation GOC:TermGenie Any process that modulates the frequency, rate or extent of cell maturation. jl 2014-09-15T13:31:23Z biological_process regulation of functional differentiation GO:1903429 regulation of cell maturation GO:1903429 Any process that modulates the frequency, rate or extent of cell maturation. GOC:TermGenie GO_REF:0000058 PMID:17459944 regulation of functional differentiation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of cell maturation. jl 2014-09-15T13:31:32Z down regulation of cell maturation down-regulation of cell maturation downregulation of cell maturation inhibition of cell maturation biological_process down regulation of functional differentiation down-regulation of functional differentiation downregulation of functional differentiation inhibition of functional differentiation negative regulation of functional differentiation GO:1903430 negative regulation of cell maturation GO:1903430 Any process that stops, prevents or reduces the frequency, rate or extent of cell maturation. GOC:TermGenie GO_REF:0000058 PMID:17459944 down regulation of cell maturation GOC:TermGenie down-regulation of cell maturation GOC:TermGenie downregulation of cell maturation GOC:TermGenie inhibition of cell maturation GOC:TermGenie down regulation of functional differentiation GOC:TermGenie down-regulation of functional differentiation GOC:TermGenie downregulation of functional differentiation GOC:TermGenie inhibition of functional differentiation GOC:TermGenie negative regulation of functional differentiation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of cell maturation. jl 2014-09-15T13:31:41Z up regulation of cell maturation up-regulation of cell maturation upregulation of cell maturation activation of cell maturation biological_process activation of functional differentiation positive regulation of functional differentiation up regulation of functional differentiation up-regulation of functional differentiation upregulation of functional differentiation GO:1903431 positive regulation of cell maturation GO:1903431 Any process that activates or increases the frequency, rate or extent of cell maturation. GOC:TermGenie GO_REF:0000058 PMID:17459944 up regulation of cell maturation GOC:TermGenie up-regulation of cell maturation GOC:TermGenie upregulation of cell maturation GOC:TermGenie activation of cell maturation GOC:TermGenie activation of functional differentiation GOC:TermGenie positive regulation of functional differentiation GOC:TermGenie up regulation of functional differentiation GOC:TermGenie up-regulation of functional differentiation GOC:TermGenie upregulation of functional differentiation GOC:TermGenie A process in which a protein is transported to, or maintained in, a location within a ciliary membrane. pr 2014-09-16T15:15:39Z protein localisation in ciliary membrane protein localisation to ciliary membrane protein localization in ciliary membrane biological_process GO:1903441 protein localization to ciliary membrane GO:1903441 A process in which a protein is transported to, or maintained in, a location within a ciliary membrane. GOC:TermGenie GOC:cilia GOC:krc GO_REF:0000087 PMID:22139371 protein localisation in ciliary membrane GOC:TermGenie protein localisation to ciliary membrane GOC:TermGenie protein localization in ciliary membrane GOC:TermGenie Any process that modulates the frequency, rate or extent of blood circulation. mr 2014-10-06T18:38:56Z biological_process regulation of hemolymph circulation GO:1903522 regulation of blood circulation GO:1903522 Any process that modulates the frequency, rate or extent of blood circulation. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:10659969 regulation of hemolymph circulation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of blood circulation. mr 2014-10-06T18:39:05Z down regulation of blood circulation down-regulation of blood circulation downregulation of blood circulation inhibition of blood circulation biological_process down regulation of hemolymph circulation down-regulation of hemolymph circulation downregulation of hemolymph circulation inhibition of hemolymph circulation negative regulation of hemolymph circulation GO:1903523 negative regulation of blood circulation GO:1903523 Any process that stops, prevents or reduces the frequency, rate or extent of blood circulation. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:10659969 down regulation of blood circulation GOC:TermGenie down-regulation of blood circulation GOC:TermGenie downregulation of blood circulation GOC:TermGenie inhibition of blood circulation GOC:TermGenie down regulation of hemolymph circulation GOC:TermGenie down-regulation of hemolymph circulation GOC:TermGenie downregulation of hemolymph circulation GOC:TermGenie inhibition of hemolymph circulation GOC:TermGenie negative regulation of hemolymph circulation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of blood circulation. mr 2014-10-06T18:39:13Z up regulation of blood circulation up-regulation of blood circulation upregulation of blood circulation activation of blood circulation biological_process activation of hemolymph circulation positive regulation of hemolymph circulation up regulation of hemolymph circulation up-regulation of hemolymph circulation upregulation of hemolymph circulation GO:1903524 positive regulation of blood circulation GO:1903524 Any process that activates or increases the frequency, rate or extent of blood circulation. GOC:TermGenie GOC:mr GO_REF:0000058 PMID:10659969 up regulation of blood circulation GOC:TermGenie up-regulation of blood circulation GOC:TermGenie upregulation of blood circulation GOC:TermGenie activation of blood circulation GOC:TermGenie activation of hemolymph circulation GOC:TermGenie positive regulation of hemolymph circulation GOC:TermGenie up regulation of hemolymph circulation GOC:TermGenie up-regulation of hemolymph circulation GOC:TermGenie upregulation of hemolymph circulation GOC:TermGenie Any process that modulates the frequency, rate or extent of secretion by cell. pm 2014-10-08T13:24:59Z regulation of cellular secretion biological_process GO:1903530 regulation of secretion by cell GO:1903530 Any process that modulates the frequency, rate or extent of secretion by cell. GOC:TermGenie GOC:pm GO_REF:0000058 PMID:12130530 regulation of cellular secretion GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of secretion by cell. pm 2014-10-08T13:25:08Z down regulation of cellular secretion down regulation of secretion by cell down-regulation of cellular secretion down-regulation of secretion by cell downregulation of cellular secretion downregulation of secretion by cell negative regulation of cellular secretion inhibition of cellular secretion inhibition of secretion by cell biological_process GO:1903531 negative regulation of secretion by cell GO:1903531 Any process that stops, prevents or reduces the frequency, rate or extent of secretion by cell. GOC:TermGenie GOC:pm GO_REF:0000058 PMID:12130530 down regulation of cellular secretion GOC:TermGenie down regulation of secretion by cell GOC:TermGenie down-regulation of cellular secretion GOC:TermGenie down-regulation of secretion by cell GOC:TermGenie downregulation of cellular secretion GOC:TermGenie downregulation of secretion by cell GOC:TermGenie negative regulation of cellular secretion GOC:TermGenie inhibition of cellular secretion GOC:TermGenie inhibition of secretion by cell GOC:TermGenie Any process that activates or increases the frequency, rate or extent of secretion by cell. pm 2014-10-08T13:25:17Z positive regulation of cellular secretion up regulation of cellular secretion up regulation of secretion by cell up-regulation of cellular secretion up-regulation of secretion by cell upregulation of cellular secretion upregulation of secretion by cell activation of cellular secretion activation of secretion by cell biological_process GO:1903532 positive regulation of secretion by cell GO:1903532 Any process that activates or increases the frequency, rate or extent of secretion by cell. GOC:TermGenie GOC:pm GO_REF:0000058 PMID:12130530 positive regulation of cellular secretion GOC:TermGenie up regulation of cellular secretion GOC:TermGenie up regulation of secretion by cell GOC:TermGenie up-regulation of cellular secretion GOC:TermGenie up-regulation of secretion by cell GOC:TermGenie upregulation of cellular secretion GOC:TermGenie upregulation of secretion by cell GOC:TermGenie activation of cellular secretion GOC:TermGenie activation of secretion by cell GOC:TermGenie Any meiotic cell cycle process that is involved in oocyte maturation. pr 2014-10-09T10:46:14Z meiosis involved in oocyte maturation biological_process GO:1903537 meiotic cell cycle process involved in oocyte maturation GO:1903537 Any meiotic cell cycle process that is involved in oocyte maturation. GOC:TermGenie GOC:jz GO_REF:0000060 PMID:25212395 Any process that modulates the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation. pr 2014-10-09T10:52:38Z regulation of meiosis involved in oocyte maturation biological_process GO:1903538 regulation of meiotic cell cycle process involved in oocyte maturation GO:1903538 Any process that modulates the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation. GOC:TermGenie GOC:jz GO_REF:0000058 PMID:25212395 regulation of meiosis involved in oocyte maturation GOC:TermGenie Any process that modulates the frequency, rate or extent of exosomal secretion. pga 2014-10-14T11:38:52Z regulation of exosomal secretory pathway regulation of extracellular vesicular exosome secretion regulation of secretion of exosome regulation of exosomal protein secretion biological_process GO:1903541 regulation of exosomal secretion GO:1903541 Any process that modulates the frequency, rate or extent of exosomal secretion. GOC:TermGenie GO_REF:0000058 PMID:24105262 regulation of exosomal secretory pathway GOC:TermGenie regulation of extracellular vesicular exosome secretion GOC:TermGenie regulation of secretion of exosome GOC:TermGenie regulation of exosomal protein secretion GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of exosomal secretion. pga 2014-10-14T11:39:02Z down regulation of exosomal secretion down regulation of exosomal secretory pathway down regulation of extracellular vesicular exosome secretion down regulation of secretion of exosome down-regulation of exosomal secretion down-regulation of exosomal secretory pathway down-regulation of extracellular vesicular exosome secretion down-regulation of secretion of exosome downregulation of exosomal secretion downregulation of exosomal secretory pathway downregulation of extracellular vesicular exosome secretion downregulation of secretion of exosome negative regulation of exosomal secretory pathway negative regulation of extracellular vesicular exosome secretion negative regulation of secretion of exosome down regulation of exosomal protein secretion down-regulation of exosomal protein secretion downregulation of exosomal protein secretion inhibition of exosomal protein secretion inhibition of exosomal secretion inhibition of exosomal secretory pathway inhibition of extracellular vesicular exosome secretion inhibition of secretion of exosome negative regulation of exosomal protein secretion biological_process GO:1903542 negative regulation of exosomal secretion GO:1903542 Any process that stops, prevents or reduces the frequency, rate or extent of exosomal secretion. GOC:TermGenie GO_REF:0000058 PMID:24105262 down regulation of exosomal secretion GOC:TermGenie down regulation of exosomal secretory pathway GOC:TermGenie down regulation of extracellular vesicular exosome secretion GOC:TermGenie down regulation of secretion of exosome GOC:TermGenie down-regulation of exosomal secretion GOC:TermGenie down-regulation of exosomal secretory pathway GOC:TermGenie down-regulation of extracellular vesicular exosome secretion GOC:TermGenie down-regulation of secretion of exosome GOC:TermGenie downregulation of exosomal secretion GOC:TermGenie downregulation of exosomal secretory pathway GOC:TermGenie downregulation of extracellular vesicular exosome secretion GOC:TermGenie downregulation of secretion of exosome GOC:TermGenie negative regulation of exosomal secretory pathway GOC:TermGenie negative regulation of extracellular vesicular exosome secretion GOC:TermGenie negative regulation of secretion of exosome GOC:TermGenie down regulation of exosomal protein secretion GOC:TermGenie down-regulation of exosomal protein secretion GOC:TermGenie downregulation of exosomal protein secretion GOC:TermGenie inhibition of exosomal protein secretion GOC:TermGenie inhibition of exosomal secretion GOC:TermGenie inhibition of exosomal secretory pathway GOC:TermGenie inhibition of extracellular vesicular exosome secretion GOC:TermGenie inhibition of secretion of exosome GOC:TermGenie negative regulation of exosomal protein secretion GOC:TermGenie Any process that activates or increases the frequency, rate or extent of exosomal secretion. pga 2014-10-14T11:39:10Z positive regulation of exosomal secretory pathway positive regulation of extracellular vesicular exosome secretion positive regulation of secretion of exosome up regulation of exosomal secretion up regulation of exosomal secretory pathway up regulation of extracellular vesicular exosome secretion up regulation of secretion of exosome up-regulation of exosomal secretion up-regulation of exosomal secretory pathway up-regulation of extracellular vesicular exosome secretion up-regulation of secretion of exosome upregulation of exosomal secretion upregulation of exosomal secretory pathway upregulation of extracellular vesicular exosome secretion upregulation of secretion of exosome activation of exosomal protein secretion activation of exosomal secretion activation of exosomal secretory pathway activation of extracellular vesicular exosome secretion activation of secretion of exosome positive regulation of exosomal protein secretion up regulation of exosomal protein secretion up-regulation of exosomal protein secretion upregulation of exosomal protein secretion biological_process GO:1903543 positive regulation of exosomal secretion GO:1903543 Any process that activates or increases the frequency, rate or extent of exosomal secretion. GOC:TermGenie GO_REF:0000058 PMID:24105262 positive regulation of exosomal secretory pathway GOC:TermGenie positive regulation of extracellular vesicular exosome secretion GOC:TermGenie positive regulation of secretion of exosome GOC:TermGenie up regulation of exosomal secretion GOC:TermGenie up regulation of exosomal secretory pathway GOC:TermGenie up regulation of extracellular vesicular exosome secretion GOC:TermGenie up regulation of secretion of exosome GOC:TermGenie up-regulation of exosomal secretion GOC:TermGenie up-regulation of exosomal secretory pathway GOC:TermGenie up-regulation of extracellular vesicular exosome secretion GOC:TermGenie up-regulation of secretion of exosome GOC:TermGenie upregulation of exosomal secretion GOC:TermGenie upregulation of exosomal secretory pathway GOC:TermGenie upregulation of extracellular vesicular exosome secretion GOC:TermGenie upregulation of secretion of exosome GOC:TermGenie activation of exosomal protein secretion GOC:TermGenie activation of exosomal secretion GOC:TermGenie activation of exosomal secretory pathway GOC:TermGenie activation of extracellular vesicular exosome secretion GOC:TermGenie activation of secretion of exosome GOC:TermGenie positive regulation of exosomal protein secretion GOC:TermGenie up regulation of exosomal protein secretion GOC:TermGenie up-regulation of exosomal protein secretion GOC:TermGenie upregulation of exosomal protein secretion GOC:TermGenie Any process that modulates the frequency, rate or extent of extracellular vesicular exosome assembly. pga 2014-10-20T15:37:25Z regulation of extracellular vesicular exosome assembly biological_process GO:1903551 regulation of extracellular exosome assembly GO:1903551 Any process that modulates the frequency, rate or extent of extracellular vesicular exosome assembly. GOC:TermGenie GO_REF:0000058 PMID:24105262 regulation of extracellular vesicular exosome assembly GOC:vesicles Any process that stops, prevents or reduces the frequency, rate or extent of extracellular vesicular exosome assembly. pga 2014-10-20T15:37:33Z down regulation of extracellular vesicular exosome assembly down-regulation of extracellular vesicular exosome assembly downregulation of extracellular vesicular exosome assembly negative regulation of extracellular vesicular exosome assembly inhibition of extracellular vesicular exosome assembly biological_process GO:1903552 negative regulation of extracellular exosome assembly GO:1903552 Any process that stops, prevents or reduces the frequency, rate or extent of extracellular vesicular exosome assembly. GOC:TermGenie GO_REF:0000058 PMID:24105262 down regulation of extracellular vesicular exosome assembly GOC:TermGenie down-regulation of extracellular vesicular exosome assembly GOC:TermGenie downregulation of extracellular vesicular exosome assembly GOC:TermGenie negative regulation of extracellular vesicular exosome assembly GOC:vesicles inhibition of extracellular vesicular exosome assembly GOC:TermGenie Any process that activates or increases the frequency, rate or extent of extracellular vesicular exosome assembly. pga 2014-10-20T15:37:42Z up regulation of extracellular vesicular exosome assembly up-regulation of extracellular vesicular exosome assembly upregulation of extracellular vesicular exosome assembly activation of extracellular vesicular exosome assembly biological_process positive regulation of extracellular vesicular exosome assembly GO:1903553 positive regulation of extracellular exosome assembly GO:1903553 Any process that activates or increases the frequency, rate or extent of extracellular vesicular exosome assembly. GOC:TermGenie GO_REF:0000058 PMID:24105262 up regulation of extracellular vesicular exosome assembly GOC:TermGenie up-regulation of extracellular vesicular exosome assembly GOC:TermGenie upregulation of extracellular vesicular exosome assembly GOC:TermGenie activation of extracellular vesicular exosome assembly GOC:TermGenie positive regulation of extracellular vesicular exosome assembly GOC:vesicles Any vesicle that is part of the extracellular region. jl 2014-10-22T14:26:11Z cellular_component microparticle GO:1903561 extracellular vesicle GO:1903561 Any vesicle that is part of the extracellular region. GOC:TermGenie GOC:pm GO_REF:0000064 PMID:24769233 microparticle GOC:vesicles Any process that modulates the frequency, rate or extent of protein localization to cilium. krc 2014-10-24T20:58:11Z biological_process GO:1903564 regulation of protein localization to cilium GO:1903564 Any process that modulates the frequency, rate or extent of protein localization to cilium. GOC:TermGenie GOC:cilia GOC:krc GO_REF:0000058 PMID:22072986 Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cilium. krc 2014-10-24T20:58:20Z down regulation of protein localization to cilium down-regulation of protein localization to cilium downregulation of protein localization to cilium inhibition of protein localization to cilium biological_process GO:1903565 negative regulation of protein localization to cilium GO:1903565 Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cilium. GOC:TermGenie GOC:cilia GOC:krc GO_REF:0000058 PMID:22072986 down regulation of protein localization to cilium GOC:TermGenie down-regulation of protein localization to cilium GOC:TermGenie downregulation of protein localization to cilium GOC:TermGenie inhibition of protein localization to cilium GOC:TermGenie Any process that activates or increases the frequency, rate or extent of protein localization to cilium. krc 2014-10-24T20:58:28Z up regulation of protein localization to cilium up-regulation of protein localization to cilium upregulation of protein localization to cilium activation of protein localization to cilium biological_process GO:1903566 positive regulation of protein localization to cilium GO:1903566 Any process that activates or increases the frequency, rate or extent of protein localization to cilium. GOC:TermGenie GOC:cilia GOC:krc GO_REF:0000058 PMID:22072986 up regulation of protein localization to cilium GOC:TermGenie up-regulation of protein localization to cilium GOC:TermGenie upregulation of protein localization to cilium GOC:TermGenie activation of protein localization to cilium GOC:TermGenie Any process that modulates the frequency, rate or extent of protein localization to ciliary membrane. krc 2014-10-24T21:32:51Z regulation of protein localisation in ciliary membrane regulation of protein localisation to ciliary membrane regulation of protein localization in ciliary membrane biological_process GO:1903567 regulation of protein localization to ciliary membrane GO:1903567 Any process that modulates the frequency, rate or extent of protein localization to ciliary membrane. GOC:TermGenie GOC:cilia GOC:krc GO_REF:0000058 PMID:22072986 regulation of protein localisation in ciliary membrane GOC:TermGenie regulation of protein localisation to ciliary membrane GOC:TermGenie regulation of protein localization in ciliary membrane GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to ciliary membrane. krc 2014-10-24T21:32:59Z down regulation of protein localisation in ciliary membrane down regulation of protein localisation to ciliary membrane down regulation of protein localization in ciliary membrane down regulation of protein localization to ciliary membrane down-regulation of protein localisation in ciliary membrane down-regulation of protein localisation to ciliary membrane down-regulation of protein localization in ciliary membrane down-regulation of protein localization to ciliary membrane downregulation of protein localisation in ciliary membrane downregulation of protein localisation to ciliary membrane downregulation of protein localization in ciliary membrane downregulation of protein localization to ciliary membrane negative regulation of protein localisation in ciliary membrane negative regulation of protein localisation to ciliary membrane negative regulation of protein localization in ciliary membrane inhibition of protein localisation in ciliary membrane inhibition of protein localisation to ciliary membrane inhibition of protein localization in ciliary membrane inhibition of protein localization to ciliary membrane biological_process GO:1903568 negative regulation of protein localization to ciliary membrane GO:1903568 Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to ciliary membrane. GOC:TermGenie GOC:cilia GOC:krc GO_REF:0000058 PMID:22072986 down regulation of protein localisation in ciliary membrane GOC:TermGenie down regulation of protein localisation to ciliary membrane GOC:TermGenie down regulation of protein localization in ciliary membrane GOC:TermGenie down regulation of protein localization to ciliary membrane GOC:TermGenie down-regulation of protein localisation in ciliary membrane GOC:TermGenie down-regulation of protein localisation to ciliary membrane GOC:TermGenie down-regulation of protein localization in ciliary membrane GOC:TermGenie down-regulation of protein localization to ciliary membrane GOC:TermGenie downregulation of protein localisation in ciliary membrane GOC:TermGenie downregulation of protein localisation to ciliary membrane GOC:TermGenie downregulation of protein localization in ciliary membrane GOC:TermGenie downregulation of protein localization to ciliary membrane GOC:TermGenie negative regulation of protein localisation in ciliary membrane GOC:TermGenie negative regulation of protein localisation to ciliary membrane GOC:TermGenie negative regulation of protein localization in ciliary membrane GOC:TermGenie inhibition of protein localisation in ciliary membrane GOC:TermGenie inhibition of protein localisation to ciliary membrane GOC:TermGenie inhibition of protein localization in ciliary membrane GOC:TermGenie inhibition of protein localization to ciliary membrane GOC:TermGenie Any process that activates or increases the frequency, rate or extent of protein localization to ciliary membrane. krc 2014-10-24T21:33:08Z positive regulation of protein localisation in ciliary membrane positive regulation of protein localisation to ciliary membrane positive regulation of protein localization in ciliary membrane up regulation of protein localisation in ciliary membrane up regulation of protein localisation to ciliary membrane up regulation of protein localization in ciliary membrane up regulation of protein localization to ciliary membrane up-regulation of protein localisation in ciliary membrane up-regulation of protein localisation to ciliary membrane up-regulation of protein localization in ciliary membrane up-regulation of protein localization to ciliary membrane upregulation of protein localisation in ciliary membrane upregulation of protein localisation to ciliary membrane upregulation of protein localization in ciliary membrane upregulation of protein localization to ciliary membrane activation of protein localisation in ciliary membrane activation of protein localisation to ciliary membrane activation of protein localization in ciliary membrane activation of protein localization to ciliary membrane biological_process GO:1903569 positive regulation of protein localization to ciliary membrane GO:1903569 Any process that activates or increases the frequency, rate or extent of protein localization to ciliary membrane. GOC:TermGenie GOC:cilia GOC:krc GO_REF:0000058 PMID:22072986 positive regulation of protein localisation in ciliary membrane GOC:TermGenie positive regulation of protein localisation to ciliary membrane GOC:TermGenie positive regulation of protein localization in ciliary membrane GOC:TermGenie up regulation of protein localisation in ciliary membrane GOC:TermGenie up regulation of protein localisation to ciliary membrane GOC:TermGenie up regulation of protein localization in ciliary membrane GOC:TermGenie up regulation of protein localization to ciliary membrane GOC:TermGenie up-regulation of protein localisation in ciliary membrane GOC:TermGenie up-regulation of protein localisation to ciliary membrane GOC:TermGenie up-regulation of protein localization in ciliary membrane GOC:TermGenie up-regulation of protein localization to ciliary membrane GOC:TermGenie upregulation of protein localisation in ciliary membrane GOC:TermGenie upregulation of protein localisation to ciliary membrane GOC:TermGenie upregulation of protein localization in ciliary membrane GOC:TermGenie upregulation of protein localization to ciliary membrane GOC:TermGenie activation of protein localisation in ciliary membrane GOC:TermGenie activation of protein localisation to ciliary membrane GOC:TermGenie activation of protein localization in ciliary membrane GOC:TermGenie activation of protein localization to ciliary membrane GOC:TermGenie The process whose specific outcome is the progression of a substantia propria of cornea over time, from its formation to the mature structure. cls 2014-12-03T13:12:09Z corneal stroma development stroma of cornea development biological_process substantia propria development GO:1903701 substantia propria of cornea development GO:1903701 The process whose specific outcome is the progression of a substantia propria of cornea over time, from its formation to the mature structure. GOC:TermGenie GO_REF:0000094 PMID:12556382 corneal stroma development GOC:TermGenie stroma of cornea development GOC:TermGenie substantia propria development GOC:TermGenie The process whose specific outcome is the progression of an esophagus over time, from its formation to the mature structure. cls 2014-12-03T14:41:30Z esophageal development gullet development oesophagus development biological_process GO:1903702 esophagus development GO:1903702 The process whose specific outcome is the progression of an esophagus over time, from its formation to the mature structure. GOC:TermGenie GO_REF:0000094 ISBN:0-683-40008-8 esophageal development MGI:csmith gullet development GOC:TermGenie oesophagus development GOC:TermGenie Any process that modulates the frequency, rate or extent of hemopoiesis. pad 2014-12-04T15:34:13Z regulation of blood cell biosynthesis regulation of blood cell formation regulation of haemopoiesis regulation of hematopoiesis biological_process GO:1903706 An example of this is Atg7 in mouse (UniProt symbol, Q9D906) in PMID:20080761, inferred from mutant phenotype. regulation of hemopoiesis GO:1903706 Any process that modulates the frequency, rate or extent of hemopoiesis. GOC:PARL GOC:TermGenie GOC:pad GO_REF:0000058 PMID:20080761 regulation of blood cell biosynthesis GOC:TermGenie regulation of blood cell formation GOC:TermGenie regulation of haemopoiesis GOC:TermGenie regulation of hematopoiesis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of hemopoiesis. pad 2014-12-04T15:34:21Z down regulation of blood cell biosynthesis down regulation of blood cell formation down regulation of haemopoiesis down regulation of hematopoiesis down regulation of hemopoiesis down-regulation of blood cell biosynthesis down-regulation of blood cell formation down-regulation of haemopoiesis down-regulation of hematopoiesis down-regulation of hemopoiesis downregulation of blood cell biosynthesis downregulation of blood cell formation downregulation of haemopoiesis downregulation of hematopoiesis downregulation of hemopoiesis negative regulation of blood cell biosynthesis negative regulation of blood cell formation negative regulation of haemopoiesis negative regulation of hematopoiesis inhibition of blood cell biosynthesis inhibition of blood cell formation inhibition of haemopoiesis inhibition of hematopoiesis inhibition of hemopoiesis biological_process GO:1903707 An example of this is Atg7 in mouse (UniProt symbol, Q9D906) in PMID:20080761, inferred from mutant phenotype. negative regulation of hemopoiesis GO:1903707 Any process that stops, prevents or reduces the frequency, rate or extent of hemopoiesis. GOC:PARL GOC:TermGenie GOC:pad GO_REF:0000058 PMID:20080761 down regulation of blood cell biosynthesis GOC:TermGenie down regulation of blood cell formation GOC:TermGenie down regulation of haemopoiesis GOC:TermGenie down regulation of hematopoiesis GOC:TermGenie down regulation of hemopoiesis GOC:TermGenie down-regulation of blood cell biosynthesis GOC:TermGenie down-regulation of blood cell formation GOC:TermGenie down-regulation of haemopoiesis GOC:TermGenie down-regulation of hematopoiesis GOC:TermGenie down-regulation of hemopoiesis GOC:TermGenie downregulation of blood cell biosynthesis GOC:TermGenie downregulation of blood cell formation GOC:TermGenie downregulation of haemopoiesis GOC:TermGenie downregulation of hematopoiesis GOC:TermGenie downregulation of hemopoiesis GOC:TermGenie negative regulation of blood cell biosynthesis GOC:TermGenie negative regulation of blood cell formation GOC:TermGenie negative regulation of haemopoiesis GOC:TermGenie negative regulation of hematopoiesis GOC:TermGenie inhibition of blood cell biosynthesis GOC:TermGenie inhibition of blood cell formation GOC:TermGenie inhibition of haemopoiesis GOC:TermGenie inhibition of hematopoiesis GOC:TermGenie inhibition of hemopoiesis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of hemopoiesis. pad 2014-12-04T15:34:30Z positive regulation of blood cell biosynthesis positive regulation of blood cell formation positive regulation of haemopoiesis positive regulation of hematopoiesis up regulation of blood cell biosynthesis up regulation of blood cell formation up regulation of haemopoiesis up regulation of hematopoiesis up regulation of hemopoiesis up-regulation of blood cell biosynthesis up-regulation of blood cell formation up-regulation of haemopoiesis up-regulation of hematopoiesis up-regulation of hemopoiesis upregulation of blood cell biosynthesis upregulation of blood cell formation upregulation of haemopoiesis upregulation of hematopoiesis upregulation of hemopoiesis activation of blood cell biosynthesis activation of blood cell formation activation of haemopoiesis activation of hematopoiesis activation of hemopoiesis biological_process GO:1903708 An example of this is Atg7 in mouse (UniProt symbol, Q9D906) in PMID:20080761, inferred from mutant phenotype. positive regulation of hemopoiesis GO:1903708 Any process that activates or increases the frequency, rate or extent of hemopoiesis. GOC:PARL GOC:TermGenie GOC:pad GO_REF:0000058 PMID:20080761 positive regulation of blood cell biosynthesis GOC:TermGenie positive regulation of blood cell formation GOC:TermGenie positive regulation of haemopoiesis GOC:TermGenie positive regulation of hematopoiesis GOC:TermGenie up regulation of blood cell biosynthesis GOC:TermGenie up regulation of blood cell formation GOC:TermGenie up regulation of haemopoiesis GOC:TermGenie up regulation of hematopoiesis GOC:TermGenie up regulation of hemopoiesis GOC:TermGenie up-regulation of blood cell biosynthesis GOC:TermGenie up-regulation of blood cell formation GOC:TermGenie up-regulation of haemopoiesis GOC:TermGenie up-regulation of hematopoiesis GOC:TermGenie up-regulation of hemopoiesis GOC:TermGenie upregulation of blood cell biosynthesis GOC:TermGenie upregulation of blood cell formation GOC:TermGenie upregulation of haemopoiesis GOC:TermGenie upregulation of hematopoiesis GOC:TermGenie upregulation of hemopoiesis GOC:TermGenie activation of blood cell biosynthesis GOC:TermGenie activation of blood cell formation GOC:TermGenie activation of haemopoiesis GOC:TermGenie activation of hematopoiesis GOC:TermGenie activation of hemopoiesis GOC:TermGenie Any process that modulates the frequency, rate or extent of plasma membrane organization. al 2014-12-10T18:59:44Z regulation of plasma membrane organisation biological_process regulation of plasma membrane organization and biogenesis GO:1903729 regulation of plasma membrane organization GO:1903729 Any process that modulates the frequency, rate or extent of plasma membrane organization. GOC:TermGenie GO_REF:0000058 PMID:24514900 regulation of plasma membrane organisation GOC:TermGenie regulation of plasma membrane organization and biogenesis GOC:TermGenie A process in which a protein is transported to, or maintained in, a location within a vacuolar membrane. mah 2015-01-07T13:15:54Z protein localisation in vacuolar membrane protein localisation to vacuolar membrane protein localization in vacuolar membrane biological_process GO:1903778 protein localization to vacuolar membrane GO:1903778 A process in which a protein is transported to, or maintained in, a location within a vacuolar membrane. GOC:TermGenie GO_REF:0000087 PMID:25378562 protein localisation in vacuolar membrane GOC:TermGenie protein localisation to vacuolar membrane GOC:TermGenie protein localization in vacuolar membrane GOC:TermGenie Any process that modulates the frequency, rate or extent of cardiac conduction. rph 2015-01-07T13:20:11Z Reactome:R-HSA-5578768 Reactome:R-HSA-5578775 biological_process GO:1903779 regulation of cardiac conduction GO:1903779 Any process that modulates the frequency, rate or extent of cardiac conduction. GOC:BHF GOC:TermGenie GOC:mtg_cardiac_conduct_nov11 GOC:rph GO_REF:0000058 PMID:12967627 Reactome:R-HSA-5578768 Physiological factors Reactome:R-HSA-5578775 Ion homeostasis Any process that stops, prevents or reduces the frequency, rate or extent of cardiac conduction. rph 2015-01-07T13:20:20Z down regulation of cardiac conduction down-regulation of cardiac conduction downregulation of cardiac conduction inhibition of cardiac conduction biological_process GO:1903780 negative regulation of cardiac conduction GO:1903780 Any process that stops, prevents or reduces the frequency, rate or extent of cardiac conduction. GOC:BHF GOC:TermGenie GOC:mtg_cardiac_conduct_nov11 GOC:rph GO_REF:0000058 PMID:12967627 down regulation of cardiac conduction GOC:TermGenie down-regulation of cardiac conduction GOC:TermGenie downregulation of cardiac conduction GOC:TermGenie inhibition of cardiac conduction GOC:TermGenie Any process that activates or increases the frequency, rate or extent of cardiac conduction. rph 2015-01-07T13:20:28Z up regulation of cardiac conduction up-regulation of cardiac conduction upregulation of cardiac conduction activation of cardiac conduction biological_process GO:1903781 positive regulation of cardiac conduction GO:1903781 Any process that activates or increases the frequency, rate or extent of cardiac conduction. GOC:BHF GOC:TermGenie GOC:mtg_cardiac_conduct_nov11 GOC:rph GO_REF:0000058 PMID:12967627 up regulation of cardiac conduction GOC:TermGenie up-regulation of cardiac conduction GOC:TermGenie upregulation of cardiac conduction GOC:TermGenie activation of cardiac conduction GOC:TermGenie Any process that modulates the frequency, rate or extent of amino acid transmembrane transport. al 2015-01-08T17:42:18Z regulation of amino acid membrane transport biological_process GO:1903789 regulation of amino acid transmembrane transport GO:1903789 Any process that modulates the frequency, rate or extent of amino acid transmembrane transport. GOC:TermGenie GO_REF:0000058 PMID:16115814 regulation of amino acid membrane transport GOC:TermGenie Any process that modulates the frequency, rate or extent of inorganic anion transmembrane transport. sl 2015-01-14T21:44:49Z regulation of inorganic anion membrane transport regulation of transmembrane inorganic anion transport biological_process GO:1903795 regulation of inorganic anion transmembrane transport GO:1903795 Any process that modulates the frequency, rate or extent of inorganic anion transmembrane transport. GOC:TermGenie GO_REF:0000058 PMID:11336802 regulation of inorganic anion membrane transport GOC:TermGenie regulation of transmembrane inorganic anion transport GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of inorganic anion transmembrane transport. sl 2015-01-14T21:44:59Z down regulation of inorganic anion membrane transport down regulation of inorganic anion transmembrane transport down regulation of transmembrane inorganic anion transport down-regulation of inorganic anion membrane transport down-regulation of inorganic anion transmembrane transport down-regulation of transmembrane inorganic anion transport downregulation of inorganic anion membrane transport downregulation of inorganic anion transmembrane transport downregulation of transmembrane inorganic anion transport negative regulation of inorganic anion membrane transport negative regulation of transmembrane inorganic anion transport inhibition of inorganic anion membrane transport inhibition of inorganic anion transmembrane transport inhibition of transmembrane inorganic anion transport biological_process GO:1903796 negative regulation of inorganic anion transmembrane transport GO:1903796 Any process that stops, prevents or reduces the frequency, rate or extent of inorganic anion transmembrane transport. GOC:TermGenie GO_REF:0000058 PMID:11336802 down regulation of inorganic anion membrane transport GOC:TermGenie down regulation of inorganic anion transmembrane transport GOC:TermGenie down regulation of transmembrane inorganic anion transport GOC:TermGenie down-regulation of inorganic anion membrane transport GOC:TermGenie down-regulation of inorganic anion transmembrane transport GOC:TermGenie down-regulation of transmembrane inorganic anion transport GOC:TermGenie downregulation of inorganic anion membrane transport GOC:TermGenie downregulation of inorganic anion transmembrane transport GOC:TermGenie downregulation of transmembrane inorganic anion transport GOC:TermGenie negative regulation of inorganic anion membrane transport GOC:TermGenie negative regulation of transmembrane inorganic anion transport GOC:TermGenie inhibition of inorganic anion membrane transport GOC:TermGenie inhibition of inorganic anion transmembrane transport GOC:TermGenie inhibition of transmembrane inorganic anion transport GOC:TermGenie Any process that activates or increases the frequency, rate or extent of inorganic anion transmembrane transport. sl 2015-01-14T21:45:08Z positive regulation of inorganic anion membrane transport positive regulation of transmembrane inorganic anion transport up regulation of inorganic anion membrane transport up regulation of inorganic anion transmembrane transport up regulation of transmembrane inorganic anion transport up-regulation of inorganic anion membrane transport up-regulation of inorganic anion transmembrane transport up-regulation of transmembrane inorganic anion transport upregulation of inorganic anion membrane transport upregulation of inorganic anion transmembrane transport upregulation of transmembrane inorganic anion transport activation of inorganic anion membrane transport activation of inorganic anion transmembrane transport activation of transmembrane inorganic anion transport biological_process GO:1903797 positive regulation of inorganic anion transmembrane transport GO:1903797 Any process that activates or increases the frequency, rate or extent of inorganic anion transmembrane transport. GOC:TermGenie GO_REF:0000058 PMID:11336802 positive regulation of inorganic anion membrane transport GOC:TermGenie positive regulation of transmembrane inorganic anion transport GOC:TermGenie up regulation of inorganic anion membrane transport GOC:TermGenie up regulation of inorganic anion transmembrane transport GOC:TermGenie up regulation of transmembrane inorganic anion transport GOC:TermGenie up-regulation of inorganic anion membrane transport GOC:TermGenie up-regulation of inorganic anion transmembrane transport GOC:TermGenie up-regulation of transmembrane inorganic anion transport GOC:TermGenie upregulation of inorganic anion membrane transport GOC:TermGenie upregulation of inorganic anion transmembrane transport GOC:TermGenie upregulation of transmembrane inorganic anion transport GOC:TermGenie activation of inorganic anion membrane transport GOC:TermGenie activation of inorganic anion transmembrane transport GOC:TermGenie activation of transmembrane inorganic anion transport GOC:TermGenie The process in which an organic acid is transported across a membrane. vw 2015-01-20T10:20:58Z biological_process GO:1903825 organic acid transmembrane transport GO:1903825 The process in which an organic acid is transported across a membrane. GOC:TermGenie GO_REF:0000069 Any process that stops, prevents or reduces the frequency, rate or extent of a protein localization. jl 2015-01-20T14:32:24Z down regulation of cellular protein localisation down regulation of cellular protein localization down-regulation of cellular protein localisation down-regulation of cellular protein localization downregulation of cellular protein localisation downregulation of cellular protein localization negative regulation of cellular protein localisation negative regulation of cellular protein localization inhibition of cellular protein localisation inhibition of cellular protein localization biological_process GO:1903828 negative regulation of protein localization GO:1903828 Any process that stops, prevents or reduces the frequency, rate or extent of a protein localization. GOC:TermGenie GOC:vw GO_REF:0000058 down regulation of cellular protein localisation GOC:TermGenie down regulation of cellular protein localization GOC:TermGenie down-regulation of cellular protein localisation GOC:TermGenie down-regulation of cellular protein localization GOC:TermGenie downregulation of cellular protein localisation GOC:TermGenie downregulation of cellular protein localization GOC:TermGenie negative regulation of cellular protein localisation GOC:TermGenie inhibition of cellular protein localisation GOC:TermGenie inhibition of cellular protein localization GOC:TermGenie Any process that activates or increases the frequency, rate or extent of a protein localization. jl 2015-01-20T14:32:33Z positive regulation of cellular protein localisation positive regulation of cellular protein localization up regulation of cellular protein localisation up regulation of cellular protein localization up-regulation of cellular protein localisation up-regulation of cellular protein localization upregulation of cellular protein localisation upregulation of cellular protein localization biological_process GO:1903829 positive regulation of protein localization GO:1903829 Any process that activates or increases the frequency, rate or extent of a protein localization. GOC:TermGenie GOC:vw GO_REF:0000058 positive regulation of cellular protein localisation GOC:TermGenie up regulation of cellular protein localisation GOC:TermGenie up regulation of cellular protein localization GOC:TermGenie up-regulation of cellular protein localisation GOC:TermGenie up-regulation of cellular protein localization GOC:TermGenie upregulation of cellular protein localisation GOC:TermGenie upregulation of cellular protein localization GOC:TermGenie Any process that modulates the frequency, rate or extent of aorta morphogenesis. rph 2015-01-23T14:00:51Z biological_process GO:1903847 regulation of aorta morphogenesis GO:1903847 Any process that modulates the frequency, rate or extent of aorta morphogenesis. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:22269326 Any process that stops, prevents or reduces the frequency, rate or extent of aorta morphogenesis. rph 2015-01-23T14:01:01Z down regulation of aorta morphogenesis down-regulation of aorta morphogenesis downregulation of aorta morphogenesis inhibition of aorta morphogenesis biological_process GO:1903848 negative regulation of aorta morphogenesis GO:1903848 Any process that stops, prevents or reduces the frequency, rate or extent of aorta morphogenesis. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:22269326 down regulation of aorta morphogenesis GOC:TermGenie down-regulation of aorta morphogenesis GOC:TermGenie downregulation of aorta morphogenesis GOC:TermGenie inhibition of aorta morphogenesis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of aorta morphogenesis. rph 2015-01-23T14:01:09Z up regulation of aorta morphogenesis up-regulation of aorta morphogenesis upregulation of aorta morphogenesis activation of aorta morphogenesis biological_process GO:1903849 positive regulation of aorta morphogenesis GO:1903849 Any process that activates or increases the frequency, rate or extent of aorta morphogenesis. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:22269326 up regulation of aorta morphogenesis GOC:TermGenie up-regulation of aorta morphogenesis GOC:TermGenie upregulation of aorta morphogenesis GOC:TermGenie activation of aorta morphogenesis GOC:TermGenie The process whose specific outcome is the progression of an extraembryonic membrane over time, from its formation to the mature structure. cjm 2015-02-05T00:42:16Z biological_process GO:1903867 extraembryonic membrane development GO:1903867 The process whose specific outcome is the progression of an extraembryonic membrane over time, from its formation to the mature structure. GOC:TermGenie GO_REF:0000094 ISBN:0073040584 Any process that stops, prevents or reduces the frequency, rate or extent of respiratory gaseous exchange. sl 2015-02-17T20:26:24Z down regulation of respiratory gaseous exchange down-regulation of respiratory gaseous exchange downregulation of respiratory gaseous exchange inhibition of respiratory gaseous exchange biological_process GO:1903941 negative regulation of respiratory gaseous exchange GO:1903941 Any process that stops, prevents or reduces the frequency, rate or extent of respiratory gaseous exchange. GOC:TermGenie GO_REF:0000058 PMID:22819705 down regulation of respiratory gaseous exchange GOC:TermGenie down-regulation of respiratory gaseous exchange GOC:TermGenie downregulation of respiratory gaseous exchange GOC:TermGenie inhibition of respiratory gaseous exchange GOC:TermGenie Any process that activates or increases the frequency, rate or extent of respiratory gaseous exchange. sl 2015-02-17T20:26:35Z up regulation of respiratory gaseous exchange up-regulation of respiratory gaseous exchange upregulation of respiratory gaseous exchange activation of respiratory gaseous exchange biological_process GO:1903942 positive regulation of respiratory gaseous exchange GO:1903942 Any process that activates or increases the frequency, rate or extent of respiratory gaseous exchange. GOC:TermGenie GO_REF:0000058 PMID:22819705 up regulation of respiratory gaseous exchange GOC:TermGenie up-regulation of respiratory gaseous exchange GOC:TermGenie upregulation of respiratory gaseous exchange GOC:TermGenie activation of respiratory gaseous exchange GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of AV node cell action potential. nc 2015-02-20T14:59:41Z down regulation of AV node cardiac muscle cell action potential down regulation of AV node cell action potential down regulation of atrioventricular node cardiac muscle cell action potential down-regulation of AV node cardiac muscle cell action potential down-regulation of AV node cell action potential down-regulation of atrioventricular node cardiac muscle cell action potential downregulation of AV node cardiac muscle cell action potential downregulation of AV node cell action potential downregulation of atrioventricular node cardiac muscle cell action potential negative regulation of AV node cardiac muscle cell action potential negative regulation of atrioventricular node cardiac muscle cell action potential inhibition of AV node cardiac muscle cell action potential inhibition of AV node cell action potential inhibition of atrioventricular node cardiac muscle cell action potential biological_process GO:1903950 negative regulation of AV node cell action potential GO:1903950 Any process that stops, prevents or reduces the frequency, rate or extent of AV node cell action potential. GOC:BHF GOC:TermGenie GOC:mtg_cardiac_conduct_nov11 GOC:nc GO_REF:0000058 PMID:25281747 down regulation of AV node cardiac muscle cell action potential GOC:TermGenie down regulation of AV node cell action potential GOC:TermGenie down regulation of atrioventricular node cardiac muscle cell action potential GOC:TermGenie down-regulation of AV node cardiac muscle cell action potential GOC:TermGenie down-regulation of AV node cell action potential GOC:TermGenie down-regulation of atrioventricular node cardiac muscle cell action potential GOC:TermGenie downregulation of AV node cardiac muscle cell action potential GOC:TermGenie downregulation of AV node cell action potential GOC:TermGenie downregulation of atrioventricular node cardiac muscle cell action potential GOC:TermGenie negative regulation of AV node cardiac muscle cell action potential GOC:TermGenie negative regulation of atrioventricular node cardiac muscle cell action potential GOC:TermGenie inhibition of AV node cardiac muscle cell action potential GOC:TermGenie inhibition of AV node cell action potential GOC:TermGenie inhibition of atrioventricular node cardiac muscle cell action potential GOC:TermGenie Any process that activates or increases the frequency, rate or extent of AV node cell action potential. nc 2015-02-20T14:59:50Z positive regulation of AV node cardiac muscle cell action potential positive regulation of atrioventricular node cardiac muscle cell action potential up regulation of AV node cardiac muscle cell action potential up regulation of AV node cell action potential up regulation of atrioventricular node cardiac muscle cell action potential up-regulation of AV node cardiac muscle cell action potential up-regulation of AV node cell action potential up-regulation of atrioventricular node cardiac muscle cell action potential upregulation of AV node cardiac muscle cell action potential upregulation of AV node cell action potential upregulation of atrioventricular node cardiac muscle cell action potential activation of AV node cardiac muscle cell action potential activation of AV node cell action potential activation of atrioventricular node cardiac muscle cell action potential biological_process GO:1903951 positive regulation of AV node cell action potential GO:1903951 Any process that activates or increases the frequency, rate or extent of AV node cell action potential. GOC:BHF GOC:TermGenie GOC:mtg_cardiac_conduct_nov11 GOC:nc GO_REF:0000058 PMID:25281747 positive regulation of AV node cardiac muscle cell action potential GOC:TermGenie positive regulation of atrioventricular node cardiac muscle cell action potential GOC:TermGenie up regulation of AV node cardiac muscle cell action potential GOC:TermGenie up regulation of AV node cell action potential GOC:TermGenie up regulation of atrioventricular node cardiac muscle cell action potential GOC:TermGenie up-regulation of AV node cardiac muscle cell action potential GOC:TermGenie up-regulation of AV node cell action potential GOC:TermGenie up-regulation of atrioventricular node cardiac muscle cell action potential GOC:TermGenie upregulation of AV node cardiac muscle cell action potential GOC:TermGenie upregulation of AV node cell action potential GOC:TermGenie upregulation of atrioventricular node cardiac muscle cell action potential GOC:TermGenie activation of AV node cardiac muscle cell action potential GOC:TermGenie activation of AV node cell action potential GOC:TermGenie activation of atrioventricular node cardiac muscle cell action potential GOC:TermGenie Any process that modulates the frequency, rate or extent of glial cell migration. nc 2015-03-02T15:13:31Z regulation of glia cell migration biological_process GO:1903975 regulation of glial cell migration GO:1903975 Any process that modulates the frequency, rate or extent of glial cell migration. GOC:BHF GOC:TermGenie GOC:nc GO_REF:0000058 PMID:19100238 regulation of glia cell migration GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of glial cell migration. nc 2015-03-02T15:13:38Z down regulation of glia cell migration down regulation of glial cell migration down-regulation of glia cell migration down-regulation of glial cell migration downregulation of glia cell migration downregulation of glial cell migration negative regulation of glia cell migration inhibition of glia cell migration inhibition of glial cell migration biological_process GO:1903976 negative regulation of glial cell migration GO:1903976 Any process that stops, prevents or reduces the frequency, rate or extent of glial cell migration. GOC:BHF GOC:TermGenie GOC:nc GO_REF:0000058 PMID:19100238 down regulation of glia cell migration GOC:TermGenie down regulation of glial cell migration GOC:TermGenie down-regulation of glia cell migration GOC:TermGenie down-regulation of glial cell migration GOC:TermGenie downregulation of glia cell migration GOC:TermGenie downregulation of glial cell migration GOC:TermGenie negative regulation of glia cell migration GOC:TermGenie inhibition of glia cell migration GOC:TermGenie inhibition of glial cell migration GOC:TermGenie Any process that activates or increases the frequency, rate or extent of glial cell migration. nc 2015-03-02T15:13:43Z positive regulation of glia cell migration up regulation of glia cell migration up regulation of glial cell migration up-regulation of glia cell migration up-regulation of glial cell migration upregulation of glia cell migration upregulation of glial cell migration activation of glia cell migration activation of glial cell migration biological_process GO:1903977 positive regulation of glial cell migration GO:1903977 Any process that activates or increases the frequency, rate or extent of glial cell migration. GOC:BHF GOC:TermGenie GOC:nc GO_REF:0000058 PMID:19100238 positive regulation of glia cell migration GOC:TermGenie up regulation of glia cell migration GOC:TermGenie up regulation of glial cell migration GOC:TermGenie up-regulation of glia cell migration GOC:TermGenie up-regulation of glial cell migration GOC:TermGenie upregulation of glia cell migration GOC:TermGenie upregulation of glial cell migration GOC:TermGenie activation of glia cell migration GOC:TermGenie activation of glial cell migration GOC:TermGenie Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a serotonin stimulus. sl 2015-03-06T19:33:54Z biological_process GO:1904014 response to serotonin GO:1904014 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a serotonin stimulus. GOC:TermGenie GO_REF:0000071 PMID:1505525 Any process that activates or increases the frequency, rate or extent of vasculature development. sl 2015-03-06T22:17:04Z up regulation of vasculature development up-regulation of vasculature development upregulation of vasculature development activation of vasculature development biological_process activation of vascular system development positive regulation of vascular system development up regulation of vascular system development up-regulation of vascular system development upregulation of vascular system development GO:1904018 positive regulation of vasculature development GO:1904018 Any process that activates or increases the frequency, rate or extent of vasculature development. GOC:TermGenie GO_REF:0000058 PMID:21472453 up regulation of vasculature development GOC:TermGenie up-regulation of vasculature development GOC:TermGenie upregulation of vasculature development GOC:TermGenie activation of vasculature development GOC:TermGenie activation of vascular system development GOC:TermGenie positive regulation of vascular system development GOC:TermGenie up regulation of vascular system development GOC:TermGenie up-regulation of vascular system development GOC:TermGenie upregulation of vascular system development GOC:TermGenie Any apoptotic process in an epithelial cell. sl 2015-03-06T22:27:17Z epitheliocyte apoptotic process epithelial cell apoptosis epitheliocyte apoptosis biological_process GO:1904019 epithelial cell apoptotic process GO:1904019 Any apoptotic process in an epithelial cell. GOC:TermGenie GO_REF:0000085 PMID:19137015 epitheliocyte apoptotic process GOC:TermGenie epithelial cell apoptosis GOC:TermGenie epitheliocyte apoptosis GOC:TermGenie Any process that modulates the frequency, rate or extent of collagen fibril organization. ae 2015-03-12T12:36:52Z regulation of collagen fibril organisation regulation of fibrillar collagen organization biological_process regulation of collagen fibrillogenesis GO:1904026 regulation of collagen fibril organization GO:1904026 Any process that modulates the frequency, rate or extent of collagen fibril organization. GOC:TermGenie GO_REF:0000058 PMID:25451920 regulation of collagen fibril organisation GOC:TermGenie regulation of fibrillar collagen organization GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of collagen fibril organization. ae 2015-03-12T12:36:59Z down regulation of collagen fibril organisation down regulation of collagen fibril organization down regulation of fibrillar collagen organization down-regulation of collagen fibril organisation down-regulation of collagen fibril organization down-regulation of fibrillar collagen organization downregulation of collagen fibril organisation downregulation of collagen fibril organization downregulation of fibrillar collagen organization negative regulation of collagen fibril organisation negative regulation of fibrillar collagen organization inhibition of collagen fibril organisation inhibition of collagen fibril organization inhibition of fibrillar collagen organization biological_process GO:1904027 negative regulation of collagen fibril organization GO:1904027 Any process that stops, prevents or reduces the frequency, rate or extent of collagen fibril organization. GOC:TermGenie GO_REF:0000058 PMID:25451920 down regulation of collagen fibril organisation GOC:TermGenie down regulation of collagen fibril organization GOC:TermGenie down regulation of fibrillar collagen organization GOC:TermGenie down-regulation of collagen fibril organisation GOC:TermGenie down-regulation of collagen fibril organization GOC:TermGenie down-regulation of fibrillar collagen organization GOC:TermGenie downregulation of collagen fibril organisation GOC:TermGenie downregulation of collagen fibril organization GOC:TermGenie downregulation of fibrillar collagen organization GOC:TermGenie negative regulation of collagen fibril organisation GOC:TermGenie negative regulation of fibrillar collagen organization GOC:TermGenie inhibition of collagen fibril organisation GOC:TermGenie inhibition of collagen fibril organization GOC:TermGenie inhibition of fibrillar collagen organization GOC:TermGenie Any process that activates or increases the frequency, rate or extent of collagen fibril organization. ae 2015-03-12T12:37:06Z positive regulation of collagen fibril organisation positive regulation of fibrillar collagen organization up regulation of collagen fibril organisation up regulation of collagen fibril organization up regulation of fibrillar collagen organization up-regulation of collagen fibril organisation up-regulation of collagen fibril organization up-regulation of fibrillar collagen organization upregulation of collagen fibril organisation upregulation of collagen fibril organization upregulation of fibrillar collagen organization activation of collagen fibril organisation activation of collagen fibril organization activation of fibrillar collagen organization biological_process GO:1904028 positive regulation of collagen fibril organization GO:1904028 Any process that activates or increases the frequency, rate or extent of collagen fibril organization. GOC:TermGenie GO_REF:0000058 PMID:25451920 positive regulation of collagen fibril organisation GOC:TermGenie positive regulation of fibrillar collagen organization GOC:TermGenie up regulation of collagen fibril organisation GOC:TermGenie up regulation of collagen fibril organization GOC:TermGenie up regulation of fibrillar collagen organization GOC:TermGenie up-regulation of collagen fibril organisation GOC:TermGenie up-regulation of collagen fibril organization GOC:TermGenie up-regulation of fibrillar collagen organization GOC:TermGenie upregulation of collagen fibril organisation GOC:TermGenie upregulation of collagen fibril organization GOC:TermGenie upregulation of fibrillar collagen organization GOC:TermGenie activation of collagen fibril organisation GOC:TermGenie activation of collagen fibril organization GOC:TermGenie activation of fibrillar collagen organization GOC:TermGenie Any process that modulates the frequency, rate or extent of epithelial cell apoptotic process. sl 2015-03-13T22:05:41Z regulation of epitheliocyte apoptotic process regulation of epithelial cell apoptosis regulation of epitheliocyte apoptosis biological_process GO:1904035 regulation of epithelial cell apoptotic process GO:1904035 Any process that modulates the frequency, rate or extent of epithelial cell apoptotic process. GOC:TermGenie GO_REF:0000058 PMID:19137015 regulation of epitheliocyte apoptotic process GOC:TermGenie regulation of epithelial cell apoptosis GOC:TermGenie regulation of epitheliocyte apoptosis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell apoptotic process. sl 2015-03-13T22:05:47Z down regulation of epithelial cell apoptotic process down regulation of epitheliocyte apoptotic process down-regulation of epithelial cell apoptotic process down-regulation of epitheliocyte apoptotic process downregulation of epithelial cell apoptotic process downregulation of epitheliocyte apoptotic process negative regulation of epitheliocyte apoptotic process down regulation of epithelial cell apoptosis down regulation of epitheliocyte apoptosis down-regulation of epithelial cell apoptosis down-regulation of epitheliocyte apoptosis downregulation of epithelial cell apoptosis downregulation of epitheliocyte apoptosis inhibition of epithelial cell apoptosis inhibition of epithelial cell apoptotic process inhibition of epitheliocyte apoptosis inhibition of epitheliocyte apoptotic process negative regulation of epithelial cell apoptosis negative regulation of epitheliocyte apoptosis biological_process GO:1904036 negative regulation of epithelial cell apoptotic process GO:1904036 Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell apoptotic process. GOC:TermGenie GO_REF:0000058 PMID:19137015 down regulation of epithelial cell apoptotic process GOC:TermGenie down regulation of epitheliocyte apoptotic process GOC:TermGenie down-regulation of epithelial cell apoptotic process GOC:TermGenie down-regulation of epitheliocyte apoptotic process GOC:TermGenie downregulation of epithelial cell apoptotic process GOC:TermGenie downregulation of epitheliocyte apoptotic process GOC:TermGenie negative regulation of epitheliocyte apoptotic process GOC:TermGenie down regulation of epithelial cell apoptosis GOC:TermGenie down regulation of epitheliocyte apoptosis GOC:TermGenie down-regulation of epithelial cell apoptosis GOC:TermGenie down-regulation of epitheliocyte apoptosis GOC:TermGenie downregulation of epithelial cell apoptosis GOC:TermGenie downregulation of epitheliocyte apoptosis GOC:TermGenie inhibition of epithelial cell apoptosis GOC:TermGenie inhibition of epithelial cell apoptotic process GOC:TermGenie inhibition of epitheliocyte apoptosis GOC:TermGenie inhibition of epitheliocyte apoptotic process GOC:TermGenie negative regulation of epithelial cell apoptosis GOC:TermGenie negative regulation of epitheliocyte apoptosis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of epithelial cell apoptotic process. sl 2015-03-13T22:05:53Z positive regulation of epitheliocyte apoptotic process up regulation of epithelial cell apoptotic process up regulation of epitheliocyte apoptotic process up-regulation of epithelial cell apoptotic process up-regulation of epitheliocyte apoptotic process upregulation of epithelial cell apoptotic process upregulation of epitheliocyte apoptotic process activation of epithelial cell apoptosis activation of epithelial cell apoptotic process activation of epitheliocyte apoptosis activation of epitheliocyte apoptotic process positive regulation of epithelial cell apoptosis positive regulation of epitheliocyte apoptosis up regulation of epithelial cell apoptosis up regulation of epitheliocyte apoptosis up-regulation of epithelial cell apoptosis up-regulation of epitheliocyte apoptosis upregulation of epithelial cell apoptosis upregulation of epitheliocyte apoptosis biological_process GO:1904037 positive regulation of epithelial cell apoptotic process GO:1904037 Any process that activates or increases the frequency, rate or extent of epithelial cell apoptotic process. GOC:TermGenie GO_REF:0000058 PMID:19137015 positive regulation of epitheliocyte apoptotic process GOC:TermGenie up regulation of epithelial cell apoptotic process GOC:TermGenie up regulation of epitheliocyte apoptotic process GOC:TermGenie up-regulation of epithelial cell apoptotic process GOC:TermGenie up-regulation of epitheliocyte apoptotic process GOC:TermGenie upregulation of epithelial cell apoptotic process GOC:TermGenie upregulation of epitheliocyte apoptotic process GOC:TermGenie activation of epithelial cell apoptosis GOC:TermGenie activation of epithelial cell apoptotic process GOC:TermGenie activation of epitheliocyte apoptosis GOC:TermGenie activation of epitheliocyte apoptotic process GOC:TermGenie positive regulation of epithelial cell apoptosis GOC:TermGenie positive regulation of epitheliocyte apoptosis GOC:TermGenie up regulation of epithelial cell apoptosis GOC:TermGenie up regulation of epitheliocyte apoptosis GOC:TermGenie up-regulation of epithelial cell apoptosis GOC:TermGenie up-regulation of epitheliocyte apoptosis GOC:TermGenie upregulation of epithelial cell apoptosis GOC:TermGenie upregulation of epitheliocyte apoptosis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of sensory perception of pain. sl 2015-03-18T20:33:57Z down regulation of nociception down regulation of sensory perception of pain down-regulation of nociception down-regulation of sensory perception of pain downregulation of nociception downregulation of sensory perception of pain negative regulation of nociception down regulation of perception of physiological pain down-regulation of perception of physiological pain downregulation of perception of physiological pain inhibition of nociception inhibition of perception of physiological pain inhibition of sensory perception of pain negative regulation of perception of physiological pain biological_process GO:1904057 negative regulation of sensory perception of pain GO:1904057 Any process that stops, prevents or reduces the frequency, rate or extent of sensory perception of pain. GOC:TermGenie GO_REF:0000058 PMID:17167094 down regulation of nociception GOC:TermGenie down regulation of sensory perception of pain GOC:TermGenie down-regulation of nociception GOC:TermGenie down-regulation of sensory perception of pain GOC:TermGenie downregulation of nociception GOC:TermGenie downregulation of sensory perception of pain GOC:TermGenie negative regulation of nociception GOC:TermGenie down regulation of perception of physiological pain GOC:TermGenie down-regulation of perception of physiological pain GOC:TermGenie downregulation of perception of physiological pain GOC:TermGenie inhibition of nociception GOC:TermGenie inhibition of perception of physiological pain GOC:TermGenie inhibition of sensory perception of pain GOC:TermGenie negative regulation of perception of physiological pain GOC:TermGenie Any process that activates or increases the frequency, rate or extent of sensory perception of pain. sl 2015-03-18T20:34:03Z positive regulation of nociception up regulation of nociception up regulation of sensory perception of pain up-regulation of nociception up-regulation of sensory perception of pain upregulation of nociception upregulation of sensory perception of pain activation of nociception activation of perception of physiological pain activation of sensory perception of pain positive regulation of perception of physiological pain up regulation of perception of physiological pain up-regulation of perception of physiological pain upregulation of perception of physiological pain biological_process GO:1904058 positive regulation of sensory perception of pain GO:1904058 Any process that activates or increases the frequency, rate or extent of sensory perception of pain. GOC:TermGenie GO_REF:0000058 PMID:17167094 positive regulation of nociception GOC:TermGenie up regulation of nociception GOC:TermGenie up regulation of sensory perception of pain GOC:TermGenie up-regulation of nociception GOC:TermGenie up-regulation of sensory perception of pain GOC:TermGenie upregulation of nociception GOC:TermGenie upregulation of sensory perception of pain GOC:TermGenie activation of nociception GOC:TermGenie activation of perception of physiological pain GOC:TermGenie activation of sensory perception of pain GOC:TermGenie positive regulation of perception of physiological pain GOC:TermGenie up regulation of perception of physiological pain GOC:TermGenie up-regulation of perception of physiological pain GOC:TermGenie upregulation of perception of physiological pain GOC:TermGenie Any process that modulates the frequency, rate or extent of trophectodermal cell proliferation. tb 2015-03-20T16:55:56Z regulation of trophectoderm cell proliferation biological_process GO:1904073 regulation of trophectodermal cell proliferation GO:1904073 Any process that modulates the frequency, rate or extent of trophectodermal cell proliferation. GOC:TermGenie GO_REF:0000058 PMID:24508636 regulation of trophectoderm cell proliferation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of trophectodermal cell proliferation. tb 2015-03-20T16:56:02Z down regulation of trophectoderm cell proliferation down regulation of trophectodermal cell proliferation down-regulation of trophectoderm cell proliferation down-regulation of trophectodermal cell proliferation downregulation of trophectoderm cell proliferation downregulation of trophectodermal cell proliferation negative regulation of trophectoderm cell proliferation inhibition of trophectoderm cell proliferation inhibition of trophectodermal cell proliferation biological_process GO:1904074 negative regulation of trophectodermal cell proliferation GO:1904074 Any process that stops, prevents or reduces the frequency, rate or extent of trophectodermal cell proliferation. GOC:TermGenie GO_REF:0000058 PMID:24508636 down regulation of trophectoderm cell proliferation GOC:TermGenie down regulation of trophectodermal cell proliferation GOC:TermGenie down-regulation of trophectoderm cell proliferation GOC:TermGenie down-regulation of trophectodermal cell proliferation GOC:TermGenie downregulation of trophectoderm cell proliferation GOC:TermGenie downregulation of trophectodermal cell proliferation GOC:TermGenie negative regulation of trophectoderm cell proliferation GOC:TermGenie inhibition of trophectoderm cell proliferation GOC:TermGenie inhibition of trophectodermal cell proliferation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of trophectodermal cell proliferation. tb 2015-03-20T16:56:08Z positive regulation of trophectoderm cell proliferation up regulation of trophectoderm cell proliferation up regulation of trophectodermal cell proliferation up-regulation of trophectoderm cell proliferation up-regulation of trophectodermal cell proliferation upregulation of trophectoderm cell proliferation upregulation of trophectodermal cell proliferation activation of trophectoderm cell proliferation activation of trophectodermal cell proliferation biological_process GO:1904075 positive regulation of trophectodermal cell proliferation GO:1904075 Any process that activates or increases the frequency, rate or extent of trophectodermal cell proliferation. GOC:TermGenie GO_REF:0000058 PMID:24508636 positive regulation of trophectoderm cell proliferation GOC:TermGenie up regulation of trophectoderm cell proliferation GOC:TermGenie up regulation of trophectodermal cell proliferation GOC:TermGenie up-regulation of trophectoderm cell proliferation GOC:TermGenie up-regulation of trophectodermal cell proliferation GOC:TermGenie upregulation of trophectoderm cell proliferation GOC:TermGenie upregulation of trophectodermal cell proliferation GOC:TermGenie activation of trophectoderm cell proliferation GOC:TermGenie activation of trophectodermal cell proliferation GOC:TermGenie Any cytoplasm that is part of a axon. sl 2015-04-06T18:13:14Z axoplasm cellular_component GO:1904115 axon cytoplasm GO:1904115 Any cytoplasm that is part of a axon. GOC:TermGenie GO_REF:0000064 PMID:18667152 Any process that stops, prevents or reduces the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation. tb 2015-04-14T15:59:22Z down regulation of meiotic cell cycle process involved in oocyte maturation down-regulation of meiotic cell cycle process involved in oocyte maturation downregulation of meiotic cell cycle process involved in oocyte maturation inhibition of meiotic cell cycle process involved in oocyte maturation biological_process GO:1904145 negative regulation of meiotic cell cycle process involved in oocyte maturation GO:1904145 Any process that stops, prevents or reduces the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation. GOC:TermGenie GO_REF:0000058 PMID:22674394 down regulation of meiotic cell cycle process involved in oocyte maturation GOC:TermGenie down-regulation of meiotic cell cycle process involved in oocyte maturation GOC:TermGenie downregulation of meiotic cell cycle process involved in oocyte maturation GOC:TermGenie inhibition of meiotic cell cycle process involved in oocyte maturation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation. tb 2015-04-14T15:59:28Z up regulation of meiotic cell cycle process involved in oocyte maturation up-regulation of meiotic cell cycle process involved in oocyte maturation upregulation of meiotic cell cycle process involved in oocyte maturation activation of meiotic cell cycle process involved in oocyte maturation biological_process GO:1904146 positive regulation of meiotic cell cycle process involved in oocyte maturation GO:1904146 Any process that activates or increases the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation. GOC:TermGenie GO_REF:0000058 PMID:22674394 up regulation of meiotic cell cycle process involved in oocyte maturation GOC:TermGenie up-regulation of meiotic cell cycle process involved in oocyte maturation GOC:TermGenie upregulation of meiotic cell cycle process involved in oocyte maturation GOC:TermGenie activation of meiotic cell cycle process involved in oocyte maturation GOC:TermGenie Any process that modulates the frequency, rate or extent of bleb assembly. als 2015-04-23T09:32:19Z regulation of cell blebbing biological_process GO:1904170 regulation of bleb assembly GO:1904170 Any process that modulates the frequency, rate or extent of bleb assembly. GOC:TermGenie GOC:als GO_REF:0000058 PMID:25651887 regulation of cell blebbing GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of bleb assembly. als 2015-04-23T09:32:25Z down regulation of bleb assembly down regulation of cell blebbing down-regulation of bleb assembly down-regulation of cell blebbing downregulation of bleb assembly downregulation of cell blebbing negative regulation of cell blebbing inhibition of bleb assembly inhibition of cell blebbing biological_process GO:1904171 negative regulation of bleb assembly GO:1904171 Any process that stops, prevents or reduces the frequency, rate or extent of bleb assembly. GOC:TermGenie GOC:als GO_REF:0000058 PMID:25651887 down regulation of bleb assembly GOC:TermGenie down regulation of cell blebbing GOC:TermGenie down-regulation of bleb assembly GOC:TermGenie down-regulation of cell blebbing GOC:TermGenie downregulation of bleb assembly GOC:TermGenie downregulation of cell blebbing GOC:TermGenie negative regulation of cell blebbing GOC:TermGenie inhibition of bleb assembly GOC:TermGenie inhibition of cell blebbing GOC:TermGenie Any process that activates or increases the frequency, rate or extent of bleb assembly. als 2015-04-23T09:32:31Z positive regulation of cell blebbing up regulation of bleb assembly up regulation of cell blebbing up-regulation of bleb assembly up-regulation of cell blebbing upregulation of bleb assembly upregulation of cell blebbing activation of bleb assembly activation of cell blebbing biological_process GO:1904172 positive regulation of bleb assembly GO:1904172 Any process that activates or increases the frequency, rate or extent of bleb assembly. GOC:TermGenie GOC:als GO_REF:0000058 PMID:25651887 positive regulation of cell blebbing GOC:TermGenie up regulation of bleb assembly GOC:TermGenie up regulation of cell blebbing GOC:TermGenie up-regulation of bleb assembly GOC:TermGenie up-regulation of cell blebbing GOC:TermGenie upregulation of bleb assembly GOC:TermGenie upregulation of cell blebbing GOC:TermGenie activation of bleb assembly GOC:TermGenie activation of cell blebbing GOC:TermGenie Any process that modulates the frequency, rate or extent of adipose tissue development. sl 2015-04-29T20:01:01Z Reactome:R-HSA-9843745 biological_process regulation of adipogenesis GO:1904177 regulation of adipose tissue development GO:1904177 Any process that modulates the frequency, rate or extent of adipose tissue development. GOC:TermGenie GO_REF:0000058 PMID:23081848 Reactome:R-HSA-9843745 Adipogenesis regulation of adipogenesis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of adipose tissue development. sl 2015-04-29T20:01:07Z down regulation of adipose tissue development down-regulation of adipose tissue development downregulation of adipose tissue development inhibition of adipose tissue development biological_process down regulation of adipogenesis down-regulation of adipogenesis downregulation of adipogenesis inhibition of adipogenesis negative regulation of adipogenesis GO:1904178 negative regulation of adipose tissue development GO:1904178 Any process that stops, prevents or reduces the frequency, rate or extent of adipose tissue development. GOC:TermGenie GO_REF:0000058 PMID:23081848 down regulation of adipose tissue development GOC:TermGenie down-regulation of adipose tissue development GOC:TermGenie downregulation of adipose tissue development GOC:TermGenie inhibition of adipose tissue development GOC:TermGenie down regulation of adipogenesis GOC:TermGenie down-regulation of adipogenesis GOC:TermGenie downregulation of adipogenesis GOC:TermGenie inhibition of adipogenesis GOC:TermGenie negative regulation of adipogenesis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of adipose tissue development. sl 2015-04-29T20:01:13Z up regulation of adipose tissue development up-regulation of adipose tissue development upregulation of adipose tissue development activation of adipose tissue development biological_process activation of adipogenesis positive regulation of adipogenesis up regulation of adipogenesis up-regulation of adipogenesis upregulation of adipogenesis GO:1904179 positive regulation of adipose tissue development GO:1904179 Any process that activates or increases the frequency, rate or extent of adipose tissue development. GOC:TermGenie GO_REF:0000058 PMID:23081848 up regulation of adipose tissue development GOC:TermGenie up-regulation of adipose tissue development GOC:TermGenie upregulation of adipose tissue development GOC:TermGenie activation of adipose tissue development GOC:TermGenie activation of adipogenesis GOC:TermGenie positive regulation of adipogenesis GOC:TermGenie up regulation of adipogenesis GOC:TermGenie up-regulation of adipogenesis GOC:TermGenie upregulation of adipogenesis GOC:TermGenie Any process that modulates the frequency, rate or extent of skeletal muscle hypertrophy. sl 2015-05-08T17:38:13Z biological_process GO:1904204 regulation of skeletal muscle hypertrophy GO:1904204 Any process that modulates the frequency, rate or extent of skeletal muscle hypertrophy. GOC:TermGenie GO_REF:0000058 PMID:23470307 Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle hypertrophy. sl 2015-05-08T17:38:19Z down regulation of skeletal muscle hypertrophy down-regulation of skeletal muscle hypertrophy downregulation of skeletal muscle hypertrophy inhibition of skeletal muscle hypertrophy biological_process GO:1904205 negative regulation of skeletal muscle hypertrophy GO:1904205 Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle hypertrophy. GOC:TermGenie GO_REF:0000058 PMID:23470307 down regulation of skeletal muscle hypertrophy GOC:TermGenie down-regulation of skeletal muscle hypertrophy GOC:TermGenie downregulation of skeletal muscle hypertrophy GOC:TermGenie inhibition of skeletal muscle hypertrophy GOC:TermGenie Any process that activates or increases the frequency, rate or extent of skeletal muscle hypertrophy. sl 2015-05-08T17:38:25Z up regulation of skeletal muscle hypertrophy up-regulation of skeletal muscle hypertrophy upregulation of skeletal muscle hypertrophy activation of skeletal muscle hypertrophy biological_process GO:1904206 positive regulation of skeletal muscle hypertrophy GO:1904206 Any process that activates or increases the frequency, rate or extent of skeletal muscle hypertrophy. GOC:TermGenie GO_REF:0000058 PMID:23470307 up regulation of skeletal muscle hypertrophy GOC:TermGenie up-regulation of skeletal muscle hypertrophy GOC:TermGenie upregulation of skeletal muscle hypertrophy GOC:TermGenie activation of skeletal muscle hypertrophy GOC:TermGenie The cell cortex of the leading edge of a cell. kmv 2015-05-28T19:16:03Z cell cortex of cell leading edge cell cortex of front of cell cell cortex of leading edge of cell cellular_component cell periphery of cell leading edge cell periphery of front of cell cell periphery of leading edge of cell peripheral cytoplasm of cell leading edge peripheral cytoplasm of front of cell peripheral cytoplasm of leading edge of cell GO:1904269 cell leading edge cell cortex GO:1904269 The cell cortex of the leading edge of a cell. GOC:TermGenie GOC:kmv GO_REF:0000064 PMID:25843030 cell cortex of cell leading edge GOC:TermGenie cell cortex of front of cell GOC:TermGenie cell cortex of leading edge of cell GOC:TermGenie cell periphery of cell leading edge GOC:TermGenie cell periphery of front of cell GOC:TermGenie cell periphery of leading edge of cell GOC:TermGenie peripheral cytoplasm of cell leading edge GOC:TermGenie peripheral cytoplasm of front of cell GOC:TermGenie peripheral cytoplasm of leading edge of cell GOC:TermGenie Any process that modulates the frequency, rate or extent of gastric mucosal blood circulation. sl 2015-06-11T21:20:31Z regulation of stomach mucosal blood circulation biological_process GO:1904344 regulation of gastric mucosal blood circulation GO:1904344 Any process that modulates the frequency, rate or extent of gastric mucosal blood circulation. GOC:TermGenie GO_REF:0000058 PMID:10807413 regulation of stomach mucosal blood circulation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of gastric mucosal blood circulation. sl 2015-06-11T21:20:44Z down regulation of gastric mucosal blood circulation down regulation of stomach mucosal blood circulation down-regulation of gastric mucosal blood circulation down-regulation of stomach mucosal blood circulation downregulation of gastric mucosal blood circulation downregulation of stomach mucosal blood circulation negative regulation of stomach mucosal blood circulation inhibition of gastric mucosal blood circulation inhibition of stomach mucosal blood circulation biological_process GO:1904345 negative regulation of gastric mucosal blood circulation GO:1904345 Any process that stops, prevents or reduces the frequency, rate or extent of gastric mucosal blood circulation. GOC:TermGenie GO_REF:0000058 PMID:10807413 down regulation of gastric mucosal blood circulation GOC:TermGenie down regulation of stomach mucosal blood circulation GOC:TermGenie down-regulation of gastric mucosal blood circulation GOC:TermGenie down-regulation of stomach mucosal blood circulation GOC:TermGenie downregulation of gastric mucosal blood circulation GOC:TermGenie downregulation of stomach mucosal blood circulation GOC:TermGenie negative regulation of stomach mucosal blood circulation GOC:TermGenie inhibition of gastric mucosal blood circulation GOC:TermGenie inhibition of stomach mucosal blood circulation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of gastric mucosal blood circulation. sl 2015-06-11T21:20:50Z positive regulation of stomach mucosal blood circulation up regulation of gastric mucosal blood circulation up regulation of stomach mucosal blood circulation up-regulation of gastric mucosal blood circulation up-regulation of stomach mucosal blood circulation upregulation of gastric mucosal blood circulation upregulation of stomach mucosal blood circulation activation of gastric mucosal blood circulation activation of stomach mucosal blood circulation biological_process GO:1904346 positive regulation of gastric mucosal blood circulation GO:1904346 Any process that activates or increases the frequency, rate or extent of gastric mucosal blood circulation. GOC:TermGenie GO_REF:0000058 PMID:10807413 positive regulation of stomach mucosal blood circulation GOC:TermGenie up regulation of gastric mucosal blood circulation GOC:TermGenie up regulation of stomach mucosal blood circulation GOC:TermGenie up-regulation of gastric mucosal blood circulation GOC:TermGenie up-regulation of stomach mucosal blood circulation GOC:TermGenie upregulation of gastric mucosal blood circulation GOC:TermGenie upregulation of stomach mucosal blood circulation GOC:TermGenie activation of gastric mucosal blood circulation GOC:TermGenie activation of stomach mucosal blood circulation GOC:TermGenie Any process that modulates the frequency, rate or extent of protein localization to cell periphery. sl 2015-06-22T22:09:25Z biological_process GO:1904375 regulation of protein localization to cell periphery GO:1904375 Any process that modulates the frequency, rate or extent of protein localization to cell periphery. GOC:TermGenie GO_REF:0000058 PMID:18216290 Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell periphery. sl 2015-06-22T22:09:32Z down regulation of protein localization to cell periphery down-regulation of protein localization to cell periphery downregulation of protein localization to cell periphery inhibition of protein localization to cell periphery biological_process GO:1904376 negative regulation of protein localization to cell periphery GO:1904376 Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell periphery. GOC:TermGenie GO_REF:0000058 PMID:18216290 down regulation of protein localization to cell periphery GOC:TermGenie down-regulation of protein localization to cell periphery GOC:TermGenie downregulation of protein localization to cell periphery GOC:TermGenie inhibition of protein localization to cell periphery GOC:TermGenie Any process that activates or increases the frequency, rate or extent of protein localization to cell periphery. sl 2015-06-22T22:09:37Z up regulation of protein localization to cell periphery up-regulation of protein localization to cell periphery upregulation of protein localization to cell periphery activation of protein localization to cell periphery biological_process GO:1904377 positive regulation of protein localization to cell periphery GO:1904377 Any process that activates or increases the frequency, rate or extent of protein localization to cell periphery. GOC:TermGenie GO_REF:0000058 PMID:18216290 up regulation of protein localization to cell periphery GOC:TermGenie up-regulation of protein localization to cell periphery GOC:TermGenie upregulation of protein localization to cell periphery GOC:TermGenie activation of protein localization to cell periphery GOC:TermGenie Any process that modulates the frequency, rate or extent of neuromuscular junction development. sl 2015-06-23T19:23:42Z regulation of neuromuscular junction organization biological_process regulation of NMJ stability regulation of neuromuscular junction stability GO:1904396 regulation of neuromuscular junction development GO:1904396 Any process that modulates the frequency, rate or extent of neuromuscular junction development. GOC:TermGenie GO_REF:0000058 PMID:7722643 regulation of neuromuscular junction organization GOC:TermGenie regulation of NMJ stability GOC:TermGenie regulation of neuromuscular junction stability GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of neuromuscular junction development. sl 2015-06-23T19:23:48Z down regulation of neuromuscular junction development down regulation of neuromuscular junction organization down-regulation of neuromuscular junction development down-regulation of neuromuscular junction organization downregulation of neuromuscular junction development downregulation of neuromuscular junction organization negative regulation of neuromuscular junction organization inhibition of neuromuscular junction development inhibition of neuromuscular junction organization biological_process down regulation of NMJ stability down regulation of neuromuscular junction stability down-regulation of NMJ stability down-regulation of neuromuscular junction stability downregulation of NMJ stability downregulation of neuromuscular junction stability inhibition of NMJ stability inhibition of neuromuscular junction stability negative regulation of NMJ stability negative regulation of neuromuscular junction stability GO:1904397 negative regulation of neuromuscular junction development GO:1904397 Any process that stops, prevents or reduces the frequency, rate or extent of neuromuscular junction development. GOC:TermGenie GO_REF:0000058 PMID:7722643 down regulation of neuromuscular junction development GOC:TermGenie down regulation of neuromuscular junction organization GOC:TermGenie down-regulation of neuromuscular junction development GOC:TermGenie down-regulation of neuromuscular junction organization GOC:TermGenie downregulation of neuromuscular junction development GOC:TermGenie downregulation of neuromuscular junction organization GOC:TermGenie negative regulation of neuromuscular junction organization GOC:TermGenie inhibition of neuromuscular junction development GOC:TermGenie inhibition of neuromuscular junction organization GOC:TermGenie down regulation of NMJ stability GOC:TermGenie down regulation of neuromuscular junction stability GOC:TermGenie down-regulation of NMJ stability GOC:TermGenie down-regulation of neuromuscular junction stability GOC:TermGenie downregulation of NMJ stability GOC:TermGenie downregulation of neuromuscular junction stability GOC:TermGenie inhibition of NMJ stability GOC:TermGenie inhibition of neuromuscular junction stability GOC:TermGenie negative regulation of NMJ stability GOC:TermGenie negative regulation of neuromuscular junction stability GOC:TermGenie Any process that activates or increases the frequency, rate or extent of neuromuscular junction development. sl 2015-06-23T19:23:54Z positive regulation of neuromuscular junction organization up regulation of neuromuscular junction development up regulation of neuromuscular junction organization up-regulation of neuromuscular junction development up-regulation of neuromuscular junction organization upregulation of neuromuscular junction development upregulation of neuromuscular junction organization activation of neuromuscular junction development activation of neuromuscular junction organization biological_process activation of NMJ stability activation of neuromuscular junction stability positive regulation of NMJ stability positive regulation of neuromuscular junction stability up regulation of NMJ stability up regulation of neuromuscular junction stability up-regulation of NMJ stability up-regulation of neuromuscular junction stability upregulation of NMJ stability upregulation of neuromuscular junction stability GO:1904398 positive regulation of neuromuscular junction development GO:1904398 Any process that activates or increases the frequency, rate or extent of neuromuscular junction development. GOC:TermGenie GO_REF:0000058 PMID:7722643 positive regulation of neuromuscular junction organization GOC:TermGenie up regulation of neuromuscular junction development GOC:TermGenie up regulation of neuromuscular junction organization GOC:TermGenie up-regulation of neuromuscular junction development GOC:TermGenie up-regulation of neuromuscular junction organization GOC:TermGenie upregulation of neuromuscular junction development GOC:TermGenie upregulation of neuromuscular junction organization GOC:TermGenie activation of neuromuscular junction development GOC:TermGenie activation of neuromuscular junction organization GOC:TermGenie activation of NMJ stability GOC:TermGenie activation of neuromuscular junction stability GOC:TermGenie positive regulation of NMJ stability GOC:TermGenie positive regulation of neuromuscular junction stability GOC:TermGenie up regulation of NMJ stability GOC:TermGenie up regulation of neuromuscular junction stability GOC:TermGenie up-regulation of NMJ stability GOC:TermGenie up-regulation of neuromuscular junction stability GOC:TermGenie upregulation of NMJ stability GOC:TermGenie upregulation of neuromuscular junction stability GOC:TermGenie Any process that modulates the frequency, rate or extent of secretory granule organization. sl 2015-06-25T19:40:42Z regulation of secretory granule organisation biological_process regulation of secretory granule organization and biogenesis GO:1904409 regulation of secretory granule organization GO:1904409 Any process that modulates the frequency, rate or extent of secretory granule organization. GOC:TermGenie GO_REF:0000058 PMID:15039777 regulation of secretory granule organisation GOC:TermGenie regulation of secretory granule organization and biogenesis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of secretory granule organization. sl 2015-06-25T19:40:49Z down regulation of secretory granule organisation down regulation of secretory granule organization down-regulation of secretory granule organisation down-regulation of secretory granule organization downregulation of secretory granule organisation downregulation of secretory granule organization negative regulation of secretory granule organisation inhibition of secretory granule organisation inhibition of secretory granule organization biological_process down regulation of secretory granule organization and biogenesis down-regulation of secretory granule organization and biogenesis downregulation of secretory granule organization and biogenesis inhibition of secretory granule organization and biogenesis negative regulation of secretory granule organization and biogenesis GO:1904410 negative regulation of secretory granule organization GO:1904410 Any process that stops, prevents or reduces the frequency, rate or extent of secretory granule organization. GOC:TermGenie GO_REF:0000058 PMID:15039777 down regulation of secretory granule organisation GOC:TermGenie down regulation of secretory granule organization GOC:TermGenie down-regulation of secretory granule organisation GOC:TermGenie down-regulation of secretory granule organization GOC:TermGenie downregulation of secretory granule organisation GOC:TermGenie downregulation of secretory granule organization GOC:TermGenie negative regulation of secretory granule organisation GOC:TermGenie inhibition of secretory granule organisation GOC:TermGenie inhibition of secretory granule organization GOC:TermGenie down regulation of secretory granule organization and biogenesis GOC:TermGenie down-regulation of secretory granule organization and biogenesis GOC:TermGenie downregulation of secretory granule organization and biogenesis GOC:TermGenie inhibition of secretory granule organization and biogenesis GOC:TermGenie negative regulation of secretory granule organization and biogenesis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of secretory granule organization. sl 2015-06-25T19:40:55Z positive regulation of secretory granule organisation up regulation of secretory granule organisation up regulation of secretory granule organization up-regulation of secretory granule organisation up-regulation of secretory granule organization upregulation of secretory granule organisation upregulation of secretory granule organization activation of secretory granule organisation activation of secretory granule organization biological_process activation of secretory granule organization and biogenesis positive regulation of secretory granule organization and biogenesis up regulation of secretory granule organization and biogenesis up-regulation of secretory granule organization and biogenesis upregulation of secretory granule organization and biogenesis GO:1904411 positive regulation of secretory granule organization GO:1904411 Any process that activates or increases the frequency, rate or extent of secretory granule organization. GOC:TermGenie GO_REF:0000058 PMID:15039777 positive regulation of secretory granule organisation GOC:TermGenie up regulation of secretory granule organisation GOC:TermGenie up regulation of secretory granule organization GOC:TermGenie up-regulation of secretory granule organisation GOC:TermGenie up-regulation of secretory granule organization GOC:TermGenie upregulation of secretory granule organisation GOC:TermGenie upregulation of secretory granule organization GOC:TermGenie activation of secretory granule organisation GOC:TermGenie activation of secretory granule organization GOC:TermGenie activation of secretory granule organization and biogenesis GOC:TermGenie positive regulation of secretory granule organization and biogenesis GOC:TermGenie up regulation of secretory granule organization and biogenesis GOC:TermGenie up-regulation of secretory granule organization and biogenesis GOC:TermGenie upregulation of secretory granule organization and biogenesis GOC:TermGenie Any process that modulates the frequency, rate or extent of cardiac ventricle development. sl 2015-06-25T19:52:15Z biological_process GO:1904412 regulation of cardiac ventricle development GO:1904412 Any process that modulates the frequency, rate or extent of cardiac ventricle development. GOC:TermGenie GO_REF:0000058 PMID:19590510 Any process that stops, prevents or reduces the frequency, rate or extent of cardiac ventricle development. sl 2015-06-25T19:52:21Z down regulation of cardiac ventricle development down-regulation of cardiac ventricle development downregulation of cardiac ventricle development inhibition of cardiac ventricle development biological_process GO:1904413 negative regulation of cardiac ventricle development GO:1904413 Any process that stops, prevents or reduces the frequency, rate or extent of cardiac ventricle development. GOC:TermGenie GO_REF:0000058 PMID:19590510 down regulation of cardiac ventricle development GOC:TermGenie down-regulation of cardiac ventricle development GOC:TermGenie downregulation of cardiac ventricle development GOC:TermGenie inhibition of cardiac ventricle development GOC:TermGenie Any process that activates or increases the frequency, rate or extent of cardiac ventricle development. sl 2015-06-25T19:52:27Z up regulation of cardiac ventricle development up-regulation of cardiac ventricle development upregulation of cardiac ventricle development activation of cardiac ventricle development biological_process GO:1904414 positive regulation of cardiac ventricle development GO:1904414 Any process that activates or increases the frequency, rate or extent of cardiac ventricle development. GOC:TermGenie GO_REF:0000058 PMID:19590510 up regulation of cardiac ventricle development GOC:TermGenie up-regulation of cardiac ventricle development GOC:TermGenie upregulation of cardiac ventricle development GOC:TermGenie activation of cardiac ventricle development GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of neuronal action potential. sl 2015-07-09T18:02:40Z down regulation of neuronal action potential down-regulation of neuronal action potential downregulation of neuronal action potential inhibition of neuronal action potential biological_process down regulation of generation of action potential down-regulation of generation of action potential downregulation of generation of action potential inhibition of generation of action potential negative regulation of generation of action potential GO:1904456 negative regulation of neuronal action potential GO:1904456 Any process that stops, prevents or reduces the frequency, rate or extent of neuronal action potential. GOC:TermGenie GO_REF:0000058 PMID:25126967 down regulation of neuronal action potential GOC:TermGenie down-regulation of neuronal action potential GOC:TermGenie downregulation of neuronal action potential GOC:TermGenie inhibition of neuronal action potential GOC:TermGenie down regulation of generation of action potential GOC:TermGenie down-regulation of generation of action potential GOC:TermGenie downregulation of generation of action potential GOC:TermGenie inhibition of generation of action potential GOC:TermGenie negative regulation of generation of action potential GOC:TermGenie Any process that activates or increases the frequency, rate or extent of neuronal action potential. sl 2015-07-09T18:02:46Z up regulation of neuronal action potential up-regulation of neuronal action potential upregulation of neuronal action potential activation of neuronal action potential biological_process activation of generation of action potential positive regulation of generation of action potential up regulation of generation of action potential up-regulation of generation of action potential upregulation of generation of action potential GO:1904457 positive regulation of neuronal action potential GO:1904457 Any process that activates or increases the frequency, rate or extent of neuronal action potential. GOC:TermGenie GO_REF:0000058 PMID:25126967 up regulation of neuronal action potential GOC:TermGenie up-regulation of neuronal action potential GOC:TermGenie upregulation of neuronal action potential GOC:TermGenie activation of neuronal action potential GOC:TermGenie activation of generation of action potential GOC:TermGenie positive regulation of generation of action potential GOC:TermGenie up regulation of generation of action potential GOC:TermGenie up-regulation of generation of action potential GOC:TermGenie upregulation of generation of action potential GOC:TermGenie A process in which a protein is transported to, or maintained in, a location within a ciliary transition zone. kmv 2015-07-17T20:43:21Z protein localisation in ciliary transition zone protein localisation to ciliary transition zone protein localization in ciliary transition zone biological_process GO:1904491 protein localization to ciliary transition zone GO:1904491 A process in which a protein is transported to, or maintained in, a location within a ciliary transition zone. GOC:TermGenie GOC:kmv GO_REF:0000087 PMID:21422230 protein localisation in ciliary transition zone GOC:TermGenie protein localisation to ciliary transition zone GOC:TermGenie protein localization in ciliary transition zone GOC:TermGenie Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glycoprotein stimulus. sl 2015-08-20T16:46:24Z response to glycoproteins biological_process GO:1904587 response to glycoprotein GO:1904587 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glycoprotein stimulus. GOC:TermGenie GO_REF:0000071 PMID:14597422 Any apoptotic process in a fat cell. sl 2015-08-27T18:13:06Z adipocyte apoptotic process adipose cell apoptotic process adipocyte apoptosis adipose cell apoptosis fat cell apoptosis biological_process GO:1904606 fat cell apoptotic process GO:1904606 Any apoptotic process in a fat cell. GOC:TermGenie GO_REF:0000085 PMID:17024416 adipocyte apoptotic process GOC:TermGenie adipose cell apoptotic process GOC:TermGenie adipocyte apoptosis GOC:TermGenie adipose cell apoptosis GOC:TermGenie fat cell apoptosis GOC:TermGenie Any process that modulates the frequency, rate or extent of fat cell apoptotic process. sl 2015-08-31T20:59:28Z regulation of adipocyte apoptotic process regulation of adipose cell apoptotic process regulation of adipocyte apoptosis regulation of adipose cell apoptosis regulation of fat cell apoptosis biological_process GO:1904649 regulation of fat cell apoptotic process GO:1904649 Any process that modulates the frequency, rate or extent of fat cell apoptotic process. GOC:TermGenie GO_REF:0000058 PMID:17024416 regulation of adipocyte apoptotic process GOC:TermGenie regulation of adipose cell apoptotic process GOC:TermGenie regulation of adipocyte apoptosis GOC:TermGenie regulation of adipose cell apoptosis GOC:TermGenie regulation of fat cell apoptosis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of fat cell apoptotic process. sl 2015-08-31T20:59:34Z down regulation of adipocyte apoptotic process down regulation of adipose cell apoptotic process down regulation of fat cell apoptotic process down-regulation of adipocyte apoptotic process down-regulation of adipose cell apoptotic process down-regulation of fat cell apoptotic process downregulation of adipocyte apoptotic process downregulation of adipose cell apoptotic process downregulation of fat cell apoptotic process negative regulation of adipocyte apoptotic process negative regulation of adipose cell apoptotic process down regulation of adipocyte apoptosis down regulation of adipose cell apoptosis down regulation of fat cell apoptosis down-regulation of adipocyte apoptosis down-regulation of adipose cell apoptosis down-regulation of fat cell apoptosis downregulation of adipocyte apoptosis downregulation of adipose cell apoptosis downregulation of fat cell apoptosis inhibition of adipocyte apoptosis inhibition of adipocyte apoptotic process inhibition of adipose cell apoptosis inhibition of adipose cell apoptotic process inhibition of fat cell apoptosis inhibition of fat cell apoptotic process negative regulation of adipocyte apoptosis negative regulation of adipose cell apoptosis negative regulation of fat cell apoptosis biological_process GO:1904650 negative regulation of fat cell apoptotic process GO:1904650 Any process that stops, prevents or reduces the frequency, rate or extent of fat cell apoptotic process. GOC:TermGenie GO_REF:0000058 PMID:17024416 down regulation of adipocyte apoptotic process GOC:TermGenie down regulation of adipose cell apoptotic process GOC:TermGenie down regulation of fat cell apoptotic process GOC:TermGenie down-regulation of adipocyte apoptotic process GOC:TermGenie down-regulation of adipose cell apoptotic process GOC:TermGenie down-regulation of fat cell apoptotic process GOC:TermGenie downregulation of adipocyte apoptotic process GOC:TermGenie downregulation of adipose cell apoptotic process GOC:TermGenie downregulation of fat cell apoptotic process GOC:TermGenie negative regulation of adipocyte apoptotic process GOC:TermGenie negative regulation of adipose cell apoptotic process GOC:TermGenie down regulation of adipocyte apoptosis GOC:TermGenie down regulation of adipose cell apoptosis GOC:TermGenie down regulation of fat cell apoptosis GOC:TermGenie down-regulation of adipocyte apoptosis GOC:TermGenie down-regulation of adipose cell apoptosis GOC:TermGenie down-regulation of fat cell apoptosis GOC:TermGenie downregulation of adipocyte apoptosis GOC:TermGenie downregulation of adipose cell apoptosis GOC:TermGenie downregulation of fat cell apoptosis GOC:TermGenie inhibition of adipocyte apoptosis GOC:TermGenie inhibition of adipocyte apoptotic process GOC:TermGenie inhibition of adipose cell apoptosis GOC:TermGenie inhibition of adipose cell apoptotic process GOC:TermGenie inhibition of fat cell apoptosis GOC:TermGenie inhibition of fat cell apoptotic process GOC:TermGenie negative regulation of adipocyte apoptosis GOC:TermGenie negative regulation of adipose cell apoptosis GOC:TermGenie negative regulation of fat cell apoptosis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of fat cell apoptotic process. sl 2015-08-31T20:59:40Z positive regulation of adipocyte apoptotic process positive regulation of adipose cell apoptotic process up regulation of adipocyte apoptotic process up regulation of adipose cell apoptotic process up regulation of fat cell apoptotic process up-regulation of adipocyte apoptotic process up-regulation of adipose cell apoptotic process up-regulation of fat cell apoptotic process upregulation of adipocyte apoptotic process upregulation of adipose cell apoptotic process upregulation of fat cell apoptotic process activation of adipocyte apoptosis activation of adipocyte apoptotic process activation of adipose cell apoptosis activation of adipose cell apoptotic process activation of fat cell apoptosis activation of fat cell apoptotic process positive regulation of adipocyte apoptosis positive regulation of adipose cell apoptosis positive regulation of fat cell apoptosis up regulation of adipocyte apoptosis up regulation of adipose cell apoptosis up regulation of fat cell apoptosis up-regulation of adipocyte apoptosis up-regulation of adipose cell apoptosis up-regulation of fat cell apoptosis upregulation of adipocyte apoptosis upregulation of adipose cell apoptosis upregulation of fat cell apoptosis biological_process GO:1904651 positive regulation of fat cell apoptotic process GO:1904651 Any process that activates or increases the frequency, rate or extent of fat cell apoptotic process. GOC:TermGenie GO_REF:0000058 PMID:17024416 positive regulation of adipocyte apoptotic process GOC:TermGenie positive regulation of adipose cell apoptotic process GOC:TermGenie up regulation of adipocyte apoptotic process GOC:TermGenie up regulation of adipose cell apoptotic process GOC:TermGenie up regulation of fat cell apoptotic process GOC:TermGenie up-regulation of adipocyte apoptotic process GOC:TermGenie up-regulation of adipose cell apoptotic process GOC:TermGenie up-regulation of fat cell apoptotic process GOC:TermGenie upregulation of adipocyte apoptotic process GOC:TermGenie upregulation of adipose cell apoptotic process GOC:TermGenie upregulation of fat cell apoptotic process GOC:TermGenie activation of adipocyte apoptosis GOC:TermGenie activation of adipocyte apoptotic process GOC:TermGenie activation of adipose cell apoptosis GOC:TermGenie activation of adipose cell apoptotic process GOC:TermGenie activation of fat cell apoptosis GOC:TermGenie activation of fat cell apoptotic process GOC:TermGenie positive regulation of adipocyte apoptosis GOC:TermGenie positive regulation of adipose cell apoptosis GOC:TermGenie positive regulation of fat cell apoptosis GOC:TermGenie up regulation of adipocyte apoptosis GOC:TermGenie up regulation of adipose cell apoptosis GOC:TermGenie up regulation of fat cell apoptosis GOC:TermGenie up-regulation of adipocyte apoptosis GOC:TermGenie up-regulation of adipose cell apoptosis GOC:TermGenie up-regulation of fat cell apoptosis GOC:TermGenie upregulation of adipocyte apoptosis GOC:TermGenie upregulation of adipose cell apoptosis GOC:TermGenie upregulation of fat cell apoptosis GOC:TermGenie Any process that modulates the frequency, rate or extent of somatic stem cell division. rph 2015-09-14T08:47:22Z regulation of somatic stem cell renewal biological_process GO:1904675 regulation of somatic stem cell division GO:1904675 Any process that modulates the frequency, rate or extent of somatic stem cell division. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:19409607 regulation of somatic stem cell renewal GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of somatic stem cell division. rph 2015-09-14T08:47:28Z down regulation of somatic stem cell division down regulation of somatic stem cell renewal down-regulation of somatic stem cell division down-regulation of somatic stem cell renewal downregulation of somatic stem cell division downregulation of somatic stem cell renewal negative regulation of somatic stem cell renewal inhibition of somatic stem cell division inhibition of somatic stem cell renewal biological_process GO:1904676 negative regulation of somatic stem cell division GO:1904676 Any process that stops, prevents or reduces the frequency, rate or extent of somatic stem cell division. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:19409607 down regulation of somatic stem cell division GOC:TermGenie down regulation of somatic stem cell renewal GOC:TermGenie down-regulation of somatic stem cell division GOC:TermGenie down-regulation of somatic stem cell renewal GOC:TermGenie downregulation of somatic stem cell division GOC:TermGenie downregulation of somatic stem cell renewal GOC:TermGenie negative regulation of somatic stem cell renewal GOC:TermGenie inhibition of somatic stem cell division GOC:TermGenie inhibition of somatic stem cell renewal GOC:TermGenie Any process that activates or increases the frequency, rate or extent of somatic stem cell division. rph 2015-09-14T08:47:34Z positive regulation of somatic stem cell renewal up regulation of somatic stem cell division up regulation of somatic stem cell renewal up-regulation of somatic stem cell division up-regulation of somatic stem cell renewal upregulation of somatic stem cell division upregulation of somatic stem cell renewal activation of somatic stem cell division activation of somatic stem cell renewal biological_process GO:1904677 positive regulation of somatic stem cell division GO:1904677 Any process that activates or increases the frequency, rate or extent of somatic stem cell division. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:19409607 positive regulation of somatic stem cell renewal GOC:TermGenie up regulation of somatic stem cell division GOC:TermGenie up regulation of somatic stem cell renewal GOC:TermGenie up-regulation of somatic stem cell division GOC:TermGenie up-regulation of somatic stem cell renewal GOC:TermGenie upregulation of somatic stem cell division GOC:TermGenie upregulation of somatic stem cell renewal GOC:TermGenie activation of somatic stem cell division GOC:TermGenie activation of somatic stem cell renewal GOC:TermGenie Any process that modulates the frequency, rate or extent of cytoplasmic translational initiation. dos 2015-09-25T14:39:38Z biological_process GO:1904688 regulation of cytoplasmic translational initiation GO:1904688 Any process that modulates the frequency, rate or extent of cytoplasmic translational initiation. GOC:TermGenie GO_REF:0000058 PMID:12242291 Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translational initiation. dos 2015-09-25T14:39:44Z down regulation of cytoplasmic translational initiation down-regulation of cytoplasmic translational initiation downregulation of cytoplasmic translational initiation inhibition of cytoplasmic translational initiation biological_process GO:1904689 negative regulation of cytoplasmic translational initiation GO:1904689 Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translational initiation. GOC:TermGenie GO_REF:0000058 PMID:12242291 down regulation of cytoplasmic translational initiation GOC:TermGenie down-regulation of cytoplasmic translational initiation GOC:TermGenie downregulation of cytoplasmic translational initiation GOC:TermGenie inhibition of cytoplasmic translational initiation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of cytoplasmic translational initiation. dos 2015-09-25T14:39:50Z up regulation of cytoplasmic translational initiation up-regulation of cytoplasmic translational initiation upregulation of cytoplasmic translational initiation activation of cytoplasmic translational initiation biological_process GO:1904690 positive regulation of cytoplasmic translational initiation GO:1904690 Any process that activates or increases the frequency, rate or extent of cytoplasmic translational initiation. GOC:TermGenie GO_REF:0000058 PMID:12242291 up regulation of cytoplasmic translational initiation GOC:TermGenie up-regulation of cytoplasmic translational initiation GOC:TermGenie upregulation of cytoplasmic translational initiation GOC:TermGenie activation of cytoplasmic translational initiation GOC:TermGenie The developmental process by which a midbrain is generated and organized. bf 2015-09-29T09:15:28Z MB morphogenesis biological_process mesencephalon morphogenesis GO:1904693 midbrain morphogenesis GO:1904693 The developmental process by which a midbrain is generated and organized. GOC:PARL GOC:TermGenie GOC:bf GO_REF:0000083 PMID:21347250 MB morphogenesis GOC:TermGenie mesencephalon morphogenesis GOC:TermGenie Any process that modulates the frequency, rate or extent of acinar cell proliferation. sl 2015-09-30T15:19:50Z regulation of acinic cell proliferation regulation of acinous cell proliferation biological_process GO:1904697 regulation of acinar cell proliferation GO:1904697 Any process that modulates the frequency, rate or extent of acinar cell proliferation. GOC:TermGenie GO_REF:0000058 PMID:9788538 regulation of acinic cell proliferation GOC:TermGenie regulation of acinous cell proliferation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of acinar cell proliferation. sl 2015-09-30T15:19:57Z down regulation of acinar cell proliferation down regulation of acinic cell proliferation down regulation of acinous cell proliferation down-regulation of acinar cell proliferation down-regulation of acinic cell proliferation down-regulation of acinous cell proliferation downregulation of acinar cell proliferation downregulation of acinic cell proliferation downregulation of acinous cell proliferation negative regulation of acinic cell proliferation negative regulation of acinous cell proliferation inhibition of acinar cell proliferation inhibition of acinic cell proliferation inhibition of acinous cell proliferation biological_process GO:1904698 negative regulation of acinar cell proliferation GO:1904698 Any process that stops, prevents or reduces the frequency, rate or extent of acinar cell proliferation. GOC:TermGenie GO_REF:0000058 PMID:9788538 down regulation of acinar cell proliferation GOC:TermGenie down regulation of acinic cell proliferation GOC:TermGenie down regulation of acinous cell proliferation GOC:TermGenie down-regulation of acinar cell proliferation GOC:TermGenie down-regulation of acinic cell proliferation GOC:TermGenie down-regulation of acinous cell proliferation GOC:TermGenie downregulation of acinar cell proliferation GOC:TermGenie downregulation of acinic cell proliferation GOC:TermGenie downregulation of acinous cell proliferation GOC:TermGenie negative regulation of acinic cell proliferation GOC:TermGenie negative regulation of acinous cell proliferation GOC:TermGenie inhibition of acinar cell proliferation GOC:TermGenie inhibition of acinic cell proliferation GOC:TermGenie inhibition of acinous cell proliferation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of acinar cell proliferation. sl 2015-09-30T15:20:03Z positive regulation of acinic cell proliferation positive regulation of acinous cell proliferation up regulation of acinar cell proliferation up regulation of acinic cell proliferation up regulation of acinous cell proliferation up-regulation of acinar cell proliferation up-regulation of acinic cell proliferation up-regulation of acinous cell proliferation upregulation of acinar cell proliferation upregulation of acinic cell proliferation upregulation of acinous cell proliferation activation of acinar cell proliferation activation of acinic cell proliferation activation of acinous cell proliferation biological_process GO:1904699 positive regulation of acinar cell proliferation GO:1904699 Any process that activates or increases the frequency, rate or extent of acinar cell proliferation. GOC:TermGenie GO_REF:0000058 PMID:9788538 positive regulation of acinic cell proliferation GOC:TermGenie positive regulation of acinous cell proliferation GOC:TermGenie up regulation of acinar cell proliferation GOC:TermGenie up regulation of acinic cell proliferation GOC:TermGenie up regulation of acinous cell proliferation GOC:TermGenie up-regulation of acinar cell proliferation GOC:TermGenie up-regulation of acinic cell proliferation GOC:TermGenie up-regulation of acinous cell proliferation GOC:TermGenie upregulation of acinar cell proliferation GOC:TermGenie upregulation of acinic cell proliferation GOC:TermGenie upregulation of acinous cell proliferation GOC:TermGenie activation of acinar cell proliferation GOC:TermGenie activation of acinic cell proliferation GOC:TermGenie activation of acinous cell proliferation GOC:TermGenie Any process that modulates the frequency, rate or extent of vascular smooth muscle cell proliferation. sl 2015-10-01T16:05:20Z regulation of VSMC proliferation regulation of vascular smooth muscle cell proliferation biological_process GO:1904705 regulation of vascular associated smooth muscle cell proliferation GO:1904705 Any process that modulates the frequency, rate or extent of vascular smooth muscle cell proliferation. GOC:TermGenie GO_REF:0000058 PMID:23246467 regulation of VSMC proliferation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell proliferation. sl 2015-10-01T16:05:26Z down regulation of VSMC proliferation down regulation of vascular smooth muscle cell proliferation down-regulation of VSMC proliferation down-regulation of vascular smooth muscle cell proliferation downregulation of VSMC proliferation downregulation of vascular smooth muscle cell proliferation negative regulation of VSMC proliferation negative regulation of vascular smooth muscle cell proliferation inhibition of VSMC proliferation inhibition of vascular smooth muscle cell proliferation biological_process GO:1904706 negative regulation of vascular associated smooth muscle cell proliferation GO:1904706 Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell proliferation. GOC:TermGenie GO_REF:0000058 PMID:23246467 down regulation of VSMC proliferation GOC:TermGenie down regulation of vascular smooth muscle cell proliferation GOC:TermGenie down-regulation of VSMC proliferation GOC:TermGenie down-regulation of vascular smooth muscle cell proliferation GOC:TermGenie downregulation of VSMC proliferation GOC:TermGenie downregulation of vascular smooth muscle cell proliferation GOC:TermGenie negative regulation of VSMC proliferation GOC:TermGenie inhibition of VSMC proliferation GOC:TermGenie inhibition of vascular smooth muscle cell proliferation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell proliferation. sl 2015-10-01T16:05:32Z positive regulation of VSMC proliferation positive regulation of vascular smooth muscle cell proliferation up regulation of VSMC proliferation up regulation of vascular smooth muscle cell proliferation up-regulation of VSMC proliferation up-regulation of vascular smooth muscle cell proliferation upregulation of VSMC proliferation upregulation of vascular smooth muscle cell proliferation activation of VSMC proliferation activation of vascular smooth muscle cell proliferation biological_process GO:1904707 positive regulation of vascular associated smooth muscle cell proliferation GO:1904707 Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell proliferation. GOC:TermGenie GO_REF:0000058 PMID:23246467 positive regulation of VSMC proliferation GOC:TermGenie up regulation of VSMC proliferation GOC:TermGenie up regulation of vascular smooth muscle cell proliferation GOC:TermGenie up-regulation of VSMC proliferation GOC:TermGenie up-regulation of vascular smooth muscle cell proliferation GOC:TermGenie upregulation of VSMC proliferation GOC:TermGenie upregulation of vascular smooth muscle cell proliferation GOC:TermGenie activation of VSMC proliferation GOC:TermGenie activation of vascular smooth muscle cell proliferation GOC:TermGenie The orderly movement of a vascular associated smooth muscle cell from one site to another. rph 2015-10-15T09:56:00Z vascular smooth muscle cell migration biological_process GO:1904738 vascular associated smooth muscle cell migration GO:1904738 The orderly movement of a vascular associated smooth muscle cell from one site to another. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000091 PMID:20693317 Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in development. es 2015-10-19T14:12:27Z down regulation of apoptotic cell death involved in anatomical structure development down regulation of apoptotic cell death involved in development of an anatomical structure down regulation of apoptotic process involved in anatomical structure development down regulation of apoptotic process involved in development down regulation of apoptotic process involved in development of an anatomical structure down regulation of apoptotic programmed cell death involved in anatomical structure development down regulation of apoptotic programmed cell death involved in development of an anatomical structure down regulation of programmed cell death by apoptosis involved in anatomical structure development down regulation of programmed cell death by apoptosis involved in development of an anatomical structure down-regulation of apoptotic cell death involved in anatomical structure development down-regulation of apoptotic cell death involved in development of an anatomical structure down-regulation of apoptotic process involved in anatomical structure development down-regulation of apoptotic process involved in development down-regulation of apoptotic process involved in development of an anatomical structure down-regulation of apoptotic programmed cell death involved in anatomical structure development down-regulation of apoptotic programmed cell death involved in development of an anatomical structure down-regulation of programmed cell death by apoptosis involved in anatomical structure development down-regulation of programmed cell death by apoptosis involved in development of an anatomical structure downregulation of apoptotic cell death involved in anatomical structure development downregulation of apoptotic cell death involved in development of an anatomical structure downregulation of apoptotic process involved in anatomical structure development downregulation of apoptotic process involved in development downregulation of apoptotic process involved in development of an anatomical structure downregulation of apoptotic programmed cell death involved in anatomical structure development downregulation of apoptotic programmed cell death involved in development of an anatomical structure downregulation of programmed cell death by apoptosis involved in anatomical structure development downregulation of programmed cell death by apoptosis involved in development of an anatomical structure negative regulation of apoptotic cell death involved in anatomical structure development negative regulation of apoptotic cell death involved in development of an anatomical structure negative regulation of apoptotic process involved in anatomical structure development negative regulation of apoptotic process involved in development of an anatomical structure negative regulation of apoptotic programmed cell death involved in anatomical structure development negative regulation of apoptotic programmed cell death involved in development of an anatomical structure negative regulation of programmed cell death by apoptosis involved in anatomical structure development negative regulation of programmed cell death by apoptosis involved in development of an anatomical structure down regulation of activation of apoptosis involved in anatomical structure development down regulation of activation of apoptosis involved in development of an anatomical structure down regulation of apoptosis involved in anatomical structure development down regulation of apoptosis involved in development of an anatomical structure down regulation of apoptosis signaling involved in anatomical structure development down regulation of apoptosis signaling involved in development of an anatomical structure down regulation of apoptotic program involved in anatomical structure development down regulation of apoptotic program involved in development of an anatomical structure down regulation of type I programmed cell death involved in anatomical structure development down regulation of type I programmed cell death involved in development of an anatomical structure down-regulation of activation of apoptosis involved in anatomical structure development down-regulation of activation of apoptosis involved in development of an anatomical structure down-regulation of apoptosis involved in anatomical structure development down-regulation of apoptosis involved in development of an anatomical structure down-regulation of apoptosis signaling involved in anatomical structure development down-regulation of apoptosis signaling involved in development of an anatomical structure down-regulation of apoptotic program involved in anatomical structure development down-regulation of apoptotic program involved in development of an anatomical structure down-regulation of type I programmed cell death involved in anatomical structure development down-regulation of type I programmed cell death involved in development of an anatomical structure downregulation of activation of apoptosis involved in anatomical structure development downregulation of activation of apoptosis involved in development of an anatomical structure downregulation of apoptosis involved in anatomical structure development downregulation of apoptosis involved in development of an anatomical structure downregulation of apoptosis signaling involved in anatomical structure development downregulation of apoptosis signaling involved in development of an anatomical structure downregulation of apoptotic program involved in anatomical structure development downregulation of apoptotic program involved in development of an anatomical structure downregulation of type I programmed cell death involved in anatomical structure development downregulation of type I programmed cell death involved in development of an anatomical structure inhibition of activation of apoptosis involved in anatomical structure development inhibition of activation of apoptosis involved in development of an anatomical structure inhibition of apoptosis involved in anatomical structure development inhibition of apoptosis involved in development of an anatomical structure inhibition of apoptosis signaling involved in anatomical structure development inhibition of apoptosis signaling involved in development of an anatomical structure inhibition of apoptotic cell death involved in anatomical structure development inhibition of apoptotic cell death involved in development of an anatomical structure inhibition of apoptotic process involved in anatomical structure development inhibition of apoptotic process involved in development inhibition of apoptotic process involved in development of an anatomical structure inhibition of apoptotic program involved in anatomical structure development inhibition of apoptotic program involved in development of an anatomical structure inhibition of apoptotic programmed cell death involved in anatomical structure development inhibition of apoptotic programmed cell death involved in development of an anatomical structure inhibition of programmed cell death by apoptosis involved in anatomical structure development inhibition of programmed cell death by apoptosis involved in development of an anatomical structure inhibition of type I programmed cell death involved in anatomical structure development inhibition of type I programmed cell death involved in development of an anatomical structure negative regulation of activation of apoptosis involved in anatomical structure development negative regulation of activation of apoptosis involved in development of an anatomical structure negative regulation of apoptosis involved in anatomical structure development negative regulation of apoptosis involved in development of an anatomical structure negative regulation of apoptosis signaling involved in anatomical structure development negative regulation of apoptosis signaling involved in development of an anatomical structure negative regulation of apoptotic program involved in anatomical structure development negative regulation of apoptotic program involved in development of an anatomical structure negative regulation of type I programmed cell death involved in anatomical structure development negative regulation of type I programmed cell death involved in development of an anatomical structure biological_process down regulation of apoptosis activator activity involved in anatomical structure development down regulation of apoptosis activator activity involved in development of an anatomical structure down regulation of commitment to apoptosis involved in anatomical structure development down regulation of commitment to apoptosis involved in development of an anatomical structure down regulation of induction of apoptosis by p53 involved in anatomical structure development down regulation of induction of apoptosis by p53 involved in development of an anatomical structure down regulation of induction of apoptosis involved in anatomical structure development down regulation of induction of apoptosis involved in development of an anatomical structure down regulation of signaling (initiator) caspase activity involved in anatomical structure development down regulation of signaling (initiator) caspase activity involved in development of an anatomical structure down-regulation of apoptosis activator activity involved in anatomical structure development down-regulation of apoptosis activator activity involved in development of an anatomical structure down-regulation of commitment to apoptosis involved in anatomical structure development down-regulation of commitment to apoptosis involved in development of an anatomical structure down-regulation of induction of apoptosis by p53 involved in anatomical structure development down-regulation of induction of apoptosis by p53 involved in development of an anatomical structure down-regulation of induction of apoptosis involved in anatomical structure development down-regulation of induction of apoptosis involved in development of an anatomical structure down-regulation of signaling (initiator) caspase activity involved in anatomical structure development down-regulation of signaling (initiator) caspase activity involved in development of an anatomical structure downregulation of apoptosis activator activity involved in anatomical structure development downregulation of apoptosis activator activity involved in development of an anatomical structure downregulation of commitment to apoptosis involved in anatomical structure development downregulation of commitment to apoptosis involved in development of an anatomical structure downregulation of induction of apoptosis by p53 involved in anatomical structure development downregulation of induction of apoptosis by p53 involved in development of an anatomical structure downregulation of induction of apoptosis involved in anatomical structure development downregulation of induction of apoptosis involved in development of an anatomical structure downregulation of signaling (initiator) caspase activity involved in anatomical structure development downregulation of signaling (initiator) caspase activity involved in development of an anatomical structure inhibition of apoptosis activator activity involved in anatomical structure development inhibition of apoptosis activator activity involved in development of an anatomical structure inhibition of commitment to apoptosis involved in anatomical structure development inhibition of commitment to apoptosis involved in development of an anatomical structure inhibition of induction of apoptosis by p53 involved in anatomical structure development inhibition of induction of apoptosis by p53 involved in development of an anatomical structure inhibition of induction of apoptosis involved in anatomical structure development inhibition of induction of apoptosis involved in development of an anatomical structure inhibition of signaling (initiator) caspase activity involved in anatomical structure development inhibition of signaling (initiator) caspase activity involved in development of an anatomical structure negative regulation of apoptosis activator activity involved in anatomical structure development negative regulation of apoptosis activator activity involved in development of an anatomical structure negative regulation of commitment to apoptosis involved in anatomical structure development negative regulation of commitment to apoptosis involved in development of an anatomical structure negative regulation of induction of apoptosis by p53 involved in anatomical structure development negative regulation of induction of apoptosis by p53 involved in development of an anatomical structure negative regulation of induction of apoptosis involved in anatomical structure development negative regulation of induction of apoptosis involved in development of an anatomical structure negative regulation of signaling (initiator) caspase activity involved in anatomical structure development negative regulation of signaling (initiator) caspase activity involved in development of an anatomical structure GO:1904746 U4PR86 in PMID:22801495 inferred from mutant phenotype negative regulation of apoptotic process involved in development GO:1904746 Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in development. GOC:TermGenie GO_REF:0000058 PMID:22801495 down regulation of apoptotic cell death involved in anatomical structure development GOC:TermGenie down regulation of apoptotic cell death involved in development of an anatomical structure GOC:TermGenie down regulation of apoptotic process involved in anatomical structure development GOC:TermGenie down regulation of apoptotic process involved in development GOC:TermGenie down regulation of apoptotic process involved in development of an anatomical structure GOC:TermGenie down regulation of apoptotic programmed cell death involved in anatomical structure development GOC:TermGenie down regulation of apoptotic programmed cell death involved in development of an anatomical structure GOC:TermGenie down regulation of programmed cell death by apoptosis involved in anatomical structure development GOC:TermGenie down regulation of programmed cell death by apoptosis involved in development of an anatomical structure GOC:TermGenie down-regulation of apoptotic cell death involved in anatomical structure development GOC:TermGenie down-regulation of apoptotic cell death involved in development of an anatomical structure GOC:TermGenie down-regulation of apoptotic process involved in anatomical structure development GOC:TermGenie down-regulation of apoptotic process involved in development GOC:TermGenie down-regulation of apoptotic process involved in development of an anatomical structure GOC:TermGenie down-regulation of apoptotic programmed cell death involved in anatomical structure development GOC:TermGenie down-regulation of apoptotic programmed cell death involved in development of an anatomical structure GOC:TermGenie down-regulation of programmed cell death by apoptosis involved in anatomical structure development GOC:TermGenie down-regulation of programmed cell death by apoptosis involved in development of an anatomical structure GOC:TermGenie downregulation of apoptotic cell death involved in anatomical structure development GOC:TermGenie downregulation of apoptotic cell death involved in development of an anatomical structure GOC:TermGenie downregulation of apoptotic process involved in anatomical structure development GOC:TermGenie downregulation of apoptotic process involved in development GOC:TermGenie downregulation of apoptotic process involved in development of an anatomical structure GOC:TermGenie downregulation of apoptotic programmed cell death involved in anatomical structure development GOC:TermGenie downregulation of apoptotic programmed cell death involved in development of an anatomical structure GOC:TermGenie downregulation of programmed cell death by apoptosis involved in anatomical structure development GOC:TermGenie downregulation of programmed cell death by apoptosis involved in development of an anatomical structure GOC:TermGenie negative regulation of apoptotic cell death involved in anatomical structure development GOC:TermGenie negative regulation of apoptotic cell death involved in development of an anatomical structure GOC:TermGenie negative regulation of apoptotic process involved in anatomical structure development GOC:TermGenie negative regulation of apoptotic process involved in development of an anatomical structure GOC:TermGenie negative regulation of apoptotic programmed cell death involved in anatomical structure development GOC:TermGenie negative regulation of apoptotic programmed cell death involved in development of an anatomical structure GOC:TermGenie negative regulation of programmed cell death by apoptosis involved in anatomical structure development GOC:TermGenie negative regulation of programmed cell death by apoptosis involved in development of an anatomical structure GOC:TermGenie down regulation of activation of apoptosis involved in anatomical structure development GOC:TermGenie down regulation of activation of apoptosis involved in development of an anatomical structure GOC:TermGenie down regulation of apoptosis involved in anatomical structure development GOC:TermGenie down regulation of apoptosis involved in development of an anatomical structure GOC:TermGenie down regulation of apoptosis signaling involved in anatomical structure development GOC:TermGenie down regulation of apoptosis signaling involved in development of an anatomical structure GOC:TermGenie down regulation of apoptotic program involved in anatomical structure development GOC:TermGenie down regulation of apoptotic program involved in development of an anatomical structure GOC:TermGenie down regulation of type I programmed cell death involved in anatomical structure development GOC:TermGenie down regulation of type I programmed cell death involved in development of an anatomical structure GOC:TermGenie down-regulation of activation of apoptosis involved in anatomical structure development GOC:TermGenie down-regulation of activation of apoptosis involved in development of an anatomical structure GOC:TermGenie down-regulation of apoptosis involved in anatomical structure development GOC:TermGenie down-regulation of apoptosis involved in development of an anatomical structure GOC:TermGenie down-regulation of apoptosis signaling involved in anatomical structure development GOC:TermGenie down-regulation of apoptosis signaling involved in development of an anatomical structure GOC:TermGenie down-regulation of apoptotic program involved in anatomical structure development GOC:TermGenie down-regulation of apoptotic program involved in development of an anatomical structure GOC:TermGenie down-regulation of type I programmed cell death involved in anatomical structure development GOC:TermGenie down-regulation of type I programmed cell death involved in development of an anatomical structure GOC:TermGenie downregulation of activation of apoptosis involved in anatomical structure development GOC:TermGenie downregulation of activation of apoptosis involved in development of an anatomical structure GOC:TermGenie downregulation of apoptosis involved in anatomical structure development GOC:TermGenie downregulation of apoptosis involved in development of an anatomical structure GOC:TermGenie downregulation of apoptosis signaling involved in anatomical structure development GOC:TermGenie downregulation of apoptosis signaling involved in development of an anatomical structure GOC:TermGenie downregulation of apoptotic program involved in anatomical structure development GOC:TermGenie downregulation of apoptotic program involved in development of an anatomical structure GOC:TermGenie downregulation of type I programmed cell death involved in anatomical structure development GOC:TermGenie downregulation of type I programmed cell death involved in development of an anatomical structure GOC:TermGenie inhibition of activation of apoptosis involved in anatomical structure development GOC:TermGenie inhibition of activation of apoptosis involved in development of an anatomical structure GOC:TermGenie inhibition of apoptosis involved in anatomical structure development GOC:TermGenie inhibition of apoptosis involved in development of an anatomical structure GOC:TermGenie inhibition of apoptosis signaling involved in anatomical structure development GOC:TermGenie inhibition of apoptosis signaling involved in development of an anatomical structure GOC:TermGenie inhibition of apoptotic cell death involved in anatomical structure development GOC:TermGenie inhibition of apoptotic cell death involved in development of an anatomical structure GOC:TermGenie inhibition of apoptotic process involved in anatomical structure development GOC:TermGenie inhibition of apoptotic process involved in development GOC:TermGenie inhibition of apoptotic process involved in development of an anatomical structure GOC:TermGenie inhibition of apoptotic program involved in anatomical structure development GOC:TermGenie inhibition of apoptotic program involved in development of an anatomical structure GOC:TermGenie inhibition of apoptotic programmed cell death involved in anatomical structure development GOC:TermGenie inhibition of apoptotic programmed cell death involved in development of an anatomical structure GOC:TermGenie inhibition of programmed cell death by apoptosis involved in anatomical structure development GOC:TermGenie inhibition of programmed cell death by apoptosis involved in development of an anatomical structure GOC:TermGenie inhibition of type I programmed cell death involved in anatomical structure development GOC:TermGenie inhibition of type I programmed cell death involved in development of an anatomical structure GOC:TermGenie negative regulation of activation of apoptosis involved in anatomical structure development GOC:TermGenie negative regulation of activation of apoptosis involved in development of an anatomical structure GOC:TermGenie negative regulation of apoptosis involved in anatomical structure development GOC:TermGenie negative regulation of apoptosis involved in development of an anatomical structure GOC:TermGenie negative regulation of apoptosis signaling involved in anatomical structure development GOC:TermGenie negative regulation of apoptosis signaling involved in development of an anatomical structure GOC:TermGenie negative regulation of apoptotic program involved in anatomical structure development GOC:TermGenie negative regulation of apoptotic program involved in development of an anatomical structure GOC:TermGenie negative regulation of type I programmed cell death involved in anatomical structure development GOC:TermGenie negative regulation of type I programmed cell death involved in development of an anatomical structure GOC:TermGenie down regulation of apoptosis activator activity involved in anatomical structure development GOC:TermGenie down regulation of apoptosis activator activity involved in development of an anatomical structure GOC:TermGenie down regulation of commitment to apoptosis involved in anatomical structure development GOC:TermGenie down regulation of commitment to apoptosis involved in development of an anatomical structure GOC:TermGenie down regulation of induction of apoptosis by p53 involved in anatomical structure development GOC:TermGenie down regulation of induction of apoptosis by p53 involved in development of an anatomical structure GOC:TermGenie down regulation of induction of apoptosis involved in anatomical structure development GOC:TermGenie down regulation of induction of apoptosis involved in development of an anatomical structure GOC:TermGenie down regulation of signaling (initiator) caspase activity involved in anatomical structure development GOC:TermGenie down regulation of signaling (initiator) caspase activity involved in development of an anatomical structure GOC:TermGenie down-regulation of apoptosis activator activity involved in anatomical structure development GOC:TermGenie down-regulation of apoptosis activator activity involved in development of an anatomical structure GOC:TermGenie down-regulation of commitment to apoptosis involved in anatomical structure development GOC:TermGenie down-regulation of commitment to apoptosis involved in development of an anatomical structure GOC:TermGenie down-regulation of induction of apoptosis by p53 involved in anatomical structure development GOC:TermGenie down-regulation of induction of apoptosis by p53 involved in development of an anatomical structure GOC:TermGenie down-regulation of induction of apoptosis involved in anatomical structure development GOC:TermGenie down-regulation of induction of apoptosis involved in development of an anatomical structure GOC:TermGenie down-regulation of signaling (initiator) caspase activity involved in anatomical structure development GOC:TermGenie down-regulation of signaling (initiator) caspase activity involved in development of an anatomical structure GOC:TermGenie downregulation of apoptosis activator activity involved in anatomical structure development GOC:TermGenie downregulation of apoptosis activator activity involved in development of an anatomical structure GOC:TermGenie downregulation of commitment to apoptosis involved in anatomical structure development GOC:TermGenie downregulation of commitment to apoptosis involved in development of an anatomical structure GOC:TermGenie downregulation of induction of apoptosis by p53 involved in anatomical structure development GOC:TermGenie downregulation of induction of apoptosis by p53 involved in development of an anatomical structure GOC:TermGenie downregulation of induction of apoptosis involved in anatomical structure development GOC:TermGenie downregulation of induction of apoptosis involved in development of an anatomical structure GOC:TermGenie downregulation of signaling (initiator) caspase activity involved in anatomical structure development GOC:TermGenie downregulation of signaling (initiator) caspase activity involved in development of an anatomical structure GOC:TermGenie inhibition of apoptosis activator activity involved in anatomical structure development GOC:TermGenie inhibition of apoptosis activator activity involved in development of an anatomical structure GOC:TermGenie inhibition of commitment to apoptosis involved in anatomical structure development GOC:TermGenie inhibition of commitment to apoptosis involved in development of an anatomical structure GOC:TermGenie inhibition of induction of apoptosis by p53 involved in anatomical structure development GOC:TermGenie inhibition of induction of apoptosis by p53 involved in development of an anatomical structure GOC:TermGenie inhibition of induction of apoptosis involved in anatomical structure development GOC:TermGenie inhibition of induction of apoptosis involved in development of an anatomical structure GOC:TermGenie inhibition of signaling (initiator) caspase activity involved in anatomical structure development GOC:TermGenie inhibition of signaling (initiator) caspase activity involved in development of an anatomical structure GOC:TermGenie negative regulation of apoptosis activator activity involved in anatomical structure development GOC:TermGenie negative regulation of apoptosis activator activity involved in development of an anatomical structure GOC:TermGenie negative regulation of commitment to apoptosis involved in anatomical structure development GOC:TermGenie negative regulation of commitment to apoptosis involved in development of an anatomical structure GOC:TermGenie negative regulation of induction of apoptosis by p53 involved in anatomical structure development GOC:TermGenie negative regulation of induction of apoptosis by p53 involved in development of an anatomical structure GOC:TermGenie negative regulation of induction of apoptosis involved in anatomical structure development GOC:TermGenie negative regulation of induction of apoptosis involved in development of an anatomical structure GOC:TermGenie negative regulation of signaling (initiator) caspase activity involved in anatomical structure development GOC:TermGenie negative regulation of signaling (initiator) caspase activity involved in development of an anatomical structure GOC:TermGenie Any process that activates or increases the frequency, rate or extent of apoptotic process involved in development. es 2015-10-19T14:12:34Z positive regulation of apoptotic cell death involved in anatomical structure development positive regulation of apoptotic cell death involved in development of an anatomical structure positive regulation of apoptotic process involved in anatomical structure development positive regulation of apoptotic process involved in development of an anatomical structure positive regulation of apoptotic programmed cell death involved in anatomical structure development positive regulation of apoptotic programmed cell death involved in development of an anatomical structure positive regulation of programmed cell death by apoptosis involved in anatomical structure development positive regulation of programmed cell death by apoptosis involved in development of an anatomical structure up regulation of apoptotic cell death involved in anatomical structure development up regulation of apoptotic cell death involved in development of an anatomical structure up regulation of apoptotic process involved in anatomical structure development up regulation of apoptotic process involved in development up regulation of apoptotic process involved in development of an anatomical structure up regulation of apoptotic programmed cell death involved in anatomical structure development up regulation of apoptotic programmed cell death involved in development of an anatomical structure up regulation of programmed cell death by apoptosis involved in anatomical structure development up regulation of programmed cell death by apoptosis involved in development of an anatomical structure up-regulation of apoptotic cell death involved in anatomical structure development up-regulation of apoptotic cell death involved in development of an anatomical structure up-regulation of apoptotic process involved in anatomical structure development up-regulation of apoptotic process involved in development up-regulation of apoptotic process involved in development of an anatomical structure up-regulation of apoptotic programmed cell death involved in anatomical structure development up-regulation of apoptotic programmed cell death involved in development of an anatomical structure up-regulation of programmed cell death by apoptosis involved in anatomical structure development up-regulation of programmed cell death by apoptosis involved in development of an anatomical structure upregulation of apoptotic cell death involved in anatomical structure development upregulation of apoptotic cell death involved in development of an anatomical structure upregulation of apoptotic process involved in anatomical structure development upregulation of apoptotic process involved in development upregulation of apoptotic process involved in development of an anatomical structure upregulation of apoptotic programmed cell death involved in anatomical structure development upregulation of apoptotic programmed cell death involved in development of an anatomical structure upregulation of programmed cell death by apoptosis involved in anatomical structure development upregulation of programmed cell death by apoptosis involved in development of an anatomical structure activation of activation of apoptosis involved in anatomical structure development activation of activation of apoptosis involved in development of an anatomical structure activation of apoptosis involved in anatomical structure development activation of apoptosis involved in development of an anatomical structure activation of apoptosis signaling involved in anatomical structure development activation of apoptosis signaling involved in development of an anatomical structure activation of apoptotic cell death involved in anatomical structure development activation of apoptotic cell death involved in development of an anatomical structure activation of apoptotic process involved in anatomical structure development activation of apoptotic process involved in development activation of apoptotic process involved in development of an anatomical structure activation of apoptotic program involved in anatomical structure development activation of apoptotic program involved in development of an anatomical structure activation of apoptotic programmed cell death involved in anatomical structure development activation of apoptotic programmed cell death involved in development of an anatomical structure activation of programmed cell death by apoptosis involved in anatomical structure development activation of programmed cell death by apoptosis involved in development of an anatomical structure activation of type I programmed cell death involved in anatomical structure development activation of type I programmed cell death involved in development of an anatomical structure positive regulation of activation of apoptosis involved in anatomical structure development positive regulation of activation of apoptosis involved in development of an anatomical structure positive regulation of apoptosis involved in anatomical structure development positive regulation of apoptosis involved in development of an anatomical structure positive regulation of apoptosis signaling involved in anatomical structure development positive regulation of apoptosis signaling involved in development of an anatomical structure positive regulation of apoptotic program involved in anatomical structure development positive regulation of apoptotic program involved in development of an anatomical structure positive regulation of type I programmed cell death involved in anatomical structure development positive regulation of type I programmed cell death involved in development of an anatomical structure up regulation of activation of apoptosis involved in anatomical structure development up regulation of activation of apoptosis involved in development of an anatomical structure up regulation of apoptosis involved in anatomical structure development up regulation of apoptosis involved in development of an anatomical structure up regulation of apoptosis signaling involved in anatomical structure development up regulation of apoptosis signaling involved in development of an anatomical structure up regulation of apoptotic program involved in anatomical structure development up regulation of apoptotic program involved in development of an anatomical structure up regulation of type I programmed cell death involved in anatomical structure development up regulation of type I programmed cell death involved in development of an anatomical structure up-regulation of activation of apoptosis involved in anatomical structure development up-regulation of activation of apoptosis involved in development of an anatomical structure up-regulation of apoptosis involved in anatomical structure development up-regulation of apoptosis involved in development of an anatomical structure up-regulation of apoptosis signaling involved in anatomical structure development up-regulation of apoptosis signaling involved in development of an anatomical structure up-regulation of apoptotic program involved in anatomical structure development up-regulation of apoptotic program involved in development of an anatomical structure up-regulation of type I programmed cell death involved in anatomical structure development up-regulation of type I programmed cell death involved in development of an anatomical structure upregulation of activation of apoptosis involved in anatomical structure development upregulation of activation of apoptosis involved in development of an anatomical structure upregulation of apoptosis involved in anatomical structure development upregulation of apoptosis involved in development of an anatomical structure upregulation of apoptosis signaling involved in anatomical structure development upregulation of apoptosis signaling involved in development of an anatomical structure upregulation of apoptotic program involved in anatomical structure development upregulation of apoptotic program involved in development of an anatomical structure upregulation of type I programmed cell death involved in anatomical structure development upregulation of type I programmed cell death involved in development of an anatomical structure biological_process activation of apoptosis activator activity involved in anatomical structure development activation of apoptosis activator activity involved in development of an anatomical structure activation of commitment to apoptosis involved in anatomical structure development activation of commitment to apoptosis involved in development of an anatomical structure activation of induction of apoptosis by p53 involved in anatomical structure development activation of induction of apoptosis by p53 involved in development of an anatomical structure activation of induction of apoptosis involved in anatomical structure development activation of induction of apoptosis involved in development of an anatomical structure activation of signaling (initiator) caspase activity involved in anatomical structure development activation of signaling (initiator) caspase activity involved in development of an anatomical structure positive regulation of apoptosis activator activity involved in anatomical structure development positive regulation of apoptosis activator activity involved in development of an anatomical structure positive regulation of commitment to apoptosis involved in anatomical structure development positive regulation of commitment to apoptosis involved in development of an anatomical structure positive regulation of induction of apoptosis by p53 involved in anatomical structure development positive regulation of induction of apoptosis by p53 involved in development of an anatomical structure positive regulation of induction of apoptosis involved in anatomical structure development positive regulation of induction of apoptosis involved in development of an anatomical structure positive regulation of signaling (initiator) caspase activity involved in anatomical structure development positive regulation of signaling (initiator) caspase activity involved in development of an anatomical structure up regulation of apoptosis activator activity involved in anatomical structure development up regulation of apoptosis activator activity involved in development of an anatomical structure up regulation of commitment to apoptosis involved in anatomical structure development up regulation of commitment to apoptosis involved in development of an anatomical structure up regulation of induction of apoptosis by p53 involved in anatomical structure development up regulation of induction of apoptosis by p53 involved in development of an anatomical structure up regulation of induction of apoptosis involved in anatomical structure development up regulation of induction of apoptosis involved in development of an anatomical structure up regulation of signaling (initiator) caspase activity involved in anatomical structure development up regulation of signaling (initiator) caspase activity involved in development of an anatomical structure up-regulation of apoptosis activator activity involved in anatomical structure development up-regulation of apoptosis activator activity involved in development of an anatomical structure up-regulation of commitment to apoptosis involved in anatomical structure development up-regulation of commitment to apoptosis involved in development of an anatomical structure up-regulation of induction of apoptosis by p53 involved in anatomical structure development up-regulation of induction of apoptosis by p53 involved in development of an anatomical structure up-regulation of induction of apoptosis involved in anatomical structure development up-regulation of induction of apoptosis involved in development of an anatomical structure up-regulation of signaling (initiator) caspase activity involved in anatomical structure development up-regulation of signaling (initiator) caspase activity involved in development of an anatomical structure upregulation of apoptosis activator activity involved in anatomical structure development upregulation of apoptosis activator activity involved in development of an anatomical structure upregulation of commitment to apoptosis involved in anatomical structure development upregulation of commitment to apoptosis involved in development of an anatomical structure upregulation of induction of apoptosis by p53 involved in anatomical structure development upregulation of induction of apoptosis by p53 involved in development of an anatomical structure upregulation of induction of apoptosis involved in anatomical structure development upregulation of induction of apoptosis involved in development of an anatomical structure upregulation of signaling (initiator) caspase activity involved in anatomical structure development upregulation of signaling (initiator) caspase activity involved in development of an anatomical structure GO:1904747 U4PR86 in PMID:22801495 inferred from mutant phenotype positive regulation of apoptotic process involved in development GO:1904747 Any process that activates or increases the frequency, rate or extent of apoptotic process involved in development. GOC:TermGenie GO_REF:0000058 PMID:22801495 positive regulation of apoptotic cell death involved in anatomical structure development GOC:TermGenie positive regulation of apoptotic cell death involved in development of an anatomical structure GOC:TermGenie positive regulation of apoptotic process involved in anatomical structure development GOC:TermGenie positive regulation of apoptotic process involved in development of an anatomical structure GOC:TermGenie positive regulation of apoptotic programmed cell death involved in anatomical structure development GOC:TermGenie positive regulation of apoptotic programmed cell death involved in development of an anatomical structure GOC:TermGenie positive regulation of programmed cell death by apoptosis involved in anatomical structure development GOC:TermGenie positive regulation of programmed cell death by apoptosis involved in development of an anatomical structure GOC:TermGenie up regulation of apoptotic cell death involved in anatomical structure development GOC:TermGenie up regulation of apoptotic cell death involved in development of an anatomical structure GOC:TermGenie up regulation of apoptotic process involved in anatomical structure development GOC:TermGenie up regulation of apoptotic process involved in development GOC:TermGenie up regulation of apoptotic process involved in development of an anatomical structure GOC:TermGenie up regulation of apoptotic programmed cell death involved in anatomical structure development GOC:TermGenie up regulation of apoptotic programmed cell death involved in development of an anatomical structure GOC:TermGenie up regulation of programmed cell death by apoptosis involved in anatomical structure development GOC:TermGenie up regulation of programmed cell death by apoptosis involved in development of an anatomical structure GOC:TermGenie up-regulation of apoptotic cell death involved in anatomical structure development GOC:TermGenie up-regulation of apoptotic cell death involved in development of an anatomical structure GOC:TermGenie up-regulation of apoptotic process involved in anatomical structure development GOC:TermGenie up-regulation of apoptotic process involved in development GOC:TermGenie up-regulation of apoptotic process involved in development of an anatomical structure GOC:TermGenie up-regulation of apoptotic programmed cell death involved in anatomical structure development GOC:TermGenie up-regulation of apoptotic programmed cell death involved in development of an anatomical structure GOC:TermGenie up-regulation of programmed cell death by apoptosis involved in anatomical structure development GOC:TermGenie up-regulation of programmed cell death by apoptosis involved in development of an anatomical structure GOC:TermGenie upregulation of apoptotic cell death involved in anatomical structure development GOC:TermGenie upregulation of apoptotic cell death involved in development of an anatomical structure GOC:TermGenie upregulation of apoptotic process involved in anatomical structure development GOC:TermGenie upregulation of apoptotic process involved in development GOC:TermGenie upregulation of apoptotic process involved in development of an anatomical structure GOC:TermGenie upregulation of apoptotic programmed cell death involved in anatomical structure development GOC:TermGenie upregulation of apoptotic programmed cell death involved in development of an anatomical structure GOC:TermGenie upregulation of programmed cell death by apoptosis involved in anatomical structure development GOC:TermGenie upregulation of programmed cell death by apoptosis involved in development of an anatomical structure GOC:TermGenie activation of activation of apoptosis involved in anatomical structure development GOC:TermGenie activation of activation of apoptosis involved in development of an anatomical structure GOC:TermGenie activation of apoptosis involved in anatomical structure development GOC:TermGenie activation of apoptosis involved in development of an anatomical structure GOC:TermGenie activation of apoptosis signaling involved in anatomical structure development GOC:TermGenie activation of apoptosis signaling involved in development of an anatomical structure GOC:TermGenie activation of apoptotic cell death involved in anatomical structure development GOC:TermGenie activation of apoptotic cell death involved in development of an anatomical structure GOC:TermGenie activation of apoptotic process involved in anatomical structure development GOC:TermGenie activation of apoptotic process involved in development GOC:TermGenie activation of apoptotic process involved in development of an anatomical structure GOC:TermGenie activation of apoptotic program involved in anatomical structure development GOC:TermGenie activation of apoptotic program involved in development of an anatomical structure GOC:TermGenie activation of apoptotic programmed cell death involved in anatomical structure development GOC:TermGenie activation of apoptotic programmed cell death involved in development of an anatomical structure GOC:TermGenie activation of programmed cell death by apoptosis involved in anatomical structure development GOC:TermGenie activation of programmed cell death by apoptosis involved in development of an anatomical structure GOC:TermGenie activation of type I programmed cell death involved in anatomical structure development GOC:TermGenie activation of type I programmed cell death involved in development of an anatomical structure GOC:TermGenie positive regulation of activation of apoptosis involved in anatomical structure development GOC:TermGenie positive regulation of activation of apoptosis involved in development of an anatomical structure GOC:TermGenie positive regulation of apoptosis involved in anatomical structure development GOC:TermGenie positive regulation of apoptosis involved in development of an anatomical structure GOC:TermGenie positive regulation of apoptosis signaling involved in anatomical structure development GOC:TermGenie positive regulation of apoptosis signaling involved in development of an anatomical structure GOC:TermGenie positive regulation of apoptotic program involved in anatomical structure development GOC:TermGenie positive regulation of apoptotic program involved in development of an anatomical structure GOC:TermGenie positive regulation of type I programmed cell death involved in anatomical structure development GOC:TermGenie positive regulation of type I programmed cell death involved in development of an anatomical structure GOC:TermGenie up regulation of activation of apoptosis involved in anatomical structure development GOC:TermGenie up regulation of activation of apoptosis involved in development of an anatomical structure GOC:TermGenie up regulation of apoptosis involved in anatomical structure development GOC:TermGenie up regulation of apoptosis involved in development of an anatomical structure GOC:TermGenie up regulation of apoptosis signaling involved in anatomical structure development GOC:TermGenie up regulation of apoptosis signaling involved in development of an anatomical structure GOC:TermGenie up regulation of apoptotic program involved in anatomical structure development GOC:TermGenie up regulation of apoptotic program involved in development of an anatomical structure GOC:TermGenie up regulation of type I programmed cell death involved in anatomical structure development GOC:TermGenie up regulation of type I programmed cell death involved in development of an anatomical structure GOC:TermGenie up-regulation of activation of apoptosis involved in anatomical structure development GOC:TermGenie up-regulation of activation of apoptosis involved in development of an anatomical structure GOC:TermGenie up-regulation of apoptosis involved in anatomical structure development GOC:TermGenie up-regulation of apoptosis involved in development of an anatomical structure GOC:TermGenie up-regulation of apoptosis signaling involved in anatomical structure development GOC:TermGenie up-regulation of apoptosis signaling involved in development of an anatomical structure GOC:TermGenie up-regulation of apoptotic program involved in anatomical structure development GOC:TermGenie up-regulation of apoptotic program involved in development of an anatomical structure GOC:TermGenie up-regulation of type I programmed cell death involved in anatomical structure development GOC:TermGenie up-regulation of type I programmed cell death involved in development of an anatomical structure GOC:TermGenie upregulation of activation of apoptosis involved in anatomical structure development GOC:TermGenie upregulation of activation of apoptosis involved in development of an anatomical structure GOC:TermGenie upregulation of apoptosis involved in anatomical structure development GOC:TermGenie upregulation of apoptosis involved in development of an anatomical structure GOC:TermGenie upregulation of apoptosis signaling involved in anatomical structure development GOC:TermGenie upregulation of apoptosis signaling involved in development of an anatomical structure GOC:TermGenie upregulation of apoptotic program involved in anatomical structure development GOC:TermGenie upregulation of apoptotic program involved in development of an anatomical structure GOC:TermGenie upregulation of type I programmed cell death involved in anatomical structure development GOC:TermGenie upregulation of type I programmed cell death involved in development of an anatomical structure GOC:TermGenie activation of apoptosis activator activity involved in anatomical structure development GOC:TermGenie activation of apoptosis activator activity involved in development of an anatomical structure GOC:TermGenie activation of commitment to apoptosis involved in anatomical structure development GOC:TermGenie activation of commitment to apoptosis involved in development of an anatomical structure GOC:TermGenie activation of induction of apoptosis by p53 involved in anatomical structure development GOC:TermGenie activation of induction of apoptosis by p53 involved in development of an anatomical structure GOC:TermGenie activation of induction of apoptosis involved in anatomical structure development GOC:TermGenie activation of induction of apoptosis involved in development of an anatomical structure GOC:TermGenie activation of signaling (initiator) caspase activity involved in anatomical structure development GOC:TermGenie activation of signaling (initiator) caspase activity involved in development of an anatomical structure GOC:TermGenie positive regulation of apoptosis activator activity involved in anatomical structure development GOC:TermGenie positive regulation of apoptosis activator activity involved in development of an anatomical structure GOC:TermGenie positive regulation of commitment to apoptosis involved in anatomical structure development GOC:TermGenie positive regulation of commitment to apoptosis involved in development of an anatomical structure GOC:TermGenie positive regulation of induction of apoptosis by p53 involved in anatomical structure development GOC:TermGenie positive regulation of induction of apoptosis by p53 involved in development of an anatomical structure GOC:TermGenie positive regulation of induction of apoptosis involved in anatomical structure development GOC:TermGenie positive regulation of induction of apoptosis involved in development of an anatomical structure GOC:TermGenie positive regulation of signaling (initiator) caspase activity involved in anatomical structure development GOC:TermGenie positive regulation of signaling (initiator) caspase activity involved in development of an anatomical structure GOC:TermGenie up regulation of apoptosis activator activity involved in anatomical structure development GOC:TermGenie up regulation of apoptosis activator activity involved in development of an anatomical structure GOC:TermGenie up regulation of commitment to apoptosis involved in anatomical structure development GOC:TermGenie up regulation of commitment to apoptosis involved in development of an anatomical structure GOC:TermGenie up regulation of induction of apoptosis by p53 involved in anatomical structure development GOC:TermGenie up regulation of induction of apoptosis by p53 involved in development of an anatomical structure GOC:TermGenie up regulation of induction of apoptosis involved in anatomical structure development GOC:TermGenie up regulation of induction of apoptosis involved in development of an anatomical structure GOC:TermGenie up regulation of signaling (initiator) caspase activity involved in anatomical structure development GOC:TermGenie up regulation of signaling (initiator) caspase activity involved in development of an anatomical structure GOC:TermGenie up-regulation of apoptosis activator activity involved in anatomical structure development GOC:TermGenie up-regulation of apoptosis activator activity involved in development of an anatomical structure GOC:TermGenie up-regulation of commitment to apoptosis involved in anatomical structure development GOC:TermGenie up-regulation of commitment to apoptosis involved in development of an anatomical structure GOC:TermGenie up-regulation of induction of apoptosis by p53 involved in anatomical structure development GOC:TermGenie up-regulation of induction of apoptosis by p53 involved in development of an anatomical structure GOC:TermGenie up-regulation of induction of apoptosis involved in anatomical structure development GOC:TermGenie up-regulation of induction of apoptosis involved in development of an anatomical structure GOC:TermGenie up-regulation of signaling (initiator) caspase activity involved in anatomical structure development GOC:TermGenie up-regulation of signaling (initiator) caspase activity involved in development of an anatomical structure GOC:TermGenie upregulation of apoptosis activator activity involved in anatomical structure development GOC:TermGenie upregulation of apoptosis activator activity involved in development of an anatomical structure GOC:TermGenie upregulation of commitment to apoptosis involved in anatomical structure development GOC:TermGenie upregulation of commitment to apoptosis involved in development of an anatomical structure GOC:TermGenie upregulation of induction of apoptosis by p53 involved in anatomical structure development GOC:TermGenie upregulation of induction of apoptosis by p53 involved in development of an anatomical structure GOC:TermGenie upregulation of induction of apoptosis involved in anatomical structure development GOC:TermGenie upregulation of induction of apoptosis involved in development of an anatomical structure GOC:TermGenie upregulation of signaling (initiator) caspase activity involved in anatomical structure development GOC:TermGenie upregulation of signaling (initiator) caspase activity involved in development of an anatomical structure GOC:TermGenie Any process that modulates the frequency, rate or extent of apoptotic process involved in development. es 2015-10-19T15:02:28Z regulation of apoptotic cell death involved in anatomical structure development regulation of apoptotic cell death involved in development of an anatomical structure regulation of apoptotic process involved in anatomical structure development regulation of apoptotic process involved in development of an anatomical structure regulation of apoptotic programmed cell death involved in anatomical structure development regulation of apoptotic programmed cell death involved in development of an anatomical structure regulation of programmed cell death by apoptosis involved in anatomical structure development regulation of programmed cell death by apoptosis involved in development of an anatomical structure regulation of activation of apoptosis involved in anatomical structure development regulation of activation of apoptosis involved in development of an anatomical structure regulation of apoptosis involved in anatomical structure development regulation of apoptosis involved in development of an anatomical structure regulation of apoptosis signaling involved in anatomical structure development regulation of apoptosis signaling involved in development of an anatomical structure regulation of apoptotic program involved in anatomical structure development regulation of apoptotic program involved in development of an anatomical structure regulation of type I programmed cell death involved in anatomical structure development regulation of type I programmed cell death involved in development of an anatomical structure biological_process regulation of apoptosis activator activity involved in anatomical structure development regulation of apoptosis activator activity involved in development of an anatomical structure regulation of commitment to apoptosis involved in anatomical structure development regulation of commitment to apoptosis involved in development of an anatomical structure regulation of induction of apoptosis by p53 involved in anatomical structure development regulation of induction of apoptosis by p53 involved in development of an anatomical structure regulation of induction of apoptosis involved in anatomical structure development regulation of induction of apoptosis involved in development of an anatomical structure regulation of signaling (initiator) caspase activity involved in anatomical structure development regulation of signaling (initiator) caspase activity involved in development of an anatomical structure GO:1904748 Q10943 in PMID:22801495, inferred from mutant phenotype regulation of apoptotic process involved in development GO:1904748 Any process that modulates the frequency, rate or extent of apoptotic process involved in development. GOC:TermGenie GO_REF:0000058 PMID:22801495 regulation of apoptotic cell death involved in anatomical structure development GOC:TermGenie regulation of apoptotic cell death involved in development of an anatomical structure GOC:TermGenie regulation of apoptotic process involved in anatomical structure development GOC:TermGenie regulation of apoptotic process involved in development of an anatomical structure GOC:TermGenie regulation of apoptotic programmed cell death involved in anatomical structure development GOC:TermGenie regulation of apoptotic programmed cell death involved in development of an anatomical structure GOC:TermGenie regulation of programmed cell death by apoptosis involved in anatomical structure development GOC:TermGenie regulation of programmed cell death by apoptosis involved in development of an anatomical structure GOC:TermGenie regulation of activation of apoptosis involved in anatomical structure development GOC:TermGenie regulation of activation of apoptosis involved in development of an anatomical structure GOC:TermGenie regulation of apoptosis involved in anatomical structure development GOC:TermGenie regulation of apoptosis involved in development of an anatomical structure GOC:TermGenie regulation of apoptosis signaling involved in anatomical structure development GOC:TermGenie regulation of apoptosis signaling involved in development of an anatomical structure GOC:TermGenie regulation of apoptotic program involved in anatomical structure development GOC:TermGenie regulation of apoptotic program involved in development of an anatomical structure GOC:TermGenie regulation of type I programmed cell death involved in anatomical structure development GOC:TermGenie regulation of type I programmed cell death involved in development of an anatomical structure GOC:TermGenie regulation of apoptosis activator activity involved in anatomical structure development GOC:TermGenie regulation of apoptosis activator activity involved in development of an anatomical structure GOC:TermGenie regulation of commitment to apoptosis involved in anatomical structure development GOC:TermGenie regulation of commitment to apoptosis involved in development of an anatomical structure GOC:TermGenie regulation of induction of apoptosis by p53 involved in anatomical structure development GOC:TermGenie regulation of induction of apoptosis by p53 involved in development of an anatomical structure GOC:TermGenie regulation of induction of apoptosis involved in anatomical structure development GOC:TermGenie regulation of induction of apoptosis involved in development of an anatomical structure GOC:TermGenie regulation of signaling (initiator) caspase activity involved in anatomical structure development GOC:TermGenie regulation of signaling (initiator) caspase activity involved in development of an anatomical structure GOC:TermGenie Any process that modulates the frequency, rate or extent of protein localization to nucleolus. nc 2015-10-19T15:16:17Z regulation of protein localisation in nucleolus regulation of protein localisation to nucleolus regulation of protein localization in nucleolus biological_process GO:1904749 regulation of protein localization to nucleolus GO:1904749 Any process that modulates the frequency, rate or extent of protein localization to nucleolus. GOC:BHF GOC:BHF_telomere GOC:TermGenie GOC:nc GO_REF:0000058 PMID:24415760 regulation of protein localisation in nucleolus GOC:TermGenie regulation of protein localisation to nucleolus GOC:TermGenie regulation of protein localization in nucleolus GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to nucleolus. nc 2015-10-19T15:16:24Z down regulation of protein localisation in nucleolus down regulation of protein localisation to nucleolus down regulation of protein localization in nucleolus down regulation of protein localization to nucleolus down-regulation of protein localisation in nucleolus down-regulation of protein localisation to nucleolus down-regulation of protein localization in nucleolus down-regulation of protein localization to nucleolus downregulation of protein localisation in nucleolus downregulation of protein localisation to nucleolus downregulation of protein localization in nucleolus downregulation of protein localization to nucleolus negative regulation of protein localisation in nucleolus negative regulation of protein localisation to nucleolus negative regulation of protein localization in nucleolus inhibition of protein localisation in nucleolus inhibition of protein localisation to nucleolus inhibition of protein localization in nucleolus inhibition of protein localization to nucleolus biological_process GO:1904750 negative regulation of protein localization to nucleolus GO:1904750 Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to nucleolus. GOC:BHF GOC:BHF_telomere GOC:TermGenie GOC:nc GO_REF:0000058 PMID:24415760 down regulation of protein localisation in nucleolus GOC:TermGenie down regulation of protein localisation to nucleolus GOC:TermGenie down regulation of protein localization in nucleolus GOC:TermGenie down regulation of protein localization to nucleolus GOC:TermGenie down-regulation of protein localisation in nucleolus GOC:TermGenie down-regulation of protein localisation to nucleolus GOC:TermGenie down-regulation of protein localization in nucleolus GOC:TermGenie down-regulation of protein localization to nucleolus GOC:TermGenie downregulation of protein localisation in nucleolus GOC:TermGenie downregulation of protein localisation to nucleolus GOC:TermGenie downregulation of protein localization in nucleolus GOC:TermGenie downregulation of protein localization to nucleolus GOC:TermGenie negative regulation of protein localisation in nucleolus GOC:TermGenie negative regulation of protein localisation to nucleolus GOC:TermGenie negative regulation of protein localization in nucleolus GOC:TermGenie inhibition of protein localisation in nucleolus GOC:TermGenie inhibition of protein localisation to nucleolus GOC:TermGenie inhibition of protein localization in nucleolus GOC:TermGenie inhibition of protein localization to nucleolus GOC:TermGenie Any process that activates or increases the frequency, rate or extent of protein localization to nucleolus. nc 2015-10-19T15:16:30Z positive regulation of protein localisation in nucleolus positive regulation of protein localisation to nucleolus positive regulation of protein localization in nucleolus up regulation of protein localisation in nucleolus up regulation of protein localisation to nucleolus up regulation of protein localization in nucleolus up regulation of protein localization to nucleolus up-regulation of protein localisation in nucleolus up-regulation of protein localisation to nucleolus up-regulation of protein localization in nucleolus up-regulation of protein localization to nucleolus upregulation of protein localisation in nucleolus upregulation of protein localisation to nucleolus upregulation of protein localization in nucleolus upregulation of protein localization to nucleolus activation of protein localisation in nucleolus activation of protein localisation to nucleolus activation of protein localization in nucleolus activation of protein localization to nucleolus biological_process GO:1904751 positive regulation of protein localization to nucleolus GO:1904751 Any process that activates or increases the frequency, rate or extent of protein localization to nucleolus. GOC:BHF GOC:BHF_telomere GOC:TermGenie GOC:nc GO_REF:0000058 PMID:24415760 positive regulation of protein localisation in nucleolus GOC:TermGenie positive regulation of protein localisation to nucleolus GOC:TermGenie positive regulation of protein localization in nucleolus GOC:TermGenie up regulation of protein localisation in nucleolus GOC:TermGenie up regulation of protein localisation to nucleolus GOC:TermGenie up regulation of protein localization in nucleolus GOC:TermGenie up regulation of protein localization to nucleolus GOC:TermGenie up-regulation of protein localisation in nucleolus GOC:TermGenie up-regulation of protein localisation to nucleolus GOC:TermGenie up-regulation of protein localization in nucleolus GOC:TermGenie up-regulation of protein localization to nucleolus GOC:TermGenie upregulation of protein localisation in nucleolus GOC:TermGenie upregulation of protein localisation to nucleolus GOC:TermGenie upregulation of protein localization in nucleolus GOC:TermGenie upregulation of protein localization to nucleolus GOC:TermGenie activation of protein localisation in nucleolus GOC:TermGenie activation of protein localisation to nucleolus GOC:TermGenie activation of protein localization in nucleolus GOC:TermGenie activation of protein localization to nucleolus GOC:TermGenie Any process that modulates the frequency, rate or extent of vascular associated smooth muscle cell migration. rph 2015-10-19T15:49:52Z regulation of vascular smooth muscle cell migration biological_process GO:1904752 regulation of vascular associated smooth muscle cell migration GO:1904752 Any process that modulates the frequency, rate or extent of vascular associated smooth muscle cell migration. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:20693317 regulation of vascular smooth muscle cell migration GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of vascular associated smooth muscle cell migration. rph 2015-10-19T15:49:58Z down regulation of vascular associated smooth muscle cell migration down regulation of vascular smooth muscle cell migration down-regulation of vascular associated smooth muscle cell migration down-regulation of vascular smooth muscle cell migration downregulation of vascular associated smooth muscle cell migration downregulation of vascular smooth muscle cell migration negative regulation of vascular smooth muscle cell migration inhibition of vascular associated smooth muscle cell migration inhibition of vascular smooth muscle cell migration biological_process GO:1904753 negative regulation of vascular associated smooth muscle cell migration GO:1904753 Any process that stops, prevents or reduces the frequency, rate or extent of vascular associated smooth muscle cell migration. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:20693317 down regulation of vascular associated smooth muscle cell migration GOC:TermGenie down regulation of vascular smooth muscle cell migration GOC:TermGenie down-regulation of vascular associated smooth muscle cell migration GOC:TermGenie down-regulation of vascular smooth muscle cell migration GOC:TermGenie downregulation of vascular associated smooth muscle cell migration GOC:TermGenie downregulation of vascular smooth muscle cell migration GOC:TermGenie negative regulation of vascular smooth muscle cell migration GOC:TermGenie inhibition of vascular associated smooth muscle cell migration GOC:TermGenie inhibition of vascular smooth muscle cell migration GOC:TermGenie Any process that activates or increases the frequency, rate or extent of vascular associated smooth muscle cell migration. rph 2015-10-19T15:50:05Z positive regulation of vascular smooth muscle cell migration up regulation of vascular associated smooth muscle cell migration up regulation of vascular smooth muscle cell migration up-regulation of vascular associated smooth muscle cell migration up-regulation of vascular smooth muscle cell migration upregulation of vascular associated smooth muscle cell migration upregulation of vascular smooth muscle cell migration activation of vascular associated smooth muscle cell migration activation of vascular smooth muscle cell migration biological_process GO:1904754 positive regulation of vascular associated smooth muscle cell migration GO:1904754 Any process that activates or increases the frequency, rate or extent of vascular associated smooth muscle cell migration. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:20693317 positive regulation of vascular smooth muscle cell migration GOC:TermGenie up regulation of vascular associated smooth muscle cell migration GOC:TermGenie up regulation of vascular smooth muscle cell migration GOC:TermGenie up-regulation of vascular associated smooth muscle cell migration GOC:TermGenie up-regulation of vascular smooth muscle cell migration GOC:TermGenie upregulation of vascular associated smooth muscle cell migration GOC:TermGenie upregulation of vascular smooth muscle cell migration GOC:TermGenie activation of vascular associated smooth muscle cell migration GOC:TermGenie activation of vascular smooth muscle cell migration GOC:TermGenie The developmental process by which an intramembranous bone is generated and organized. dos 2015-10-28T11:46:04Z biological_process intramembranous bones morphogenesis membrane bone morphogenesis GO:1904770 intramembranous bone morphogenesis GO:1904770 The developmental process by which an intramembranous bone is generated and organized. GOC:TermGenie GO_REF:0000083 PMID:26399686 intramembranous bones morphogenesis GOC:TermGenie membrane bone morphogenesis GOC:TermGenie Any process that modulates the frequency, rate or extent of protein localization to cell cortex. es 2015-10-29T16:55:01Z regulation of protein localisation to cell cortex biological_process GO:1904776 An example is cye-1 in C. elegans, UniProt ID O01501 in PMID:17115027. regulation of protein localization to cell cortex GO:1904776 Any process that modulates the frequency, rate or extent of protein localization to cell cortex. GOC:TermGenie GO_REF:0000058 PMID:17115027 regulation of protein localisation to cell cortex GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell cortex. es 2015-10-29T16:55:08Z down regulation of protein localisation to cell cortex down regulation of protein localization to cell cortex down-regulation of protein localisation to cell cortex down-regulation of protein localization to cell cortex downregulation of protein localisation to cell cortex downregulation of protein localization to cell cortex negative regulation of protein localisation to cell cortex inhibition of protein localisation to cell cortex inhibition of protein localization to cell cortex biological_process GO:1904777 An example is cye-1 in C. elegans, UniProt ID O01501 in PMID:17115027. negative regulation of protein localization to cell cortex GO:1904777 Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell cortex. GOC:TermGenie GO_REF:0000058 PMID:17115027 down regulation of protein localisation to cell cortex GOC:TermGenie down regulation of protein localization to cell cortex GOC:TermGenie down-regulation of protein localisation to cell cortex GOC:TermGenie down-regulation of protein localization to cell cortex GOC:TermGenie downregulation of protein localisation to cell cortex GOC:TermGenie downregulation of protein localization to cell cortex GOC:TermGenie negative regulation of protein localisation to cell cortex GOC:TermGenie inhibition of protein localisation to cell cortex GOC:TermGenie inhibition of protein localization to cell cortex GOC:TermGenie Any process that activates or increases the frequency, rate or extent of protein localization to cell cortex. es 2015-10-29T16:55:15Z positive regulation of protein localisation to cell cortex up regulation of protein localisation to cell cortex up regulation of protein localization to cell cortex up-regulation of protein localisation to cell cortex up-regulation of protein localization to cell cortex upregulation of protein localisation to cell cortex upregulation of protein localization to cell cortex activation of protein localisation to cell cortex activation of protein localization to cell cortex biological_process GO:1904778 An example is cye-1 in C. elegans, UniProt ID O01501 in PMID:17115027. positive regulation of protein localization to cell cortex GO:1904778 Any process that activates or increases the frequency, rate or extent of protein localization to cell cortex. GOC:TermGenie GO_REF:0000058 PMID:17115027 positive regulation of protein localisation to cell cortex GOC:TermGenie up regulation of protein localisation to cell cortex GOC:TermGenie up regulation of protein localization to cell cortex GOC:TermGenie up-regulation of protein localisation to cell cortex GOC:TermGenie up-regulation of protein localization to cell cortex GOC:TermGenie upregulation of protein localisation to cell cortex GOC:TermGenie upregulation of protein localization to cell cortex GOC:TermGenie activation of protein localisation to cell cortex GOC:TermGenie activation of protein localization to cell cortex GOC:TermGenie Any process that modulates the frequency, rate or extent of dense core granule transport. es 2015-11-11T10:40:10Z regulation of dense core vesicle transport biological_process GO:1904809 cdk-5 in C.elegans (G5ECH7) in PMID:22699897 (inferred from mutant phenotype). regulation of dense core granule transport GO:1904809 Any process that modulates the frequency, rate or extent of dense core granule transport. GOC:TermGenie GO_REF:0000058 PMID:22699897 regulation of dense core vesicle transport GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of dense core granule transport. es 2015-11-11T10:40:18Z down regulation of dense core granule transport down regulation of dense core vesicle transport down-regulation of dense core granule transport down-regulation of dense core vesicle transport downregulation of dense core granule transport downregulation of dense core vesicle transport negative regulation of dense core vesicle transport inhibition of dense core granule transport inhibition of dense core vesicle transport biological_process GO:1904810 cdk-5 in C.elegans (G5ECH7) in PMID:22699897 (inferred from mutant phenotype). negative regulation of dense core granule transport GO:1904810 Any process that stops, prevents or reduces the frequency, rate or extent of dense core granule transport. GOC:TermGenie GO_REF:0000058 PMID:22699897 down regulation of dense core granule transport GOC:TermGenie down regulation of dense core vesicle transport GOC:TermGenie down-regulation of dense core granule transport GOC:TermGenie down-regulation of dense core vesicle transport GOC:TermGenie downregulation of dense core granule transport GOC:TermGenie downregulation of dense core vesicle transport GOC:TermGenie negative regulation of dense core vesicle transport GOC:TermGenie inhibition of dense core granule transport GOC:TermGenie inhibition of dense core vesicle transport GOC:TermGenie Any process that activates or increases the frequency, rate or extent of dense core granule transport. es 2015-11-11T10:40:25Z positive regulation of dense core vesicle transport up regulation of dense core granule transport up regulation of dense core vesicle transport up-regulation of dense core granule transport up-regulation of dense core vesicle transport upregulation of dense core granule transport upregulation of dense core vesicle transport activation of dense core granule transport activation of dense core vesicle transport biological_process GO:1904811 cdk-5 in C.elegans (G5ECH7) in PMID:22699897 (inferred from mutant phenotype). positive regulation of dense core granule transport GO:1904811 Any process that activates or increases the frequency, rate or extent of dense core granule transport. GOC:TermGenie GO_REF:0000058 PMID:22699897 positive regulation of dense core vesicle transport GOC:TermGenie up regulation of dense core granule transport GOC:TermGenie up regulation of dense core vesicle transport GOC:TermGenie up-regulation of dense core granule transport GOC:TermGenie up-regulation of dense core vesicle transport GOC:TermGenie upregulation of dense core granule transport GOC:TermGenie upregulation of dense core vesicle transport GOC:TermGenie activation of dense core granule transport GOC:TermGenie activation of dense core vesicle transport GOC:TermGenie The process whose specific outcome is the progression of a serous membrane over time, from its formation to the mature structure. dph 2015-11-17T19:00:01Z tunica serosa development wall of serous sac development biological_process serosa development GO:1904817 serous membrane development GO:1904817 The process whose specific outcome is the progression of a serous membrane over time, from its formation to the mature structure. GOC:TermGenie GOC:dph GO_REF:0000094 PMID:15840053 tunica serosa development GOC:TermGenie wall of serous sac development GOC:TermGenie serosa development GOC:TermGenie The process whose specific outcome is the progression of a visceral peritoneum over time, from its formation to the mature structure. dph 2015-11-17T19:00:17Z biological_process GO:1904818 visceral peritoneum development GO:1904818 The process whose specific outcome is the progression of a visceral peritoneum over time, from its formation to the mature structure. GOC:TermGenie GOC:dph GO_REF:0000094 PMID:15840053 The process whose specific outcome is the progression of a parietal peritoneum over time, from its formation to the mature structure. dph 2015-11-17T19:00:24Z peritoneal cavity lining development biological_process GO:1904819 parietal peritoneum development GO:1904819 The process whose specific outcome is the progression of a parietal peritoneum over time, from its formation to the mature structure. GOC:TermGenie GOC:dph GO_REF:0000094 PMID:15840053 peritoneal cavity lining development GOC:TermGenie The process whose specific outcome is the progression of a peritoneum over time, from its formation to the mature structure. dph 2015-11-18T17:23:51Z biological_process peritonaeum development GO:1904820 peritoneum development GO:1904820 The process whose specific outcome is the progression of a peritoneum over time, from its formation to the mature structure. GOC:TermGenie GOC:dph GO_REF:0000094 PMID:15840053 peritonaeum development GOC:TermGenie Any process that modulates the frequency, rate or extent of aortic smooth muscle cell differentiation. rph 2015-11-24T10:20:40Z biological_process GO:1904829 regulation of aortic smooth muscle cell differentiation GO:1904829 Any process that modulates the frequency, rate or extent of aortic smooth muscle cell differentiation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:22034194 Any process that stops, prevents or reduces the frequency, rate or extent of aortic smooth muscle cell differentiation. rph 2015-11-24T10:20:47Z down regulation of aortic smooth muscle cell differentiation down-regulation of aortic smooth muscle cell differentiation downregulation of aortic smooth muscle cell differentiation inhibition of aortic smooth muscle cell differentiation biological_process GO:1904830 negative regulation of aortic smooth muscle cell differentiation GO:1904830 Any process that stops, prevents or reduces the frequency, rate or extent of aortic smooth muscle cell differentiation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:22034194 down regulation of aortic smooth muscle cell differentiation GOC:TermGenie down-regulation of aortic smooth muscle cell differentiation GOC:TermGenie downregulation of aortic smooth muscle cell differentiation GOC:TermGenie inhibition of aortic smooth muscle cell differentiation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of aortic smooth muscle cell differentiation. rph 2015-11-24T10:20:54Z up regulation of aortic smooth muscle cell differentiation up-regulation of aortic smooth muscle cell differentiation upregulation of aortic smooth muscle cell differentiation activation of aortic smooth muscle cell differentiation biological_process GO:1904831 positive regulation of aortic smooth muscle cell differentiation GO:1904831 Any process that activates or increases the frequency, rate or extent of aortic smooth muscle cell differentiation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:22034194 up regulation of aortic smooth muscle cell differentiation GOC:TermGenie up-regulation of aortic smooth muscle cell differentiation GOC:TermGenie upregulation of aortic smooth muscle cell differentiation GOC:TermGenie activation of aortic smooth muscle cell differentiation GOC:TermGenie The process whose specific outcome is the progression of a cranial skeletal system over time, from its formation to the mature structure. The cranial skeletal system is the skeletal subdivision of the head, and includes the skull (cranium plus mandible), pharyngeal and/or hyoid apparatus. bf 2016-01-07T13:45:06Z cranial skeleton development craniofacial development osteocranium development biological_process cranium development GO:1904888 cranial skeletal system development GO:1904888 The process whose specific outcome is the progression of a cranial skeletal system over time, from its formation to the mature structure. The cranial skeletal system is the skeletal subdivision of the head, and includes the skull (cranium plus mandible), pharyngeal and/or hyoid apparatus. GOC:PARL GOC:TermGenie GOC:bf GO_REF:0000094 PMID:11262227 cranial skeleton development GOC:TermGenie craniofacial development PMID:11262227 osteocranium development GOC:TermGenie cranium development GOC:TermGenie Any process that modulates the frequency, rate or extent of cell proliferation in midbrain. bf 2016-02-01T13:16:11Z regulation of cell proliferation in mesencephalon biological_process regulation of mesencepahalic cell proliferation GO:1904933 regulation of cell proliferation in midbrain GO:1904933 Any process that modulates the frequency, rate or extent of cell proliferation in midbrain. GOC:PARL GOC:TermGenie GOC:bf GO_REF:0000058 PMID:18953410 PMID:24431302 regulation of cell proliferation in mesencephalon GOC:TermGenie regulation of mesencepahalic cell proliferation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation in midbrain. bf 2016-02-01T13:16:19Z down regulation of cell proliferation in mesencephalon down regulation of cell proliferation in midbrain down-regulation of cell proliferation in mesencephalon down-regulation of cell proliferation in midbrain downregulation of cell proliferation in mesencephalon downregulation of cell proliferation in midbrain negative regulation of cell proliferation in mesencephalon inhibition of cell proliferation in mesencephalon inhibition of cell proliferation in midbrain biological_process down regulation of mesencepahalic cell proliferation down-regulation of mesencepahalic cell proliferation downregulation of mesencepahalic cell proliferation inhibition of mesencepahalic cell proliferation negative regulation of mesencepahalic cell proliferation GO:1904934 negative regulation of cell proliferation in midbrain GO:1904934 Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation in midbrain. GOC:PARL GOC:TermGenie GOC:bf GO_REF:0000058 PMID:18953410 PMID:24431302 down regulation of cell proliferation in mesencephalon GOC:TermGenie down regulation of cell proliferation in midbrain GOC:TermGenie down-regulation of cell proliferation in mesencephalon GOC:TermGenie down-regulation of cell proliferation in midbrain GOC:TermGenie downregulation of cell proliferation in mesencephalon GOC:TermGenie downregulation of cell proliferation in midbrain GOC:TermGenie negative regulation of cell proliferation in mesencephalon GOC:TermGenie inhibition of cell proliferation in mesencephalon GOC:TermGenie inhibition of cell proliferation in midbrain GOC:TermGenie down regulation of mesencepahalic cell proliferation GOC:TermGenie down-regulation of mesencepahalic cell proliferation GOC:TermGenie downregulation of mesencepahalic cell proliferation GOC:TermGenie inhibition of mesencepahalic cell proliferation GOC:TermGenie negative regulation of mesencepahalic cell proliferation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of cell proliferation in midbrain. bf 2016-02-01T13:16:27Z positive regulation of cell proliferation in mesencephalon up regulation of cell proliferation in mesencephalon up regulation of cell proliferation in midbrain up-regulation of cell proliferation in mesencephalon up-regulation of cell proliferation in midbrain upregulation of cell proliferation in mesencephalon upregulation of cell proliferation in midbrain activation of cell proliferation in mesencephalon activation of cell proliferation in midbrain biological_process activation of mesencepahalic cell proliferation positive regulation of mesencepahalic cell proliferation up regulation of mesencepahalic cell proliferation up-regulation of mesencepahalic cell proliferation upregulation of mesencepahalic cell proliferation GO:1904935 positive regulation of cell proliferation in midbrain GO:1904935 Any process that activates or increases the frequency, rate or extent of cell proliferation in midbrain. GOC:PARL GOC:TermGenie GOC:bf GO_REF:0000058 PMID:24431302 positive regulation of cell proliferation in mesencephalon GOC:TermGenie up regulation of cell proliferation in mesencephalon GOC:TermGenie up regulation of cell proliferation in midbrain GOC:TermGenie up-regulation of cell proliferation in mesencephalon GOC:TermGenie up-regulation of cell proliferation in midbrain GOC:TermGenie upregulation of cell proliferation in mesencephalon GOC:TermGenie upregulation of cell proliferation in midbrain GOC:TermGenie activation of cell proliferation in mesencephalon GOC:TermGenie activation of cell proliferation in midbrain GOC:TermGenie activation of mesencepahalic cell proliferation GOC:TermGenie positive regulation of mesencepahalic cell proliferation GOC:TermGenie up regulation of mesencepahalic cell proliferation GOC:TermGenie up-regulation of mesencepahalic cell proliferation GOC:TermGenie upregulation of mesencepahalic cell proliferation GOC:TermGenie The orderly movement of an interneuron from one site to another. ah 2016-02-01T14:04:32Z inter neuron migration inter-neuron migration biological_process GO:1904936 interneuron migration GO:1904936 The orderly movement of an interneuron from one site to another. GOC:TermGenie GOC:ah GO_REF:0000091 PMID:18622031 inter neuron migration GOC:ah inter-neuron migration GOC:ah The orderly movement of a sensory neuron from one site to another. ah 2016-02-01T14:15:50Z biological_process GO:1904937 sensory neuron migration GO:1904937 The orderly movement of a sensory neuron from one site to another. GOC:TermGenie GOC:ah GO_REF:0000091 PMID:18622031 Any process that modulates the frequency, rate or extent of cardiac ventricle formation. bc 2016-02-02T16:37:16Z biological_process GO:1904942 regulation of cardiac ventricle formation GO:1904942 Any process that modulates the frequency, rate or extent of cardiac ventricle formation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:bc GO_REF:0000058 PMID:23575307 Any process that stops, prevents or reduces the frequency, rate or extent of cardiac ventricle formation. bc 2016-02-02T16:37:24Z down regulation of cardiac ventricle formation down-regulation of cardiac ventricle formation downregulation of cardiac ventricle formation inhibition of cardiac ventricle formation biological_process GO:1904943 negative regulation of cardiac ventricle formation GO:1904943 Any process that stops, prevents or reduces the frequency, rate or extent of cardiac ventricle formation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:bc GO_REF:0000058 PMID:23575307 down regulation of cardiac ventricle formation GOC:TermGenie down-regulation of cardiac ventricle formation GOC:TermGenie downregulation of cardiac ventricle formation GOC:TermGenie inhibition of cardiac ventricle formation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of cardiac ventricle formation. bc 2016-02-02T16:37:31Z up regulation of cardiac ventricle formation up-regulation of cardiac ventricle formation upregulation of cardiac ventricle formation activation of cardiac ventricle formation biological_process GO:1904944 positive regulation of cardiac ventricle formation GO:1904944 Any process that activates or increases the frequency, rate or extent of cardiac ventricle formation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:bc GO_REF:0000058 PMID:23575307 up regulation of cardiac ventricle formation GOC:TermGenie up-regulation of cardiac ventricle formation GOC:TermGenie upregulation of cardiac ventricle formation GOC:TermGenie activation of cardiac ventricle formation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of establishment of protein localization. mec 2016-02-05T09:59:24Z down regulation of establishment of protein localisation down regulation of establishment of protein localization down regulation of protein positioning down regulation of protein recruitment down-regulation of establishment of protein localisation down-regulation of establishment of protein localization down-regulation of protein positioning down-regulation of protein recruitment downregulation of establishment of protein localisation downregulation of establishment of protein localization downregulation of protein positioning downregulation of protein recruitment negative regulation of establishment of protein localisation negative regulation of protein positioning negative regulation of protein recruitment inhibition of establishment of protein localisation inhibition of establishment of protein localization inhibition of protein positioning inhibition of protein recruitment biological_process GO:1904950 negative regulation of establishment of protein localization GO:1904950 Any process that stops, prevents or reduces the frequency, rate or extent of establishment of protein localization. GOC:TermGenie GO_REF:0000058 PMID:22761445 down regulation of establishment of protein localisation GOC:TermGenie down regulation of establishment of protein localization GOC:TermGenie down regulation of protein positioning GOC:TermGenie down regulation of protein recruitment GOC:TermGenie down-regulation of establishment of protein localisation GOC:TermGenie down-regulation of establishment of protein localization GOC:TermGenie down-regulation of protein positioning GOC:TermGenie down-regulation of protein recruitment GOC:TermGenie downregulation of establishment of protein localisation GOC:TermGenie downregulation of establishment of protein localization GOC:TermGenie downregulation of protein positioning GOC:TermGenie downregulation of protein recruitment GOC:TermGenie negative regulation of establishment of protein localisation GOC:TermGenie negative regulation of protein positioning GOC:TermGenie negative regulation of protein recruitment GOC:TermGenie inhibition of establishment of protein localisation GOC:TermGenie inhibition of establishment of protein localization GOC:TermGenie inhibition of protein positioning GOC:TermGenie inhibition of protein recruitment GOC:TermGenie Any process that activates or increases the frequency, rate or extent of establishment of protein localization. mec 2016-02-05T09:59:32Z positive regulation of establishment of protein localisation positive regulation of protein positioning positive regulation of protein recruitment up regulation of establishment of protein localisation up regulation of establishment of protein localization up regulation of protein positioning up regulation of protein recruitment up-regulation of establishment of protein localisation up-regulation of establishment of protein localization up-regulation of protein positioning up-regulation of protein recruitment upregulation of establishment of protein localisation upregulation of establishment of protein localization upregulation of protein positioning upregulation of protein recruitment activation of establishment of protein localisation activation of establishment of protein localization activation of protein positioning activation of protein recruitment biological_process GO:1904951 positive regulation of establishment of protein localization GO:1904951 Any process that activates or increases the frequency, rate or extent of establishment of protein localization. GOC:TermGenie GO_REF:0000058 PMID:22761445 positive regulation of establishment of protein localisation GOC:TermGenie positive regulation of protein positioning GOC:TermGenie positive regulation of protein recruitment GOC:TermGenie up regulation of establishment of protein localisation GOC:TermGenie up regulation of establishment of protein localization GOC:TermGenie up regulation of protein positioning GOC:TermGenie up regulation of protein recruitment GOC:TermGenie up-regulation of establishment of protein localisation GOC:TermGenie up-regulation of establishment of protein localization GOC:TermGenie up-regulation of protein positioning GOC:TermGenie up-regulation of protein recruitment GOC:TermGenie upregulation of establishment of protein localisation GOC:TermGenie upregulation of establishment of protein localization GOC:TermGenie upregulation of protein positioning GOC:TermGenie upregulation of protein recruitment GOC:TermGenie activation of establishment of protein localisation GOC:TermGenie activation of establishment of protein localization GOC:TermGenie activation of protein positioning GOC:TermGenie activation of protein recruitment GOC:TermGenie Any process that modulates the frequency, rate or extent of endothelial cell activation. bc 2016-02-29T16:16:09Z biological_process GO:1904987 regulation of endothelial cell activation GO:1904987 Any process that modulates the frequency, rate or extent of endothelial cell activation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:bc GO_REF:0000058 PMID:24255059 Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell activation. bc 2016-02-29T16:16:18Z down regulation of endothelial cell activation down-regulation of endothelial cell activation downregulation of endothelial cell activation inhibition of endothelial cell activation biological_process GO:1904988 negative regulation of endothelial cell activation GO:1904988 Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell activation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:bc GO_REF:0000058 PMID:24255059 down regulation of endothelial cell activation GOC:TermGenie down-regulation of endothelial cell activation GOC:TermGenie downregulation of endothelial cell activation GOC:TermGenie inhibition of endothelial cell activation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of endothelial cell activation. bc 2016-02-29T16:16:25Z up regulation of endothelial cell activation up-regulation of endothelial cell activation upregulation of endothelial cell activation activation of endothelial cell activation biological_process GO:1904989 positive regulation of endothelial cell activation GO:1904989 Any process that activates or increases the frequency, rate or extent of endothelial cell activation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:bc GO_REF:0000058 PMID:24255059 up regulation of endothelial cell activation GOC:TermGenie up-regulation of endothelial cell activation GOC:TermGenie upregulation of endothelial cell activation GOC:TermGenie activation of endothelial cell activation GOC:TermGenie Any process that modulates the frequency, rate or extent of membrane lipid metabolic process. tb 2016-03-08T20:41:32Z regulation of membrane lipid metabolism biological_process GO:1905038 regulation of membrane lipid metabolic process GO:1905038 Any process that modulates the frequency, rate or extent of membrane lipid metabolic process. GOC:TermGenie GO_REF:0000058 PMID:25954280 regulation of membrane lipid metabolism GOC:TermGenie The process in which carboxylic acid is transported across a membrane. vw 2016-03-09T15:33:53Z biological_process GO:1905039 carboxylic acid transmembrane transport GO:1905039 The process in which carboxylic acid is transported across a membrane. GOC:TermGenie GO_REF:0000069 PMID:10869563 Any process that modulates the frequency, rate or extent of vascular smooth muscle cell differentiation. rph 2016-03-21T11:14:53Z regulation of VSMC differentiation regulation of vascular smooth muscle cell differentiation biological_process GO:1905063 regulation of vascular associated smooth muscle cell differentiation GO:1905063 Any process that modulates the frequency, rate or extent of vascular smooth muscle cell differentiation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:19088079 regulation of VSMC differentiation GOC:TermGenie regulation of vascular smooth muscle cell differentiation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell differentiation. rph 2016-03-21T11:15:03Z down regulation of VSMC differentiation down regulation of vascular associated smooth muscle cell differentiation down regulation of vascular smooth muscle cell differentiation down-regulation of VSMC differentiation down-regulation of vascular associated smooth muscle cell differentiation down-regulation of vascular smooth muscle cell differentiation downregulation of VSMC differentiation downregulation of vascular associated smooth muscle cell differentiation downregulation of vascular smooth muscle cell differentiation negative regulation of VSMC differentiation negative regulation of vascular smooth muscle cell differentiation inhibition of VSMC differentiation inhibition of vascular associated smooth muscle cell differentiation inhibition of vascular smooth muscle cell differentiation biological_process GO:1905064 negative regulation of vascular associated smooth muscle cell differentiation GO:1905064 Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell differentiation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:19088079 down regulation of VSMC differentiation GOC:TermGenie down regulation of vascular associated smooth muscle cell differentiation GOC:TermGenie down regulation of vascular smooth muscle cell differentiation GOC:TermGenie down-regulation of VSMC differentiation GOC:TermGenie down-regulation of vascular associated smooth muscle cell differentiation GOC:TermGenie down-regulation of vascular smooth muscle cell differentiation GOC:TermGenie downregulation of VSMC differentiation GOC:TermGenie downregulation of vascular associated smooth muscle cell differentiation GOC:TermGenie downregulation of vascular smooth muscle cell differentiation GOC:TermGenie negative regulation of VSMC differentiation GOC:TermGenie negative regulation of vascular smooth muscle cell differentiation GOC:TermGenie inhibition of VSMC differentiation GOC:TermGenie inhibition of vascular associated smooth muscle cell differentiation GOC:TermGenie inhibition of vascular smooth muscle cell differentiation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell differentiation. rph 2016-03-21T11:15:13Z positive regulation of VSMC differentiation positive regulation of vascular smooth muscle cell differentiation up regulation of VSMC differentiation up regulation of vascular associated smooth muscle cell differentiation up regulation of vascular smooth muscle cell differentiation up-regulation of VSMC differentiation up-regulation of vascular associated smooth muscle cell differentiation up-regulation of vascular smooth muscle cell differentiation upregulation of VSMC differentiation upregulation of vascular associated smooth muscle cell differentiation upregulation of vascular smooth muscle cell differentiation activation of VSMC differentiation activation of vascular associated smooth muscle cell differentiation activation of vascular smooth muscle cell differentiation biological_process GO:1905065 positive regulation of vascular associated smooth muscle cell differentiation GO:1905065 Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell differentiation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:19088079 positive regulation of VSMC differentiation GOC:TermGenie positive regulation of vascular smooth muscle cell differentiation GOC:TermGenie up regulation of VSMC differentiation GOC:TermGenie up regulation of vascular associated smooth muscle cell differentiation GOC:TermGenie up regulation of vascular smooth muscle cell differentiation GOC:TermGenie up-regulation of VSMC differentiation GOC:TermGenie up-regulation of vascular associated smooth muscle cell differentiation GOC:TermGenie up-regulation of vascular smooth muscle cell differentiation GOC:TermGenie upregulation of VSMC differentiation GOC:TermGenie upregulation of vascular associated smooth muscle cell differentiation GOC:TermGenie upregulation of vascular smooth muscle cell differentiation GOC:TermGenie activation of VSMC differentiation GOC:TermGenie activation of vascular associated smooth muscle cell differentiation GOC:TermGenie activation of vascular smooth muscle cell differentiation GOC:TermGenie Any process that modulates the frequency, rate or extent of axo-dendritic protein transport. sl 2016-04-11T20:38:31Z regulation of axonal protein transport biological_process GO:1905126 regulation of axo-dendritic protein transport GO:1905126 Any process that modulates the frequency, rate or extent of axo-dendritic protein transport. GOC:TermGenie GO_REF:0000058 PMID:20694152 regulation of axonal protein transport GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of axo-dendritic protein transport. sl 2016-04-11T20:38:40Z down regulation of axo-dendritic protein transport down-regulation of axo-dendritic protein transport downregulation of axo-dendritic protein transport down regulation of axonal protein transport down-regulation of axonal protein transport downregulation of axonal protein transport inhibition of axo-dendritic protein transport inhibition of axonal protein transport negative regulation of axonal protein transport biological_process GO:1905127 negative regulation of axo-dendritic protein transport GO:1905127 Any process that stops, prevents or reduces the frequency, rate or extent of axo-dendritic protein transport. GOC:TermGenie GO_REF:0000058 PMID:20694152 down regulation of axo-dendritic protein transport GOC:TermGenie down-regulation of axo-dendritic protein transport GOC:TermGenie downregulation of axo-dendritic protein transport GOC:TermGenie down regulation of axonal protein transport GOC:TermGenie down-regulation of axonal protein transport GOC:TermGenie downregulation of axonal protein transport GOC:TermGenie inhibition of axo-dendritic protein transport GOC:TermGenie inhibition of axonal protein transport GOC:TermGenie negative regulation of axonal protein transport GOC:TermGenie Any process that activates or increases the frequency, rate or extent of axo-dendritic protein transport. sl 2016-04-11T20:38:48Z up regulation of axo-dendritic protein transport up-regulation of axo-dendritic protein transport upregulation of axo-dendritic protein transport activation of axo-dendritic protein transport activation of axonal protein transport positive regulation of axonal protein transport up regulation of axonal protein transport up-regulation of axonal protein transport upregulation of axonal protein transport biological_process GO:1905128 positive regulation of axo-dendritic protein transport GO:1905128 Any process that activates or increases the frequency, rate or extent of axo-dendritic protein transport. GOC:TermGenie GO_REF:0000058 PMID:20694152 up regulation of axo-dendritic protein transport GOC:TermGenie up-regulation of axo-dendritic protein transport GOC:TermGenie upregulation of axo-dendritic protein transport GOC:TermGenie activation of axo-dendritic protein transport GOC:TermGenie activation of axonal protein transport GOC:TermGenie positive regulation of axonal protein transport GOC:TermGenie up regulation of axonal protein transport GOC:TermGenie up-regulation of axonal protein transport GOC:TermGenie upregulation of axonal protein transport GOC:TermGenie The process that gives rise to the apical ectodermal ridge. This process pertains to the initial formation of a structure from unspecified parts. dph 2016-04-13T11:46:40Z apical epidermal ridge formation biological_process AER formation crista ectodermalis apicalis formation GO:1905139 apical ectodermal ridge formation GO:1905139 The process that gives rise to the apical ectodermal ridge. This process pertains to the initial formation of a structure from unspecified parts. GOC:TermGenie GO_REF:0000081 PMID:18359901 PMID:9323126 PMID:9596583 apical epidermal ridge formation GOC:TermGenie AER formation GOC:TermGenie crista ectodermalis apicalis formation GOC:TermGenie Any process that modulates the frequency, rate or extent of apical ectodermal ridge formation. dph 2016-04-13T12:16:40Z regulation of apical epidermal ridge formation biological_process regulation of AER formation regulation of crista ectodermalis apicalis formation GO:1905140 regulation of apical ectodermal ridge formation GO:1905140 Any process that modulates the frequency, rate or extent of apical ectodermal ridge formation. GOC:TermGenie GO_REF:0000058 PMID:18359901 regulation of apical epidermal ridge formation GOC:TermGenie regulation of AER formation GOC:TermGenie regulation of crista ectodermalis apicalis formation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of apical ectodermal ridge formation. dph 2016-04-13T12:16:48Z down regulation of apical ectodermal ridge formation down regulation of apical epidermal ridge formation down-regulation of apical ectodermal ridge formation down-regulation of apical epidermal ridge formation downregulation of apical ectodermal ridge formation downregulation of apical epidermal ridge formation negative regulation of apical epidermal ridge formation inhibition of apical ectodermal ridge formation inhibition of apical epidermal ridge formation biological_process down regulation of AER formation down regulation of crista ectodermalis apicalis formation down-regulation of AER formation down-regulation of crista ectodermalis apicalis formation downregulation of AER formation downregulation of crista ectodermalis apicalis formation inhibition of AER formation inhibition of crista ectodermalis apicalis formation negative regulation of AER formation negative regulation of crista ectodermalis apicalis formation GO:1905141 negative regulation of apical ectodermal ridge formation GO:1905141 Any process that stops, prevents or reduces the frequency, rate or extent of apical ectodermal ridge formation. GOC:TermGenie GO_REF:0000058 PMID:18359901 down regulation of apical ectodermal ridge formation GOC:TermGenie down regulation of apical epidermal ridge formation GOC:TermGenie down-regulation of apical ectodermal ridge formation GOC:TermGenie down-regulation of apical epidermal ridge formation GOC:TermGenie downregulation of apical ectodermal ridge formation GOC:TermGenie downregulation of apical epidermal ridge formation GOC:TermGenie negative regulation of apical epidermal ridge formation GOC:TermGenie inhibition of apical ectodermal ridge formation GOC:TermGenie inhibition of apical epidermal ridge formation GOC:TermGenie down regulation of AER formation GOC:TermGenie down regulation of crista ectodermalis apicalis formation GOC:TermGenie down-regulation of AER formation GOC:TermGenie down-regulation of crista ectodermalis apicalis formation GOC:TermGenie downregulation of AER formation GOC:TermGenie downregulation of crista ectodermalis apicalis formation GOC:TermGenie inhibition of AER formation GOC:TermGenie inhibition of crista ectodermalis apicalis formation GOC:TermGenie negative regulation of AER formation GOC:TermGenie negative regulation of crista ectodermalis apicalis formation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of apical ectodermal ridge formation. dph 2016-04-13T12:16:57Z positive regulation of apical epidermal ridge formation up regulation of apical ectodermal ridge formation up regulation of apical epidermal ridge formation up-regulation of apical ectodermal ridge formation up-regulation of apical epidermal ridge formation upregulation of apical ectodermal ridge formation upregulation of apical epidermal ridge formation biological_process activation of AER formation positive regulation of AER formation positive regulation of crista ectodermalis apicalis formation up regulation of AER formation up regulation of crista ectodermalis apicalis formation up-regulation of AER formation up-regulation of crista ectodermalis apicalis formation upregulation of AER formation upregulation of crista ectodermalis apicalis formation GO:1905142 positive regulation of apical ectodermal ridge formation GO:1905142 Any process that activates or increases the frequency, rate or extent of apical ectodermal ridge formation. GOC:TermGenie GO_REF:0000058 PMID:18359901 positive regulation of apical epidermal ridge formation GOC:TermGenie up regulation of apical ectodermal ridge formation GOC:TermGenie up regulation of apical epidermal ridge formation GOC:TermGenie up-regulation of apical ectodermal ridge formation GOC:TermGenie up-regulation of apical epidermal ridge formation GOC:TermGenie upregulation of apical ectodermal ridge formation GOC:TermGenie upregulation of apical epidermal ridge formation GOC:TermGenie activation of AER formation GOC:TermGenie positive regulation of AER formation GOC:TermGenie positive regulation of crista ectodermalis apicalis formation GOC:TermGenie up regulation of AER formation GOC:TermGenie up regulation of crista ectodermalis apicalis formation GOC:TermGenie up-regulation of AER formation GOC:TermGenie up-regulation of crista ectodermalis apicalis formation GOC:TermGenie upregulation of AER formation GOC:TermGenie upregulation of crista ectodermalis apicalis formation GOC:TermGenie Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetylcholine stimulus. dos 2016-04-14T08:54:49Z biological_process GO:1905144 response to acetylcholine GO:1905144 Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetylcholine stimulus. GOC:TermGenie GO_REF:0000071 PMID:21238497 Any process that modulates the frequency, rate or extent of smooth muscle hypertrophy. bc 2016-04-15T12:47:07Z biological_process GO:1905147 regulation of smooth muscle hypertrophy GO:1905147 Any process that modulates the frequency, rate or extent of smooth muscle hypertrophy. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:bc GO_REF:0000058 PMID:22161164 Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle hypertrophy. bc 2016-04-15T12:47:16Z down regulation of smooth muscle hypertrophy down-regulation of smooth muscle hypertrophy downregulation of smooth muscle hypertrophy inhibition of smooth muscle hypertrophy biological_process GO:1905148 negative regulation of smooth muscle hypertrophy GO:1905148 Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle hypertrophy. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:bc GO_REF:0000058 PMID:22161164 down regulation of smooth muscle hypertrophy GOC:TermGenie down-regulation of smooth muscle hypertrophy GOC:TermGenie downregulation of smooth muscle hypertrophy GOC:TermGenie inhibition of smooth muscle hypertrophy GOC:TermGenie Any process that activates or increases the frequency, rate or extent of smooth muscle hypertrophy. bc 2016-04-15T12:47:24Z up regulation of smooth muscle hypertrophy up-regulation of smooth muscle hypertrophy upregulation of smooth muscle hypertrophy activation of smooth muscle hypertrophy biological_process GO:1905149 positive regulation of smooth muscle hypertrophy GO:1905149 Any process that activates or increases the frequency, rate or extent of smooth muscle hypertrophy. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:bc GO_REF:0000058 PMID:22161164 up regulation of smooth muscle hypertrophy GOC:TermGenie up-regulation of smooth muscle hypertrophy GOC:TermGenie upregulation of smooth muscle hypertrophy GOC:TermGenie activation of smooth muscle hypertrophy GOC:TermGenie Any process that modulates the frequency, rate or extent of cardiocyte differentiation. bc 2016-06-02T07:20:01Z regulation of cardiac cell differentiation regulation of heart cell differentiation biological_process GO:1905207 regulation of cardiocyte differentiation GO:1905207 Any process that modulates the frequency, rate or extent of cardiocyte differentiation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:bc GO_REF:0000058 PMID:23069713 regulation of cardiac cell differentiation GOC:TermGenie regulation of heart cell differentiation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of cardiocyte differentiation. bc 2016-06-02T07:20:09Z down regulation of cardiac cell differentiation down regulation of cardiocyte differentiation down regulation of heart cell differentiation down-regulation of cardiac cell differentiation down-regulation of cardiocyte differentiation down-regulation of heart cell differentiation downregulation of cardiac cell differentiation downregulation of cardiocyte differentiation downregulation of heart cell differentiation negative regulation of cardiac cell differentiation negative regulation of heart cell differentiation inhibition of cardiac cell differentiation inhibition of cardiocyte differentiation inhibition of heart cell differentiation biological_process GO:1905208 negative regulation of cardiocyte differentiation GO:1905208 Any process that stops, prevents or reduces the frequency, rate or extent of cardiocyte differentiation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:bc GO_REF:0000058 PMID:23069713 down regulation of cardiac cell differentiation GOC:TermGenie down regulation of cardiocyte differentiation GOC:TermGenie down regulation of heart cell differentiation GOC:TermGenie down-regulation of cardiac cell differentiation GOC:TermGenie down-regulation of cardiocyte differentiation GOC:TermGenie down-regulation of heart cell differentiation GOC:TermGenie downregulation of cardiac cell differentiation GOC:TermGenie downregulation of cardiocyte differentiation GOC:TermGenie downregulation of heart cell differentiation GOC:TermGenie negative regulation of cardiac cell differentiation GOC:TermGenie negative regulation of heart cell differentiation GOC:TermGenie inhibition of cardiac cell differentiation GOC:TermGenie inhibition of cardiocyte differentiation GOC:TermGenie inhibition of heart cell differentiation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of cardiocyte differentiation. bc 2016-06-02T07:20:16Z positive regulation of cardiac cell differentiation positive regulation of heart cell differentiation up regulation of cardiac cell differentiation up regulation of cardiocyte differentiation up regulation of heart cell differentiation up-regulation of cardiac cell differentiation up-regulation of cardiocyte differentiation up-regulation of heart cell differentiation upregulation of cardiac cell differentiation upregulation of cardiocyte differentiation upregulation of heart cell differentiation activation of cardiac cell differentiation activation of cardiocyte differentiation activation of heart cell differentiation biological_process GO:1905209 positive regulation of cardiocyte differentiation GO:1905209 Any process that activates or increases the frequency, rate or extent of cardiocyte differentiation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:bc GO_REF:0000058 PMID:23069713 positive regulation of cardiac cell differentiation GOC:TermGenie positive regulation of heart cell differentiation GOC:TermGenie up regulation of cardiac cell differentiation GOC:TermGenie up regulation of cardiocyte differentiation GOC:TermGenie up regulation of heart cell differentiation GOC:TermGenie up-regulation of cardiac cell differentiation GOC:TermGenie up-regulation of cardiocyte differentiation GOC:TermGenie up-regulation of heart cell differentiation GOC:TermGenie upregulation of cardiac cell differentiation GOC:TermGenie upregulation of cardiocyte differentiation GOC:TermGenie upregulation of heart cell differentiation GOC:TermGenie activation of cardiac cell differentiation GOC:TermGenie activation of cardiocyte differentiation GOC:TermGenie activation of heart cell differentiation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of mitotic chromosome condensation. vw 2016-06-03T08:41:08Z biological_process GO:1905213 negative regulation of mitotic chromosome condensation GO:1905213 Any process that stops, prevents or reduces the frequency, rate or extent of mitotic chromosome condensation. GOC:TermGenie GO_REF:0000058 PMID:23219725 The developmental process by which an epicardium is generated and organized. rl 2016-06-07T10:02:32Z heart epicardium morphogenesis visceral serous pericardium of heart morphogenesis visceral serous pericardium proper morphogenesis biological_process pericardium visceral mesothelium morphogenesis GO:1905223 epicardium morphogenesis GO:1905223 The developmental process by which an epicardium is generated and organized. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000083 PMID:18718461 heart epicardium morphogenesis GOC:TermGenie visceral serous pericardium of heart morphogenesis GOC:TermGenie visceral serous pericardium proper morphogenesis GOC:TermGenie pericardium visceral mesothelium morphogenesis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of chromatin organization. pr 2016-06-15T20:14:47Z GO:0045798 GO:1903309 down regulation of chromatin organisation down regulation of chromatin organization down regulation of establishment or maintenance of chromatin architecture down-regulation of chromatin organisation down-regulation of chromatin organization down-regulation of establishment or maintenance of chromatin architecture downregulation of chromatin organisation downregulation of chromatin organization downregulation of establishment or maintenance of chromatin architecture negative regulation of chromatin assembly/disassembly negative regulation of chromatin organisation negative regulation of establishment or maintenance of chromatin architecture inhibition of chromatin assembly or disassembly inhibition of chromatin organisation inhibition of chromatin organization inhibition of establishment or maintenance of chromatin architecture biological_process down regulation of chromatin assembly or disassembly down-regulation of chromatin assembly or disassembly downregulation of chromatin assembly or disassembly negative regulation of chromatin assembly or disassembly negative regulation of chromatin modification GO:1905268 negative regulation of chromatin organization GO:1905268 Any process that stops, prevents or reduces the frequency, rate or extent of chromatin organization. GOC:TermGenie GOC:pr GOC:vw GO_REF:0000058 PMID:654321 down regulation of chromatin organisation GOC:TermGenie down regulation of chromatin organization GOC:TermGenie down regulation of establishment or maintenance of chromatin architecture GOC:TermGenie down-regulation of chromatin organisation GOC:TermGenie down-regulation of chromatin organization GOC:TermGenie down-regulation of establishment or maintenance of chromatin architecture GOC:TermGenie downregulation of chromatin organisation GOC:TermGenie downregulation of chromatin organization GOC:TermGenie downregulation of establishment or maintenance of chromatin architecture GOC:TermGenie negative regulation of chromatin organisation GOC:TermGenie negative regulation of establishment or maintenance of chromatin architecture GOC:TermGenie inhibition of chromatin organisation GOC:TermGenie inhibition of chromatin organization GOC:TermGenie inhibition of establishment or maintenance of chromatin architecture GOC:TermGenie Any process that activates or increases the frequency, rate or extent of chromatin organization. pr 2016-06-15T20:14:56Z GO:0045799 GO:1903310 positive regulation of chromatin organisation positive regulation of establishment or maintenance of chromatin architecture up regulation of chromatin organisation up regulation of chromatin organization up regulation of establishment or maintenance of chromatin architecture up-regulation of chromatin organisation up-regulation of chromatin organization up-regulation of establishment or maintenance of chromatin architecture upregulation of chromatin assembly or disassembly upregulation of chromatin organisation upregulation of chromatin organization upregulation of establishment or maintenance of chromatin architecture activation of chromatin assembly or disassembly activation of chromatin organisation activation of chromatin organization activation of establishment or maintenance of chromatin architecture stimulation of chromatin assembly or disassembly biological_process positive regulation of chromatin assembly or disassembly positive regulation of chromatin assembly/disassembly positive regulation of chromatin modification up regulation of chromatin assembly or disassembly up-regulation of chromatin assembly or disassembly GO:1905269 positive regulation of chromatin organization GO:1905269 Any process that activates or increases the frequency, rate or extent of chromatin organization. GOC:TermGenie GOC:pr GOC:vw GO_REF:0000058 PMID:654321 positive regulation of chromatin organisation GOC:TermGenie positive regulation of establishment or maintenance of chromatin architecture GOC:TermGenie up regulation of chromatin organisation GOC:TermGenie up regulation of chromatin organization GOC:TermGenie up regulation of establishment or maintenance of chromatin architecture GOC:TermGenie up-regulation of chromatin organisation GOC:TermGenie up-regulation of chromatin organization GOC:TermGenie up-regulation of establishment or maintenance of chromatin architecture GOC:TermGenie upregulation of chromatin organisation GOC:TermGenie upregulation of chromatin organization GOC:TermGenie upregulation of establishment or maintenance of chromatin architecture GOC:TermGenie activation of chromatin organisation GOC:TermGenie activation of chromatin organization GOC:TermGenie activation of establishment or maintenance of chromatin architecture GOC:TermGenie Any process that modulates the frequency, rate or extent of epithelial tube formation. bhm 2016-06-20T09:35:41Z biological_process GO:1905276 An example of this is MMRN2 in human (Q9H8L6) in PMID:25745997 (inferred from direct assay). regulation of epithelial tube formation GO:1905276 Any process that modulates the frequency, rate or extent of epithelial tube formation. GOC:TermGenie GOC:bhm GO_REF:0000058 PMID:25745997 Any process that stops, prevents or reduces the frequency, rate or extent of epithelial tube formation. bhm 2016-06-20T09:35:49Z down regulation of epithelial tube formation down-regulation of epithelial tube formation downregulation of epithelial tube formation inhibition of epithelial tube formation biological_process GO:1905277 An example of this is MMRN2 in human (Q9H8L6) in PMID:25745997 (inferred from direct assay). negative regulation of epithelial tube formation GO:1905277 Any process that stops, prevents or reduces the frequency, rate or extent of epithelial tube formation. GOC:TermGenie GOC:bhm GO_REF:0000058 PMID:25745997 down regulation of epithelial tube formation GOC:TermGenie down-regulation of epithelial tube formation GOC:TermGenie downregulation of epithelial tube formation GOC:TermGenie inhibition of epithelial tube formation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of epithelial tube formation. bhm 2016-06-20T09:35:57Z up regulation of epithelial tube formation up-regulation of epithelial tube formation upregulation of epithelial tube formation activation of epithelial tube formation biological_process GO:1905278 An example of this is MMRN2 in human (Q9H8L6) in PMID:25745997 (inferred from direct assay). positive regulation of epithelial tube formation GO:1905278 Any process that activates or increases the frequency, rate or extent of epithelial tube formation. GOC:TermGenie GOC:bhm GO_REF:0000058 PMID:25745997 up regulation of epithelial tube formation GOC:TermGenie up-regulation of epithelial tube formation GOC:TermGenie upregulation of epithelial tube formation GOC:TermGenie activation of epithelial tube formation GOC:TermGenie Any apoptotic process in a vascular associated smooth muscle cell. rph 2016-06-23T13:24:20Z VSMC apoptotic process vascular smooth muscle cell apoptotic process VSMC apoptosis vascular associated smooth muscle cell apoptosis vascular smooth muscle cell apoptosis biological_process GO:1905288 vascular associated smooth muscle cell apoptotic process GO:1905288 Any apoptotic process in a vascular associated smooth muscle cell. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000085 PMID:26493107 VSMC apoptotic process GOC:TermGenie vascular smooth muscle cell apoptotic process GOC:TermGenie VSMC apoptosis GOC:TermGenie vascular associated smooth muscle cell apoptosis GOC:TermGenie vascular smooth muscle cell apoptosis GOC:TermGenie Any process that modulates the frequency, rate or extent of neural crest cell differentiation. rl 2016-06-28T15:02:01Z biological_process GO:1905292 regulation of neural crest cell differentiation GO:1905292 Any process that modulates the frequency, rate or extent of neural crest cell differentiation. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:15073157 Any process that stops, prevents or reduces the frequency, rate or extent of neural crest cell differentiation. rl 2016-06-28T15:02:09Z down regulation of neural crest cell differentiation down-regulation of neural crest cell differentiation downregulation of neural crest cell differentiation inhibition of neural crest cell differentiation biological_process GO:1905293 negative regulation of neural crest cell differentiation GO:1905293 Any process that stops, prevents or reduces the frequency, rate or extent of neural crest cell differentiation. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:15073157 down regulation of neural crest cell differentiation GOC:TermGenie down-regulation of neural crest cell differentiation GOC:TermGenie downregulation of neural crest cell differentiation GOC:TermGenie inhibition of neural crest cell differentiation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of neural crest cell differentiation. rl 2016-06-28T15:02:16Z up regulation of neural crest cell differentiation up-regulation of neural crest cell differentiation upregulation of neural crest cell differentiation activation of neural crest cell differentiation biological_process GO:1905294 positive regulation of neural crest cell differentiation GO:1905294 Any process that activates or increases the frequency, rate or extent of neural crest cell differentiation. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:15073157 up regulation of neural crest cell differentiation GOC:TermGenie up-regulation of neural crest cell differentiation GOC:TermGenie upregulation of neural crest cell differentiation GOC:TermGenie activation of neural crest cell differentiation GOC:TermGenie Any process that modulates the frequency, rate or extent of cardiac myofibril assembly. rl 2016-07-06T10:01:49Z regulation of cardiac myofibril development regulation of cardiac myofibril morphogenesis biological_process regulation of heart myofibril assembly GO:1905304 regulation of cardiac myofibril assembly GO:1905304 Any process that modulates the frequency, rate or extent of cardiac myofibril assembly. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:16151019 regulation of cardiac myofibril development GOC:TermGenie regulation of cardiac myofibril morphogenesis GOC:TermGenie regulation of heart myofibril assembly GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of cardiac myofibril assembly. rl 2016-07-06T10:01:58Z down regulation of cardiac myofibril assembly down regulation of cardiac myofibril development down regulation of cardiac myofibril morphogenesis down-regulation of cardiac myofibril assembly down-regulation of cardiac myofibril development down-regulation of cardiac myofibril morphogenesis downregulation of cardiac myofibril assembly downregulation of cardiac myofibril development downregulation of cardiac myofibril morphogenesis negative regulation of cardiac myofibril development negative regulation of cardiac myofibril morphogenesis inhibition of cardiac myofibril assembly inhibition of cardiac myofibril development inhibition of cardiac myofibril morphogenesis biological_process down regulation of heart myofibril assembly down-regulation of heart myofibril assembly downregulation of heart myofibril assembly inhibition of heart myofibril assembly negative regulation of heart myofibril assembly GO:1905305 negative regulation of cardiac myofibril assembly GO:1905305 Any process that stops, prevents or reduces the frequency, rate or extent of cardiac myofibril assembly. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:16151019 down regulation of cardiac myofibril assembly GOC:TermGenie down regulation of cardiac myofibril development GOC:TermGenie down regulation of cardiac myofibril morphogenesis GOC:TermGenie down-regulation of cardiac myofibril assembly GOC:TermGenie down-regulation of cardiac myofibril development GOC:TermGenie down-regulation of cardiac myofibril morphogenesis GOC:TermGenie downregulation of cardiac myofibril assembly GOC:TermGenie downregulation of cardiac myofibril development GOC:TermGenie downregulation of cardiac myofibril morphogenesis GOC:TermGenie negative regulation of cardiac myofibril development GOC:TermGenie negative regulation of cardiac myofibril morphogenesis GOC:TermGenie inhibition of cardiac myofibril assembly GOC:TermGenie inhibition of cardiac myofibril development GOC:TermGenie inhibition of cardiac myofibril morphogenesis GOC:TermGenie down regulation of heart myofibril assembly GOC:TermGenie down-regulation of heart myofibril assembly GOC:TermGenie downregulation of heart myofibril assembly GOC:TermGenie inhibition of heart myofibril assembly GOC:TermGenie negative regulation of heart myofibril assembly GOC:TermGenie Any process that activates or increases the frequency, rate or extent of cardiac myofibril assembly. rl 2016-07-06T10:02:07Z positive regulation of cardiac myofibril development positive regulation of cardiac myofibril morphogenesis up regulation of cardiac myofibril assembly up regulation of cardiac myofibril development up regulation of cardiac myofibril morphogenesis up-regulation of cardiac myofibril assembly up-regulation of cardiac myofibril development up-regulation of cardiac myofibril morphogenesis upregulation of cardiac myofibril assembly upregulation of cardiac myofibril development upregulation of cardiac myofibril morphogenesis activation of cardiac myofibril assembly activation of cardiac myofibril development activation of cardiac myofibril morphogenesis biological_process activation of heart myofibril assembly positive regulation of heart myofibril assembly up regulation of heart myofibril assembly up-regulation of heart myofibril assembly upregulation of heart myofibril assembly GO:1905306 positive regulation of cardiac myofibril assembly GO:1905306 Any process that activates or increases the frequency, rate or extent of cardiac myofibril assembly. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:16151019 positive regulation of cardiac myofibril development GOC:TermGenie positive regulation of cardiac myofibril morphogenesis GOC:TermGenie up regulation of cardiac myofibril assembly GOC:TermGenie up regulation of cardiac myofibril development GOC:TermGenie up regulation of cardiac myofibril morphogenesis GOC:TermGenie up-regulation of cardiac myofibril assembly GOC:TermGenie up-regulation of cardiac myofibril development GOC:TermGenie up-regulation of cardiac myofibril morphogenesis GOC:TermGenie upregulation of cardiac myofibril assembly GOC:TermGenie upregulation of cardiac myofibril development GOC:TermGenie upregulation of cardiac myofibril morphogenesis GOC:TermGenie activation of cardiac myofibril assembly GOC:TermGenie activation of cardiac myofibril development GOC:TermGenie activation of cardiac myofibril morphogenesis GOC:TermGenie activation of heart myofibril assembly GOC:TermGenie positive regulation of heart myofibril assembly GOC:TermGenie up regulation of heart myofibril assembly GOC:TermGenie up-regulation of heart myofibril assembly GOC:TermGenie upregulation of heart myofibril assembly GOC:TermGenie Any process that modulates the frequency, rate or extent of cardiac neural crest cell migration involved in outflow tract morphogenesis. rl 2016-07-11T17:34:26Z biological_process GO:1905310 regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis GO:1905310 Any process that modulates the frequency, rate or extent of cardiac neural crest cell migration involved in outflow tract morphogenesis. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:17628518 Any process that stops, prevents or reduces the frequency, rate or extent of cardiac neural crest cell migration involved in outflow tract morphogenesis. rl 2016-07-11T17:34:35Z down regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis down-regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis downregulation of cardiac neural crest cell migration involved in outflow tract morphogenesis inhibition of cardiac neural crest cell migration involved in outflow tract morphogenesis biological_process GO:1905311 negative regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis GO:1905311 Any process that stops, prevents or reduces the frequency, rate or extent of cardiac neural crest cell migration involved in outflow tract morphogenesis. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:17628518 down regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis GOC:TermGenie down-regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis GOC:TermGenie downregulation of cardiac neural crest cell migration involved in outflow tract morphogenesis GOC:TermGenie inhibition of cardiac neural crest cell migration involved in outflow tract morphogenesis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of cardiac neural crest cell migration involved in outflow tract morphogenesis. rl 2016-07-11T17:34:43Z up regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis up-regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis upregulation of cardiac neural crest cell migration involved in outflow tract morphogenesis activation of cardiac neural crest cell migration involved in outflow tract morphogenesis biological_process GO:1905312 positive regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis GO:1905312 Any process that activates or increases the frequency, rate or extent of cardiac neural crest cell migration involved in outflow tract morphogenesis. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000058 PMID:17628518 up regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis GOC:TermGenie up-regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis GOC:TermGenie upregulation of cardiac neural crest cell migration involved in outflow tract morphogenesis GOC:TermGenie activation of cardiac neural crest cell migration involved in outflow tract morphogenesis GOC:TermGenie Any cell proliferation that is involved in endocardial cushion morphogenesis. rl 2016-07-12T13:56:36Z biological_process GO:1905315 cell proliferation involved in endocardial cushion morphogenesis GO:1905315 Any cell proliferation that is involved in endocardial cushion morphogenesis. GOC:BHF GOC:TermGenie GOC:rl GO_REF:0000060 PMID:20652948 The orderly movement of a mesenchymal stem cell from one site to another. sl 2016-07-14T17:13:02Z biological_process GO:1905319 mesenchymal stem cell migration GO:1905319 The orderly movement of a mesenchymal stem cell from one site to another. GOC:TermGenie GO_REF:0000091 PMID:24924806 PMID:25181476 Any process that modulates the frequency, rate or extent of mesenchymal stem cell migration. sl 2016-07-15T22:19:14Z biological_process GO:1905320 regulation of mesenchymal stem cell migration GO:1905320 Any process that modulates the frequency, rate or extent of mesenchymal stem cell migration. GOC:TermGenie GO_REF:0000058 PMID:26846297 Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal stem cell migration. sl 2016-07-15T22:19:22Z down regulation of mesenchymal stem cell migration down-regulation of mesenchymal stem cell migration downregulation of mesenchymal stem cell migration inhibition of mesenchymal stem cell migration biological_process GO:1905321 negative regulation of mesenchymal stem cell migration GO:1905321 Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal stem cell migration. GOC:TermGenie GO_REF:0000058 PMID:26846297 down regulation of mesenchymal stem cell migration GOC:TermGenie down-regulation of mesenchymal stem cell migration GOC:TermGenie downregulation of mesenchymal stem cell migration GOC:TermGenie inhibition of mesenchymal stem cell migration GOC:TermGenie Any process that activates or increases the frequency, rate or extent of mesenchymal stem cell migration. sl 2016-07-15T22:19:29Z up regulation of mesenchymal stem cell migration up-regulation of mesenchymal stem cell migration upregulation of mesenchymal stem cell migration activation of mesenchymal stem cell migration biological_process GO:1905322 positive regulation of mesenchymal stem cell migration GO:1905322 Any process that activates or increases the frequency, rate or extent of mesenchymal stem cell migration. GOC:TermGenie GO_REF:0000058 PMID:26846297 up regulation of mesenchymal stem cell migration GOC:TermGenie up-regulation of mesenchymal stem cell migration GOC:TermGenie upregulation of mesenchymal stem cell migration GOC:TermGenie activation of mesenchymal stem cell migration GOC:TermGenie Any process that modulates the frequency, rate or extent of morphogenesis of an epithelium. bhm 2016-07-22T07:13:49Z regulation of epithelium morphogenesis biological_process GO:1905330 An example of this is MMRN2 in human (Q9H8L6) in PMID:25745997 (inferred from direct assay). regulation of morphogenesis of an epithelium GO:1905330 Any process that modulates the frequency, rate or extent of morphogenesis of an epithelium. GOC:TermGenie GOC:bhm GO_REF:0000058 PMID:25745997 regulation of epithelium morphogenesis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of morphogenesis of an epithelium. bhm 2016-07-22T07:13:57Z down regulation of epithelium morphogenesis down regulation of morphogenesis of an epithelium down-regulation of epithelium morphogenesis down-regulation of morphogenesis of an epithelium downregulation of epithelium morphogenesis downregulation of morphogenesis of an epithelium negative regulation of epithelium morphogenesis inhibition of epithelium morphogenesis inhibition of morphogenesis of an epithelium biological_process GO:1905331 An example of this is MMRN2 in human (Q9H8L6) in PMID:25745997 (inferred from direct assay). negative regulation of morphogenesis of an epithelium GO:1905331 Any process that stops, prevents or reduces the frequency, rate or extent of morphogenesis of an epithelium. GOC:TermGenie GOC:bhm GO_REF:0000058 PMID:25745997 down regulation of epithelium morphogenesis GOC:TermGenie down regulation of morphogenesis of an epithelium GOC:TermGenie down-regulation of epithelium morphogenesis GOC:TermGenie down-regulation of morphogenesis of an epithelium GOC:TermGenie downregulation of epithelium morphogenesis GOC:TermGenie downregulation of morphogenesis of an epithelium GOC:TermGenie negative regulation of epithelium morphogenesis GOC:TermGenie inhibition of epithelium morphogenesis GOC:TermGenie inhibition of morphogenesis of an epithelium GOC:TermGenie Any process that activates or increases the frequency, rate or extent of morphogenesis of an epithelium. bhm 2016-07-22T07:14:05Z positive regulation of epithelium morphogenesis up regulation of epithelium morphogenesis up regulation of morphogenesis of an epithelium up-regulation of epithelium morphogenesis up-regulation of morphogenesis of an epithelium upregulation of epithelium morphogenesis upregulation of morphogenesis of an epithelium activation of epithelium morphogenesis activation of morphogenesis of an epithelium biological_process GO:1905332 An example of this is MMRN2 in human (Q9H8L6) in PMID:25745997 (inferred from direct assay). positive regulation of morphogenesis of an epithelium GO:1905332 Any process that activates or increases the frequency, rate or extent of morphogenesis of an epithelium. GOC:TermGenie GOC:bhm GO_REF:0000058 PMID:25745997 positive regulation of epithelium morphogenesis GOC:TermGenie up regulation of epithelium morphogenesis GOC:TermGenie up regulation of morphogenesis of an epithelium GOC:TermGenie up-regulation of epithelium morphogenesis GOC:TermGenie up-regulation of morphogenesis of an epithelium GOC:TermGenie upregulation of epithelium morphogenesis GOC:TermGenie upregulation of morphogenesis of an epithelium GOC:TermGenie activation of epithelium morphogenesis GOC:TermGenie activation of morphogenesis of an epithelium GOC:TermGenie The aggregation, arrangement and bonding together of a set of components to form a ciliary transition zone. pr 2016-08-04T14:49:43Z cilial transition zone assembly cilial transition zone formation ciliary transition zone formation cilium transition zone assembly cilium transition zone formation biological_process GO:1905349 ciliary transition zone assembly GO:1905349 The aggregation, arrangement and bonding together of a set of components to form a ciliary transition zone. GOC:TermGenie GOC:cilia GO_REF:0000079 PMID:21725307 PMID:23644468 PMID:24448408 PMID:26595381 PMID:26982032 cilial transition zone assembly GOC:TermGenie cilial transition zone formation GOC:TermGenie ciliary transition zone formation GOC:TermGenie cilium transition zone assembly GOC:TermGenie cilium transition zone formation GOC:TermGenie A process in which a protein is transported to, or maintained in, a location within a presynapse. dos 2016-08-18T14:42:59Z protein localisation in presynapse protein localisation to presynapse protein localization in presynapse recruitment of presynaptic proteins biological_process GO:1905383 protein localization to presynapse GO:1905383 A process in which a protein is transported to, or maintained in, a location within a presynapse. GOC:TermGenie GO_REF:0000087 PMID:24449494 protein localisation in presynapse GOC:TermGenie protein localisation to presynapse GOC:TermGenie protein localization in presynapse GOC:TermGenie recruitment of presynaptic proteins PMID:24449494 Any process that modulates the frequency, rate or extent of protein localization to presynapse. dos 2016-08-18T14:56:00Z regulation of protein localisation in presynapse regulation of protein localisation to presynapse regulation of protein localization in presynapse regulation of recruitment of presynaptic proteins biological_process GO:1905384 regulation of protein localization to presynapse GO:1905384 Any process that modulates the frequency, rate or extent of protein localization to presynapse. GOC:PARL GOC:TermGenie GOC:bf GO_REF:0000058 PMID:24449494 regulation of protein localisation in presynapse GOC:TermGenie regulation of protein localisation to presynapse GOC:TermGenie regulation of protein localization in presynapse GOC:TermGenie regulation of recruitment of presynaptic proteins GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to presynapse. dos 2016-08-18T14:56:08Z down regulation of protein localisation in presynapse down regulation of protein localisation to presynapse down regulation of protein localization in presynapse down regulation of protein localization to presynapse down regulation of recruitment of presynaptic proteins down-regulation of protein localisation in presynapse down-regulation of protein localisation to presynapse down-regulation of protein localization in presynapse down-regulation of protein localization to presynapse down-regulation of recruitment of presynaptic proteins downregulation of protein localisation in presynapse downregulation of protein localisation to presynapse downregulation of protein localization in presynapse downregulation of protein localization to presynapse downregulation of recruitment of presynaptic proteins negative regulation of protein localisation in presynapse negative regulation of protein localisation to presynapse negative regulation of protein localization in presynapse negative regulation of recruitment of presynaptic proteins inhibition of protein localisation in presynapse inhibition of protein localisation to presynapse inhibition of protein localization in presynapse inhibition of protein localization to presynapse inhibition of recruitment of presynaptic proteins biological_process GO:1905385 negative regulation of protein localization to presynapse GO:1905385 Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to presynapse. GOC:PARL GOC:TermGenie GOC:bf GO_REF:0000058 PMID:24449494 down regulation of protein localisation in presynapse GOC:TermGenie down regulation of protein localisation to presynapse GOC:TermGenie down regulation of protein localization in presynapse GOC:TermGenie down regulation of protein localization to presynapse GOC:TermGenie down regulation of recruitment of presynaptic proteins GOC:TermGenie down-regulation of protein localisation in presynapse GOC:TermGenie down-regulation of protein localisation to presynapse GOC:TermGenie down-regulation of protein localization in presynapse GOC:TermGenie down-regulation of protein localization to presynapse GOC:TermGenie down-regulation of recruitment of presynaptic proteins GOC:TermGenie downregulation of protein localisation in presynapse GOC:TermGenie downregulation of protein localisation to presynapse GOC:TermGenie downregulation of protein localization in presynapse GOC:TermGenie downregulation of protein localization to presynapse GOC:TermGenie downregulation of recruitment of presynaptic proteins GOC:TermGenie negative regulation of protein localisation in presynapse GOC:TermGenie negative regulation of protein localisation to presynapse GOC:TermGenie negative regulation of protein localization in presynapse GOC:TermGenie negative regulation of recruitment of presynaptic proteins GOC:TermGenie inhibition of protein localisation in presynapse GOC:TermGenie inhibition of protein localisation to presynapse GOC:TermGenie inhibition of protein localization in presynapse GOC:TermGenie inhibition of protein localization to presynapse GOC:TermGenie inhibition of recruitment of presynaptic proteins GOC:TermGenie Any process that activates or increases the frequency, rate or extent of protein localization to presynapse. dos 2016-08-18T14:56:21Z positive regulation of protein localisation in presynapse positive regulation of protein localisation to presynapse positive regulation of protein localization in presynapse positive regulation of recruitment of presynaptic proteins up regulation of protein localisation in presynapse up regulation of protein localisation to presynapse up regulation of protein localization in presynapse up regulation of protein localization to presynapse up regulation of recruitment of presynaptic proteins up-regulation of protein localisation in presynapse up-regulation of protein localisation to presynapse up-regulation of protein localization in presynapse up-regulation of protein localization to presynapse up-regulation of recruitment of presynaptic proteins upregulation of protein localisation in presynapse upregulation of protein localisation to presynapse upregulation of protein localization in presynapse upregulation of protein localization to presynapse upregulation of recruitment of presynaptic proteins activation of protein localisation in presynapse activation of protein localisation to presynapse activation of protein localization in presynapse activation of protein localization to presynapse activation of recruitment of presynaptic proteins biological_process GO:1905386 positive regulation of protein localization to presynapse GO:1905386 Any process that activates or increases the frequency, rate or extent of protein localization to presynapse. GOC:PARL GOC:TermGenie GOC:bf GO_REF:0000058 PMID:24449494 positive regulation of protein localisation in presynapse GOC:TermGenie positive regulation of protein localisation to presynapse GOC:TermGenie positive regulation of protein localization in presynapse GOC:TermGenie positive regulation of recruitment of presynaptic proteins GOC:TermGenie up regulation of protein localisation in presynapse GOC:TermGenie up regulation of protein localisation to presynapse GOC:TermGenie up regulation of protein localization in presynapse GOC:TermGenie up regulation of protein localization to presynapse GOC:TermGenie up regulation of recruitment of presynaptic proteins GOC:TermGenie up-regulation of protein localisation in presynapse GOC:TermGenie up-regulation of protein localisation to presynapse GOC:TermGenie up-regulation of protein localization in presynapse GOC:TermGenie up-regulation of protein localization to presynapse GOC:TermGenie up-regulation of recruitment of presynaptic proteins GOC:TermGenie upregulation of protein localisation in presynapse GOC:TermGenie upregulation of protein localisation to presynapse GOC:TermGenie upregulation of protein localization in presynapse GOC:TermGenie upregulation of protein localization to presynapse GOC:TermGenie upregulation of recruitment of presynaptic proteins GOC:TermGenie activation of protein localisation in presynapse GOC:TermGenie activation of protein localisation to presynapse GOC:TermGenie activation of protein localization in presynapse GOC:TermGenie activation of protein localization to presynapse GOC:TermGenie activation of recruitment of presynaptic proteins GOC:TermGenie Any process that modulates the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide. bf 2016-09-14T10:56:47Z biological_process regulation of neuropeptide-mediated retrograde trans-synaptic signaling GO:1905432 regulation of retrograde trans-synaptic signaling by neuropeptide GO:1905432 Any process that modulates the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide. GOC:PARL GOC:TermGenie GOC:bf GO_REF:0000058 PMID:19448629 regulation of neuropeptide-mediated retrograde trans-synaptic signaling GOC:bf Any process that stops, prevents or reduces the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide. bf 2016-09-14T10:56:55Z down regulation of retrograde trans-synaptic signaling by neuropeptide down-regulation of retrograde trans-synaptic signaling by neuropeptide downregulation of retrograde trans-synaptic signaling by neuropeptide inhibition of retrograde trans-synaptic signaling by neuropeptide biological_process inhibition of neuropeptide-mediated retrograde trans-synaptic signaling negative regulation of neuropeptide-mediated retrograde trans-synaptic signaling GO:1905433 negative regulation of retrograde trans-synaptic signaling by neuropeptide GO:1905433 Any process that stops, prevents or reduces the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide. GOC:PARL GOC:TermGenie GOC:bf GO_REF:0000058 PMID:19448629 down regulation of retrograde trans-synaptic signaling by neuropeptide GOC:TermGenie down-regulation of retrograde trans-synaptic signaling by neuropeptide GOC:TermGenie downregulation of retrograde trans-synaptic signaling by neuropeptide GOC:TermGenie inhibition of retrograde trans-synaptic signaling by neuropeptide GOC:TermGenie inhibition of neuropeptide-mediated retrograde trans-synaptic signaling GOC:bf negative regulation of neuropeptide-mediated retrograde trans-synaptic signaling GOC:bf Any process that activates or increases the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide. bf 2016-09-14T10:57:02Z up regulation of retrograde trans-synaptic signaling by neuropeptide up-regulation of retrograde trans-synaptic signaling by neuropeptide upregulation of retrograde trans-synaptic signaling by neuropeptide activation of retrograde trans-synaptic signaling by neuropeptide biological_process positive regulation of neuropeptide-mediated retrograde trans-synaptic signaling GO:1905434 positive regulation of retrograde trans-synaptic signaling by neuropeptide GO:1905434 Any process that activates or increases the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide. GOC:PARL GOC:TermGenie GOC:bf GO_REF:0000058 PMID:19448629 up regulation of retrograde trans-synaptic signaling by neuropeptide GOC:TermGenie up-regulation of retrograde trans-synaptic signaling by neuropeptide GOC:TermGenie upregulation of retrograde trans-synaptic signaling by neuropeptide GOC:TermGenie activation of retrograde trans-synaptic signaling by neuropeptide GOC:TermGenie positive regulation of neuropeptide-mediated retrograde trans-synaptic signaling GOC:bf Any process that modulates the frequency, rate or extent of myeloid progenitor cell differentiation. rz 2016-09-16T12:32:18Z biological_process GO:1905453 regulation of myeloid progenitor cell differentiation GO:1905453 Any process that modulates the frequency, rate or extent of myeloid progenitor cell differentiation. GOC:TermGenie GO_REF:0000058 PMID:27010503 Any process that stops, prevents or reduces the frequency, rate or extent of myeloid progenitor cell differentiation. rz 2016-09-16T12:32:26Z down regulation of myeloid progenitor cell differentiation down-regulation of myeloid progenitor cell differentiation downregulation of myeloid progenitor cell differentiation inhibition of myeloid progenitor cell differentiation biological_process GO:1905454 negative regulation of myeloid progenitor cell differentiation GO:1905454 Any process that stops, prevents or reduces the frequency, rate or extent of myeloid progenitor cell differentiation. GOC:TermGenie GO_REF:0000058 PMID:27010503 down regulation of myeloid progenitor cell differentiation GOC:TermGenie down-regulation of myeloid progenitor cell differentiation GOC:TermGenie downregulation of myeloid progenitor cell differentiation GOC:TermGenie inhibition of myeloid progenitor cell differentiation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of myeloid progenitor cell differentiation. rz 2016-09-16T12:32:33Z up regulation of myeloid progenitor cell differentiation up-regulation of myeloid progenitor cell differentiation upregulation of myeloid progenitor cell differentiation activation of myeloid progenitor cell differentiation biological_process GO:1905455 positive regulation of myeloid progenitor cell differentiation GO:1905455 Any process that activates or increases the frequency, rate or extent of myeloid progenitor cell differentiation. GOC:TermGenie GO_REF:0000058 PMID:27010503 up regulation of myeloid progenitor cell differentiation GOC:TermGenie up-regulation of myeloid progenitor cell differentiation GOC:TermGenie upregulation of myeloid progenitor cell differentiation GOC:TermGenie activation of myeloid progenitor cell differentiation GOC:TermGenie Any process that modulates the frequency, rate or extent of lymphoid progenitor cell differentiation. rz 2016-09-16T12:32:40Z biological_process GO:1905456 regulation of lymphoid progenitor cell differentiation GO:1905456 Any process that modulates the frequency, rate or extent of lymphoid progenitor cell differentiation. GOC:TermGenie GO_REF:0000058 PMID:27010503 Any process that stops, prevents or reduces the frequency, rate or extent of lymphoid progenitor cell differentiation. rz 2016-09-16T12:32:48Z down regulation of lymphoid progenitor cell differentiation down-regulation of lymphoid progenitor cell differentiation downregulation of lymphoid progenitor cell differentiation inhibition of lymphoid progenitor cell differentiation biological_process GO:1905457 negative regulation of lymphoid progenitor cell differentiation GO:1905457 Any process that stops, prevents or reduces the frequency, rate or extent of lymphoid progenitor cell differentiation. GOC:TermGenie GO_REF:0000058 PMID:27010503 down regulation of lymphoid progenitor cell differentiation GOC:TermGenie down-regulation of lymphoid progenitor cell differentiation GOC:TermGenie downregulation of lymphoid progenitor cell differentiation GOC:TermGenie inhibition of lymphoid progenitor cell differentiation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of lymphoid progenitor cell differentiation. rz 2016-09-16T12:32:55Z up regulation of lymphoid progenitor cell differentiation up-regulation of lymphoid progenitor cell differentiation upregulation of lymphoid progenitor cell differentiation activation of lymphoid progenitor cell differentiation biological_process GO:1905458 positive regulation of lymphoid progenitor cell differentiation GO:1905458 Any process that activates or increases the frequency, rate or extent of lymphoid progenitor cell differentiation. GOC:TermGenie GO_REF:0000058 PMID:27010503 up regulation of lymphoid progenitor cell differentiation GOC:TermGenie up-regulation of lymphoid progenitor cell differentiation GOC:TermGenie upregulation of lymphoid progenitor cell differentiation GOC:TermGenie activation of lymphoid progenitor cell differentiation GOC:TermGenie Any process that modulates the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process. rph 2016-09-19T11:33:54Z regulation of VSMC apoptotic process regulation of vascular smooth muscle cell apoptotic process regulation of VSMC apoptosis regulation of vascular associated smooth muscle cell apoptosis regulation of vascular smooth muscle cell apoptosis biological_process GO:1905459 regulation of vascular associated smooth muscle cell apoptotic process GO:1905459 Any process that modulates the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:26493107 regulation of VSMC apoptotic process GOC:TermGenie regulation of vascular smooth muscle cell apoptotic process GOC:TermGenie regulation of VSMC apoptosis GOC:TermGenie regulation of vascular associated smooth muscle cell apoptosis GOC:TermGenie regulation of vascular smooth muscle cell apoptosis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process. rph 2016-09-19T11:34:03Z down regulation of VSMC apoptotic process down regulation of vascular associated smooth muscle cell apoptotic process down regulation of vascular smooth muscle cell apoptotic process down-regulation of VSMC apoptotic process down-regulation of vascular associated smooth muscle cell apoptotic process down-regulation of vascular smooth muscle cell apoptotic process downregulation of VSMC apoptotic process downregulation of vascular associated smooth muscle cell apoptotic process downregulation of vascular smooth muscle cell apoptotic process negative regulation of VSMC apoptotic process negative regulation of vascular smooth muscle cell apoptotic process down regulation of VSMC apoptosis down regulation of vascular associated smooth muscle cell apoptosis down regulation of vascular smooth muscle cell apoptosis down-regulation of VSMC apoptosis down-regulation of vascular associated smooth muscle cell apoptosis down-regulation of vascular smooth muscle cell apoptosis downregulation of VSMC apoptosis downregulation of vascular associated smooth muscle cell apoptosis downregulation of vascular smooth muscle cell apoptosis inhibition of VSMC apoptosis inhibition of VSMC apoptotic process inhibition of vascular associated smooth muscle cell apoptosis inhibition of vascular associated smooth muscle cell apoptotic process inhibition of vascular smooth muscle cell apoptosis inhibition of vascular smooth muscle cell apoptotic process negative regulation of VSMC apoptosis negative regulation of vascular associated smooth muscle cell apoptosis negative regulation of vascular smooth muscle cell apoptosis biological_process GO:1905460 negative regulation of vascular associated smooth muscle cell apoptotic process GO:1905460 Any process that stops, prevents or reduces the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:26493107 down regulation of VSMC apoptotic process GOC:TermGenie down regulation of vascular associated smooth muscle cell apoptotic process GOC:TermGenie down regulation of vascular smooth muscle cell apoptotic process GOC:TermGenie down-regulation of VSMC apoptotic process GOC:TermGenie down-regulation of vascular associated smooth muscle cell apoptotic process GOC:TermGenie down-regulation of vascular smooth muscle cell apoptotic process GOC:TermGenie downregulation of VSMC apoptotic process GOC:TermGenie downregulation of vascular associated smooth muscle cell apoptotic process GOC:TermGenie downregulation of vascular smooth muscle cell apoptotic process GOC:TermGenie negative regulation of VSMC apoptotic process GOC:TermGenie negative regulation of vascular smooth muscle cell apoptotic process GOC:TermGenie down regulation of VSMC apoptosis GOC:TermGenie down regulation of vascular associated smooth muscle cell apoptosis GOC:TermGenie down regulation of vascular smooth muscle cell apoptosis GOC:TermGenie down-regulation of VSMC apoptosis GOC:TermGenie down-regulation of vascular associated smooth muscle cell apoptosis GOC:TermGenie down-regulation of vascular smooth muscle cell apoptosis GOC:TermGenie downregulation of VSMC apoptosis GOC:TermGenie downregulation of vascular associated smooth muscle cell apoptosis GOC:TermGenie downregulation of vascular smooth muscle cell apoptosis GOC:TermGenie inhibition of VSMC apoptosis GOC:TermGenie inhibition of VSMC apoptotic process GOC:TermGenie inhibition of vascular associated smooth muscle cell apoptosis GOC:TermGenie inhibition of vascular associated smooth muscle cell apoptotic process GOC:TermGenie inhibition of vascular smooth muscle cell apoptosis GOC:TermGenie inhibition of vascular smooth muscle cell apoptotic process GOC:TermGenie negative regulation of VSMC apoptosis GOC:TermGenie negative regulation of vascular associated smooth muscle cell apoptosis GOC:TermGenie negative regulation of vascular smooth muscle cell apoptosis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process. rph 2016-09-19T11:34:10Z positive regulation of VSMC apoptotic process positive regulation of vascular smooth muscle cell apoptotic process up regulation of VSMC apoptotic process up regulation of vascular associated smooth muscle cell apoptotic process up regulation of vascular smooth muscle cell apoptotic process up-regulation of VSMC apoptotic process up-regulation of vascular associated smooth muscle cell apoptotic process up-regulation of vascular smooth muscle cell apoptotic process upregulation of VSMC apoptotic process upregulation of vascular associated smooth muscle cell apoptotic process upregulation of vascular smooth muscle cell apoptotic process activation of VSMC apoptosis activation of VSMC apoptotic process activation of vascular associated smooth muscle cell apoptosis activation of vascular associated smooth muscle cell apoptotic process activation of vascular smooth muscle cell apoptosis activation of vascular smooth muscle cell apoptotic process positive regulation of VSMC apoptosis positive regulation of vascular associated smooth muscle cell apoptosis positive regulation of vascular smooth muscle cell apoptosis up regulation of VSMC apoptosis up regulation of vascular associated smooth muscle cell apoptosis up regulation of vascular smooth muscle cell apoptosis up-regulation of VSMC apoptosis up-regulation of vascular associated smooth muscle cell apoptosis up-regulation of vascular smooth muscle cell apoptosis upregulation of VSMC apoptosis upregulation of vascular associated smooth muscle cell apoptosis upregulation of vascular smooth muscle cell apoptosis biological_process GO:1905461 positive regulation of vascular associated smooth muscle cell apoptotic process GO:1905461 Any process that activates or increases the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:26493107 positive regulation of VSMC apoptotic process GOC:TermGenie positive regulation of vascular smooth muscle cell apoptotic process GOC:TermGenie up regulation of VSMC apoptotic process GOC:TermGenie up regulation of vascular associated smooth muscle cell apoptotic process GOC:TermGenie up regulation of vascular smooth muscle cell apoptotic process GOC:TermGenie up-regulation of VSMC apoptotic process GOC:TermGenie up-regulation of vascular associated smooth muscle cell apoptotic process GOC:TermGenie up-regulation of vascular smooth muscle cell apoptotic process GOC:TermGenie upregulation of VSMC apoptotic process GOC:TermGenie upregulation of vascular associated smooth muscle cell apoptotic process GOC:TermGenie upregulation of vascular smooth muscle cell apoptotic process GOC:TermGenie activation of VSMC apoptosis GOC:TermGenie activation of VSMC apoptotic process GOC:TermGenie activation of vascular associated smooth muscle cell apoptosis GOC:TermGenie activation of vascular associated smooth muscle cell apoptotic process GOC:TermGenie activation of vascular smooth muscle cell apoptosis GOC:TermGenie activation of vascular smooth muscle cell apoptotic process GOC:TermGenie positive regulation of VSMC apoptosis GOC:TermGenie positive regulation of vascular associated smooth muscle cell apoptosis GOC:TermGenie positive regulation of vascular smooth muscle cell apoptosis GOC:TermGenie up regulation of VSMC apoptosis GOC:TermGenie up regulation of vascular associated smooth muscle cell apoptosis GOC:TermGenie up regulation of vascular smooth muscle cell apoptosis GOC:TermGenie up-regulation of VSMC apoptosis GOC:TermGenie up-regulation of vascular associated smooth muscle cell apoptosis GOC:TermGenie up-regulation of vascular smooth muscle cell apoptosis GOC:TermGenie upregulation of VSMC apoptosis GOC:TermGenie upregulation of vascular associated smooth muscle cell apoptosis GOC:TermGenie upregulation of vascular smooth muscle cell apoptosis GOC:TermGenie Any process that modulates the frequency, rate or extent of protein localization to membrane. bc 2016-09-21T16:20:03Z regulation of protein localisation in membrane regulation of protein localization in membrane biological_process GO:1905475 regulation of protein localization to membrane GO:1905475 Any process that modulates the frequency, rate or extent of protein localization to membrane. GOC:PARL GOC:TermGenie GOC:bc GO_REF:0000058 PMID:26911690 regulation of protein localisation in membrane GOC:TermGenie regulation of protein localization in membrane GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to membrane. bc 2016-09-21T16:20:10Z down regulation of protein localisation in membrane down regulation of protein localization in membrane down regulation of protein localization to membrane down-regulation of protein localisation in membrane down-regulation of protein localization in membrane down-regulation of protein localization to membrane downregulation of protein localisation in membrane downregulation of protein localization in membrane downregulation of protein localization to membrane negative regulation of protein localisation in membrane negative regulation of protein localization in membrane inhibition of protein localisation in membrane inhibition of protein localization in membrane inhibition of protein localization to membrane biological_process GO:1905476 negative regulation of protein localization to membrane GO:1905476 Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to membrane. GOC:PARL GOC:TermGenie GOC:bc GO_REF:0000058 PMID:26911690 down regulation of protein localisation in membrane GOC:TermGenie down regulation of protein localization in membrane GOC:TermGenie down regulation of protein localization to membrane GOC:TermGenie down-regulation of protein localisation in membrane GOC:TermGenie down-regulation of protein localization in membrane GOC:TermGenie down-regulation of protein localization to membrane GOC:TermGenie downregulation of protein localisation in membrane GOC:TermGenie downregulation of protein localization in membrane GOC:TermGenie downregulation of protein localization to membrane GOC:TermGenie negative regulation of protein localisation in membrane GOC:TermGenie negative regulation of protein localization in membrane GOC:TermGenie inhibition of protein localisation in membrane GOC:TermGenie inhibition of protein localization in membrane GOC:TermGenie inhibition of protein localization to membrane GOC:TermGenie Any process that activates or increases the frequency, rate or extent of protein localization to membrane. bc 2016-09-21T16:20:18Z positive regulation of protein localisation in membrane positive regulation of protein localization in membrane up regulation of protein localisation in membrane up regulation of protein localization in membrane up regulation of protein localization to membrane up-regulation of protein localisation in membrane up-regulation of protein localization in membrane up-regulation of protein localization to membrane upregulation of protein localisation in membrane upregulation of protein localization in membrane upregulation of protein localization to membrane activation of protein localisation in membrane activation of protein localization in membrane activation of protein localization to membrane biological_process GO:1905477 positive regulation of protein localization to membrane GO:1905477 Any process that activates or increases the frequency, rate or extent of protein localization to membrane. GOC:PARL GOC:TermGenie GOC:bc GO_REF:0000058 PMID:26911690 positive regulation of protein localisation in membrane GOC:TermGenie positive regulation of protein localization in membrane GOC:TermGenie up regulation of protein localisation in membrane GOC:TermGenie up regulation of protein localization in membrane GOC:TermGenie up regulation of protein localization to membrane GOC:TermGenie up-regulation of protein localisation in membrane GOC:TermGenie up-regulation of protein localization in membrane GOC:TermGenie up-regulation of protein localization to membrane GOC:TermGenie upregulation of protein localisation in membrane GOC:TermGenie upregulation of protein localization in membrane GOC:TermGenie upregulation of protein localization to membrane GOC:TermGenie activation of protein localisation in membrane GOC:TermGenie activation of protein localization in membrane GOC:TermGenie activation of protein localization to membrane GOC:TermGenie Any process that modulates the frequency, rate or extent of motor neuron migration. hbye 2016-09-23T12:49:54Z biological_process GO:1905483 regulation of motor neuron migration GO:1905483 Any process that modulates the frequency, rate or extent of motor neuron migration. GOC:TermGenie GO_REF:0000058 PMID:16516839 Any process that stops, prevents or reduces the frequency, rate or extent of motor neuron migration. hbye 2016-09-23T12:50:11Z down regulation of motor neuron migration down-regulation of motor neuron migration downregulation of motor neuron migration inhibition of motor neuron migration biological_process GO:1905484 negative regulation of motor neuron migration GO:1905484 Any process that stops, prevents or reduces the frequency, rate or extent of motor neuron migration. GOC:TermGenie GO_REF:0000058 PMID:16516839 down regulation of motor neuron migration GOC:TermGenie down-regulation of motor neuron migration GOC:TermGenie downregulation of motor neuron migration GOC:TermGenie inhibition of motor neuron migration GOC:TermGenie Any process that activates or increases the frequency, rate or extent of motor neuron migration. hbye 2016-09-23T12:50:19Z up regulation of motor neuron migration up-regulation of motor neuron migration upregulation of motor neuron migration activation of motor neuron migration biological_process GO:1905485 positive regulation of motor neuron migration GO:1905485 Any process that activates or increases the frequency, rate or extent of motor neuron migration. GOC:TermGenie GO_REF:0000058 PMID:16516839 up regulation of motor neuron migration GOC:TermGenie up-regulation of motor neuron migration GOC:TermGenie upregulation of motor neuron migration GOC:TermGenie activation of motor neuron migration GOC:TermGenie Any process that activates or increases the frequency, rate or extent of branching morphogenesis of a nerve. hbye 2016-09-23T14:11:52Z up regulation of branching morphogenesis of a nerve up-regulation of branching morphogenesis of a nerve upregulation of branching morphogenesis of a nerve activation of branching morphogenesis of a nerve biological_process GO:1905492 positive regulation of branching morphogenesis of a nerve GO:1905492 Any process that activates or increases the frequency, rate or extent of branching morphogenesis of a nerve. GOC:TermGenie GO_REF:0000058 PMID:16516839 up regulation of branching morphogenesis of a nerve GOC:TermGenie up-regulation of branching morphogenesis of a nerve GOC:TermGenie upregulation of branching morphogenesis of a nerve GOC:TermGenie activation of branching morphogenesis of a nerve GOC:TermGenie Any process that modulates the frequency, rate or extent of motile cilium assembly. krc 2016-09-27T18:27:47Z biological_process regulation of motile primary cilia assembly regulation of motile primary cilia formation regulation of motile primary cilium assembly regulation of motile primary cilium formation regulation of nodal cilium assembly regulation of nodal cilium formation GO:1905503 regulation of motile cilium assembly GO:1905503 Any process that modulates the frequency, rate or extent of motile cilium assembly. GOC:TermGenie GOC:cilia GOC:krc GO_REF:0000058 PMID:25294941 regulation of motile primary cilia assembly GOC:TermGenie regulation of motile primary cilia formation GOC:TermGenie regulation of motile primary cilium formation GOC:TermGenie regulation of nodal cilium assembly GOC:TermGenie regulation of nodal cilium formation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of motile cilium assembly. krc 2016-09-27T18:27:55Z inhibition of motile primary cilia assembly inhibition of motile primary cilia formation inhibition of motile primary cilium assembly inhibition of motile primary cilium formation biological_process down regulation of motile primary cilia assembly down regulation of motile primary cilia formation down regulation of motile primary cilium assembly down regulation of motile primary cilium formation down regulation of nodal cilium assembly down regulation of nodal cilium formation down-regulation of motile primary cilia assembly down-regulation of motile primary cilia formation down-regulation of motile primary cilium assembly down-regulation of motile primary cilium formation down-regulation of nodal cilium assembly down-regulation of nodal cilium formation downregulation of motile primary cilia assembly downregulation of motile primary cilia formation downregulation of motile primary cilium assembly downregulation of motile primary cilium formation downregulation of nodal cilium assembly downregulation of nodal cilium formation inhibition of nodal cilium assembly inhibition of nodal cilium formation negative regulation of motile primary cilia assembly negative regulation of motile primary cilia formation negative regulation of motile primary cilium assembly negative regulation of motile primary cilium formation negative regulation of nodal cilium assembly negative regulation of nodal cilium formation GO:1905504 negative regulation of motile cilium assembly GO:1905504 Any process that stops, prevents or reduces the frequency, rate or extent of motile cilium assembly. GOC:TermGenie GOC:cilia GOC:krc GO_REF:0000058 PMID:25294941 inhibition of motile primary cilia assembly GOC:TermGenie inhibition of motile primary cilia formation GOC:TermGenie inhibition of motile primary cilium assembly GOC:TermGenie inhibition of motile primary cilium formation GOC:TermGenie down regulation of motile primary cilia assembly GOC:TermGenie down regulation of motile primary cilia formation GOC:TermGenie down regulation of motile primary cilium assembly GOC:TermGenie down regulation of motile primary cilium formation GOC:TermGenie down regulation of nodal cilium assembly GOC:TermGenie down regulation of nodal cilium formation GOC:TermGenie down-regulation of motile primary cilia assembly GOC:TermGenie down-regulation of motile primary cilia formation GOC:TermGenie down-regulation of motile primary cilium assembly GOC:TermGenie down-regulation of motile primary cilium formation GOC:TermGenie down-regulation of nodal cilium assembly GOC:TermGenie down-regulation of nodal cilium formation GOC:TermGenie downregulation of motile primary cilia assembly GOC:TermGenie downregulation of motile primary cilia formation GOC:TermGenie downregulation of motile primary cilium assembly GOC:TermGenie downregulation of motile primary cilium formation GOC:TermGenie downregulation of nodal cilium assembly GOC:TermGenie downregulation of nodal cilium formation GOC:TermGenie inhibition of nodal cilium assembly GOC:TermGenie inhibition of nodal cilium formation GOC:TermGenie negative regulation of motile primary cilia assembly GOC:TermGenie negative regulation of motile primary cilia formation GOC:TermGenie negative regulation of motile primary cilium formation GOC:TermGenie negative regulation of nodal cilium assembly GOC:TermGenie negative regulation of nodal cilium formation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of motile cilium assembly. krc 2016-09-27T18:28:03Z activation of motile primary cilia assembly activation of motile primary cilia formation activation of motile primary cilium assembly activation of motile primary cilium formation biological_process activation of nodal cilium assembly activation of nodal cilium formation positive regulation of motile primary cilia assembly positive regulation of motile primary cilia formation positive regulation of motile primary cilium assembly positive regulation of motile primary cilium formation positive regulation of nodal cilium assembly positive regulation of nodal cilium formation up regulation of motile primary cilia assembly up regulation of motile primary cilia formation up regulation of motile primary cilium assembly up regulation of motile primary cilium formation up regulation of nodal cilium assembly up regulation of nodal cilium formation up-regulation of motile primary cilia assembly up-regulation of motile primary cilia formation up-regulation of motile primary cilium assembly up-regulation of motile primary cilium formation up-regulation of nodal cilium assembly up-regulation of nodal cilium formation upregulation of motile primary cilia assembly upregulation of motile primary cilia formation upregulation of motile primary cilium assembly upregulation of motile primary cilium formation upregulation of nodal cilium assembly upregulation of nodal cilium formation GO:1905505 positive regulation of motile cilium assembly GO:1905505 Any process that activates or increases the frequency, rate or extent of motile cilium assembly. GOC:TermGenie GOC:cilia GOC:krc GO_REF:0000058 PMID:25294941 activation of motile primary cilia assembly GOC:TermGenie activation of motile primary cilia formation GOC:TermGenie activation of motile primary cilium assembly GOC:TermGenie activation of motile primary cilium formation GOC:TermGenie activation of nodal cilium assembly GOC:TermGenie activation of nodal cilium formation GOC:TermGenie positive regulation of motile primary cilia assembly GOC:TermGenie positive regulation of motile primary cilia formation GOC:TermGenie positive regulation of motile primary cilium formation GOC:TermGenie positive regulation of nodal cilium assembly GOC:TermGenie positive regulation of nodal cilium formation GOC:TermGenie up regulation of motile primary cilia assembly GOC:TermGenie up regulation of motile primary cilia formation GOC:TermGenie up regulation of motile primary cilium assembly GOC:TermGenie up regulation of motile primary cilium formation GOC:TermGenie up regulation of nodal cilium assembly GOC:TermGenie up regulation of nodal cilium formation GOC:TermGenie up-regulation of motile primary cilia assembly GOC:TermGenie up-regulation of motile primary cilia formation GOC:TermGenie up-regulation of motile primary cilium assembly GOC:TermGenie up-regulation of motile primary cilium formation GOC:TermGenie up-regulation of nodal cilium assembly GOC:TermGenie up-regulation of nodal cilium formation GOC:TermGenie upregulation of motile primary cilia assembly GOC:TermGenie upregulation of motile primary cilia formation GOC:TermGenie upregulation of motile primary cilium assembly GOC:TermGenie upregulation of motile primary cilium formation GOC:TermGenie upregulation of nodal cilium assembly GOC:TermGenie upregulation of nodal cilium formation GOC:TermGenie A process in which a protein is transported to, or maintained in, a location within a microtubule organizing center. mah 2016-09-28T12:32:16Z protein localisation in microtubule organizing center protein localisation to microtubule organizing center protein localization in microtubule organizing center biological_process GO:1905508 protein localization to microtubule organizing center GO:1905508 A process in which a protein is transported to, or maintained in, a location within a microtubule organizing center. GOC:TermGenie GO_REF:0000087 PMID:19001497 protein localisation in microtubule organizing center GOC:TermGenie protein localisation to microtubule organizing center GOC:TermGenie protein localization in microtubule organizing center GOC:TermGenie Any process that activates or increases the frequency, rate or extent of fertilization. pr 2016-09-30T14:32:32Z positive regulation of syngamy up regulation of fertilization up regulation of syngamy up-regulation of fertilization up-regulation of syngamy upregulation of fertilization upregulation of syngamy activation of fertilization activation of syngamy biological_process GO:1905516 positive regulation of fertilization GO:1905516 Any process that activates or increases the frequency, rate or extent of fertilization. GOC:TermGenie GOC:hbye GO_REF:0000058 PMID:27564576 positive regulation of syngamy GOC:TermGenie up regulation of fertilization GOC:TermGenie up regulation of syngamy GOC:TermGenie up-regulation of fertilization GOC:TermGenie up-regulation of syngamy GOC:TermGenie upregulation of fertilization GOC:TermGenie upregulation of syngamy GOC:TermGenie activation of fertilization GOC:TermGenie activation of syngamy GOC:TermGenie Any process that modulates the frequency, rate or extent of blood vessel branching. nc 2016-10-12T14:19:33Z regulation of branching involved in blood vessel morphogenesis biological_process GO:1905553 regulation of blood vessel branching GO:1905553 Any process that modulates the frequency, rate or extent of blood vessel branching. GOC:BHF GOC:BHF_telomere GOC:TermGenie GOC:nc GO_REF:0000058 PMID:23201774 regulation of branching involved in blood vessel morphogenesis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of blood vessel branching. nc 2016-10-12T14:19:41Z down regulation of branching involved in blood vessel morphogenesis down regulation of patterning of blood vessels down-regulation of branching involved in blood vessel morphogenesis down-regulation of patterning of blood vessels downregulation of branching involved in blood vessel morphogenesis downregulation of patterning of blood vessels negative regulation of branching involved in blood vessel morphogenesis inhibition of branching involved in blood vessel morphogenesis inhibition of patterning of blood vessels biological_process GO:1905554 negative regulation of blood vessel branching GO:1905554 Any process that stops, prevents or reduces the frequency, rate or extent of blood vessel branching. GOC:BHF GOC:BHF_telomere GOC:TermGenie GOC:nc GO_REF:0000058 PMID:23201774 down regulation of branching involved in blood vessel morphogenesis GOC:TermGenie down regulation of patterning of blood vessels GOC:TermGenie down-regulation of branching involved in blood vessel morphogenesis GOC:TermGenie down-regulation of patterning of blood vessels GOC:TermGenie downregulation of branching involved in blood vessel morphogenesis GOC:TermGenie downregulation of patterning of blood vessels GOC:TermGenie negative regulation of branching involved in blood vessel morphogenesis GOC:TermGenie inhibition of branching involved in blood vessel morphogenesis GOC:TermGenie inhibition of patterning of blood vessels GOC:TermGenie Any process that activates or increases the frequency, rate or extent of blood vessel branching. nc 2016-10-12T14:19:49Z positive regulation of branching involved in blood vessel morphogenesis up regulation of branching involved in blood vessel morphogenesis up regulation of patterning of blood vessels up-regulation of branching involved in blood vessel morphogenesis up-regulation of patterning of blood vessels upregulation of branching involved in blood vessel morphogenesis upregulation of patterning of blood vessels activation of branching involved in blood vessel morphogenesis activation of patterning of blood vessels biological_process GO:1905555 positive regulation of blood vessel branching GO:1905555 Any process that activates or increases the frequency, rate or extent of blood vessel branching. GOC:BHF GOC:BHF_telomere GOC:TermGenie GOC:nc GO_REF:0000058 PMID:23201774 positive regulation of branching involved in blood vessel morphogenesis GOC:TermGenie up regulation of branching involved in blood vessel morphogenesis GOC:TermGenie up regulation of patterning of blood vessels GOC:TermGenie up-regulation of branching involved in blood vessel morphogenesis GOC:TermGenie up-regulation of patterning of blood vessels GOC:TermGenie upregulation of branching involved in blood vessel morphogenesis GOC:TermGenie upregulation of patterning of blood vessels GOC:TermGenie activation of branching involved in blood vessel morphogenesis GOC:TermGenie activation of patterning of blood vessels GOC:TermGenie Any process that modulates the frequency, rate or extent of mitotic nuclear envelope disassembly. hbye 2016-10-14T13:14:57Z regulation of mitotic nuclear envelope breakdown regulation of mitotic nuclear envelope catabolism regulation of mitotic nuclear envelope degradation biological_process GO:1905557 regulation of mitotic nuclear envelope disassembly GO:1905557 Any process that modulates the frequency, rate or extent of mitotic nuclear envelope disassembly. GOC:TermGenie GO_REF:0000058 PMID:18765790 regulation of mitotic nuclear envelope breakdown GOC:TermGenie regulation of mitotic nuclear envelope catabolism GOC:TermGenie regulation of mitotic nuclear envelope degradation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of mitotic nuclear envelope disassembly. hbye 2016-10-14T13:15:08Z down regulation of mitotic nuclear envelope breakdown down regulation of mitotic nuclear envelope catabolism down regulation of mitotic nuclear envelope degradation down regulation of mitotic nuclear envelope disassembly down-regulation of mitotic nuclear envelope breakdown down-regulation of mitotic nuclear envelope catabolism down-regulation of mitotic nuclear envelope degradation down-regulation of mitotic nuclear envelope disassembly downregulation of mitotic nuclear envelope breakdown downregulation of mitotic nuclear envelope catabolism downregulation of mitotic nuclear envelope degradation downregulation of mitotic nuclear envelope disassembly negative regulation of mitotic nuclear envelope breakdown negative regulation of mitotic nuclear envelope catabolism negative regulation of mitotic nuclear envelope degradation inhibition of mitotic nuclear envelope breakdown inhibition of mitotic nuclear envelope catabolism inhibition of mitotic nuclear envelope degradation inhibition of mitotic nuclear envelope disassembly biological_process GO:1905558 negative regulation of mitotic nuclear envelope disassembly GO:1905558 Any process that stops, prevents or reduces the frequency, rate or extent of mitotic nuclear envelope disassembly. GOC:TermGenie GO_REF:0000058 PMID:18765790 down regulation of mitotic nuclear envelope breakdown GOC:TermGenie down regulation of mitotic nuclear envelope catabolism GOC:TermGenie down regulation of mitotic nuclear envelope degradation GOC:TermGenie down regulation of mitotic nuclear envelope disassembly GOC:TermGenie down-regulation of mitotic nuclear envelope breakdown GOC:TermGenie down-regulation of mitotic nuclear envelope catabolism GOC:TermGenie down-regulation of mitotic nuclear envelope degradation GOC:TermGenie down-regulation of mitotic nuclear envelope disassembly GOC:TermGenie downregulation of mitotic nuclear envelope breakdown GOC:TermGenie downregulation of mitotic nuclear envelope catabolism GOC:TermGenie downregulation of mitotic nuclear envelope degradation GOC:TermGenie downregulation of mitotic nuclear envelope disassembly GOC:TermGenie negative regulation of mitotic nuclear envelope breakdown GOC:TermGenie negative regulation of mitotic nuclear envelope catabolism GOC:TermGenie negative regulation of mitotic nuclear envelope degradation GOC:TermGenie inhibition of mitotic nuclear envelope breakdown GOC:TermGenie inhibition of mitotic nuclear envelope catabolism GOC:TermGenie inhibition of mitotic nuclear envelope degradation GOC:TermGenie inhibition of mitotic nuclear envelope disassembly GOC:TermGenie Any process that activates or increases the frequency, rate or extent of mitotic nuclear envelope disassembly. hbye 2016-10-14T13:15:17Z positive regulation of mitotic nuclear envelope breakdown positive regulation of mitotic nuclear envelope catabolism positive regulation of mitotic nuclear envelope degradation up regulation of mitotic nuclear envelope breakdown up regulation of mitotic nuclear envelope catabolism up regulation of mitotic nuclear envelope degradation up regulation of mitotic nuclear envelope disassembly up-regulation of mitotic nuclear envelope breakdown up-regulation of mitotic nuclear envelope catabolism up-regulation of mitotic nuclear envelope degradation up-regulation of mitotic nuclear envelope disassembly upregulation of mitotic nuclear envelope breakdown upregulation of mitotic nuclear envelope catabolism upregulation of mitotic nuclear envelope degradation upregulation of mitotic nuclear envelope disassembly activation of mitotic nuclear envelope breakdown activation of mitotic nuclear envelope catabolism activation of mitotic nuclear envelope degradation activation of mitotic nuclear envelope disassembly biological_process GO:1905559 positive regulation of mitotic nuclear envelope disassembly GO:1905559 Any process that activates or increases the frequency, rate or extent of mitotic nuclear envelope disassembly. GOC:TermGenie GO_REF:0000058 PMID:18765790 positive regulation of mitotic nuclear envelope breakdown GOC:TermGenie positive regulation of mitotic nuclear envelope catabolism GOC:TermGenie positive regulation of mitotic nuclear envelope degradation GOC:TermGenie up regulation of mitotic nuclear envelope breakdown GOC:TermGenie up regulation of mitotic nuclear envelope catabolism GOC:TermGenie up regulation of mitotic nuclear envelope degradation GOC:TermGenie up regulation of mitotic nuclear envelope disassembly GOC:TermGenie up-regulation of mitotic nuclear envelope breakdown GOC:TermGenie up-regulation of mitotic nuclear envelope catabolism GOC:TermGenie up-regulation of mitotic nuclear envelope degradation GOC:TermGenie up-regulation of mitotic nuclear envelope disassembly GOC:TermGenie upregulation of mitotic nuclear envelope breakdown GOC:TermGenie upregulation of mitotic nuclear envelope catabolism GOC:TermGenie upregulation of mitotic nuclear envelope degradation GOC:TermGenie upregulation of mitotic nuclear envelope disassembly GOC:TermGenie activation of mitotic nuclear envelope breakdown GOC:TermGenie activation of mitotic nuclear envelope catabolism GOC:TermGenie activation of mitotic nuclear envelope degradation GOC:TermGenie activation of mitotic nuclear envelope disassembly GOC:TermGenie Any process that modulates the frequency, rate or extent of vascular endothelial cell proliferation. nc 2016-10-17T09:24:17Z biological_process GO:1905562 regulation of vascular endothelial cell proliferation GO:1905562 Any process that modulates the frequency, rate or extent of vascular endothelial cell proliferation. GOC:BHF GOC:BHF_telomere GOC:TermGenie GOC:nc GO_REF:0000058 PMID:23201774 Any process that stops, prevents or reduces the frequency, rate or extent of vascular endothelial cell proliferation. nc 2016-10-17T09:24:26Z down regulation of vascular endothelial cell proliferation down-regulation of vascular endothelial cell proliferation downregulation of vascular endothelial cell proliferation inhibition of vascular endothelial cell proliferation biological_process GO:1905563 negative regulation of vascular endothelial cell proliferation GO:1905563 Any process that stops, prevents or reduces the frequency, rate or extent of vascular endothelial cell proliferation. GOC:BHF GOC:BHF_telomere GOC:TermGenie GOC:nc GO_REF:0000058 PMID:23201774 down regulation of vascular endothelial cell proliferation GOC:TermGenie down-regulation of vascular endothelial cell proliferation GOC:TermGenie downregulation of vascular endothelial cell proliferation GOC:TermGenie inhibition of vascular endothelial cell proliferation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of vascular endothelial cell proliferation. nc 2016-10-17T09:24:35Z up regulation of vascular endothelial cell proliferation up-regulation of vascular endothelial cell proliferation upregulation of vascular endothelial cell proliferation activation of vascular endothelial cell proliferation biological_process GO:1905564 positive regulation of vascular endothelial cell proliferation GO:1905564 Any process that activates or increases the frequency, rate or extent of vascular endothelial cell proliferation. GOC:BHF GOC:BHF_telomere GOC:TermGenie GOC:nc GO_REF:0000058 PMID:23201774 up regulation of vascular endothelial cell proliferation GOC:TermGenie up-regulation of vascular endothelial cell proliferation GOC:TermGenie upregulation of vascular endothelial cell proliferation GOC:TermGenie activation of vascular endothelial cell proliferation GOC:TermGenie Any process that modulates the frequency, rate or extent of presynapse assembly. bc 2016-10-27T16:08:13Z regulation of presynapse biogenesis regulation of presynaptic terminal assembly biological_process GO:1905606 regulation of presynapse assembly GO:1905606 Any process that modulates the frequency, rate or extent of presynapse assembly. GOC:PARL GOC:TermGenie GOC:bc GO_REF:0000058 PMID:25533483 regulation of presynapse biogenesis GOC:TermGenie regulation of presynaptic terminal assembly GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of presynapse assembly. bc 2016-10-27T16:08:20Z down regulation of presynapse assembly down regulation of presynapse biogenesis down regulation of presynaptic terminal assembly down-regulation of presynapse assembly down-regulation of presynapse biogenesis down-regulation of presynaptic terminal assembly downregulation of presynapse assembly downregulation of presynapse biogenesis downregulation of presynaptic terminal assembly negative regulation of presynapse biogenesis negative regulation of presynaptic terminal assembly inhibition of presynapse assembly inhibition of presynapse biogenesis inhibition of presynaptic terminal assembly biological_process GO:1905607 negative regulation of presynapse assembly GO:1905607 Any process that stops, prevents or reduces the frequency, rate or extent of presynapse assembly. GOC:PARL GOC:TermGenie GOC:bc GO_REF:0000058 PMID:25533483 down regulation of presynapse assembly GOC:TermGenie down regulation of presynapse biogenesis GOC:TermGenie down regulation of presynaptic terminal assembly GOC:TermGenie down-regulation of presynapse assembly GOC:TermGenie down-regulation of presynapse biogenesis GOC:TermGenie down-regulation of presynaptic terminal assembly GOC:TermGenie downregulation of presynapse assembly GOC:TermGenie downregulation of presynapse biogenesis GOC:TermGenie downregulation of presynaptic terminal assembly GOC:TermGenie negative regulation of presynapse biogenesis GOC:TermGenie negative regulation of presynaptic terminal assembly GOC:TermGenie inhibition of presynapse assembly GOC:TermGenie inhibition of presynapse biogenesis GOC:TermGenie inhibition of presynaptic terminal assembly GOC:TermGenie Any process that activates or increases the frequency, rate or extent of presynapse assembly. bc 2016-10-27T16:08:28Z positive regulation of presynapse biogenesis positive regulation of presynaptic terminal assembly up regulation of presynapse assembly up regulation of presynapse biogenesis up regulation of presynaptic terminal assembly up-regulation of presynapse assembly up-regulation of presynapse biogenesis up-regulation of presynaptic terminal assembly upregulation of presynapse assembly upregulation of presynapse biogenesis upregulation of presynaptic terminal assembly activation of presynapse assembly activation of presynapse biogenesis activation of presynaptic terminal assembly biological_process GO:1905608 positive regulation of presynapse assembly GO:1905608 Any process that activates or increases the frequency, rate or extent of presynapse assembly. GOC:PARL GOC:TermGenie GOC:bc GO_REF:0000058 PMID:25533483 positive regulation of presynapse biogenesis GOC:TermGenie positive regulation of presynaptic terminal assembly GOC:TermGenie up regulation of presynapse assembly GOC:TermGenie up regulation of presynapse biogenesis GOC:TermGenie up regulation of presynaptic terminal assembly GOC:TermGenie up-regulation of presynapse assembly GOC:TermGenie up-regulation of presynapse biogenesis GOC:TermGenie up-regulation of presynaptic terminal assembly GOC:TermGenie upregulation of presynapse assembly GOC:TermGenie upregulation of presynapse biogenesis GOC:TermGenie upregulation of presynaptic terminal assembly GOC:TermGenie activation of presynapse assembly GOC:TermGenie activation of presynapse biogenesis GOC:TermGenie activation of presynaptic terminal assembly GOC:TermGenie Any process that modulates the frequency, rate or extent of serotonin biosynthetic process. pad 2016-10-31T14:26:20Z regulation of serotonin anabolism regulation of serotonin biosynthesis regulation of serotonin formation regulation of serotonin synthesis biological_process GO:1905627 regulation of serotonin biosynthetic process GO:1905627 Any process that modulates the frequency, rate or extent of serotonin biosynthetic process. GOC:PARL GOC:TermGenie GOC:pad GO_REF:0000058 PMID:25642596 regulation of serotonin anabolism GOC:TermGenie regulation of serotonin biosynthesis GOC:TermGenie regulation of serotonin formation GOC:TermGenie regulation of serotonin synthesis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of serotonin biosynthetic process. pad 2016-10-31T14:26:28Z down regulation of serotonin anabolism down regulation of serotonin biosynthesis down regulation of serotonin biosynthetic process down regulation of serotonin formation down regulation of serotonin synthesis down-regulation of serotonin anabolism down-regulation of serotonin biosynthesis down-regulation of serotonin biosynthetic process down-regulation of serotonin formation down-regulation of serotonin synthesis downregulation of serotonin anabolism downregulation of serotonin biosynthesis downregulation of serotonin biosynthetic process downregulation of serotonin formation downregulation of serotonin synthesis negative regulation of serotonin anabolism negative regulation of serotonin biosynthesis negative regulation of serotonin formation negative regulation of serotonin synthesis inhibition of serotonin anabolism inhibition of serotonin biosynthesis inhibition of serotonin biosynthetic process inhibition of serotonin formation inhibition of serotonin synthesis biological_process GO:1905628 negative regulation of serotonin biosynthetic process GO:1905628 Any process that stops, prevents or reduces the frequency, rate or extent of serotonin biosynthetic process. GOC:PARL GOC:TermGenie GOC:pad GO_REF:0000058 PMID:25642596 down regulation of serotonin anabolism GOC:TermGenie down regulation of serotonin biosynthesis GOC:TermGenie down regulation of serotonin biosynthetic process GOC:TermGenie down regulation of serotonin formation GOC:TermGenie down regulation of serotonin synthesis GOC:TermGenie down-regulation of serotonin anabolism GOC:TermGenie down-regulation of serotonin biosynthesis GOC:TermGenie down-regulation of serotonin biosynthetic process GOC:TermGenie down-regulation of serotonin formation GOC:TermGenie down-regulation of serotonin synthesis GOC:TermGenie downregulation of serotonin anabolism GOC:TermGenie downregulation of serotonin biosynthesis GOC:TermGenie downregulation of serotonin biosynthetic process GOC:TermGenie downregulation of serotonin formation GOC:TermGenie downregulation of serotonin synthesis GOC:TermGenie negative regulation of serotonin anabolism GOC:TermGenie negative regulation of serotonin biosynthesis GOC:TermGenie negative regulation of serotonin formation GOC:TermGenie negative regulation of serotonin synthesis GOC:TermGenie inhibition of serotonin anabolism GOC:TermGenie inhibition of serotonin biosynthesis GOC:TermGenie inhibition of serotonin biosynthetic process GOC:TermGenie inhibition of serotonin formation GOC:TermGenie inhibition of serotonin synthesis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of serotonin biosynthetic process. pad 2016-10-31T14:26:36Z positive regulation of serotonin anabolism positive regulation of serotonin biosynthesis positive regulation of serotonin formation positive regulation of serotonin synthesis up regulation of serotonin anabolism up regulation of serotonin biosynthesis up regulation of serotonin biosynthetic process up regulation of serotonin formation up regulation of serotonin synthesis up-regulation of serotonin anabolism up-regulation of serotonin biosynthesis up-regulation of serotonin biosynthetic process up-regulation of serotonin formation up-regulation of serotonin synthesis upregulation of serotonin anabolism upregulation of serotonin biosynthesis upregulation of serotonin biosynthetic process upregulation of serotonin formation upregulation of serotonin synthesis activation of serotonin anabolism activation of serotonin biosynthesis activation of serotonin biosynthetic process activation of serotonin formation activation of serotonin synthesis biological_process GO:1905629 positive regulation of serotonin biosynthetic process GO:1905629 Any process that activates or increases the frequency, rate or extent of serotonin biosynthetic process. GOC:PARL GOC:TermGenie GOC:pad GO_REF:0000058 PMID:25642596 positive regulation of serotonin anabolism GOC:TermGenie positive regulation of serotonin biosynthesis GOC:TermGenie positive regulation of serotonin formation GOC:TermGenie positive regulation of serotonin synthesis GOC:TermGenie up regulation of serotonin anabolism GOC:TermGenie up regulation of serotonin biosynthesis GOC:TermGenie up regulation of serotonin biosynthetic process GOC:TermGenie up regulation of serotonin formation GOC:TermGenie up regulation of serotonin synthesis GOC:TermGenie up-regulation of serotonin anabolism GOC:TermGenie up-regulation of serotonin biosynthesis GOC:TermGenie up-regulation of serotonin biosynthetic process GOC:TermGenie up-regulation of serotonin formation GOC:TermGenie up-regulation of serotonin synthesis GOC:TermGenie upregulation of serotonin anabolism GOC:TermGenie upregulation of serotonin biosynthesis GOC:TermGenie upregulation of serotonin biosynthetic process GOC:TermGenie upregulation of serotonin formation GOC:TermGenie upregulation of serotonin synthesis GOC:TermGenie activation of serotonin anabolism GOC:TermGenie activation of serotonin biosynthesis GOC:TermGenie activation of serotonin biosynthetic process GOC:TermGenie activation of serotonin formation GOC:TermGenie activation of serotonin synthesis GOC:TermGenie Any process that modulates the frequency, rate or extent of protein localization to chromatin. pga 2016-11-01T16:33:52Z regulation of protein localisation to chromatin biological_process GO:1905634 regulation of protein localization to chromatin GO:1905634 Any process that modulates the frequency, rate or extent of protein localization to chromatin. GOC:TermGenie GO_REF:0000058 PMID:20889714 regulation of protein localisation to chromatin GOC:TermGenie Any process that modulates the frequency, rate or extent of artery morphogenesis. rph 2016-11-09T12:19:37Z regulation of arterial morphogenesis regulation of arteriogenesis biological_process GO:1905651 regulation of artery morphogenesis GO:1905651 Any process that modulates the frequency, rate or extent of artery morphogenesis. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:27389411 regulation of arterial morphogenesis GOC:TermGenie regulation of arteriogenesis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of artery morphogenesis. rph 2016-11-09T12:19:53Z down regulation of arterial morphogenesis down regulation of arteriogenesis down regulation of artery morphogenesis down-regulation of arterial morphogenesis down-regulation of arteriogenesis down-regulation of artery morphogenesis downregulation of arterial morphogenesis downregulation of arteriogenesis downregulation of artery morphogenesis negative regulation of arterial morphogenesis negative regulation of arteriogenesis inhibition of arterial morphogenesis inhibition of arteriogenesis inhibition of artery morphogenesis biological_process GO:1905652 negative regulation of artery morphogenesis GO:1905652 Any process that stops, prevents or reduces the frequency, rate or extent of artery morphogenesis. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:27389411 down regulation of arterial morphogenesis GOC:TermGenie down regulation of arteriogenesis GOC:TermGenie down regulation of artery morphogenesis GOC:TermGenie down-regulation of arterial morphogenesis GOC:TermGenie down-regulation of arteriogenesis GOC:TermGenie down-regulation of artery morphogenesis GOC:TermGenie downregulation of arterial morphogenesis GOC:TermGenie downregulation of arteriogenesis GOC:TermGenie downregulation of artery morphogenesis GOC:TermGenie negative regulation of arterial morphogenesis GOC:TermGenie negative regulation of arteriogenesis GOC:TermGenie inhibition of arterial morphogenesis GOC:TermGenie inhibition of arteriogenesis GOC:TermGenie inhibition of artery morphogenesis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of artery morphogenesis. rph 2016-11-09T12:20:01Z positive regulation of arterial morphogenesis positive regulation of arteriogenesis up regulation of arterial morphogenesis up regulation of arteriogenesis up regulation of artery morphogenesis up-regulation of arterial morphogenesis up-regulation of arteriogenesis up-regulation of artery morphogenesis upregulation of arterial morphogenesis upregulation of arteriogenesis upregulation of artery morphogenesis activation of arterial morphogenesis activation of arteriogenesis activation of artery morphogenesis biological_process GO:1905653 positive regulation of artery morphogenesis GO:1905653 Any process that activates or increases the frequency, rate or extent of artery morphogenesis. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:27389411 positive regulation of arterial morphogenesis GOC:TermGenie positive regulation of arteriogenesis GOC:TermGenie up regulation of arterial morphogenesis GOC:TermGenie up regulation of arteriogenesis GOC:TermGenie up regulation of artery morphogenesis GOC:TermGenie up-regulation of arterial morphogenesis GOC:TermGenie up-regulation of arteriogenesis GOC:TermGenie up-regulation of artery morphogenesis GOC:TermGenie upregulation of arterial morphogenesis GOC:TermGenie upregulation of arteriogenesis GOC:TermGenie upregulation of artery morphogenesis GOC:TermGenie activation of arterial morphogenesis GOC:TermGenie activation of arteriogenesis GOC:TermGenie activation of artery morphogenesis GOC:TermGenie The disaggregation of a nucleus into its constituent components. pr 2016-11-14T13:38:57Z cell nucleus disassembly biological_process GO:1905690 nucleus disassembly GO:1905690 The disaggregation of a nucleus into its constituent components. GOC:TermGenie GOC:autophagy GOC:pr GO_REF:0000079 cell nucleus disassembly GOC:TermGenie Any microtubule bundle that is part of a cytoplasm. mah 2016-11-24T16:52:02Z microtubule bundle of cytoplasm microtubule fascicle of cytoplasm cellular_component GO:1905720 cytoplasmic microtubule bundle GO:1905720 Any microtubule bundle that is part of a cytoplasm. GOC:TermGenie GO_REF:0000064 PMID:11007487 PMID:26124291 microtubule bundle of cytoplasm GOC:TermGenie microtubule fascicle of cytoplasm GOC:TermGenie A process in which a protein is transported to, or maintained in, a location within a cytoplasmic microtubule. mah 2016-12-12T15:31:07Z protein localisation to cytoplasmic microtubule biological_process GO:1905755 protein localization to cytoplasmic microtubule GO:1905755 A process in which a protein is transported to, or maintained in, a location within a cytoplasmic microtubule. GOC:TermGenie GO_REF:0000087 PMID:15177031 protein localisation to cytoplasmic microtubule GOC:TermGenie Any process that modulates the frequency, rate or extent of mesodermal cell differentiation. rph 2016-12-21T12:44:13Z regulation of mesoderm cell differentiation biological_process GO:1905770 regulation of mesodermal cell differentiation GO:1905770 Any process that modulates the frequency, rate or extent of mesodermal cell differentiation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:23765923 regulation of mesoderm cell differentiation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of mesodermal cell differentiation. rph 2016-12-21T12:44:23Z down regulation of mesoderm cell differentiation down regulation of mesodermal cell differentiation down-regulation of mesoderm cell differentiation down-regulation of mesodermal cell differentiation downregulation of mesoderm cell differentiation downregulation of mesodermal cell differentiation negative regulation of mesoderm cell differentiation inhibition of mesoderm cell differentiation inhibition of mesodermal cell differentiation biological_process GO:1905771 negative regulation of mesodermal cell differentiation GO:1905771 Any process that stops, prevents or reduces the frequency, rate or extent of mesodermal cell differentiation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:23765923 down regulation of mesoderm cell differentiation GOC:TermGenie down regulation of mesodermal cell differentiation GOC:TermGenie down-regulation of mesoderm cell differentiation GOC:TermGenie down-regulation of mesodermal cell differentiation GOC:TermGenie downregulation of mesoderm cell differentiation GOC:TermGenie downregulation of mesodermal cell differentiation GOC:TermGenie negative regulation of mesoderm cell differentiation GOC:TermGenie inhibition of mesoderm cell differentiation GOC:TermGenie inhibition of mesodermal cell differentiation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of mesodermal cell differentiation. rph 2016-12-21T12:44:32Z positive regulation of mesoderm cell differentiation up regulation of mesoderm cell differentiation up regulation of mesodermal cell differentiation up-regulation of mesoderm cell differentiation up-regulation of mesodermal cell differentiation upregulation of mesoderm cell differentiation upregulation of mesodermal cell differentiation activation of mesoderm cell differentiation activation of mesodermal cell differentiation biological_process GO:1905772 positive regulation of mesodermal cell differentiation GO:1905772 Any process that activates or increases the frequency, rate or extent of mesodermal cell differentiation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:23765923 positive regulation of mesoderm cell differentiation GOC:TermGenie up regulation of mesoderm cell differentiation GOC:TermGenie up regulation of mesodermal cell differentiation GOC:TermGenie up-regulation of mesoderm cell differentiation GOC:TermGenie up-regulation of mesodermal cell differentiation GOC:TermGenie upregulation of mesoderm cell differentiation GOC:TermGenie upregulation of mesodermal cell differentiation GOC:TermGenie activation of mesoderm cell differentiation GOC:TermGenie activation of mesodermal cell differentiation GOC:TermGenie Any process that modulates the frequency, rate or extent of synapse pruning. tb 2017-01-11T22:03:15Z regulation of synapse clearance regulation of synapse elimination regulation of synapse removal biological_process GO:1905806 regulation of synapse pruning GO:1905806 Any process that modulates the frequency, rate or extent of synapse pruning. GOC:TermGenie GO_REF:0000058 PMID:27779093 Any process that stops, prevents or reduces the frequency, rate or extent of synapse pruning. tb 2017-01-11T22:03:24Z regulation of synapse clearance regulation of synapse disassembly regulation of synapse elimination regulation of synapse removal down regulation of synapse disassembly down-regulation of synapse disassembly downregulation of synapse disassembly inhibition of synapse disassembly biological_process GO:1905807 negative regulation of synapse pruning GO:1905807 Any process that stops, prevents or reduces the frequency, rate or extent of synapse pruning. GOC:TermGenie GO_REF:0000058 PMID:27779093 down regulation of synapse disassembly GOC:TermGenie down-regulation of synapse disassembly GOC:TermGenie downregulation of synapse disassembly GOC:TermGenie inhibition of synapse disassembly GOC:TermGenie Any process that activates or increases the frequency, rate or extent of synapse pruning. tb 2017-01-11T22:03:33Z regulation of synapse clearance regulation of synapse disassembly regulation of synapse elimination regulation of synapse removal up regulation of synapse disassembly up-regulation of synapse disassembly upregulation of synapse disassembly activation of synapse disassembly biological_process GO:1905808 positive regulation of synapse pruning GO:1905808 Any process that activates or increases the frequency, rate or extent of synapse pruning. GOC:TermGenie GO_REF:0000058 PMID:27779093 up regulation of synapse disassembly GOC:TermGenie up-regulation of synapse disassembly GOC:TermGenie upregulation of synapse disassembly GOC:TermGenie activation of synapse disassembly GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of synapse organization. tb 2017-01-11T22:03:41Z down regulation of synapse development down regulation of synapse organisation down regulation of synapse organization down-regulation of synapse development down-regulation of synapse organisation down-regulation of synapse organization downregulation of synapse development downregulation of synapse organisation downregulation of synapse organization negative regulation of synapse development negative regulation of synapse organisation inhibition of synapse development inhibition of synapse organisation inhibition of synapse organization biological_process down regulation of synapse morphogenesis down regulation of synapse organization and biogenesis down-regulation of synapse morphogenesis down-regulation of synapse organization and biogenesis downregulation of synapse morphogenesis downregulation of synapse organization and biogenesis inhibition of synapse morphogenesis inhibition of synapse organization and biogenesis negative regulation of synapse morphogenesis negative regulation of synapse organization and biogenesis GO:1905809 negative regulation of synapse organization GO:1905809 Any process that stops, prevents or reduces the frequency, rate or extent of synapse organization. GOC:TermGenie GO_REF:0000058 PMID:27779093 down regulation of synapse development GOC:TermGenie down regulation of synapse organisation GOC:TermGenie down regulation of synapse organization GOC:TermGenie down-regulation of synapse development GOC:TermGenie down-regulation of synapse organisation GOC:TermGenie down-regulation of synapse organization GOC:TermGenie downregulation of synapse development GOC:TermGenie downregulation of synapse organisation GOC:TermGenie downregulation of synapse organization GOC:TermGenie negative regulation of synapse development GOC:TermGenie negative regulation of synapse organisation GOC:TermGenie inhibition of synapse development GOC:TermGenie inhibition of synapse organisation GOC:TermGenie inhibition of synapse organization GOC:TermGenie down regulation of synapse morphogenesis GOC:TermGenie down regulation of synapse organization and biogenesis GOC:TermGenie down-regulation of synapse morphogenesis GOC:TermGenie down-regulation of synapse organization and biogenesis GOC:TermGenie downregulation of synapse morphogenesis GOC:TermGenie downregulation of synapse organization and biogenesis GOC:TermGenie inhibition of synapse morphogenesis GOC:TermGenie inhibition of synapse organization and biogenesis GOC:TermGenie negative regulation of synapse morphogenesis GOC:TermGenie negative regulation of synapse organization and biogenesis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of chromosome condensation. bhm 2017-01-13T14:13:44Z positive regulation of eukaryotic chromosome condensation positive regulation of nuclear chromosome condensation up regulation of chromosome condensation up regulation of eukaryotic chromosome condensation up regulation of nuclear chromosome condensation up-regulation of chromosome condensation up-regulation of eukaryotic chromosome condensation up-regulation of nuclear chromosome condensation upregulation of chromosome condensation upregulation of eukaryotic chromosome condensation upregulation of nuclear chromosome condensation activation of chromosome condensation activation of eukaryotic chromosome condensation activation of nuclear chromosome condensation biological_process GO:1905821 positive regulation of chromosome condensation GO:1905821 Any process that activates or increases the frequency, rate or extent of chromosome condensation. GOC:TermGenie GOC:bhm GO_REF:0000058 PMID:17268547 positive regulation of eukaryotic chromosome condensation GOC:TermGenie positive regulation of nuclear chromosome condensation GOC:TermGenie up regulation of chromosome condensation GOC:TermGenie up regulation of eukaryotic chromosome condensation GOC:TermGenie up regulation of nuclear chromosome condensation GOC:TermGenie up-regulation of chromosome condensation GOC:TermGenie up-regulation of eukaryotic chromosome condensation GOC:TermGenie up-regulation of nuclear chromosome condensation GOC:TermGenie upregulation of chromosome condensation GOC:TermGenie upregulation of eukaryotic chromosome condensation GOC:TermGenie upregulation of nuclear chromosome condensation GOC:TermGenie activation of chromosome condensation GOC:TermGenie activation of eukaryotic chromosome condensation GOC:TermGenie activation of nuclear chromosome condensation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of microtubule nucleation. hbye 2017-01-17T12:00:56Z down regulation of microtubule nucleation down-regulation of microtubule nucleation downregulation of microtubule nucleation inhibition of microtubule nucleation biological_process GO:1905833 negative regulation of microtubule nucleation GO:1905833 Any process that stops, prevents or reduces the frequency, rate or extent of microtubule nucleation. GOC:TermGenie GO_REF:0000058 PMID:27689799 down regulation of microtubule nucleation GOC:TermGenie down-regulation of microtubule nucleation GOC:TermGenie downregulation of microtubule nucleation GOC:TermGenie inhibition of microtubule nucleation GOC:TermGenie Any process that modulates the frequency, rate or extent of protein localization to cell leading edge. sl 2017-01-27T19:34:55Z regulation of protein localisation in cell leading edge regulation of protein localisation to cell leading edge regulation of protein localization in cell leading edge biological_process GO:1905871 regulation of protein localization to cell leading edge GO:1905871 Any process that modulates the frequency, rate or extent of protein localization to cell leading edge. GOC:TermGenie GO_REF:0000058 PMID:26324884 regulation of protein localisation in cell leading edge GOC:TermGenie regulation of protein localisation to cell leading edge GOC:TermGenie regulation of protein localization in cell leading edge GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell leading edge. sl 2017-01-27T19:35:04Z down regulation of protein localisation in cell leading edge down regulation of protein localisation to cell leading edge down regulation of protein localization in cell leading edge down regulation of protein localization to cell leading edge down-regulation of protein localisation in cell leading edge down-regulation of protein localisation to cell leading edge down-regulation of protein localization in cell leading edge down-regulation of protein localization to cell leading edge downregulation of protein localisation in cell leading edge downregulation of protein localisation to cell leading edge downregulation of protein localization in cell leading edge downregulation of protein localization to cell leading edge negative regulation of protein localisation in cell leading edge negative regulation of protein localisation to cell leading edge negative regulation of protein localization in cell leading edge inhibition of protein localisation in cell leading edge inhibition of protein localisation to cell leading edge inhibition of protein localization in cell leading edge inhibition of protein localization to cell leading edge biological_process GO:1905872 negative regulation of protein localization to cell leading edge GO:1905872 Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell leading edge. GOC:TermGenie GO_REF:0000058 PMID:26324884 down regulation of protein localisation in cell leading edge GOC:TermGenie down regulation of protein localisation to cell leading edge GOC:TermGenie down regulation of protein localization in cell leading edge GOC:TermGenie down regulation of protein localization to cell leading edge GOC:TermGenie down-regulation of protein localisation in cell leading edge GOC:TermGenie down-regulation of protein localisation to cell leading edge GOC:TermGenie down-regulation of protein localization in cell leading edge GOC:TermGenie down-regulation of protein localization to cell leading edge GOC:TermGenie downregulation of protein localisation in cell leading edge GOC:TermGenie downregulation of protein localisation to cell leading edge GOC:TermGenie downregulation of protein localization in cell leading edge GOC:TermGenie downregulation of protein localization to cell leading edge GOC:TermGenie negative regulation of protein localisation in cell leading edge GOC:TermGenie negative regulation of protein localisation to cell leading edge GOC:TermGenie negative regulation of protein localization in cell leading edge GOC:TermGenie inhibition of protein localisation in cell leading edge GOC:TermGenie inhibition of protein localisation to cell leading edge GOC:TermGenie inhibition of protein localization in cell leading edge GOC:TermGenie inhibition of protein localization to cell leading edge GOC:TermGenie Any process that activates or increases the frequency, rate or extent of protein localization to cell leading edge. sl 2017-01-27T19:35:13Z positive regulation of protein localisation in cell leading edge positive regulation of protein localisation to cell leading edge positive regulation of protein localization in cell leading edge up regulation of protein localisation in cell leading edge up regulation of protein localisation to cell leading edge up regulation of protein localization in cell leading edge up regulation of protein localization to cell leading edge up-regulation of protein localisation in cell leading edge up-regulation of protein localisation to cell leading edge up-regulation of protein localization in cell leading edge up-regulation of protein localization to cell leading edge upregulation of protein localisation in cell leading edge upregulation of protein localisation to cell leading edge upregulation of protein localization in cell leading edge upregulation of protein localization to cell leading edge activation of protein localisation in cell leading edge activation of protein localisation to cell leading edge activation of protein localization in cell leading edge activation of protein localization to cell leading edge biological_process GO:1905873 positive regulation of protein localization to cell leading edge GO:1905873 Any process that activates or increases the frequency, rate or extent of protein localization to cell leading edge. GOC:TermGenie GO_REF:0000058 PMID:26324884 positive regulation of protein localisation in cell leading edge GOC:TermGenie positive regulation of protein localisation to cell leading edge GOC:TermGenie positive regulation of protein localization in cell leading edge GOC:TermGenie up regulation of protein localisation in cell leading edge GOC:TermGenie up regulation of protein localisation to cell leading edge GOC:TermGenie up regulation of protein localization in cell leading edge GOC:TermGenie up regulation of protein localization to cell leading edge GOC:TermGenie up-regulation of protein localisation in cell leading edge GOC:TermGenie up-regulation of protein localisation to cell leading edge GOC:TermGenie up-regulation of protein localization in cell leading edge GOC:TermGenie up-regulation of protein localization to cell leading edge GOC:TermGenie upregulation of protein localisation in cell leading edge GOC:TermGenie upregulation of protein localisation to cell leading edge GOC:TermGenie upregulation of protein localization in cell leading edge GOC:TermGenie upregulation of protein localization to cell leading edge GOC:TermGenie activation of protein localisation in cell leading edge GOC:TermGenie activation of protein localisation to cell leading edge GOC:TermGenie activation of protein localization in cell leading edge GOC:TermGenie activation of protein localization to cell leading edge GOC:TermGenie Any process that modulates the frequency, rate or extent of oogenesis. hbye 2017-01-31T09:31:05Z regulation of ovum development biological_process GO:1905879 regulation of oogenesis GO:1905879 Any process that modulates the frequency, rate or extent of oogenesis. GOC:TermGenie GO_REF:0000058 PMID:26434723 regulation of ovum development GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of oogenesis. hbye 2017-01-31T09:31:15Z down regulation of oogenesis down regulation of ovum development down-regulation of oogenesis down-regulation of ovum development downregulation of oogenesis downregulation of ovum development negative regulation of ovum development inhibition of oogenesis inhibition of ovum development biological_process GO:1905880 negative regulation of oogenesis GO:1905880 Any process that stops, prevents or reduces the frequency, rate or extent of oogenesis. GOC:TermGenie GO_REF:0000058 PMID:26434723 down regulation of oogenesis GOC:TermGenie down regulation of ovum development GOC:TermGenie down-regulation of oogenesis GOC:TermGenie down-regulation of ovum development GOC:TermGenie downregulation of oogenesis GOC:TermGenie downregulation of ovum development GOC:TermGenie negative regulation of ovum development GOC:TermGenie inhibition of oogenesis GOC:TermGenie inhibition of ovum development GOC:TermGenie Any process that activates or increases the frequency, rate or extent of oogenesis. hbye 2017-01-31T09:31:23Z positive regulation of ovum development up regulation of oogenesis up regulation of ovum development up-regulation of oogenesis up-regulation of ovum development upregulation of oogenesis upregulation of ovum development activation of oogenesis activation of ovum development biological_process GO:1905881 positive regulation of oogenesis GO:1905881 Any process that activates or increases the frequency, rate or extent of oogenesis. GOC:TermGenie GO_REF:0000058 PMID:26434723 positive regulation of ovum development GOC:TermGenie up regulation of oogenesis GOC:TermGenie up regulation of ovum development GOC:TermGenie up-regulation of oogenesis GOC:TermGenie up-regulation of ovum development GOC:TermGenie upregulation of oogenesis GOC:TermGenie upregulation of ovum development GOC:TermGenie activation of oogenesis GOC:TermGenie activation of ovum development GOC:TermGenie Any process that modulates the frequency, rate or extent of smooth muscle tissue development. bhm 2017-02-01T14:31:16Z biological_process GO:1905899 regulation of smooth muscle tissue development GO:1905899 Any process that modulates the frequency, rate or extent of smooth muscle tissue development. GOC:TermGenie GOC:bhm GO_REF:0000058 PMID:14709716 Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle tissue development. bhm 2017-02-01T14:31:24Z down regulation of smooth muscle tissue development down-regulation of smooth muscle tissue development downregulation of smooth muscle tissue development inhibition of smooth muscle tissue development biological_process GO:1905900 negative regulation of smooth muscle tissue development GO:1905900 Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle tissue development. GOC:TermGenie GOC:bhm GO_REF:0000058 PMID:14709716 down regulation of smooth muscle tissue development GOC:TermGenie down-regulation of smooth muscle tissue development GOC:TermGenie downregulation of smooth muscle tissue development GOC:TermGenie inhibition of smooth muscle tissue development GOC:TermGenie Any process that activates or increases the frequency, rate or extent of smooth muscle tissue development. bhm 2017-02-01T14:31:33Z up regulation of smooth muscle tissue development up-regulation of smooth muscle tissue development upregulation of smooth muscle tissue development activation of smooth muscle tissue development biological_process GO:1905901 positive regulation of smooth muscle tissue development GO:1905901 Any process that activates or increases the frequency, rate or extent of smooth muscle tissue development. GOC:TermGenie GOC:bhm GO_REF:0000058 PMID:14709716 up regulation of smooth muscle tissue development GOC:TermGenie up-regulation of smooth muscle tissue development GOC:TermGenie upregulation of smooth muscle tissue development GOC:TermGenie activation of smooth muscle tissue development GOC:TermGenie Any process that modulates the frequency, rate or extent of mesoderm formation. rph 2017-02-03T12:28:20Z biological_process GO:1905902 regulation of mesoderm formation GO:1905902 Any process that modulates the frequency, rate or extent of mesoderm formation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:23939491 Any process that stops, prevents or reduces the frequency, rate or extent of mesoderm formation. rph 2017-02-03T12:28:29Z down regulation of mesoderm formation down-regulation of mesoderm formation downregulation of mesoderm formation inhibition of mesoderm formation biological_process GO:1905903 negative regulation of mesoderm formation GO:1905903 Any process that stops, prevents or reduces the frequency, rate or extent of mesoderm formation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:23939491 down regulation of mesoderm formation GOC:TermGenie down-regulation of mesoderm formation GOC:TermGenie downregulation of mesoderm formation GOC:TermGenie inhibition of mesoderm formation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of mesoderm formation. rph 2017-02-03T12:28:38Z up regulation of mesoderm formation up-regulation of mesoderm formation upregulation of mesoderm formation activation of mesoderm formation biological_process GO:1905904 positive regulation of mesoderm formation GO:1905904 Any process that activates or increases the frequency, rate or extent of mesoderm formation. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:23939491 up regulation of mesoderm formation GOC:TermGenie up-regulation of mesoderm formation GOC:TermGenie upregulation of mesoderm formation GOC:TermGenie activation of mesoderm formation GOC:TermGenie Any process that modulates the frequency, rate or extent of acetylcholine biosynthetic process. bc 2017-02-08T13:08:30Z regulation of acetylcholine anabolism regulation of acetylcholine biosynthesis regulation of acetylcholine formation regulation of acetylcholine synthesis biological_process GO:1905921 regulation of acetylcholine biosynthetic process GO:1905921 Any process that modulates the frequency, rate or extent of acetylcholine biosynthetic process. GOC:TermGenie GOC:aruk GOC:bc GO_REF:0000058 PMID:20164328 regulation of acetylcholine anabolism GOC:TermGenie regulation of acetylcholine biosynthesis GOC:TermGenie regulation of acetylcholine formation GOC:TermGenie regulation of acetylcholine synthesis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of acetylcholine biosynthetic process. bc 2017-02-08T13:08:39Z down regulation of acetylcholine anabolism down regulation of acetylcholine biosynthesis down regulation of acetylcholine biosynthetic process down regulation of acetylcholine formation down regulation of acetylcholine synthesis down-regulation of acetylcholine anabolism down-regulation of acetylcholine biosynthesis down-regulation of acetylcholine biosynthetic process down-regulation of acetylcholine formation down-regulation of acetylcholine synthesis downregulation of acetylcholine anabolism downregulation of acetylcholine biosynthesis downregulation of acetylcholine biosynthetic process downregulation of acetylcholine formation downregulation of acetylcholine synthesis negative regulation of acetylcholine anabolism negative regulation of acetylcholine biosynthesis negative regulation of acetylcholine formation negative regulation of acetylcholine synthesis inhibition of acetylcholine anabolism inhibition of acetylcholine biosynthesis inhibition of acetylcholine biosynthetic process inhibition of acetylcholine formation inhibition of acetylcholine synthesis biological_process GO:1905922 negative regulation of acetylcholine biosynthetic process GO:1905922 Any process that stops, prevents or reduces the frequency, rate or extent of acetylcholine biosynthetic process. GOC:TermGenie GOC:aruk GOC:bc GO_REF:0000058 PMID:20164328 down regulation of acetylcholine anabolism GOC:TermGenie down regulation of acetylcholine biosynthesis GOC:TermGenie down regulation of acetylcholine biosynthetic process GOC:TermGenie down regulation of acetylcholine formation GOC:TermGenie down regulation of acetylcholine synthesis GOC:TermGenie down-regulation of acetylcholine anabolism GOC:TermGenie down-regulation of acetylcholine biosynthesis GOC:TermGenie down-regulation of acetylcholine biosynthetic process GOC:TermGenie down-regulation of acetylcholine formation GOC:TermGenie down-regulation of acetylcholine synthesis GOC:TermGenie downregulation of acetylcholine anabolism GOC:TermGenie downregulation of acetylcholine biosynthesis GOC:TermGenie downregulation of acetylcholine biosynthetic process GOC:TermGenie downregulation of acetylcholine formation GOC:TermGenie downregulation of acetylcholine synthesis GOC:TermGenie negative regulation of acetylcholine anabolism GOC:TermGenie negative regulation of acetylcholine biosynthesis GOC:TermGenie negative regulation of acetylcholine formation GOC:TermGenie negative regulation of acetylcholine synthesis GOC:TermGenie inhibition of acetylcholine anabolism GOC:TermGenie inhibition of acetylcholine biosynthesis GOC:TermGenie inhibition of acetylcholine biosynthetic process GOC:TermGenie inhibition of acetylcholine formation GOC:TermGenie inhibition of acetylcholine synthesis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of acetylcholine biosynthetic process. bc 2017-02-08T13:08:48Z positive regulation of acetylcholine anabolism positive regulation of acetylcholine biosynthesis positive regulation of acetylcholine formation positive regulation of acetylcholine synthesis up regulation of acetylcholine anabolism up regulation of acetylcholine biosynthesis up regulation of acetylcholine biosynthetic process up regulation of acetylcholine formation up regulation of acetylcholine synthesis up-regulation of acetylcholine anabolism up-regulation of acetylcholine biosynthesis up-regulation of acetylcholine biosynthetic process up-regulation of acetylcholine formation up-regulation of acetylcholine synthesis upregulation of acetylcholine anabolism upregulation of acetylcholine biosynthesis upregulation of acetylcholine biosynthetic process upregulation of acetylcholine formation upregulation of acetylcholine synthesis activation of acetylcholine anabolism activation of acetylcholine biosynthesis activation of acetylcholine biosynthetic process activation of acetylcholine formation activation of acetylcholine synthesis biological_process GO:1905923 positive regulation of acetylcholine biosynthetic process GO:1905923 Any process that activates or increases the frequency, rate or extent of acetylcholine biosynthetic process. GOC:TermGenie GOC:aruk GOC:bc GO_REF:0000058 PMID:20164328 positive regulation of acetylcholine anabolism GOC:TermGenie positive regulation of acetylcholine biosynthesis GOC:TermGenie positive regulation of acetylcholine formation GOC:TermGenie positive regulation of acetylcholine synthesis GOC:TermGenie up regulation of acetylcholine anabolism GOC:TermGenie up regulation of acetylcholine biosynthesis GOC:TermGenie up regulation of acetylcholine biosynthetic process GOC:TermGenie up regulation of acetylcholine formation GOC:TermGenie up regulation of acetylcholine synthesis GOC:TermGenie up-regulation of acetylcholine anabolism GOC:TermGenie up-regulation of acetylcholine biosynthesis GOC:TermGenie up-regulation of acetylcholine biosynthetic process GOC:TermGenie up-regulation of acetylcholine formation GOC:TermGenie up-regulation of acetylcholine synthesis GOC:TermGenie upregulation of acetylcholine anabolism GOC:TermGenie upregulation of acetylcholine biosynthesis GOC:TermGenie upregulation of acetylcholine biosynthetic process GOC:TermGenie upregulation of acetylcholine formation GOC:TermGenie upregulation of acetylcholine synthesis GOC:TermGenie activation of acetylcholine anabolism GOC:TermGenie activation of acetylcholine biosynthesis GOC:TermGenie activation of acetylcholine biosynthetic process GOC:TermGenie activation of acetylcholine formation GOC:TermGenie activation of acetylcholine synthesis GOC:TermGenie Any process that modulates the frequency, rate or extent of germ cell proliferation. hbye 2017-02-09T14:51:31Z biological_process GO:1905936 regulation of germ cell proliferation GO:1905936 Any process that modulates the frequency, rate or extent of germ cell proliferation. GOC:TermGenie GO_REF:0000058 PMID:15342467 Any process that stops, prevents or reduces the frequency, rate or extent of germ cell proliferation. hbye 2017-02-09T14:51:41Z down regulation of germ cell proliferation down-regulation of germ cell proliferation downregulation of germ cell proliferation inhibition of germ cell proliferation biological_process GO:1905937 negative regulation of germ cell proliferation GO:1905937 Any process that stops, prevents or reduces the frequency, rate or extent of germ cell proliferation. GOC:TermGenie GO_REF:0000058 PMID:15342467 down regulation of germ cell proliferation GOC:TermGenie down-regulation of germ cell proliferation GOC:TermGenie downregulation of germ cell proliferation GOC:TermGenie inhibition of germ cell proliferation GOC:TermGenie Any process that activates or increases the frequency, rate or extent of germ cell proliferation. hbye 2017-02-09T14:51:51Z up regulation of germ cell proliferation up-regulation of germ cell proliferation upregulation of germ cell proliferation activation of germ cell proliferation biological_process GO:1905938 positive regulation of germ cell proliferation GO:1905938 Any process that activates or increases the frequency, rate or extent of germ cell proliferation. GOC:TermGenie GO_REF:0000058 PMID:15342467 up regulation of germ cell proliferation GOC:TermGenie up-regulation of germ cell proliferation GOC:TermGenie upregulation of germ cell proliferation GOC:TermGenie activation of germ cell proliferation GOC:TermGenie Any process that modulates the frequency, rate or extent of gonad development. hbye 2017-02-09T17:01:50Z regulation of gonadogenesis biological_process GO:1905939 regulation of gonad development GO:1905939 Any process that modulates the frequency, rate or extent of gonad development. GOC:TermGenie GO_REF:0000058 PMID:15342467 regulation of gonadogenesis GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of gonad development. hbye 2017-02-09T17:01:59Z down regulation of gonad development down regulation of gonadogenesis down-regulation of gonad development down-regulation of gonadogenesis downregulation of gonad development downregulation of gonadogenesis negative regulation of gonadogenesis inhibition of gonad development inhibition of gonadogenesis biological_process GO:1905940 negative regulation of gonad development GO:1905940 Any process that stops, prevents or reduces the frequency, rate or extent of gonad development. GOC:TermGenie GO_REF:0000058 PMID:15342467 down regulation of gonad development GOC:TermGenie down regulation of gonadogenesis GOC:TermGenie down-regulation of gonad development GOC:TermGenie down-regulation of gonadogenesis GOC:TermGenie downregulation of gonad development GOC:TermGenie downregulation of gonadogenesis GOC:TermGenie negative regulation of gonadogenesis GOC:TermGenie inhibition of gonad development GOC:TermGenie inhibition of gonadogenesis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of gonad development. hbye 2017-02-09T17:02:08Z positive regulation of gonadogenesis up regulation of gonad development up regulation of gonadogenesis up-regulation of gonad development up-regulation of gonadogenesis upregulation of gonad development upregulation of gonadogenesis activation of gonad development activation of gonadogenesis biological_process GO:1905941 positive regulation of gonad development GO:1905941 Any process that activates or increases the frequency, rate or extent of gonad development. GOC:TermGenie GO_REF:0000058 PMID:15342467 positive regulation of gonadogenesis GOC:TermGenie up regulation of gonad development GOC:TermGenie up regulation of gonadogenesis GOC:TermGenie up-regulation of gonad development GOC:TermGenie up-regulation of gonadogenesis GOC:TermGenie upregulation of gonad development GOC:TermGenie upregulation of gonadogenesis GOC:TermGenie activation of gonad development GOC:TermGenie activation of gonadogenesis GOC:TermGenie Any process that modulates the frequency, rate or extent of lipid localization. rz 2017-02-21T12:12:22Z regulation of lipid localisation biological_process GO:1905952 regulation of lipid localization GO:1905952 Any process that modulates the frequency, rate or extent of lipid localization. GOC:TermGenie GO_REF:0000058 PMID:17564681 regulation of lipid localisation GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of lipid localization. rz 2017-02-21T12:12:41Z down regulation of lipid localisation down regulation of lipid localization down-regulation of lipid localisation down-regulation of lipid localization downregulation of lipid localisation downregulation of lipid localization negative regulation of lipid localisation inhibition of lipid localisation inhibition of lipid localization biological_process GO:1905953 negative regulation of lipid localization GO:1905953 Any process that stops, prevents or reduces the frequency, rate or extent of lipid localization. GOC:TermGenie GO_REF:0000058 PMID:17564681 down regulation of lipid localisation GOC:TermGenie down regulation of lipid localization GOC:TermGenie down-regulation of lipid localisation GOC:TermGenie down-regulation of lipid localization GOC:TermGenie downregulation of lipid localisation GOC:TermGenie downregulation of lipid localization GOC:TermGenie negative regulation of lipid localisation GOC:TermGenie inhibition of lipid localisation GOC:TermGenie inhibition of lipid localization GOC:TermGenie Any process that activates or increases the frequency, rate or extent of lipid localization. rz 2017-02-21T12:12:49Z positive regulation of lipid localisation up regulation of lipid localisation up regulation of lipid localization up-regulation of lipid localisation up-regulation of lipid localization upregulation of lipid localisation upregulation of lipid localization activation of lipid localisation activation of lipid localization biological_process GO:1905954 positive regulation of lipid localization GO:1905954 Any process that activates or increases the frequency, rate or extent of lipid localization. GOC:TermGenie GO_REF:0000058 PMID:17564681 positive regulation of lipid localisation GOC:TermGenie up regulation of lipid localisation GOC:TermGenie up regulation of lipid localization GOC:TermGenie up-regulation of lipid localisation GOC:TermGenie up-regulation of lipid localization GOC:TermGenie upregulation of lipid localisation GOC:TermGenie upregulation of lipid localization GOC:TermGenie activation of lipid localisation GOC:TermGenie activation of lipid localization GOC:TermGenie Any process that stops, prevents or reduces the frequency, rate or extent of endothelial tube morphogenesis. rph 2017-02-21T15:17:31Z down regulation of endothelial tube morphogenesis down-regulation of endothelial tube morphogenesis downregulation of endothelial tube morphogenesis inhibition of endothelial tube morphogenesis biological_process GO:1905955 negative regulation of endothelial tube morphogenesis GO:1905955 Any process that stops, prevents or reduces the frequency, rate or extent of endothelial tube morphogenesis. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:25961718 down regulation of endothelial tube morphogenesis GOC:TermGenie down-regulation of endothelial tube morphogenesis GOC:TermGenie downregulation of endothelial tube morphogenesis GOC:TermGenie inhibition of endothelial tube morphogenesis GOC:TermGenie Any process that activates or increases the frequency, rate or extent of endothelial tube morphogenesis. rph 2017-02-21T15:17:39Z up regulation of endothelial tube morphogenesis up-regulation of endothelial tube morphogenesis upregulation of endothelial tube morphogenesis activation of endothelial tube morphogenesis biological_process GO:1905956 positive regulation of endothelial tube morphogenesis GO:1905956 Any process that activates or increases the frequency, rate or extent of endothelial tube morphogenesis. GOC:BHF GOC:BHF_miRNA GOC:TermGenie GOC:rph GO_REF:0000058 PMID:25961718 up regulation of endothelial tube morphogenesis GOC:TermGenie up-regulation of endothelial tube morphogenesis GOC:TermGenie upregulation of endothelial tube morphogenesis GOC:TermGenie activation of endothelial tube morphogenesis GOC:TermGenie Any apoptotic process in a retinal cell. pr 2012-12-12T10:15:08Z GO:0046674 biological_process induction of retinal programmed cell death GO:1990009 retinal cell apoptotic process GO:1990009 Any apoptotic process in a retinal cell. GOC:mtg_apoptosis PMID:15558487 PMID:24664675 Any apoptotic process in a compound eye retinal cell. pr 2012-12-12T10:21:07Z biological_process GO:1990010 compound eye retinal cell apoptotic process GO:1990010 Any apoptotic process in a compound eye retinal cell. GOC:mtg_apoptosis PMID:12021768 The directed movement of substances in neuronal dense core vesicles along axonal microtubules towards the presynapse. anterograde dense core granule trafficking anterograde dense core granule transport biological_process GO:1990048 anterograde neuronal dense core vesicle transport GO:1990048 The directed movement of substances in neuronal dense core vesicles along axonal microtubules towards the presynapse. GOC:kmv PMID:23358451 The directed movement of neuronal dense core vesicles along axonal microtubules towards the cell body. pr 2013-02-19T13:31:44Z retrograde dense core granule trafficking retrograde dense core granule transport biological_process GO:1990049 retrograde neuronal dense core vesicle transport GO:1990049 The directed movement of neuronal dense core vesicles along axonal microtubules towards the cell body. GOC:kmv PMID:23358451 PMID:24762653 The process whereby a membrane-bounded vesicle is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. hjd 2013-09-04T21:08:14Z exosomal secretory pathway extracellular vesicular exosome secretion multi-vesicular body fusion with plasma membrane secretion of exosome exosomal protein secretion biological_process GO:1990182 exosomal secretion GO:1990182 The process whereby a membrane-bounded vesicle is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. GOC:hjd PMID:10572093 PMID:12154376 PMID:16773132 PMID:18617898 exosomal secretory pathway PMID:18617898 extracellular vesicular exosome secretion GOC:hjd secretion of exosome PMID:18617898 exosomal protein secretion PMID:18617898 A process in which RNA is transported to and maintained in a part of a chromosome that is organized into chromatin. mah 2014-01-30T15:55:34Z RNA localisation to chromatin biological_process GO:1990280 RNA localization to chromatin GO:1990280 A process in which RNA is transported to and maintained in a part of a chromosome that is organized into chromatin. GOC:dos GOC:mah PMID:22582262 Steps required to transform a dense core granule generated at the trans-Golgi network into a fully formed and transmissible dense core granule. Dense core granule maturation proceeds through clathrin-mediated membrane remodeling events and is essential for efficient processing of cargo within dense core granules as well as for removing factors that might otherwise interfere with dense core granule trafficking and exocytosis. kmv 2014-09-30T20:35:11Z dense core vesicle maturation biological_process GO:1990502 dense core granule maturation GO:1990502 Steps required to transform a dense core granule generated at the trans-Golgi network into a fully formed and transmissible dense core granule. Dense core granule maturation proceeds through clathrin-mediated membrane remodeling events and is essential for efficient processing of cargo within dense core granules as well as for removing factors that might otherwise interfere with dense core granule trafficking and exocytosis. GOC:kmv PMID:22654674 Any process that modulates the frequency, rate or extent of cytoplasmic translational termination. vw 2014-12-10T15:48:55Z biological_process GO:1990580 regulation of cytoplasmic translational termination GO:1990580 Any process that modulates the frequency, rate or extent of cytoplasmic translational termination. PMID:11570975 The flow of blood through the gastric mucosa of an animal, enabling the transport of nutrients and the removal of waste products. sl 2015-06-10T20:11:09Z stomach mucosal blood circulation biological_process GO:1990768 gastric mucosal blood circulation GO:1990768 The flow of blood through the gastric mucosa of an animal, enabling the transport of nutrients and the removal of waste products. PMID:10807413 A process in which a protein is transported to, or maintained in, the cell periphery. 2015-06-18T22:37:39Z biological_process GO:1990778 protein localization to cell periphery GO:1990778 A process in which a protein is transported to, or maintained in, the cell periphery. PMID:18216290 Any process in which the vacuole is transported to, and/or maintained in, a specific location within the cell. mcc 2015-09-10T08:16:02Z maintenance of vacuolar localization maintenance of vacuole localization maintenance of vacuole location maintenance of vacuolar location biological_process GO:1990849 vacuolar localization GO:1990849 Any process in which the vacuole is transported to, and/or maintained in, a specific location within the cell. PMID:26283797 The multiplication or reproduction of acinar cells, resulting in the expansion of a cell population. An acinar cell is a secretory cell that is grouped together with other cells of the same type to form grape-shaped clusters known as acini (singular acinus). sl 2015-09-25T14:26:09Z acinic cell proliferation acinous cell proliferation biological_process GO:1990863 acinar cell proliferation GO:1990863 The multiplication or reproduction of acinar cells, resulting in the expansion of a cell population. An acinar cell is a secretory cell that is grouped together with other cells of the same type to form grape-shaped clusters known as acini (singular acinus). PMID:9788538 The multiplication or reproduction of vascular smooth muscle cells, resulting in the expansion of a cell population. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels. sl 2015-09-29T16:34:59Z VSMC proliferation vascular smooth muscle cell proliferation biological_process GO:1990874 vascular associated smooth muscle cell proliferation GO:1990874 The multiplication or reproduction of vascular smooth muscle cells, resulting in the expansion of a cell population. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels. PMID:23246467 A macromolecular complex that contains both RNA and protein molecules. pr 2015-11-19T12:26:37Z GO:0030529 GO:1990903 Wikipedia:Ribonucleoprotein RNA-protein complex RNP protein-RNA complex extracellular ribonucleoprotein complex intracellular ribonucleoprotein complex cellular_component GO:1990904 ribonucleoprotein complex GO:1990904 A macromolecular complex that contains both RNA and protein molecules. GOC:krc GOC:vesicles The cytoplasm of an ovum. sl 2015-12-10T21:40:16Z cellular_component GO:1990917 ooplasm GO:1990917 The cytoplasm of an ovum. PMID:19022436 Any process that modulates the frequency, rate or extent of multicellular organismal development. tb 2010-08-05T11:25:59Z biological_process GO:2000026 regulation of multicellular organismal development GO:2000026 Any process that modulates the frequency, rate or extent of multicellular organismal development. GOC:obol Any process that modulates the frequency, rate or extent of animal organ morphogenesis. tb 2010-08-05T11:26:27Z biological_process regulation of histogenesis and organogenesis GO:2000027 regulation of animal organ morphogenesis GO:2000027 Any process that modulates the frequency, rate or extent of animal organ morphogenesis. GOC:obol regulation of histogenesis and organogenesis GOC:obol Any process that modulates the frequency, rate or extent of stem cell division. tb 2010-08-05T11:34:53Z regulation of stem cell renewal biological_process GO:2000035 regulation of stem cell division GO:2000035 Any process that modulates the frequency, rate or extent of stem cell division. GOC:obol regulation of stem cell renewal GOC:obol Any process that modulates the frequency, rate or extent of defense response to insect. tb 2010-08-23T09:30:00Z regulation of physiological defense response to insect biological_process GO:2000068 regulation of defense response to insect GO:2000068 Any process that modulates the frequency, rate or extent of defense response to insect. GOC:obol regulation of physiological defense response to insect GOC:obol Any process that modulates the frequency, rate or extent of leukocyte apoptotic process. mah 2010-09-15T01:42:05Z regulation of leukocyte apoptosis biological_process GO:2000106 regulation of leukocyte apoptotic process GO:2000106 Any process that modulates the frequency, rate or extent of leukocyte apoptotic process. GOC:BHF GOC:mtg_apoptosis Any process that stops, prevents, or reduces the frequency, rate or extent of leukocyte apoptotic process. mah 2010-09-15T01:42:09Z negative regulation of leukocyte apoptosis biological_process GO:2000107 negative regulation of leukocyte apoptotic process GO:2000107 Any process that stops, prevents, or reduces the frequency, rate or extent of leukocyte apoptotic process. GOC:BHF GOC:mtg_apoptosis Any process that activates or increases the frequency, rate or extent of leukocyte apoptotic process. mah 2010-09-15T01:42:12Z positive regulation of leukocyte apoptosis biological_process GO:2000108 positive regulation of leukocyte apoptotic process GO:2000108 Any process that activates or increases the frequency, rate or extent of leukocyte apoptotic process. GOC:BHF GOC:mtg_apoptosis Any process that modulates the frequency, rate or extent of establishment of cell polarity. dph 2010-09-16T01:22:36Z regulation of cell polarization biological_process regulation of bud site selection/establishment of cell polarity GO:2000114 regulation of establishment of cell polarity GO:2000114 Any process that modulates the frequency, rate or extent of establishment of cell polarity. GOC:dph regulation of cell polarization GOC:obol regulation of bud site selection/establishment of cell polarity GOC:obol Any process that modulates the frequency, rate or extent of cell proliferation involved in heart morphogenesis. dph 2010-09-29T12:43:53Z biological_process GO:2000136 regulation of cell proliferation involved in heart morphogenesis GO:2000136 Any process that modulates the frequency, rate or extent of cell proliferation involved in heart morphogenesis. GOC:dph Any process that stops, prevents, or reduces the frequency, rate or extent of cell proliferation involved in heart morphogenesis. dph 2010-09-29T12:43:55Z biological_process GO:2000137 negative regulation of cell proliferation involved in heart morphogenesis GO:2000137 Any process that stops, prevents, or reduces the frequency, rate or extent of cell proliferation involved in heart morphogenesis. GOC:dph Any process that activates or increases the frequency, rate or extent of cell proliferation involved in heart morphogenesis. dph 2010-09-29T12:43:57Z biological_process GO:2000138 positive regulation of cell proliferation involved in heart morphogenesis GO:2000138 Any process that activates or increases the frequency, rate or extent of cell proliferation involved in heart morphogenesis. GOC:dph Any process that modulates the frequency, rate or extent of cell motility. mah 2010-10-01T09:41:21Z Reactome:R-HSA-6785631 regulation of cell locomotion regulation of movement of a cell biological_process regulation of cell movement GO:2000145 regulation of cell motility GO:2000145 Any process that modulates the frequency, rate or extent of cell motility. GOC:mah Reactome:R-HSA-6785631 ERBB2 Regulates Cell Motility regulation of cell locomotion GOC:obol regulation of movement of a cell GOC:obol regulation of cell movement GOC:obol Any process that stops, prevents, or reduces the frequency, rate or extent of cell motility. mah 2010-10-01T09:41:26Z negative regulation of cell locomotion negative regulation of movement of a cell biological_process negative regulation of cell movement GO:2000146 negative regulation of cell motility GO:2000146 Any process that stops, prevents, or reduces the frequency, rate or extent of cell motility. GOC:mah negative regulation of cell locomotion GOC:obol negative regulation of movement of a cell GOC:obol negative regulation of cell movement GOC:obol Any process that activates or increases the frequency, rate or extent of cell motility. mah 2010-10-01T09:41:30Z positive regulation of cell locomotion positive regulation of movement of a cell biological_process positive regulation of cell movement GO:2000147 positive regulation of cell motility GO:2000147 Any process that activates or increases the frequency, rate or extent of cell motility. GOC:mah positive regulation of cell locomotion GOC:obol positive regulation of movement of a cell GOC:obol positive regulation of cell movement GOC:obol Any process that activates or increases the frequency, rate or extent of cilium-dependent cell motility. mah 2010-10-04T12:41:05Z biological_process positive regulation of ciliary cell motility GO:2000155 positive regulation of cilium-dependent cell motility GO:2000155 Any process that activates or increases the frequency, rate or extent of cilium-dependent cell motility. GOC:cilia GOC:jl Any process that stops, prevents, or reduces the frequency, rate or extent of dendrite development. rl 2010-10-07T10:53:15Z biological_process GO:2000171 negative regulation of dendrite development GO:2000171 Any process that stops, prevents, or reduces the frequency, rate or extent of dendrite development. GOC:obol Any process that modulates the frequency, rate or extent of branching morphogenesis of a nerve. rl 2010-10-07T12:07:54Z biological_process GO:2000172 regulation of branching morphogenesis of a nerve GO:2000172 Any process that modulates the frequency, rate or extent of branching morphogenesis of a nerve. GOC:BHF Any process that stops, prevents, or reduces the frequency, rate or extent of branching morphogenesis of a nerve. rl 2010-10-07T12:07:56Z biological_process GO:2000173 negative regulation of branching morphogenesis of a nerve GO:2000173 Any process that stops, prevents, or reduces the frequency, rate or extent of branching morphogenesis of a nerve. GOC:BHF Any process that modulates the frequency, rate or extent of neural precursor cell proliferation. dph 2010-10-13T12:40:41Z biological_process GO:2000177 regulation of neural precursor cell proliferation GO:2000177 Any process that modulates the frequency, rate or extent of neural precursor cell proliferation. GOC:dph GOC:yaf Any process that stops, prevents, or reduces the frequency, rate or extent of neural precursor cell proliferation. dph 2010-10-13T12:40:43Z biological_process GO:2000178 negative regulation of neural precursor cell proliferation GO:2000178 Any process that stops, prevents, or reduces the frequency, rate or extent of neural precursor cell proliferation. GOC:dph GOC:yaf Any process that activates or increases the frequency, rate or extent of neural precursor cell proliferation. dph 2010-10-13T12:40:45Z biological_process GO:2000179 positive regulation of neural precursor cell proliferation GO:2000179 Any process that activates or increases the frequency, rate or extent of neural precursor cell proliferation. GOC:dph GOC:yaf Any process that stops, prevents, or reduces the frequency, rate or extent of blood vessel morphogenesis. dph 2010-10-13T12:46:31Z biological_process GO:2000181 negative regulation of blood vessel morphogenesis GO:2000181 Any process that stops, prevents, or reduces the frequency, rate or extent of blood vessel morphogenesis. GOC:dph GOC:yaf Any process that modulates the frequency, rate or extent of female gonad development. yaf 2010-10-19T10:45:34Z regulation of ovarian development regulation of ovary development biological_process GO:2000194 regulation of female gonad development GO:2000194 Any process that modulates the frequency, rate or extent of female gonad development. GOC:obol regulation of ovarian development GOC:obol regulation of ovary development GOC:obol Any process that stops, prevents, or reduces the frequency, rate or extent of female gonad development. yaf 2010-10-19T10:45:38Z negative regulation of ovarian development negative regulation of ovary development biological_process GO:2000195 negative regulation of female gonad development GO:2000195 Any process that stops, prevents, or reduces the frequency, rate or extent of female gonad development. GOC:obol negative regulation of ovarian development GOC:obol negative regulation of ovary development GOC:obol Any process that activates or increases the frequency, rate or extent of female gonad development. yaf 2010-10-19T10:45:41Z positive regulation of ovarian development positive regulation of ovary development biological_process GO:2000196 positive regulation of female gonad development GO:2000196 Any process that activates or increases the frequency, rate or extent of female gonad development. GOC:obol positive regulation of ovarian development GOC:obol positive regulation of ovary development GOC:obol Any process that modulates the frequency, rate or extent of reproductive process. mah 2010-11-10T02:44:02Z biological_process GO:2000241 regulation of reproductive process GO:2000241 Any process that modulates the frequency, rate or extent of reproductive process. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of reproductive process. mah 2010-11-10T02:44:05Z biological_process GO:2000242 negative regulation of reproductive process GO:2000242 Any process that stops, prevents, or reduces the frequency, rate or extent of reproductive process. GOC:mah Any process that activates or increases the frequency, rate or extent of reproductive process. mah 2010-11-10T02:44:08Z biological_process GO:2000243 positive regulation of reproductive process GO:2000243 Any process that activates or increases the frequency, rate or extent of reproductive process. GOC:mah Any process that stops, prevents, or reduces the frequency, rate or extent of establishment or maintenance of neuroblast polarity. vw 2010-11-11T11:40:34Z negative regulation of establishment and/or maintenance of neuroblast cell polarity biological_process GO:2000248 negative regulation of establishment or maintenance of neuroblast polarity GO:2000248 Any process that stops, prevents, or reduces the frequency, rate or extent of establishment or maintenance of neuroblast polarity. GOC:obol negative regulation of establishment and/or maintenance of neuroblast cell polarity GOC:obol Any process that modulates the frequency, rate or extent of fibroblast apoptotic process. jl 2010-11-23T01:07:23Z regulation of fibroblast apoptosis biological_process GO:2000269 regulation of fibroblast apoptotic process GO:2000269 Any process that modulates the frequency, rate or extent of fibroblast apoptotic process. GOC:mtg_apoptosis GOC:obol GOC:yaf Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast apoptotic process. jl 2010-11-23T01:07:27Z negative regulation of fibroblast apoptosis biological_process GO:2000270 negative regulation of fibroblast apoptotic process GO:2000270 Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast apoptotic process. GOC:mtg_apoptosis GOC:obol GOC:yaf Any process that activates or increases the frequency, rate or extent of fibroblast apoptotic process. jl 2010-11-23T01:07:29Z positive regulation of fibroblast apoptosis biological_process GO:2000271 positive regulation of fibroblast apoptotic process GO:2000271 Any process that activates or increases the frequency, rate or extent of fibroblast apoptotic process. GOC:mtg_apoptosis GOC:obol GOC:yaf Any process that modulates the frequency, rate or extent of cellular amino acid biosynthetic process. vw 2010-12-10T11:54:19Z regulation of cellular amino acid anabolism regulation of cellular amino acid biosynthesis regulation of cellular amino acid biosynthetic process regulation of cellular amino acid formation regulation of cellular amino acid synthesis biological_process GO:2000282 regulation of amino acid biosynthetic process GO:2000282 Any process that modulates the frequency, rate or extent of cellular amino acid biosynthetic process. GOC:obol regulation of cellular amino acid anabolism GOC:obol regulation of cellular amino acid biosynthesis GOC:obol regulation of cellular amino acid biosynthetic process GOC:obol regulation of cellular amino acid formation GOC:obol regulation of cellular amino acid synthesis GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of an amino acid biosynthetic process. vw 2010-12-10T11:54:23Z negative regulation of amino acid anabolism negative regulation of amino acid biosynthesis negative regulation of amino acid formation negative regulation of amino acid synthesis negative regulation of cellular amino acid biosynthetic process biological_process GO:2000283 negative regulation of amino acid biosynthetic process GO:2000283 Any process that stops, prevents or reduces the frequency, rate or extent of an amino acid biosynthetic process. GOC:obol negative regulation of amino acid anabolism GOC:obol negative regulation of amino acid biosynthesis GOC:obol negative regulation of amino acid formation GOC:obol negative regulation of amino acid synthesis GOC:obol negative regulation of cellular amino acid biosynthetic process GOC:obol Any process that activates or increases the frequency, rate or extent of cellular amino acid biosynthetic process. vw 2010-12-10T11:54:27Z positive regulation of amino acid anabolism positive regulation of amino acid biosynthesis positive regulation of amino acid formation positive regulation of amino acid synthesis positive regulation of cellular amino acid biosynthetic process biological_process GO:2000284 positive regulation of amino acid biosynthetic process GO:2000284 Any process that activates or increases the frequency, rate or extent of cellular amino acid biosynthetic process. GOC:obol positive regulation of amino acid anabolism GOC:obol positive regulation of amino acid biosynthesis GOC:obol positive regulation of amino acid formation GOC:obol positive regulation of amino acid synthesis GOC:obol positive regulation of cellular amino acid biosynthetic process GOC:obol Any process that activates or increases the frequency, rate or extent of myotome development. rl 2010-12-16T05:17:15Z biological_process GO:2000287 positive regulation of myotome development GO:2000287 Any process that activates or increases the frequency, rate or extent of myotome development. GOC:BHF Any process that activates or increases the frequency, rate or extent of myoblast proliferation. rl 2010-12-16T05:20:52Z biological_process GO:2000288 positive regulation of myoblast proliferation GO:2000288 Any process that activates or increases the frequency, rate or extent of myoblast proliferation. GOC:BHF Any process that modulates the frequency, rate or extent of myotome development. mah 2010-12-20T10:22:05Z biological_process GO:2000290 regulation of myotome development GO:2000290 Any process that modulates the frequency, rate or extent of myotome development. GOC:mah Any process that modulates the frequency, rate or extent of myoblast proliferation. mah 2010-12-20T10:34:26Z biological_process GO:2000291 regulation of myoblast proliferation GO:2000291 Any process that modulates the frequency, rate or extent of myoblast proliferation. GOC:mah Any process that modulates the frequency, rate or extent of endothelial cell apoptotic process. mah 2011-02-03T10:43:16Z regulation of apoptosis of endothelial cells regulation of endothelial cell programmed cell death by apoptosis regulation of killing of endothelial cells regulation of programmed cell death of endothelial cells by apoptosis regulation of programmed cell death, endothelial cells regulation of endothelial cell apoptosis biological_process GO:2000351 regulation of endothelial cell apoptotic process GO:2000351 Any process that modulates the frequency, rate or extent of endothelial cell apoptotic process. GOC:mah GOC:mtg_apoptosis regulation of apoptosis of endothelial cells GOC:obol regulation of endothelial cell programmed cell death by apoptosis GOC:obol regulation of killing of endothelial cells GOC:obol regulation of programmed cell death of endothelial cells by apoptosis GOC:obol regulation of programmed cell death, endothelial cells GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell apoptotic process. mah 2011-02-03T10:43:20Z negative regulation of apoptosis of endothelial cells negative regulation of endothelial cell programmed cell death by apoptosis negative regulation of killing of endothelial cells negative regulation of programmed cell death of endothelial cells by apoptosis negative regulation of programmed cell death, endothelial cells negative regulation of endothelial cell apoptosis biological_process GO:2000352 negative regulation of endothelial cell apoptotic process GO:2000352 Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell apoptotic process. GOC:BHF GOC:mah GOC:mtg_apoptosis negative regulation of apoptosis of endothelial cells GOC:obol negative regulation of endothelial cell programmed cell death by apoptosis GOC:obol negative regulation of killing of endothelial cells GOC:obol negative regulation of programmed cell death of endothelial cells by apoptosis GOC:obol negative regulation of programmed cell death, endothelial cells GOC:obol Any process that activates or increases the frequency, rate or extent of endothelial cell apoptotic process. mah 2011-02-03T10:43:23Z positive regulation of apoptosis of endothelial cells positive regulation of endothelial cell programmed cell death by apoptosis positive regulation of killing of endothelial cells positive regulation of programmed cell death of endothelial cells by apoptosis positive regulation of programmed cell death, endothelial cells positive regulation of endothelial cell apoptosis biological_process GO:2000353 positive regulation of endothelial cell apoptotic process GO:2000353 Any process that activates or increases the frequency, rate or extent of endothelial cell apoptotic process. GOC:BHF GOC:mah GOC:mtg_apoptosis positive regulation of apoptosis of endothelial cells GOC:obol positive regulation of endothelial cell programmed cell death by apoptosis GOC:obol positive regulation of killing of endothelial cells GOC:obol positive regulation of programmed cell death of endothelial cells by apoptosis GOC:obol positive regulation of programmed cell death, endothelial cells GOC:obol Any process that modulates the frequency, rate or extent of oxygen metabolic process. mah 2011-02-11T02:03:32Z regulation of diatomic oxygen metabolic process regulation of oxygen metabolism biological_process GO:2000374 regulation of oxygen metabolic process GO:2000374 Any process that modulates the frequency, rate or extent of oxygen metabolic process. GOC:mah regulation of diatomic oxygen metabolic process GOC:obol regulation of oxygen metabolism GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of oxygen metabolic process. mah 2011-02-11T02:03:44Z negative regulation of diatomic oxygen metabolic process negative regulation of oxygen metabolism biological_process GO:2000375 negative regulation of oxygen metabolic process GO:2000375 Any process that stops, prevents or reduces the frequency, rate or extent of oxygen metabolic process. GOC:mah negative regulation of diatomic oxygen metabolic process GOC:obol negative regulation of oxygen metabolism GOC:obol Any process that activates or increases the frequency, rate or extent of oxygen metabolic process. mah 2011-02-11T02:03:52Z positive regulation of diatomic oxygen metabolic process positive regulation of oxygen metabolism biological_process GO:2000376 positive regulation of oxygen metabolic process GO:2000376 Any process that activates or increases the frequency, rate or extent of oxygen metabolic process. GOC:mah positive regulation of diatomic oxygen metabolic process GOC:obol positive regulation of oxygen metabolism GOC:obol Any process that modulates the frequency, rate or extent of mesoderm development. vk 2011-02-15T03:09:46Z biological_process GO:2000380 regulation of mesoderm development GO:2000380 Any process that modulates the frequency, rate or extent of mesoderm development. GOC:BHF Any process that stops, prevents or reduces the frequency, rate or extent of mesoderm development. vk 2011-02-15T03:10:02Z biological_process GO:2000381 negative regulation of mesoderm development GO:2000381 Any process that stops, prevents or reduces the frequency, rate or extent of mesoderm development. GOC:BHF Any process that activates or increases the frequency, rate or extent of mesoderm development. vk 2011-02-15T03:10:12Z biological_process GO:2000382 positive regulation of mesoderm development GO:2000382 Any process that activates or increases the frequency, rate or extent of mesoderm development. GOC:BHF Any process that modulates the frequency, rate or extent of ectoderm development. vk 2011-02-15T03:17:10Z biological_process GO:2000383 regulation of ectoderm development GO:2000383 Any process that modulates the frequency, rate or extent of ectoderm development. GOC:BHF Any process that stops, prevents or reduces the frequency, rate or extent of ectoderm development. vk 2011-02-15T03:17:27Z biological_process GO:2000384 negative regulation of ectoderm development GO:2000384 Any process that stops, prevents or reduces the frequency, rate or extent of ectoderm development. GOC:BHF Any process that activates or increases the frequency, rate or extent of ectoderm development. vk 2011-02-15T03:17:39Z biological_process GO:2000385 positive regulation of ectoderm development GO:2000385 Any process that activates or increases the frequency, rate or extent of ectoderm development. GOC:BHF Any process that modulates the frequency, rate or extent of lymphocyte migration. mah 2011-02-23T10:45:19Z biological_process GO:2000401 regulation of lymphocyte migration GO:2000401 Any process that modulates the frequency, rate or extent of lymphocyte migration. GOC:mah Any process that stops, prevents or reduces the frequency, rate or extent of lymphocyte migration. mah 2011-02-23T10:45:47Z biological_process GO:2000402 negative regulation of lymphocyte migration GO:2000402 Any process that stops, prevents or reduces the frequency, rate or extent of lymphocyte migration. GOC:mah Any process that activates or increases the frequency, rate or extent of lymphocyte migration. mah 2011-02-23T10:46:06Z biological_process GO:2000403 positive regulation of lymphocyte migration GO:2000403 Any process that activates or increases the frequency, rate or extent of lymphocyte migration. GOC:mah Any process that modulates the frequency, rate or extent of hematopoietic stem cell migration. bf 2011-03-09T09:34:08Z regulation of hemopoietic stem cell migration biological_process GO:2000471 regulation of hematopoietic stem cell migration GO:2000471 Any process that modulates the frequency, rate or extent of hematopoietic stem cell migration. GOC:obol regulation of hemopoietic stem cell migration GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic stem cell migration. bf 2011-03-09T09:34:54Z negative regulation of hemopoietic stem cell migration biological_process GO:2000472 negative regulation of hematopoietic stem cell migration GO:2000472 Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic stem cell migration. GOC:obol negative regulation of hemopoietic stem cell migration GOC:obol Any process that activates or increases the frequency, rate or extent of hematopoietic stem cell migration. bf 2011-03-09T09:35:25Z positive regulation of hemopoietic stem cell migration biological_process GO:2000473 positive regulation of hematopoietic stem cell migration GO:2000473 Any process that activates or increases the frequency, rate or extent of hematopoietic stem cell migration. GOC:obol positive regulation of hemopoietic stem cell migration GOC:obol Any process that modulates the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis. bf 2011-03-18T02:18:34Z biological_process GO:2000495 regulation of cell proliferation involved in compound eye morphogenesis GO:2000495 Any process that modulates the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis. GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis. bf 2011-03-18T02:19:22Z biological_process GO:2000496 negative regulation of cell proliferation involved in compound eye morphogenesis GO:2000496 Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis. GOC:obol Any process that activates or increases the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis. bf 2011-03-18T02:19:54Z biological_process GO:2000497 positive regulation of cell proliferation involved in compound eye morphogenesis GO:2000497 Any process that activates or increases the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis. GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of gastrulation. yaf 2011-04-01T04:10:08Z biological_process GO:2000542 negative regulation of gastrulation GO:2000542 Any process that stops, prevents or reduces the frequency, rate or extent of gastrulation. GOC:obol Any process that activates or increases the frequency, rate or extent of gastrulation. yaf 2011-04-01T04:10:15Z biological_process GO:2000543 positive regulation of gastrulation GO:2000543 Any process that activates or increases the frequency, rate or extent of gastrulation. GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of stem cell proliferation. dph 2011-04-27T01:04:22Z biological_process GO:2000647 negative regulation of stem cell proliferation GO:2000647 Any process that stops, prevents or reduces the frequency, rate or extent of stem cell proliferation. GOC:dph Any process that activates or increases the frequency, rate or extent of stem cell proliferation. dph 2011-04-27T01:04:25Z biological_process GO:2000648 positive regulation of stem cell proliferation GO:2000648 Any process that activates or increases the frequency, rate or extent of stem cell proliferation. GOC:dph Any process that modulates the frequency, rate or extent of motor neuron apoptotic process. pr 2011-05-09T10:56:17Z regulation of motoneuron apoptosis regulation of motor neuron apoptosis biological_process GO:2000671 regulation of motor neuron apoptotic process GO:2000671 Any process that modulates the frequency, rate or extent of motor neuron apoptotic process. GOC:mtg_apoptosis GOC:obol regulation of motoneuron apoptosis GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of motor neuron apoptotic process. pr 2011-05-09T10:56:21Z negative regulation of motoneuron apoptosis negative regulation of motor neuron apoptosis biological_process GO:2000672 negative regulation of motor neuron apoptotic process GO:2000672 Any process that stops, prevents or reduces the frequency, rate or extent of motor neuron apoptotic process. GOC:mtg_apoptosis GOC:obol negative regulation of motoneuron apoptosis GOC:obol Any process that activates or increases the frequency, rate or extent of motor neuron apoptotic process. pr 2011-05-09T10:56:24Z positive regulation of motoneuron apoptosis positive regulation of motor neuron apoptosis biological_process GO:2000673 positive regulation of motor neuron apoptotic process GO:2000673 Any process that activates or increases the frequency, rate or extent of motor neuron apoptotic process. GOC:mtg_apoptosis GOC:obol positive regulation of motoneuron apoptosis GOC:obol Any process that modulates the frequency, rate or extent of cardiac muscle cell myoblast differentiation. yaf 2011-05-25T09:08:01Z regulation of myocardial precursor cell differentiation biological_process regulation of cardiac myoblast differentiation GO:2000690 regulation of cardiac muscle cell myoblast differentiation GO:2000690 Any process that modulates the frequency, rate or extent of cardiac muscle cell myoblast differentiation. GOC:obol regulation of myocardial precursor cell differentiation GOC:obol regulation of cardiac myoblast differentiation GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle cell myoblast differentiation. yaf 2011-05-25T09:08:06Z negative regulation of myocardial precursor cell differentiation biological_process negative regulation of cardiac myoblast differentiation GO:2000691 negative regulation of cardiac muscle cell myoblast differentiation GO:2000691 Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle cell myoblast differentiation. GOC:obol negative regulation of myocardial precursor cell differentiation GOC:obol negative regulation of cardiac myoblast differentiation GOC:obol Any process that activates or increases the frequency, rate or extent of cardiac muscle cell myoblast differentiation. yaf 2011-05-25T09:08:09Z positive regulation of myocardial precursor cell differentiation biological_process positive regulation of cardiac myoblast differentiation GO:2000700 positive regulation of cardiac muscle cell myoblast differentiation GO:2000700 Any process that activates or increases the frequency, rate or extent of cardiac muscle cell myoblast differentiation. GOC:obol positive regulation of myocardial precursor cell differentiation GOC:obol positive regulation of cardiac myoblast differentiation GOC:obol Any process that modulates the frequency, rate or extent of cardiac muscle cell differentiation. vk 2011-06-08T10:51:06Z regulation of cardiomyocyte differentiation biological_process regulation of heart muscle cell differentiation GO:2000725 regulation of cardiac muscle cell differentiation GO:2000725 Any process that modulates the frequency, rate or extent of cardiac muscle cell differentiation. GOC:BHF regulation of cardiomyocyte differentiation GOC:obol regulation of heart muscle cell differentiation GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle cell differentiation. vk 2011-06-08T10:51:11Z negative regulation of cardiomyocyte differentiation biological_process negative regulation of heart muscle cell differentiation GO:2000726 negative regulation of cardiac muscle cell differentiation GO:2000726 Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle cell differentiation. GOC:BHF negative regulation of cardiomyocyte differentiation GOC:obol negative regulation of heart muscle cell differentiation GOC:obol Any process that activates or increases the frequency, rate or extent of cardiac muscle cell differentiation. vk 2011-06-08T10:51:15Z positive regulation of cardiomyocyte differentiation biological_process positive regulation of heart muscle cell differentiation GO:2000727 positive regulation of cardiac muscle cell differentiation GO:2000727 Any process that activates or increases the frequency, rate or extent of cardiac muscle cell differentiation. GOC:BHF positive regulation of cardiomyocyte differentiation GOC:obol positive regulation of heart muscle cell differentiation GOC:obol Any process that modulates the frequency, rate or extent of stem cell differentiation. yaf 2011-06-14T02:05:16Z biological_process GO:2000736 regulation of stem cell differentiation GO:2000736 Any process that modulates the frequency, rate or extent of stem cell differentiation. GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of stem cell differentiation. yaf 2011-06-14T02:05:20Z biological_process GO:2000737 negative regulation of stem cell differentiation GO:2000737 Any process that stops, prevents or reduces the frequency, rate or extent of stem cell differentiation. GOC:obol Any process that activates or increases the frequency, rate or extent of stem cell differentiation. yaf 2011-06-14T02:05:23Z biological_process GO:2000738 positive regulation of stem cell differentiation GO:2000738 Any process that activates or increases the frequency, rate or extent of stem cell differentiation. GOC:obol Any process that modulates the frequency, rate or extent of cytoplasmic translation. vw 2011-06-20T10:39:19Z biological_process GO:2000765 regulation of cytoplasmic translation GO:2000765 Any process that modulates the frequency, rate or extent of cytoplasmic translation. GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translation. vw 2011-06-20T10:39:23Z biological_process GO:2000766 negative regulation of cytoplasmic translation GO:2000766 Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translation. GOC:obol Any process that activates or increases the frequency, rate or extent of cytoplasmic translation. vw 2011-06-20T10:39:26Z biological_process GO:2000767 positive regulation of cytoplasmic translation GO:2000767 Any process that activates or increases the frequency, rate or extent of cytoplasmic translation. GOC:obol Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation involved in lung development. pr 2011-06-24T01:53:50Z biological_process GO:2000790 regulation of mesenchymal cell proliferation involved in lung development GO:2000790 Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation involved in lung development. PMID:21513708 Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal cell proliferation involved in lung development. pr 2011-06-24T01:53:53Z biological_process GO:2000791 negative regulation of mesenchymal cell proliferation involved in lung development GO:2000791 Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal cell proliferation involved in lung development. PMID:21513708 Any process that activates or increases the frequency, rate or extent of mesenchymal cell proliferation involved in lung development. pr 2011-06-24T01:53:56Z biological_process GO:2000792 positive regulation of mesenchymal cell proliferation involved in lung development GO:2000792 Any process that activates or increases the frequency, rate or extent of mesenchymal cell proliferation involved in lung development. PMID:21513708 Any process that modulates the frequency, rate or extent of epithelial cell proliferation involved in lung morphogenesis. pr 2011-06-25T07:22:38Z biological_process GO:2000794 regulation of epithelial cell proliferation involved in lung morphogenesis GO:2000794 Any process that modulates the frequency, rate or extent of epithelial cell proliferation involved in lung morphogenesis. PMID:21513708 Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell proliferation involved in lung morphogenesis. pr 2011-06-25T07:22:42Z biological_process GO:2000795 negative regulation of epithelial cell proliferation involved in lung morphogenesis GO:2000795 Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell proliferation involved in lung morphogenesis. PMID:21513708 Any process that stops, prevents or reduces the frequency, rate or extent of myoblast proliferation. pr 2011-07-12T03:06:04Z biological_process GO:2000818 negative regulation of myoblast proliferation GO:2000818 Any process that stops, prevents or reduces the frequency, rate or extent of myoblast proliferation. GOC:obol Any process that modulates the frequency, rate or extent of heart morphogenesis. vk 2011-07-19T10:08:58Z biological_process regulation of cardiac morphogenesis GO:2000826 regulation of heart morphogenesis GO:2000826 Any process that modulates the frequency, rate or extent of heart morphogenesis. GOC:BHF regulation of cardiac morphogenesis GOC:obol Any process that modulates the frequency, rate or extent of steroid hormone secretion. bf 2011-07-26T08:38:46Z biological_process GO:2000831 regulation of steroid hormone secretion GO:2000831 Any process that modulates the frequency, rate or extent of steroid hormone secretion. GOC:sl Any process that stops, prevents or reduces the frequency, rate or extent of steroid hormone secretion. bf 2011-07-26T08:38:50Z biological_process GO:2000832 negative regulation of steroid hormone secretion GO:2000832 Any process that stops, prevents or reduces the frequency, rate or extent of steroid hormone secretion. GOC:sl Any process that activates or increases the frequency, rate or extent of steroid hormone secretion. bf 2011-07-26T08:38:51Z biological_process GO:2000833 positive regulation of steroid hormone secretion GO:2000833 Any process that activates or increases the frequency, rate or extent of steroid hormone secretion. GOC:sl Any process that modulates the frequency, rate or extent of androgen secretion. bf 2011-07-26T08:39:45Z biological_process GO:2000834 regulation of androgen secretion GO:2000834 Any process that modulates the frequency, rate or extent of androgen secretion. GOC:sl Any process that stops, prevents or reduces the frequency, rate or extent of androgen secretion. bf 2011-07-26T08:39:48Z biological_process GO:2000835 negative regulation of androgen secretion GO:2000835 Any process that stops, prevents or reduces the frequency, rate or extent of androgen secretion. GOC:sl Any process that activates or increases the frequency, rate or extent of androgen secretion. bf 2011-07-26T08:39:51Z biological_process GO:2000836 positive regulation of androgen secretion GO:2000836 Any process that activates or increases the frequency, rate or extent of androgen secretion. GOC:sl Any process that modulates the frequency, rate or extent of forebrain neuron differentiation. yaf 2011-08-03T12:09:12Z biological_process GO:2000977 regulation of forebrain neuron differentiation GO:2000977 Any process that modulates the frequency, rate or extent of forebrain neuron differentiation. GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of forebrain neuron differentiation. yaf 2011-08-03T12:09:16Z biological_process GO:2000978 negative regulation of forebrain neuron differentiation GO:2000978 Any process that stops, prevents or reduces the frequency, rate or extent of forebrain neuron differentiation. GOC:obol Any process that activates or increases the frequency, rate or extent of forebrain neuron differentiation. yaf 2011-08-03T12:09:19Z biological_process GO:2000979 positive regulation of forebrain neuron differentiation GO:2000979 Any process that activates or increases the frequency, rate or extent of forebrain neuron differentiation. GOC:obol Any process that modulates the frequency, rate or extent of skeletal muscle cell differentiation. yaf 2011-08-11T08:54:37Z biological_process GO:2001014 regulation of skeletal muscle cell differentiation GO:2001014 Any process that modulates the frequency, rate or extent of skeletal muscle cell differentiation. GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle cell differentiation. yaf 2011-08-11T08:54:41Z biological_process GO:2001015 negative regulation of skeletal muscle cell differentiation GO:2001015 Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle cell differentiation. GOC:obol Any process that activates or increases the frequency, rate or extent of skeletal muscle cell differentiation. yaf 2011-08-11T08:54:44Z biological_process GO:2001016 positive regulation of skeletal muscle cell differentiation GO:2001016 Any process that activates or increases the frequency, rate or extent of skeletal muscle cell differentiation. GOC:obol Any process that modulates the frequency, rate or extent of retrograde axon cargo transport. kmv 2011-08-11T09:44:42Z regulation of retrograde axonal transport biological_process GO:2001017 regulation of retrograde axon cargo transport GO:2001017 Any process that modulates the frequency, rate or extent of retrograde axon cargo transport. GOC:obol regulation of retrograde axonal transport GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of retrograde axon cargo transport. kmv 2011-08-11T09:44:46Z negative regulation of retrograde axonal transport biological_process GO:2001018 negative regulation of retrograde axon cargo transport GO:2001018 Any process that stops, prevents or reduces the frequency, rate or extent of retrograde axon cargo transport. GOC:obol negative regulation of retrograde axonal transport GOC:obol Any process that activates or increases the frequency, rate or extent of retrograde axon cargo transport. kmv 2011-08-11T09:44:49Z positive regulation of retrograde axonal transport biological_process GO:2001019 positive regulation of retrograde axon cargo transport GO:2001019 Any process that activates or increases the frequency, rate or extent of retrograde axon cargo transport. GOC:obol positive regulation of retrograde axonal transport GOC:obol Any process that modulates the frequency, rate or extent of tongue muscle cell differentiation. yaf 2011-08-24T11:10:16Z biological_process GO:2001035 regulation of tongue muscle cell differentiation GO:2001035 Any process that modulates the frequency, rate or extent of tongue muscle cell differentiation. GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of tongue muscle cell differentiation. yaf 2011-08-24T11:10:20Z biological_process GO:2001036 negative regulation of tongue muscle cell differentiation GO:2001036 Any process that stops, prevents or reduces the frequency, rate or extent of tongue muscle cell differentiation. GOC:obol Any process that activates or increases the frequency, rate or extent of tongue muscle cell differentiation. yaf 2011-08-24T11:10:22Z biological_process GO:2001037 positive regulation of tongue muscle cell differentiation GO:2001037 Any process that activates or increases the frequency, rate or extent of tongue muscle cell differentiation. GOC:obol Any process that modulates the frequency, rate or extent of mesenchymal cell apoptotic process. yaf 2011-09-08T02:49:59Z regulation of mesenchymal cell apoptosis biological_process GO:2001053 regulation of mesenchymal cell apoptotic process GO:2001053 Any process that modulates the frequency, rate or extent of mesenchymal cell apoptotic process. GOC:mtg_apoptosis GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal cell apoptotic process. yaf 2011-09-08T02:50:05Z negative regulation of mesenchymal cell apoptosis biological_process GO:2001054 negative regulation of mesenchymal cell apoptotic process GO:2001054 Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal cell apoptotic process. GOC:mtg_apoptosis GOC:obol Any process that activates or increases the frequency, rate or extent of mesenchymal cell apoptotic process. yaf 2011-09-08T02:50:09Z positive regulation of mesenchymal cell apoptosis biological_process GO:2001055 positive regulation of mesenchymal cell apoptotic process GO:2001055 Any process that activates or increases the frequency, rate or extent of mesenchymal cell apoptotic process. GOC:mtg_apoptosis GOC:obol Any process that modulates the frequency, rate or extent of RNA biosynthetic process. dph 2011-10-17T11:36:25Z regulation of RNA anabolism regulation of RNA biosynthesis regulation of RNA formation regulation of RNA synthesis biological_process GO:2001141 regulation of RNA biosynthetic process GO:2001141 Any process that modulates the frequency, rate or extent of RNA biosynthetic process. GOC:dph regulation of RNA anabolism GOC:obol regulation of RNA biosynthesis GOC:obol regulation of RNA formation GOC:obol regulation of RNA synthesis GOC:obol Any process that modulates the frequency, rate or extent of vasculogenesis. yaf 2011-11-15T01:22:31Z regulation of vascular morphogenesis biological_process GO:2001212 regulation of vasculogenesis GO:2001212 Any process that modulates the frequency, rate or extent of vasculogenesis. GOC:obol regulation of vascular morphogenesis GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of vasculogenesis. yaf 2011-11-15T01:22:36Z negative regulation of vascular morphogenesis biological_process GO:2001213 negative regulation of vasculogenesis GO:2001213 Any process that stops, prevents or reduces the frequency, rate or extent of vasculogenesis. GOC:obol negative regulation of vascular morphogenesis GOC:obol Any process that activates or increases the frequency, rate or extent of vasculogenesis. yaf 2011-11-15T01:22:39Z positive regulation of vascular morphogenesis biological_process GO:2001214 positive regulation of vasculogenesis GO:2001214 Any process that activates or increases the frequency, rate or extent of vasculogenesis. GOC:obol positive regulation of vascular morphogenesis GOC:obol Any process that modulates the frequency, rate or extent of neuron migration. kmv 2011-11-17T10:01:38Z regulation of neuron chemotaxis regulation of neuronal migration biological_process regulation of neuron guidance GO:2001222 regulation of neuron migration GO:2001222 Any process that modulates the frequency, rate or extent of neuron migration. GOC:obol regulation of neuron chemotaxis GOC:obol regulation of neuronal migration GOC:obol regulation of neuron guidance GOC:obol Any process that stops, prevents or reduces the frequency, rate or extent of neuron migration. kmv 2011-11-17T10:01:45Z negative regulation of neuron chemotaxis negative regulation of neuronal migration biological_process negative regulation of neuron guidance GO:2001223 negative regulation of neuron migration GO:2001223 Any process that stops, prevents or reduces the frequency, rate or extent of neuron migration. GOC:obol negative regulation of neuron chemotaxis GOC:obol negative regulation of neuronal migration GOC:obol negative regulation of neuron guidance GOC:obol Any process that activates or increases the frequency, rate or extent of neuron migration. kmv 2011-11-17T10:01:49Z positive regulation of neuron chemotaxis positive regulation of neuronal migration biological_process positive regulation of neuron guidance GO:2001224 positive regulation of neuron migration GO:2001224 Any process that activates or increases the frequency, rate or extent of neuron migration. GOC:obol positive regulation of neuron chemotaxis GOC:obol positive regulation of neuronal migration GOC:obol positive regulation of neuron guidance GOC:obol Any process that modulates the frequency, rate or extent of apoptotic signaling pathway. pr 2011-11-24T01:20:49Z regulation of apoptotic signalling pathway biological_process GO:2001233 regulation of apoptotic signaling pathway GO:2001233 Any process that modulates the frequency, rate or extent of apoptotic signaling pathway. GOC:mtg_apoptosis regulation of apoptotic signalling pathway GOC:mah Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic signaling pathway. pr 2011-11-24T01:20:54Z negative regulation of apoptotic signalling pathway biological_process GO:2001234 negative regulation of apoptotic signaling pathway GO:2001234 Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic signaling pathway. GOC:mtg_apoptosis negative regulation of apoptotic signalling pathway GOC:mah Any process that activates or increases the frequency, rate or extent of apoptotic signaling pathway. pr 2011-11-24T01:20:58Z positive regulation of apoptotic signalling pathway biological_process GO:2001235 positive regulation of apoptotic signaling pathway GO:2001235 Any process that activates or increases the frequency, rate or extent of apoptotic signaling pathway. GOC:mtg_apoptosis positive regulation of apoptotic signalling pathway GOC:mah Any process that stops, prevents or reduces the frequency, rate or extent of chromosome organization. yaf 2011-12-02T02:01:20Z negative regulation of chromosome organisation biological_process negative regulation of chromosome organization and biogenesis negative regulation of maintenance of genome integrity negative regulation of nuclear genome maintenance GO:2001251 negative regulation of chromosome organization GO:2001251 Any process that stops, prevents or reduces the frequency, rate or extent of chromosome organization. GOC:obol negative regulation of chromosome organisation GOC:obol negative regulation of chromosome organization and biogenesis GOC:obol negative regulation of maintenance of genome integrity GOC:obol negative regulation of nuclear genome maintenance GOC:obol Any process that activates or increases the frequency, rate or extent of chromosome organization. yaf 2011-12-02T02:01:26Z positive regulation of chromosome organisation biological_process positive regulation of chromosome organization and biogenesis positive regulation of maintenance of genome integrity positive regulation of nuclear genome maintenance GO:2001252 positive regulation of chromosome organization GO:2001252 Any process that activates or increases the frequency, rate or extent of chromosome organization. GOC:obol positive regulation of chromosome organisation GOC:obol positive regulation of chromosome organization and biogenesis GOC:obol positive regulation of maintenance of genome integrity GOC:obol positive regulation of nuclear genome maintenance GOC:obol NBO:0000073 GC_ID:1 PMID:30365038 PMID:32761142 ncbi_taxonomy NCBITaxon:1 root NCBITaxon:1 GC_ID:1 PMID:15371245 ncbi_taxonomy NCBITaxon:10066 Muridae NCBITaxon:10066 GC_ID:1 ncbi_taxonomy NCBITaxon:10088 Mus <genus> NCBITaxon:10088 NCBITaxon:85055 GC_ID:1 ncbi_taxonomy NCBITaxon:10090 Mus musculus NCBITaxon:10090 GC_ID:1 ncbi_taxonomy NCBITaxon:117570 Teleostomi NCBITaxon:117570 NCBITaxon:40673 GC_ID:1 ncbi_taxonomy NCBITaxon:117571 Euteleostomi NCBITaxon:117571 GC_ID:1 ncbi_taxonomy NCBITaxon:1206794 Ecdysozoa NCBITaxon:1206794 GC_ID:1 ncbi_taxonomy NCBITaxon:131567 cellular organisms NCBITaxon:131567 GC_ID:1 ncbi_taxonomy NCBITaxon:1338369 Dipnotetrapodomorpha NCBITaxon:1338369 GC_ID:1 PMID:11743200 PMID:11791233 ncbi_taxonomy NCBITaxon:1437010 Boreoeutheria NCBITaxon:1437010 GC_ID:1 ncbi_taxonomy NCBITaxon:186623 Actinopteri NCBITaxon:186623 GC_ID:1 ncbi_taxonomy NCBITaxon:1963758 Myomorpha NCBITaxon:1963758 GC_ID:1 PMID:10874751 PMID:11557979 ncbi_taxonomy NCBITaxon:197562 Pancrustacea NCBITaxon:197562 GC_ID:1 PMID:11557979 PMID:9727836 ncbi_taxonomy NCBITaxon:197563 Mandibulata NCBITaxon:197563 GC_ID:1 PMID:23020233 PMID:30257078 ncbi_taxonomy NCBITaxon:2759 Eukaryota NCBITaxon:2759 GC_ID:1 PMID:11214319 PMID:12082125 PMID:12878460 PMID:15522813 ncbi_taxonomy NCBITaxon:314146 Euarchontoglires NCBITaxon:314146 GC_ID:1 PMID:11214319 PMID:12082125 PMID:15522813 ncbi_taxonomy NCBITaxon:314147 Glires NCBITaxon:314147 GC_ID:1 ncbi_taxonomy NCBITaxon:32443 Teleostei NCBITaxon:32443 GC_ID:1 ncbi_taxonomy NCBITaxon:32523 Tetrapoda NCBITaxon:32523 GC_ID:1 ncbi_taxonomy NCBITaxon:32524 Amniota NCBITaxon:32524 GC_ID:1 ncbi_taxonomy NCBITaxon:32525 Theria <mammals> NCBITaxon:32525 GC_ID:1 ncbi_taxonomy NCBITaxon:33154 Opisthokonta NCBITaxon:33154 GC_ID:1 ncbi_taxonomy NCBITaxon:33208 Metazoa NCBITaxon:33208 GC_ID:1 ncbi_taxonomy NCBITaxon:33213 Bilateria NCBITaxon:33213 GC_ID:1 ncbi_taxonomy NCBITaxon:33317 Protostomia NCBITaxon:33317 GC_ID:1 ncbi_taxonomy NCBITaxon:33511 Deuterostomia NCBITaxon:33511 GC_ID:1 PMID:15019624 PMID:15371245 ncbi_taxonomy NCBITaxon:337687 Muroidea NCBITaxon:337687 NCBITaxon:109679 GC_ID:1 ncbi_taxonomy NCBITaxon:39107 Murinae NCBITaxon:39107 GC_ID:1 ncbi_taxonomy NCBITaxon:40674 Mammalia NCBITaxon:40674 GC_ID:1 ncbi_taxonomy NCBITaxon:41665 Neopterygii NCBITaxon:41665 GC_ID:1 ncbi_taxonomy NCBITaxon:50557 Insecta NCBITaxon:50557 GC_ID:1 ncbi_taxonomy NCBITaxon:6072 Eumetazoa NCBITaxon:6072 GC_ID:1 ncbi_taxonomy NCBITaxon:6656 Arthropoda NCBITaxon:6656 GC_ID:1 ncbi_taxonomy NCBITaxon:6960 Hexapoda NCBITaxon:6960 GC_ID:1 ncbi_taxonomy NCBITaxon:7711 Chordata NCBITaxon:7711 GC_ID:1 ncbi_taxonomy NCBITaxon:7742 Vertebrata <vertebrates> NCBITaxon:7742 GC_ID:1 ncbi_taxonomy NCBITaxon:7776 Gnathostomata <vertebrates> NCBITaxon:7776 GC_ID:1 ncbi_taxonomy NCBITaxon:7898 Actinopterygii NCBITaxon:7898 GC_ID:1 ncbi_taxonomy NCBITaxon:8287 Sarcopterygii NCBITaxon:8287 GC_ID:1 ncbi_taxonomy NCBITaxon:862507 Mus <subgenus> NCBITaxon:862507 GC_ID:1 ncbi_taxonomy NCBITaxon:88770 Panarthropoda NCBITaxon:88770 GC_ID:1 ncbi_taxonomy NCBITaxon:89593 Craniata <chordates> NCBITaxon:89593 GC_ID:1 ncbi_taxonomy NCBITaxon:9347 Eutheria NCBITaxon:9347 GC_ID:1 ncbi_taxonomy NCBITaxon:9989 Rodentia NCBITaxon:9989 OBI:0100026 quality PATO:0000000 obsolete pato true PATO:0000000 A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities PATO:0000072 quality PATO:0000001 quality PATO:0000001 A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities PATOC:GVG quality PATO:0000002 obsolete value true PATO:0000002 quality PATO:0000003 obsolete assay true PATO:0000003 A quality of inhering in a bearer by virtue of the bearer's disposition to move freely. quality PATO:0000004 Should be defined using translocation. mobility PATO:0000004 A quality of inhering in a bearer by virtue of the bearer's disposition to move freely. PATOC:GVG quality PATO:0000005 obsolete absolute activity true PATO:0000005 quality PATO:0000006 obsolete process true PATO:0000006 quality PATO:0000007 obsolete relative activity true PATO:0000007 A physical quality inhering in a bearer by virtue of the bearer's scalar absolute value of the rate of change of the bearer's position. quality velocity PATO:0000008 speed PATO:0000008 A physical quality inhering in a bearer by virtue of the bearer's scalar absolute value of the rate of change of the bearer's position. Wikipedia:http://en.wikipedia.org/wiki/Velocity quality PATO:0000009 obsolete absolute speed true PATO:0000009 quality PATO:0000010 obsolete relative speed true PATO:0000010 A time quality inhering in a bearer by virtue of how long the bearer has existed. quality PATO:0000011 age PATO:0000011 A time quality inhering in a bearer by virtue of how long the bearer has existed. WordNet:WordNet quality PATO:0000012 obsolete absolute age true PATO:0000012 quality PATO:0000013 obsolete relative age true PATO:0000013 A composite chromatic quality composed of hue, saturation and intensity parts. PATO:0000020 colour relative color quality PATO:0000014 color PATO:0000014 A composite chromatic quality composed of hue, saturation and intensity parts. PATOC:GVG A chromatic scalar-circular quality inhering in an object that manifests in an observer by virtue of the dominant wavelength of the visible light; may be subject to fiat divisions, typically into 7 or 8 spectra. quality PATO:0000015 color hue PATO:0000015 A chromatic scalar-circular quality inhering in an object that manifests in an observer by virtue of the dominant wavelength of the visible light; may be subject to fiat divisions, typically into 7 or 8 spectra. PATOC:cjm A scalar optical property that is the intensity, value or amount of perceived light. color intensity color lightness color value quality PATO:0000016 Color brightness refers to the intensity, lightness or value of the light present. Think of this as a dimmer switch. color brightness PATO:0000016 A scalar optical property that is the intensity, value or amount of perceived light. PATOC:MAH A scalar chromatic property that is the degree of purity of perceived light. quality PATO:0000017 Color saturation refers to the amount of white light or gray paint mixed in with the hue (single wavelength) and is a measure of color purity. color saturation PATO:0000017 A scalar chromatic property that is the degree of purity of perceived light. PATOC:GVG A luminous flux quality inhering in a bearer by virtue of the bearer's emitting longer wavelength light following the absorption of shorter wavelength radiation; fluorescence is common with aromatic compounds with several rings joined together. quality PATO:0000018 fluorescence PATO:0000018 A luminous flux quality inhering in a bearer by virtue of the bearer's emitting longer wavelength light following the absorption of shorter wavelength radiation; fluorescence is common with aromatic compounds with several rings joined together. PATOC:GVG A chromatic property that is the relative position of different hues or degrees of saturation. quality PATO:0000019 color pattern PATO:0000019 A chromatic property that is the relative position of different hues or degrees of saturation. PATOC:GVG PATO:0000020 true A quality inhering in a bearer by virtue of the bearer's disposition to harmonious coexistence. quality PATO:0000021 Needs redefined or obsoleted. Is this the same as genetic incompatibility? Moved to organismal quality. compatibility PATO:0000021 A quality inhering in a bearer by virtue of the bearer's disposition to harmonious coexistence. PATOC:GVG quality PATO:0000022 obsolete gametophytic compatability true PATO:0000022 quality PATO:0000023 obsolete relative compatability true PATO:0000023 quality PATO:0000024 obsolete sporophytic compatability true PATO:0000024 A single physical entity inhering in an bearer by virtue of the bearer's quantities or relative ratios of subparts. PATO:0002015 composed of compositionality content structure, composition quality PATO:0000025 For example calcium composition (which may inhere in bone), haemoglobin composition (which may inhere in blood). composition PATO:0000025 A single physical entity inhering in an bearer by virtue of the bearer's quantities or relative ratios of subparts. PATOC:GVG quality PATO:0000026 obsolete carbohydrate composition true PATO:0000026 quality PATO:0000027 obsolete electrolyte composition true PATO:0000027 quality PATO:0000028 obsolete macromolecular composition true PATO:0000028 quality PATO:0000029 obsolete protein composition true PATO:0000029 quality PATO:0000030 obsolete enzyme composition true PATO:0000030 quality PATO:0000031 obsolete metabolite composition true PATO:0000031 quality PATO:0000032 obsolete secondary product composition true PATO:0000032 A quality inhering in a substance by virtue of the amount of the bearer's there is mixed with another substance. concentration quality PATO:0000033 concentration of PATO:0000033 A quality inhering in a substance by virtue of the amount of the bearer's there is mixed with another substance. Wikipedia:http://en.wikipedia.org/wiki/concentration quality PATO:0000034 obsolete protein concentration true PATO:0000034 quality PATO:0000035 obsolete carbohydrate concentration true PATO:0000035 quality PATO:0000036 obsolete water content true PATO:0000036 A physical quality inhering in a bearer by virtue of the bearer's density, firmness, or viscosity. quality firmness PATO:0000037 consistency PATO:0000037 A physical quality inhering in a bearer by virtue of the bearer's density, firmness, or viscosity. PATOC:GVG quality PATO:0000038 obsolete gel consistency true PATO:0000038 A physical quality inhering in a bearer by virtue of the bearer's orientation in space. quality PATO:0000039 TODO: consider merging with angular placement. direction PATO:0000039 A physical quality inhering in a bearer by virtue of the bearer's orientation in space. thesaurus.maths:thesaurus.maths A quality that is the extent of space between two entities. quality PATO:0000040 distance PATO:0000040 A quality that is the extent of space between two entities. PATOC:GVG quality PATO:0000041 obsolete absolutedistance true PATO:0000041 quality PATO:0000042 obsolete relative distance true PATO:0000042 A quality of a physical entity inhering in a bearer by virtue of whether the bearer's molecules are being perceived by a taste and odorant receptors. quality PATO:0000043 flavor PATO:0000043 A quality of a physical entity inhering in a bearer by virtue of whether the bearer's molecules are being perceived by a taste and odorant receptors. PATOC:GVG A physical quality which inheres in a bearer by virtue of the number of the bearer's repetitive actions in a particular time. quality PATO:0000044 frequency PATO:0000044 A physical quality which inheres in a bearer by virtue of the number of the bearer's repetitive actions in a particular time. Wikipedia:http://en.wikipedia.org/wiki/frequency quality PATO:0000045 obsolete absolute frequency true PATO:0000045 quality PATO:0000046 obsolete relative frequency true PATO:0000046 An organismal quality inhering in a bearer by virtue of the bearer's ability to undergo sexual reproduction in order to differentiate the individuals or types involved. quality PATO:0000047 biological sex PATO:0000047 An organismal quality inhering in a bearer by virtue of the bearer's ability to undergo sexual reproduction in order to differentiate the individuals or types involved. MGED:MGED A physical quality inhering in a bearer by virtue of the bearer's resistance to pressure, being broken, or pierced quality impenetrability toughness PATO:0000048 hardness PATO:0000048 A physical quality inhering in a bearer by virtue of the bearer's resistance to pressure, being broken, or pierced merriam-webster:merriam-webster A quality inhering in a bearer by virtue of the bearer's possessing or displaying a distinctive feature in type or degree or effect or force. quality PATO:0000049 intensity PATO:0000049 A quality inhering in a bearer by virtue of the bearer's possessing or displaying a distinctive feature in type or degree or effect or force. PATOC:GVG A time quality inhering in a bearer by virtue of the bearer's expected maximum age. quality PATO:0000050 life span PATO:0000050 A time quality inhering in a bearer by virtue of the bearer's expected maximum age. PATOC:GVG A quality of a single physical entity inhering in the bearer by virtue of the bearer's size or shape or structure. quality PATO:0000051 morphology PATO:0000051 A quality of a single physical entity inhering in the bearer by virtue of the bearer's size or shape or structure. PATOC:GVG A morphological quality inhering in a bearer by virtue of the bearer's ratios of distances between its features (points, edges, surfaces and also holes etc). PATO:0001647 relational shape quality quality PATO:0000052 Shapes are invariant on size transformations. Shapes can be subdivided into 2D and 3D shapes, We can also make a distinction between shapes of complete self-connected objects, and shapes of parts of objects. shape PATO:0000052 A morphological quality inhering in a bearer by virtue of the bearer's ratios of distances between its features (points, edges, surfaces and also holes etc). PATOC:GVG PATO:0000053 true quality PATO:0000054 obsolete absolute number true PATO:0000054 quality PATO:0000055 obsolete relative number true PATO:0000055 An organismal quality inhering in a bearer by virtue of the bearer's disposition to synthesize a particular organic compound required for its growth. quality nutritional quality PATO:0000056 trophic quality PATO:0000056 An organismal quality inhering in a bearer by virtue of the bearer's disposition to synthesize a particular organic compound required for its growth. Wikipedia:http://en.wikipedia.org/wiki/Trophic_level A quality of a single process inhering in a bearer by virtue of the bearer's occurrence. PATO:0000156 PATO:0000158 temporal incidence quality PATO:0000057 occurrence PATO:0000057 A quality of a single process inhering in a bearer by virtue of the bearer's occurrence. PATOC:GVG A physical quality inhering in a bearer by virtue of the bearer's molecules being are aerially dispersed and perceived by an odorant receptor. quality PATO:0000058 odor PATO:0000058 A physical quality inhering in a bearer by virtue of the bearer's molecules being are aerially dispersed and perceived by an odorant receptor. PATOC:GVG A parental quality inhering in a bearer by virtue of exhibiting the characteristic of a parent. parental type quality PATO:0000059 obsolete parental quality true PATO:0000059 A parental quality inhering in a bearer by virtue of exhibiting the characteristic of a parent. WordNet:WordNet A spatial quality inhering in a bearer by virtue of the bearer's exhibiting repetition of placement of its parts. PATO:0000132 PATO:0001565 distribution quality pattern PATO:0000060 spatial pattern PATO:0000060 A spatial quality inhering in a bearer by virtue of the bearer's exhibiting repetition of placement of its parts. PATOC:GVG quality PATO:0000061 obsolete relative pattern true PATO:0000061 A sleep quality defined by the mathematic properties of the relative time frames of the sleep cycle. quality PATO:0000062 sleep pattern PATO:0000062 A sleep quality defined by the mathematic properties of the relative time frames of the sleep cycle. PATOC:GVG quality PATO:0000063 obsolete percentage true PATO:0000063 quality PATO:0000064 obsolete absolute percentage true PATO:0000064 quality PATO:0000065 obsolete relative percentage true PATO:0000065 A texture quality inhering in a bearer by virtue of the bearer's having hair or bristles. quality PATO:0000066 pilosity PATO:0000066 A texture quality inhering in a bearer by virtue of the bearer's having hair or bristles. PATOC:GVG quality PATO:0000067 obsolete relative pilosity true PATO:0000067 A quality of an entity that is descriptive or observational, typically not represented numerically. quality PATO:0000068 TODO: define this or obsolete it and move children somewhere else. qualitative PATO:0000068 A quality of an entity that is descriptive or observational, typically not represented numerically. https://libguides.macalester.edu/c.php?g=527786&p=3608639 https://www.ncbi.nlm.nih.gov/books/NBK470395/ A quality inhering in a bearer by virtue of the whether the bearer differs from normal or average. quality PATO:0000069 deviation (from_normal) PATO:0000069 A quality inhering in a bearer by virtue of the whether the bearer differs from normal or average. PATOC:GVG The number of entities of this type that are part of the whole organism. PATO:0000053 PATO:0000071 PATO:0001169 PATO:0001226 presence or absence in organism quantitative quality count in organism number presence PATO:0000070 This term was originally named "presence". It has been renamed to reduce ambiguity. Consider annotating with the reciprocal relation,PATO:0001555, has_number_of. For example, rather than E=fin ray Q=count in organism C=10, say E=organism Q=has number of E2= fin ray C=10. amount PATO:0000070 The number of entities of this type that are part of the whole organism. PATOC:GVG PATO:0000071 true PATO:0000072 true quality PATO:0000073 obsolete relative_quality true PATO:0000073 quality PATO:0000074 obsolete shattering true PATO:0000074 quality PATO:0000075 obsolete threshability true PATO:0000075 quality PATO:0000076 obsolete regulation true PATO:0000076 A quality inhering in a bearer by virtue of the whether the bearer's disposition to react to a stimulus or an agent. quality reactivity response responsivity PATO:0000077 response to PATO:0000077 A quality inhering in a bearer by virtue of the whether the bearer's disposition to react to a stimulus or an agent. PATOC:GVG reactivity GOC:CJM A quality of a single process inhering in a bearer by virtue of the bearer's movement or variation characterized by the regular recurrence or alternation of different quantities or conditions. quality PATO:0000078 rhythm quality PATO:0000078 A quality of a single process inhering in a bearer by virtue of the bearer's movement or variation characterized by the regular recurrence or alternation of different quantities or conditions. answers.com:answers.com quality PATO:0000079 obsolete absolute rhythym true PATO:0000079 A physical quality of a process inhering in a bearer by virtue of the size of the bearer's maximum displacement from the 'normal' position, when periodic motion is taking place. quality PATO:0000080 amplitude PATO:0000080 A physical quality of a process inhering in a bearer by virtue of the size of the bearer's maximum displacement from the 'normal' position, when periodic motion is taking place. thesaurus.maths:thesaurus.maths PATO:0000081 true A rhythm quality inhering in a bearer by virtue of the repetitiveness of bearer's rhythm. quality PATO:0000082 persistence PATO:0000082 A rhythm quality inhering in a bearer by virtue of the repetitiveness of bearer's rhythm. reference.com:reference.com A quality that exists by virtue of being a particular point in the time of a cycle. quality PATO:0000083 phase PATO:0000083 A quality that exists by virtue of being a particular point in the time of a cycle. PATOC:GVG quality PATO:0000084 obsolete relative rhythym true PATO:0000084 A quality inhering in a bearer by virtue of the bearer's disposition to detect or perceive external stimulation. sensitivity quality PATO:0000085 sensitivity toward PATO:0000085 A quality inhering in a bearer by virtue of the bearer's disposition to detect or perceive external stimulation. PATOC:GVG quality PATO:0000086 obsolete absolute sensitivity true PATO:0000086 quality PATO:0000087 obsolete disease sensitivity true PATO:0000087 quality PATO:0000088 obsolete absolute disease sensitivity true PATO:0000088 quality PATO:0000089 obsolete relative disease sensitivity true PATO:0000089 quality PATO:0000090 obsolete relative sensitivity true PATO:0000090 quality PATO:0000091 obsolete stress sensitivity true PATO:0000091 quality PATO:0000092 obsolete abiotic stress sensitivity true PATO:0000092 quality PATO:0000093 obsolete chemical sensitivity true PATO:0000093 quality PATO:0000094 obsolete drug sensitivity true PATO:0000094 quality PATO:0000095 obsolete absolute drug sensitivity true PATO:0000095 quality PATO:0000096 obsolete relative drug sensitivity true PATO:0000096 quality PATO:0000097 obsolete herbicide sensitivity true PATO:0000097 quality PATO:0000098 obsolete insecticide sensitivity true PATO:0000098 quality PATO:0000099 obsolete plant growth hormone sensitivity true PATO:0000099 quality PATO:0000100 obsolete soil composition sensitivity true PATO:0000100 quality PATO:0000101 obsolete soil nutrient sensitivity true PATO:0000101 quality PATO:0000102 obsolete macronutrient sensitivity true PATO:0000102 quality PATO:0000103 obsolete micronutrient sensitivity true PATO:0000103 quality PATO:0000104 obsolete osmotic response sensitivity true PATO:0000104 quality PATO:0000105 obsolete p h sensitivity true PATO:0000105 quality PATO:0000106 obsolete acid sensitivity true PATO:0000106 quality PATO:0000107 obsolete alkali sensitivity true PATO:0000107 quality PATO:0000108 obsolete salt sensitivity true PATO:0000108 quality PATO:0000109 obsolete water sensitivity true PATO:0000109 quality PATO:0000110 obsolete drought sensitivity true PATO:0000110 quality PATO:0000111 obsolete flooding sensitivity true PATO:0000111 quality PATO:0000112 obsolete humidity sensitivity true PATO:0000112 quality PATO:0000113 obsolete radiation sensitivity true PATO:0000113 quality PATO:0000114 obsolete temperature sensitivity true PATO:0000114 quality PATO:0000115 obsolete absolute temperature sensitivity true PATO:0000115 quality PATO:0000116 obsolete relative temperature sensitivity true PATO:0000116 A morphology quality inhering in a bearer by virtue of the bearer's physical magnitude. quality PATO:0000117 size PATO:0000117 A morphology quality inhering in a bearer by virtue of the bearer's physical magnitude. WordNet:WordNet quality PATO:0000118 obsolete absolute size true PATO:0000118 A 1-D extent quality inhering in a bearer by virtue of the bearer's vertical dimension of extension. quality PATO:0000119 height PATO:0000119 A 1-D extent quality inhering in a bearer by virtue of the bearer's vertical dimension of extension. PATOC:GVG quality PATO:0000120 obsolete absolute height true PATO:0000120 quality PATO:0000121 obsolete relative height true PATO:0000121 A 1-D extent quality which is equal to the distance between two points. https://github.com/pato-ontology/pato/issues/337 quality PATO:0000122 Length often refers to the longer or longest dimension of an object, however, this is not always true. See https://github.com/pato-ontology/pato/issues/337 for full discussion. length PATO:0000122 A 1-D extent quality which is equal to the distance between two points. PATOC:GVG quality PATO:0000123 obsolete absolute length true PATO:0000123 quality PATO:0000124 obsolete relative length true PATO:0000124 A physical quality that inheres in a bearer by virtue of the proportion of the bearer's amount of matter. quality PATO:0000125 For any biological use of PATO, the concept that should be used is 'mass' and not 'weight'. For example, increased weight of an organism. mass PATO:0000125 A physical quality that inheres in a bearer by virtue of the proportion of the bearer's amount of matter. PATOC:GVG quality PATO:0000126 obsolete absolute mass true PATO:0000126 quality PATO:0000127 obsolete relative mass true PATO:0000127 A physical quality inhering in a bearer that has mass near a gravitational body. Important usage note: Note that this ontology has a class for a similar concept, mass (PATO:0000125). Mass and weight are not equivalent. For most use cases, the class mass is strongly preferred over weight. quality PATO:0000128 For any biological use of PATO, the concept that should be used is 'mass' and not 'weight'. For example, increased weight of an organism. weight PATO:0000128 A physical quality inhering in a bearer that has mass near a gravitational body. Important usage note: Note that this ontology has a class for a similar concept, mass (PATO:0000125). Mass and weight are not equivalent. For most use cases, the class mass is strongly preferred over weight. Wikipedia:http://en.wikipedia.org/wiki/Weight https://en.wikipedia.org/wiki/Mass#Weight_vs._mass quality PATO:0000129 obsolete absolute weight true PATO:0000129 quality PATO:0000130 obsolete relative weight true PATO:0000130 quality PATO:0000131 obsolete relative size true PATO:0000131 PATO:0000132 true A spatial quality inhering in a bearer by virtue of the bearer's placement which is defined by the angle between the bearer and an axis, or the angle between the bearer and another object. PATO:0000137 angular placement quality amount of rotation angle angular magnitude plane angle PATO:0000133 orientation PATO:0000133 A spatial quality inhering in a bearer by virtue of the bearer's placement which is defined by the angle between the bearer and an axis, or the angle between the bearer and another object. PATOC:JE quality PATO:0000134 obsolete absolute_angle true PATO:0000134 quality PATO:0000135 obsolete relative_angle true PATO:0000135 A morphological quality pertaining to the degree to which an object contains an opening, aperture, orifice or vent. quality PATO:0000136 closure PATO:0000136 A morphological quality pertaining to the degree to which an object contains an opening, aperture, orifice or vent. PATOC:CJM PATOC:GVG PATO:0000137 true quality PATO:0000138 obsolete absolute orientation true PATO:0000138 quality PATO:0000139 obsolete relative orientation true PATO:0000139 A spatial quality inhering in a bearer by virtue of the bearer's spatial location relative to other objects in the vicinity. PATO:0001032 PATO:0001631 location placement relational spatial quality quality PATO:0000140 position PATO:0000140 A spatial quality inhering in a bearer by virtue of the bearer's spatial location relative to other objects in the vicinity. PATOC:GVG A morphology quality inhering in a bearer by virtue of the bearer's relative position, shape, arrangements and connectivity of an organism's various parts; the pattern underlying its form. PATO:0001452 conformation relational structural quality quality PATO:0000141 structure PATO:0000141 A morphology quality inhering in a bearer by virtue of the bearer's relative position, shape, arrangements and connectivity of an organism's various parts; the pattern underlying its form. PATOC:GVG conformation VT:1000738 quality PATO:0000142 obsolete substance true PATO:0000142 quality PATO:0000143 obsolete addictive substance true PATO:0000143 quality PATO:0000144 This term was made obsolete because it is not a quality. To update annotations, consider the following term 'quality of a solid; 'PATO:0001546' obsolete solid substance true PATO:0000144 quality PATO:0000145 This term was made obsolete because it is not a quality. To update annotations, consider the following term 'quality of a liquid; PATO:0001548 ' obsolete liquid substance true PATO:0000145 A physical quality of the thermal energy of a system. quality PATO:0000146 temperature PATO:0000146 A physical quality of the thermal energy of a system. PATOC:GVG quality PATO:0000147 obsolete absolute temperature true PATO:0000147 quality PATO:0000148 obsolete body temperature true PATO:0000148 quality PATO:0000149 obsolete relative temperature true PATO:0000149 A morphologic quality inhering in a bearer by virtue of the bearer's relative size, organization and distribution of its surface elements or the representation or invention of the appearance of its surface; visual and tactile surface characteristics. quality PATO:0000150 texture PATO:0000150 A morphologic quality inhering in a bearer by virtue of the bearer's relative size, organization and distribution of its surface elements or the representation or invention of the appearance of its surface; visual and tactile surface characteristics. PATOC:GVG quality PATO:0000151 obsolete relative texture true PATO:0000151 A quality inhering in a bearer by virtue of the bearer's sensitivity towards a fixed location or value where a change is observed; upper limit. quality PATO:0000152 threshold PATO:0000152 A quality inhering in a bearer by virtue of the bearer's sensitivity towards a fixed location or value where a change is observed; upper limit. PATOC:GVG quality PATO:0000153 obsolete absolute threshold true PATO:0000153 quality PATO:0000154 obsolete pain threshold true PATO:0000154 quality PATO:0000155 obsolete relative threshold true PATO:0000155 PATO:0000156 true quality PATO:0000157 obsolete absolute temporal true PATO:0000157 PATO:0000158 true quality PATO:0000159 obsolete absolute incidence true PATO:0000159 quality PATO:0000160 obsolete relative incidence true PATO:0000160 A quality of a single process inhering in a bearer by virtue of the bearer's occurrence per unit time. quality PATO:0000161 rate PATO:0000161 A quality of a single process inhering in a bearer by virtue of the bearer's occurrence per unit time. PATOC:melissa quality PATO:0000162 obsolete absolute rate true PATO:0000162 quality PATO:0000163 obsolete relative rate true PATO:0000163 quality PATO:0000164 obsolete relative temporal true PATO:0000164 A quality in which events occur in sequence. quality PATO:0000165 time PATO:0000165 A quality in which events occur in sequence. PATOC:GVG quality PATO:0000166 obsolete absolute time true PATO:0000166 A limited, often assigned period of activity. quality PATO:0000167 obsolete bouts true PATO:0000167 A limited, often assigned period of activity. answers.com:answers.com quality PATO:0000168 obsolete relative time true PATO:0000168 An organismal quality inhering in a bearer or a population by virtue of the bearer's disposition to survive and develop normally or the number of surviving individuals in a given population. quality PATO:0000169 viability PATO:0000169 An organismal quality inhering in a bearer or a population by virtue of the bearer's disposition to survive and develop normally or the number of surviving individuals in a given population. PATOC:GVG quality PATO:0000170 obsolete yield true PATO:0000170 quality PATO:0000171 obsolete absolute yield true PATO:0000171 quality PATO:0000172 obsolete relative yield true PATO:0000172 quality PATO:0000173 obsolete function true PATO:0000173 quality PATO:0000174 obsolete autonomic function true PATO:0000174 quality PATO:0000175 obsolete behavioral function true PATO:0000175 quality PATO:0000176 obsolete metabolic function true PATO:0000176 quality PATO:0000177 obsolete physiological function true PATO:0000177 quality PATO:0000178 obsolete relative function true PATO:0000178 quality PATO:0000179 obsolete body position true PATO:0000179 quality PATO:0000180 obsolete body tone true PATO:0000180 quality PATO:0000181 obsolete piloerection true PATO:0000181 quality PATO:0000182 obsolete abdominal tone true PATO:0000182 quality PATO:0000183 obsolete limb tone true PATO:0000183 quality PATO:0000184 obsolete arousal true PATO:0000184 A behavioral quality inhering in a bearer by virtue of having physical steadiness. quality PATO:0000185 balance PATO:0000185 A behavioral quality inhering in a bearer by virtue of having physical steadiness. thefreedictionary:thefreedictionary An organismal quality inhering in a bearer by virtue of the bearer's behavior aggregate of the responses or reactions or movements in a given situation. PATO:0001722 behavioural quality quality PATO:0000186 behavioral quality PATO:0000186 An organismal quality inhering in a bearer by virtue of the bearer's behavior aggregate of the responses or reactions or movements in a given situation. PATOC:GVG A relational quality of occurrent inhering in a bearer by virtue of the bearer's ability to consume a resource. quality propensity to consume PATO:0000187 Use GO:0007631 obsolete consumption quality true PATO:0000187 A relational quality of occurrent inhering in a bearer by virtue of the bearer's ability to consume a resource. PATOC:GVG A behavioral quality inhering in a bearer by virtue of the bearer's having or lacking skillful and effective interaction of movement. quality PATO:0000188 coordination PATO:0000188 A behavioral quality inhering in a bearer by virtue of the bearer's having or lacking skillful and effective interaction of movement. PATOC:GVG A behavioral quality inhering in a bearer by virtue of whether the bearer's disposition to perceive differences between two or more stimuli. quality PATO:0000189 discrimination PATO:0000189 A behavioral quality inhering in a bearer by virtue of whether the bearer's disposition to perceive differences between two or more stimuli. PATOC:GVG quality PATO:0000190 obsolete gait true PATO:0000190 quality PATO:0000191 obsolete learning_and memory true PATO:0000191 quality PATO:0000192 obsolete locomotor_activity true PATO:0000192 quality PATO:0000193 obsolete mating true PATO:0000193 quality PATO:0000194 obsolete spontaneous_activity true PATO:0000194 quality PATO:0000195 obsolete startle response true PATO:0000195 quality PATO:0000196 obsolete vocalization true PATO:0000196 quality PATO:0000197 obsolete transfer_arousal true PATO:0000197 quality PATO:0000198 obsolete absolute consumption true PATO:0000198 quality PATO:0000199 obsolete relative consumption true PATO:0000199 quality PATO:0000200 obsolete learning true PATO:0000200 quality PATO:0000201 obsolete memory true PATO:0000201 quality PATO:0000202 obsolete long term memory true PATO:0000202 quality PATO:0000203 obsolete short term memory true PATO:0000203 quality PATO:0000204 obsolete absolute locomotor_activity true PATO:0000204 quality PATO:0000205 obsolete relative locomotor_activity true PATO:0000205 quality PATO:0000206 obsolete enzyme function true PATO:0000206 quality PATO:0000207 obsolete circulatory function true PATO:0000207 quality PATO:0000208 obsolete defensive function true PATO:0000208 quality PATO:0000209 obsolete digestive function true PATO:0000209 quality PATO:0000210 obsolete excretory function true PATO:0000210 quality PATO:0000211 obsolete muscle function true PATO:0000211 quality PATO:0000212 obsolete neural function true PATO:0000212 quality PATO:0000213 obsolete neurobehavioral function true PATO:0000213 quality PATO:0000214 obsolete reproductive function true PATO:0000214 quality PATO:0000215 obsolete respiratory function true PATO:0000215 quality PATO:0000216 obsolete heart rate true PATO:0000216 quality PATO:0000217 obsolete immune function true PATO:0000217 quality PATO:0000218 obsolete repair function true PATO:0000218 quality PATO:0000219 obsolete healing true PATO:0000219 quality PATO:0000220 obsolete regeneration true PATO:0000220 quality PATO:0000221 obsolete urination true PATO:0000221 quality PATO:0000222 obsolete muscle elevation true PATO:0000222 quality PATO:0000223 obsolete muscle strength true PATO:0000223 quality PATO:0000224 obsolete motor function true PATO:0000224 quality PATO:0000225 obsolete sensory function true PATO:0000225 quality PATO:0000226 obsolete tactile response true PATO:0000226 quality PATO:0000227 obsolete motor performance true PATO:0000227 quality PATO:0000228 obsolete auditory true PATO:0000228 quality PATO:0000229 obsolete olfactory true PATO:0000229 quality PATO:0000230 obsolete proprioreception true PATO:0000230 quality PATO:0000231 obsolete reflex true PATO:0000231 quality PATO:0000232 obsolete taste true PATO:0000232 quality PATO:0000233 obsolete touch true PATO:0000233 quality PATO:0000234 obsolete visual true PATO:0000234 quality PATO:0000235 obsolete odor_acuity true PATO:0000235 quality PATO:0000236 obsolete odor type true PATO:0000236 quality PATO:0000237 obsolete absolute odor_acuity true PATO:0000237 quality PATO:0000238 obsolete relative odor_acuity true PATO:0000238 quality PATO:0000239 obsolete blinking reflex true PATO:0000239 quality PATO:0000240 obsolete contact righting reflex true PATO:0000240 quality PATO:0000241 obsolete corneal reflex true PATO:0000241 quality PATO:0000242 obsolete flinch reflex true PATO:0000242 quality PATO:0000243 obsolete lordosis reflex true PATO:0000243 quality PATO:0000244 obsolete ocular reflex true PATO:0000244 quality PATO:0000245 obsolete pinna reflex true PATO:0000245 quality PATO:0000246 obsolete postural reflex true PATO:0000246 quality PATO:0000247 obsolete proboscis extension reflex true PATO:0000247 quality PATO:0000248 obsolete pupillary reflex true PATO:0000248 quality PATO:0000249 obsolete righting reflex true PATO:0000249 quality PATO:0000250 obsolete spinal reflex true PATO:0000250 quality PATO:0000251 obsolete startle reflex true PATO:0000251 quality PATO:0000252 obsolete suckling reflex true PATO:0000252 quality PATO:0000253 obsolete swallowing reflex true PATO:0000253 quality PATO:0000254 obsolete vibrissae reflex true PATO:0000254 quality PATO:0000255 obsolete taste_acuity true PATO:0000255 quality PATO:0000256 obsolete taste type true PATO:0000256 quality PATO:0000257 obsolete absolute taste_acuity true PATO:0000257 quality PATO:0000258 obsolete relative taste_acuity true PATO:0000258 quality PATO:0000259 obsolete visual_ability true PATO:0000259 quality PATO:0000260 obsolete visual_acuity true PATO:0000260 A quality of a single physical entity which is held by a bearer when the latter exhibits a state of growth, differentiation, or development. quality PATO:0000261 maturity PATO:0000261 A quality of a single physical entity which is held by a bearer when the latter exhibits a state of growth, differentiation, or development. Merriam-Webster:Merriam-Webster quality PATO:0000262 obsolete visual placing true PATO:0000262 quality PATO:0000263 obsolete visual threshold true PATO:0000263 quality PATO:0000264 obsolete absolute visual_ability true PATO:0000264 quality PATO:0000265 obsolete relative visual_ability true PATO:0000265 quality PATO:0000266 obsolete absolute visual_acuity true PATO:0000266 quality PATO:0000267 obsolete relative visual_acuity true PATO:0000267 quality PATO:0000268 obsolete absolute visual threshold true PATO:0000268 quality PATO:0000269 obsolete relative visual threshold true PATO:0000269 quality PATO:0000270 obsolete defecation true PATO:0000270 quality PATO:0000271 obsolete prepulse inhibition true PATO:0000271 quality PATO:0000272 obsolete relative neurobehavioral function true PATO:0000272 A reproductive quality inhering in an organism or population by virtue of the bearer's potential reproductive capacity ad measured by the number of gametes. quality PATO:0000273 fecundity PATO:0000273 A reproductive quality inhering in an organism or population by virtue of the bearer's potential reproductive capacity ad measured by the number of gametes. Wikipedia:http://en.wikipedia.org/wiki/Fecundity A reproductive quality inhering in a bearer by virtue of the bearer's initiating, sustaining, or supporting reproduction. quality PATO:0000274 fertility PATO:0000274 A reproductive quality inhering in a bearer by virtue of the bearer's initiating, sustaining, or supporting reproduction. PATOC:GVG quality PATO:0000275 obsolete gestational period true PATO:0000275 A reproductive quality inhering in the young of an animal by virtue of their number. quality litter size PATO:0000276 brood size PATO:0000276 A reproductive quality inhering in the young of an animal by virtue of their number. PATOC:GVG A fertility quality inhering in a female by virtue of the bearer's disposition to initiate, sustain, or support reproduction. quality PATO:0000277 female fertility PATO:0000277 A fertility quality inhering in a female by virtue of the bearer's disposition to initiate, sustain, or support reproduction. PATOC:GVG quality PATO:0000278 obsolete hybrid fertility true PATO:0000278 A fertility quality of inhering in a male by virtue of the bearer's disposition to initiate, sustain, or support reproduction. quality PATO:0000279 male fertility PATO:0000279 A fertility quality of inhering in a male by virtue of the bearer's disposition to initiate, sustain, or support reproduction. PATOC:GVG quality PATO:0000280 obsolete backcross fertility true PATO:0000280 quality PATO:0000281 obsolete cytoplasmic sterility true PATO:0000281 quality PATO:0000282 obsolete f1 fertility true PATO:0000282 quality PATO:0000283 obsolete f2 fertility true PATO:0000283 quality PATO:0000284 obsolete germ line dependent fertility true PATO:0000284 quality PATO:0000285 obsolete soma dependent fertility true PATO:0000285 quality PATO:0000286 obsolete cytoplasmic male sterility true PATO:0000286 quality PATO:0000287 obsolete absolute litter size true PATO:0000287 quality PATO:0000288 obsolete relative litter size true PATO:0000288 quality PATO:0000289 obsolete respiratory rate true PATO:0000289 quality PATO:0000290 obsolete absolute respiratory rate true PATO:0000290 quality PATO:0000291 obsolete relative respiratory rate true PATO:0000291 quality PATO:0000292 obsolete mobility value true PATO:0000292 quality PATO:0000293 obsolete absolute activity value true PATO:0000293 quality PATO:0000294 obsolete process value true PATO:0000294 quality PATO:0000295 obsolete relative activity value true PATO:0000295 quality PATO:0000296 obsolete speed value true PATO:0000296 A quality of a process which ends earlier than the natural end time or reference process. PATO:0001508 abolished quality incomplete PATO:0000297 TODO: the definition is incorrect. See absent. arrested PATO:0000297 A quality of a process which ends earlier than the natural end time or reference process. PATOC:LC quality PATO:0000298 obsolete not arrested value true PATO:0000298 A mobility quality of inhering in a bearer by virtue of the bearer's disposition to move freely. quality PATO:0000299 mobile PATO:0000299 A mobility quality of inhering in a bearer by virtue of the bearer's disposition to move freely. PATOC:GVG A mobility quality inhering in a bearer by virtue of the bearer's being incapable to move freely. quality fixed PATO:0000300 immobile PATO:0000300 A mobility quality inhering in a bearer by virtue of the bearer's being incapable to move freely. PATOC:GVG quality PATO:0000301 obsolete absolute speed value true PATO:0000301 quality PATO:0000302 obsolete relative speed value true PATO:0000302 A speed which is relatively high. high speed quality fast speed PATO:0000303 increased speed PATO:0000303 A speed which is relatively high. PATOC:GVG A speed which is relatively low. slow slow speed quality PATO:0000304 decreased speed PATO:0000304 A speed which is relatively low. PATOC:GVG quality PATO:0000305 obsolete age value true PATO:0000305 quality PATO:0000306 obsolete absolute age value true PATO:0000306 quality PATO:0000307 obsolete relative age value true PATO:0000307 An age which is relatively high. quality PATO:0000308 old PATO:0000308 An age which is relatively high. PATOC:GVG An age which is relatively low. quality PATO:0000309 young PATO:0000309 An age which is relatively low. PATOC:GVG quality PATO:0000310 obsolete color value true PATO:0000310 quality PATO:0000311 obsolete color hue value true PATO:0000311 quality PATO:0000312 obsolete color intensity value true PATO:0000312 quality PATO:0000313 obsolete color saturation value true PATO:0000313 quality PATO:0000314 obsolete flourescence value true PATO:0000314 quality PATO:0000315 obsolete color pattern value true PATO:0000315 quality PATO:0000316 obsolete relative color value true PATO:0000316 A color that lacks any hues as parts. quality PATO:0000317 black PATO:0000317 A color that lacks any hues as parts. PATOC:GVG A color hue with low wavelength of that portion of the visible spectrum lying between green and indigo, evoked in the human observer by radiant energy with wavelengths of approximately 420 to 490 nanometers. quality PATO:0000318 blue PATO:0000318 A color hue with low wavelength of that portion of the visible spectrum lying between green and indigo, evoked in the human observer by radiant energy with wavelengths of approximately 420 to 490 nanometers. Dictionary:http://dictionary.reference.com/ A color consisting of green and blue hue. quality PATO:0000319 cyan PATO:0000319 A color consisting of green and blue hue. PATOC:GVG A color hue with medium-low wavelength of that portion of the visible spectrum lying between yellow and blue, evoked in the human observer by radiant energy with wavelengths of approximately 490 to 570 nanometers. quality PATO:0000320 green PATO:0000320 A color hue with medium-low wavelength of that portion of the visible spectrum lying between yellow and blue, evoked in the human observer by radiant energy with wavelengths of approximately 490 to 570 nanometers. Dictionary:http://dictionary.reference.com/ A color consisting of red and blue hues. quality PATO:0000321 magenta PATO:0000321 A color consisting of red and blue hues. Wikipedia:http://en.wikipedia.org/wiki/Magenta A color hue with high wavelength of the long-wave end of the visible spectrum, evoked in the human observer by radiant energy with wavelengths of approximately 630 to 750 nanometers. quality PATO:0000322 red PATO:0000322 A color hue with high wavelength of the long-wave end of the visible spectrum, evoked in the human observer by radiant energy with wavelengths of approximately 630 to 750 nanometers. Dictionary:http://dictionary.reference.com/ An achromatic color of maximum brightness; the color of objects that reflect nearly all light of all visible wavelengths. quality whitish PATO:0000323 white PATO:0000323 An achromatic color of maximum brightness; the color of objects that reflect nearly all light of all visible wavelengths. Dictionary:http://dictionary.reference.com/ A color hue with medium wavelength of that portion of the visible spectrum lying between orange and green, evoked in the human observer by radiant energy with wavelengths of approximately 570 to 590 nanometers. quality PATO:0000324 yellow PATO:0000324 A color hue with medium wavelength of that portion of the visible spectrum lying between orange and green, evoked in the human observer by radiant energy with wavelengths of approximately 570 to 590 nanometers. Dictionary:http://dictionary.reference.com/ quality PATO:0000325 obsolete bright true PATO:0000325 quality PATO:0000326 obsolete dim true PATO:0000326 A color brightness which is relatively low. dark quality PATO:0000327 low brightness PATO:0000327 A color brightness which is relatively low. PATOC:MAH A color saturation which is of low purity. pale quality dull PATO:0000328 low saturation PATO:0000328 A color saturation which is of low purity. PATOC:MAH A color pattern inhering in a bearer by virtue of bearer's being marked with irregularly shaped spots or blots of a different hue or degree of saturation. blotched quality PATO:0000329 blotchy PATO:0000329 A color pattern inhering in a bearer by virtue of bearer's being marked with irregularly shaped spots or blots of a different hue or degree of saturation. Dictionary.com:Dictionary.com A spatial pattern inhering in a bearer by virtue of the bearer's magnitude of or the relationships between its repeated parts lack consistency. quality PATO:0000330 irregular spatial pattern PATO:0000330 A spatial pattern inhering in a bearer by virtue of the bearer's magnitude of or the relationships between its repeated parts lack consistency. PATOC:GVG A color quality inhering in a bearer by virtue of the bearer's being altered or spoiled in color. quality PATO:0000331 discolored PATO:0000331 A color quality inhering in a bearer by virtue of the bearer's being altered or spoiled in color. Dictionary.com:Dictionary.com PATO:0000332 true A color pattern inhering in a bearer by virtue of bearer's being marked with a round area of different hue or degree of saturation. quality PATO:0000333 spotted PATO:0000333 A color pattern inhering in a bearer by virtue of bearer's being marked with a round area of different hue or degree of saturation. PATOC:GVG PATO:0000334 true quality mottled (sensu Drosophila) PATO:0000335 obsolete variegated true PATO:0000335 A color quality inhering in a bearer by virtue of the bearer's having color. PATO:0000332 quality pigmented PATO:0000336 colored PATO:0000336 A color quality inhering in a bearer by virtue of the bearer's having color. PATOC:GVG A color quality inhering in a bearer by virtue of the bearer's lacking color. PATO:0000334 quality unpigmented PATO:0000337 colorless PATO:0000337 A color quality inhering in a bearer by virtue of the bearer's lacking color. PATOC:GVG quality PATO:0000338 obsolete compatability value true PATO:0000338 quality PATO:0000339 obsolete gametophytic compatability value true PATO:0000339 quality PATO:0000340 obsolete relative compatability value true PATO:0000340 quality PATO:0000341 obsolete sporophytic compatability value true PATO:0000341 quality PATO:0000342 obsolete gametophyte compatible value true PATO:0000342 quality PATO:0000343 obsolete gametophyte incompatible value true PATO:0000343 A compatibility quality inhering in a bearer by virtue of the bearer's being capable of harmonious coexistence. quality PATO:0000344 compatible PATO:0000344 A compatibility quality inhering in a bearer by virtue of the bearer's being capable of harmonious coexistence. PATOC:GVG A compatibility quality inhering in a bearer by virtue of the bearer's being incapable of harmonious coexistence. quality PATO:0000345 incompatible PATO:0000345 A compatibility quality inhering in a bearer by virtue of the bearer's being incapable of harmonious coexistence. PATOC:GVG quality PATO:0000346 obsolete sporophyte compatible value true PATO:0000346 quality PATO:0000347 obsolete sporophyte incompatible value true PATO:0000347 quality PATO:0000348 obsolete composition value true PATO:0000348 quality PATO:0000349 obsolete carbohydrate composition value true PATO:0000349 quality PATO:0000350 obsolete electrolyte composition value true PATO:0000350 quality PATO:0000351 obsolete macromolecular composition value true PATO:0000351 quality PATO:0000352 obsolete metabolite composition value true PATO:0000352 quality PATO:0000353 obsolete secondary product composition value true PATO:0000353 quality PATO:0000354 obsolete protein composition value true PATO:0000354 quality PATO:0000355 obsolete enzyme composition value true PATO:0000355 quality PATO:0000356 obsolete concentration value true PATO:0000356 quality PATO:0000357 obsolete protein concentration value true PATO:0000357 quality PATO:0000358 obsolete sugar concentration value true PATO:0000358 quality PATO:0000359 obsolete water content value true PATO:0000359 quality PATO:0000360 obsolete consistency value true PATO:0000360 quality PATO:0000361 obsolete gel consistency value true PATO:0000361 quality PATO:0000362 obsolete direction value true PATO:0000362 quality PATO:0000363 obsolete away true PATO:0000363 quality PATO:0000364 obsolete bi-directional true PATO:0000364 A directional quality inhering in a bearer by virtue of the bearer's direction from a higher to a lower point. quality PATO:0000365 down PATO:0000365 A directional quality inhering in a bearer by virtue of the bearer's direction from a higher to a lower point. PATOC:GVG A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the north when it faces east. quality PATO:0000366 left PATO:0000366 A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the north when it faces east. PATOC:GVG A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the north when it faces west. quality PATO:0000367 right PATO:0000367 A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the north when it faces west. PATOC:GVG quality PATO:0000368 obsolete towards1 true PATO:0000368 quality PATO:0000369 obsolete unidirectional true PATO:0000369 A directional quality inhering in a bearer by virtue of the bearer's direction from a lower to a higher point. quality PATO:0000370 up PATO:0000370 A directional quality inhering in a bearer by virtue of the bearer's direction from a lower to a higher point. PATOC:GVG quality PATO:0000371 obsolete distance value true PATO:0000371 quality PATO:0000372 obsolete absolute distance value true PATO:0000372 quality PATO:0000373 obsolete relative distance value true PATO:0000373 A distance which is greater relative to the normal or average. quality long distance PATO:0000374 increased distance PATO:0000374 A distance which is greater relative to the normal or average. PATOC:GVG A distance which is lesser relative to the normal or average. quality short distance PATO:0000375 decreased distance PATO:0000375 A distance which is lesser relative to the normal or average. PATOC:GVG quality PATO:0000376 obsolete flavor value true PATO:0000376 quality PATO:0000377 obsolete frequency value true PATO:0000377 quality PATO:0000378 obsolete absolute frequency value true PATO:0000378 quality PATO:0000379 obsolete relative frequency value true PATO:0000379 A frequency which is relatively high. high frequency quality frequent PATO:0000380 increased frequency PATO:0000380 A frequency which is relatively high. PATOC:GVG A frequency which is relatively low. low frequency quality infrequent PATO:0000381 decreased frequency PATO:0000381 A frequency which is relatively low. PATOC:GVG quality PATO:0000382 obsolete gender value true PATO:0000382 A biological sex quality inhering in an individual or a population that only produces gametes that can be fertilised by male gametes. quality PATO:0000383 female PATO:0000383 A biological sex quality inhering in an individual or a population that only produces gametes that can be fertilised by male gametes. MGED:MGED A biological sex quality inhering in an individual or a population whose sex organs contain only male gametes. quality PATO:0000384 male PATO:0000384 A biological sex quality inhering in an individual or a population whose sex organs contain only male gametes. MGED:MGED quality PATO:0000385 obsolete hardness value true PATO:0000385 A hardness quality of being rigid and resistant to pressure. quality firm impenetrable tough PATO:0000386 hard PATO:0000386 A hardness quality of being rigid and resistant to pressure. PATOC:GVG A hardness quality of giving little resistance to pressure. quality PATO:0000387 soft PATO:0000387 A hardness quality of giving little resistance to pressure. PATOC:GVG quality PATO:0000388 obsolete intensity value true PATO:0000388 A quality of a process inhering in a bearer by virtue of the bearer's having a sudden onset, sharp rise, and short course. quality PATO:0000389 acute PATO:0000389 A quality of a process inhering in a bearer by virtue of the bearer's having a sudden onset, sharp rise, and short course. dictionary:reference quality PATO:0000390 obsolete extreme true PATO:0000390 quality PATO:0000391 obsolete intense true PATO:0000391 quality PATO:0000392 obsolete limited true PATO:0000392 quality PATO:0000393 obsolete maximal true PATO:0000393 An intensity which is less than moderate in type or degree or effect or force. quality PATO:0000394 mild intensity PATO:0000394 An intensity which is less than moderate in type or degree or effect or force. PATOC:GVG An intensity which is less than extreme in type or degree or effect or force. quality PATO:0000395 moderate intensity PATO:0000395 An intensity which is less than extreme in type or degree or effect or force. Merriam-Webster:Merriam-Webster An intensity which is extremely bad or unpleasant in type or degree or effect or force. quality PATO:0000396 severe intensity PATO:0000396 An intensity which is extremely bad or unpleasant in type or degree or effect or force. WordNet:WordNet quality PATO:0000397 obsolete slight true PATO:0000397 quality PATO:0000398 obsolete vigorous true PATO:0000398 quality PATO:0000399 obsolete life span value true PATO:0000399 quality PATO:0000400 obsolete morphology value true PATO:0000400 quality PATO:0000401 obsolete shape value true PATO:0000401 A branchiness quality inhering in a bearer by virtue of the bearer's having branches. ramified ramiform quality PATO:0000402 branched PATO:0000402 A branchiness quality inhering in a bearer by virtue of the bearer's having branches. WordNet:WordNet A concave quality inhering in a bearer by virtue of the bearer's resembling a groove or fissure. quality PATO:0000403 cleft PATO:0000403 A concave quality inhering in a bearer by virtue of the bearer's resembling a groove or fissure. WordNet:WordNet A shape quality inhering in a bearer by virtue of the bearer's being curled or wound (especially in concentric rings or spirals). PATO:0001363 spiral quality helical helicoid helicoidal helix-shaped PATO:0000404 coiled PATO:0000404 A shape quality inhering in a bearer by virtue of the bearer's being curled or wound (especially in concentric rings or spirals). WordNet:WordNet A shape quality inhering in a bearer by virtue of the bearer's having parallel chains in undulate fashion on the border. quality PATO:0000405 curled PATO:0000405 A shape quality inhering in a bearer by virtue of the bearer's having parallel chains in undulate fashion on the border. PATOC:GVG A curvature quality inhering in a bearer by virtue of the bearer's having or being marked by a curve or smoothly rounded bend. bowing quality curled PATO:0000406 curved PATO:0000406 A curvature quality inhering in a bearer by virtue of the bearer's having or being marked by a curve or smoothly rounded bend. WordNet:WordNet A quality inhering in a bearer by virtue of the bearer's having a horizontal surface without a slope, tilt, or curvature. quality plate-like PATO:0000407 flat PATO:0000407 A quality inhering in a bearer by virtue of the bearer's having a horizontal surface without a slope, tilt, or curvature. web:http://www.merriam-webster.com/ PATO:0000408 true A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting an equatorial diameter greater than its polar diameter. oblate spheroid quality PATO:0000409 oblate PATO:0000409 A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting an equatorial diameter greater than its polar diameter. WordNet:WordNet A shape quality inhering in a bearer by virtue of the bearer's having leaflets or leaflets-like structures on each side of a common axis. quality feather-like of a leaf shape PATO:0000410 pinnate PATO:0000410 A shape quality inhering in a bearer by virtue of the bearer's having leaflets or leaflets-like structures on each side of a common axis. WordNet:WordNet A shape quality inhering in a bearer by virtue of the bearer's being such that every part of the surface or the circumference is equidistant from the center. quality round rounded PATO:0000411 circular PATO:0000411 A shape quality inhering in a bearer by virtue of the bearer's being such that every part of the surface or the circumference is equidistant from the center. thefreedictionary.com:thefreedictionary.com PATO:0000412 true A shape quality inhering in a bearer by virtue of the bearer's having an equal-sided rectangular form. quality PATO:0000413 square PATO:0000413 A shape quality inhering in a bearer by virtue of the bearer's having an equal-sided rectangular form. answers.com:answers.com A branchiness quality inhering in a bearer by virtue of the bearer's lacking branches. quality PATO:0000414 unbranched PATO:0000414 A branchiness quality inhering in a bearer by virtue of the bearer's lacking branches. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's being not curled or wound (especially in concentric rings or spirals). quality PATO:0000415 uncoiled PATO:0000415 A shape quality inhering in a bearer by virtue of the bearer's being not curled or wound (especially in concentric rings or spirals). WordNet:WordNet quality PATO:0000416 obsolete count value true PATO:0000416 quality PATO:0000417 obsolete absolute number value true PATO:0000417 quality PATO:0000418 obsolete relative number value true PATO:0000418 PATO:0000419 true PATO:0000420 true quality PATO:0000421 obsolete nutritional value true PATO:0000421 A nutritional quality inhering in a bearer by virtue of the bearer's inability to synthesize a particular organic compound required for its growth. quality PATO:0000422 auxotrophic PATO:0000422 A nutritional quality inhering in a bearer by virtue of the bearer's inability to synthesize a particular organic compound required for its growth. Wikipedia:http://en.wikipedia.org/wiki/Auxotrophic A nutritional quality inhering in a bearer by virtue of the bearer's ability to synthesize a particular organic compound required for its growth. quality PATO:0000423 prototrophic PATO:0000423 A nutritional quality inhering in a bearer by virtue of the bearer's ability to synthesize a particular organic compound required for its growth. Wikipedia:http://en.wikipedia.org/wiki/Prototrophic quality PATO:0000424 obsolete occurence value true PATO:0000424 quality PATO:0000425 obsolete continual true PATO:0000425 PATO:0000426 true A quality of a single process inhering in a bearer by virtue of the bearer's occurring or appearing again or repeatedly. quality PATO:0000427 recurrent PATO:0000427 A quality of a single process inhering in a bearer by virtue of the bearer's occurring or appearing again or repeatedly. thefreedictionary.com:thefreedictionary.com A quality of a single process inhering in a bearer by virtue of the bearer's once or in or a few unpredictable instances. quality PATO:0000428 sporadic PATO:0000428 A quality of a single process inhering in a bearer by virtue of the bearer's once or in or a few unpredictable instances. PATO:MAH WordNet:WordNet PATO:0000429 true quality PATO:0000430 obsolete unique true PATO:0000430 quality PATO:0000431 obsolete odor value true PATO:0000431 quality PATO:0000432 obsolete parental type value true PATO:0000432 A parental quality inhering in a bearer by virtue of exhibiting the characteristic of a father. quality PATO:0000433 obsolete paternal true PATO:0000433 A parental quality inhering in a bearer by virtue of exhibiting the characteristic of a father. WordNet:WordNet A parental quality inhering in a bearer by virtue of exhibiting the characteristic of a mother. quality PATO:0000434 obsolete maternal true PATO:0000434 A parental quality inhering in a bearer by virtue of exhibiting the characteristic of a mother. WordNet:WordNet quality PATO:0000435 obsolete pattern value true PATO:0000435 quality PATO:0000436 obsolete concrete true PATO:0000436 quality PATO:0000437 obsolete sleep pattern value true PATO:0000437 A variability quality inhering in a bearer by virtue of the bearer's lacking or not exhibiting variation. uniform quality constant PATO:0000438 invariant PATO:0000438 A variability quality inhering in a bearer by virtue of the bearer's lacking or not exhibiting variation. Dictionary:http://dictionary.reference.com/ quality PATO:0000439 obsolete perseverative true PATO:0000439 A pattern quality inhering in a bearer by virtue of the bearer's having a repeatable or predictable placement. quality PATO:0000440 regular spatial pattern PATO:0000440 A pattern quality inhering in a bearer by virtue of the bearer's having a repeatable or predictable placement. PATOC:GVG A quality of a single process inhering in a bearer by virtue of the bearer's marked by tedious repetition. quality PATO:0000441 repetitive PATO:0000441 A quality of a single process inhering in a bearer by virtue of the bearer's marked by tedious repetition. thefreedictionary.com:thefreedictionary.com A sleep pattern quality inhering in a bearer by virtue of the bearer's inability to sleep. quality PATO:0000442 Consider NBO:0000422. obsolete insomnia true PATO:0000442 A sleep pattern quality inhering in a bearer by virtue of the bearer's inability to sleep. WordNet:WordNet A sleep pattern quality inhering in a bearer by virtue of the bearer's disrupted sleep during normal sleeping period; often accompanied by cataplexy, sleep paralysis. quality PATO:0000443 Consider NBO:0000423 obsolete narcolepsy true PATO:0000443 quality PATO:0000444 obsolete percentage value true PATO:0000444 quality PATO:0000445 obsolete relative percentage value true PATO:0000445 quality PATO:0000446 obsolete absolute percentage value true PATO:0000446 quality PATO:0000447 obsolete decreased percentage true PATO:0000447 quality PATO:0000448 obsolete high percentage true PATO:0000448 quality PATO:0000449 obsolete increased percentage true PATO:0000449 quality PATO:0000450 obsolete low percentage true PATO:0000450 quality PATO:0000451 obsolete pilosity value true PATO:0000451 quality PATO:0000452 obsolete relative pilosity value true PATO:0000452 A pilosity quality inhering in a bearer by virtue of the bearer's lack of hairs or bristles. quality hairless PATO:0000453 glabrous PATO:0000453 A pilosity quality inhering in a bearer by virtue of the bearer's lack of hairs or bristles. PATOC:CJM PATOC:GVG A pilosity quality inhering in a bearer by virtue of the bearer's being covered with hair or hairlike projections. quality PATO:0000454 hairy PATO:0000454 A pilosity quality inhering in a bearer by virtue of the bearer's being covered with hair or hairlike projections. PATOC:GVG A maturity quality inhering in a bearer by virtue of the bearer's having arrived at the onset of puberty (the age at which sex glands become functional) but not yet fully mature. quality PATO:0000455 pubescent PATO:0000455 A maturity quality inhering in a bearer by virtue of the bearer's having arrived at the onset of puberty (the age at which sex glands become functional) but not yet fully mature. WordNet:WordNet quality PATO:0000456 obsolete abstract true PATO:0000456 quality PATO:0000457 obsolete deviation(from_normal) value true PATO:0000457 quality PATO:0000458 obsolete presence value true PATO:0000458 quality PATO:0000459 obsolete relative quantity value true PATO:0000459 A quality inhering in a bearer by virtue of the bearer's deviation from normal or average. quality aberrant atypia atypical defective PATO:0000460 abnormal PATO:0000460 A quality inhering in a bearer by virtue of the bearer's deviation from normal or average. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's exhibiting no deviation from normal or average. quality average PATO:0000461 normal PATO:0000461 A quality inhering in a bearer by virtue of the bearer's exhibiting no deviation from normal or average. PATOC:GVG A quality denoting the lack of an entity. PATO:0001996 absence absent from organism quality PATO:0000462 We recommend using the new absent terms (physical absence, absent anatomical entity, or absent process) instead of this class. This is a legacy term and will ultimately be obsoleted. See https://github.com/pato-ontology/pato/issues/331. absent PATO:0000462 A quality denoting the lack of an entity. thefreedictionary.:thefreedictionary. A quality inhering in a bearer by virtue of being clearly visible. quality distinct PATO:0000463 conspicuous PATO:0000463 A quality inhering in a bearer by virtue of being clearly visible. thefreedictionary:thefreedictionary A quality inhering in a bearer by virtue of not being clearly visible. quality faint PATO:0000464 inconspicuous PATO:0000464 A quality inhering in a bearer by virtue of not being clearly visible. thefreedictionary:thefreedictionary quality PATO:0000465 obsolete marked true PATO:0000465 quality PATO:0000466 obsolete none true PATO:0000466 A quality inhering in a bearer by virtue of the bearer's existence. quality present in organism PATO:0000467 present PATO:0000467 A quality inhering in a bearer by virtue of the bearer's existence. PATOC:GVG PATO:0000468 true quality PATO:0000469 obsolete high true PATO:0000469 An amount which is relatively high. PATO:0000420 PATO:0000650 increased number present in greater numbers in organism supernumerary quality accessory increased PATO:0000470 increased amount PATO:0000470 An amount which is relatively high. PATOC:GVG quality PATO:0000471 obsolete low true PATO:0000471 quality PATO:0000472 obsolete quality value true PATO:0000472 quality PATO:0000473 obsolete relative_quality value true PATO:0000473 quality PATO:0000474 obsolete shattering value true PATO:0000474 quality PATO:0000475 obsolete threshability value true PATO:0000475 quality PATO:0000476 obsolete bad value true PATO:0000476 quality PATO:0000477 obsolete good value true PATO:0000477 quality PATO:0000478 obsolete poor value true PATO:0000478 quality PATO:0000479 obsolete regulation value true PATO:0000479 quality PATO:0000480 obsolete positive regulation true PATO:0000480 quality PATO:0000481 obsolete negative regulation true PATO:0000481 quality PATO:0000482 obsolete response value true PATO:0000482 quality PATO:0000483 obsolete tactile hyperresponsive true PATO:0000483 quality PATO:0000484 obsolete tactile hyporesponsive true PATO:0000484 quality PATO:0000485 obsolete mild response true PATO:0000485 quality PATO:0000486 obsolete moderate response true PATO:0000486 A response quality inhering in a bearer by virtue of the bearer's disposition to react to a stimulus or an agent. responsive quality PATO:0000487 responsive to PATO:0000487 A response quality inhering in a bearer by virtue of the bearer's disposition to react to a stimulus or an agent. PATOC:GVG A response quality inhering in a bearer by virtue of the bearer's lack of reaction to a stimulus or an agent. unresponsive quality PATO:0000488 unresponsive to PATO:0000488 A response quality inhering in a bearer by virtue of the bearer's lack of reaction to a stimulus or an agent. PATOC:GVG quality PATO:0000489 obsolete vigorous response true PATO:0000489 quality PATO:0000490 obsolete rhythym value true PATO:0000490 quality PATO:0000491 obsolete sensitivity value true PATO:0000491 quality PATO:0000492 obsolete absolute rhythym value true PATO:0000492 quality PATO:0000493 obsolete amplitude value true PATO:0000493 quality PATO:0000494 obsolete period value true PATO:0000494 quality PATO:0000495 obsolete persistence value true PATO:0000495 quality PATO:0000496 obsolete phase value true PATO:0000496 quality PATO:0000497 obsolete relative rhythym value true PATO:0000497 A duration quality of a process which is relatively high. PATO:0000715 high time increased period increased time quality chronic prolonged period slow time PATO:0000498 increased duration PATO:0000498 A duration quality of a process which is relatively high. PATOC:GVG A duration quality of a process which is relatively low. PATO:0000716 decreased period decreased time low period shortened period quality fast time PATO:0000499 decreased duration PATO:0000499 A duration quality of a process which is relatively low. PATOC:GVG A phase which occurs earlier than the natural start time. quality PATO:0000500 advanced phase PATO:0000500 A phase which occurs earlier than the natural start time. PATOC:GVG A phase which occurs during dark cycle. quality PATO:0000501 dark phase PATO:0000501 A phase which occurs during dark cycle. PATOC:GVG A quality of a process which starts later than the natural start time or the reference process. quality late PATO:0000502 delayed PATO:0000502 A quality of a process which starts later than the natural start time or the reference process. PATOC:LC A phase which occurs during the light cycle. quality PATO:0000503 light phase PATO:0000503 A phase which occurs during the light cycle. PATOC:GVG A rhythm quality inhering in a bearer by virtue of the bearer's lacking rhythm. quality PATO:0000504 arrhythmic PATO:0000504 A rhythm quality inhering in a bearer by virtue of the bearer's lacking rhythm. PATOC:GVG A rhythm quality inhering in a bearer by virtue of the bearer's having rhythm. quality PATO:0000505 rhythmic PATO:0000505 A rhythm quality inhering in a bearer by virtue of the bearer's having rhythm. PATOC:GVG quality PATO:0000506 obsolete absolute sensitivity value true PATO:0000506 quality PATO:0000507 obsolete disease sensitivity value true PATO:0000507 quality PATO:0000508 obsolete relative sensitivity value true PATO:0000508 quality PATO:0000509 obsolete stress sensitivity value true PATO:0000509 quality PATO:0000510 obsolete temperature sensitivity value true PATO:0000510 quality PATO:0000511 obsolete absolute disease sensitivity value true PATO:0000511 quality PATO:0000512 obsolete relative disease sensitivity value true PATO:0000512 A quality inhering in a bearer by virtue of the bearer's lacking sensitivity toward an external stimulus. insensitive quality resistant PATO:0000513 insensitive toward PATO:0000513 A quality inhering in a bearer by virtue of the bearer's lacking sensitivity toward an external stimulus. PATOC:GVG quality PATO:0000514 obsolete intolerant value true PATO:0000514 A resistance quality inhering in a bearer by virtue of its disposition to endure or being insensitive to a stimulus. tolerant quality PATO:0000515 tolerant to PATO:0000515 A resistance quality inhering in a bearer by virtue of its disposition to endure or being insensitive to a stimulus. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's having sensitivity toward an external stimulus. sensitive quality PATO:0000516 sensitive toward PATO:0000516 A quality inhering in a bearer by virtue of the bearer's having sensitivity toward an external stimulus. PATOC:GVG quality PATO:0000517 obsolete abiotic stress sensitivity value true PATO:0000517 quality PATO:0000518 obsolete chemical sensitivity value true PATO:0000518 quality PATO:0000519 obsolete humidity sensitivity value true PATO:0000519 quality PATO:0000520 obsolete radiation sensitivity value true PATO:0000520 quality PATO:0000521 obsolete drug sensitivity value true PATO:0000521 quality PATO:0000522 obsolete herbicide sensitivity value true PATO:0000522 quality PATO:0000523 obsolete insecticide sensitivity value true PATO:0000523 quality PATO:0000524 obsolete plant growth hormone sensitivity value true PATO:0000524 quality PATO:0000525 obsolete soil composition sensitivity value true PATO:0000525 quality PATO:0000526 obsolete absolute drug sensitivity value true PATO:0000526 quality PATO:0000527 obsolete relative drug sensitivity value true PATO:0000527 quality PATO:0000528 obsolete drug insensitive true PATO:0000528 quality PATO:0000529 obsolete drug sensitive true PATO:0000529 quality PATO:0000530 obsolete soil nutrient sensitivity value true PATO:0000530 quality PATO:0000531 obsolete macronutrient sensitivity value true PATO:0000531 quality PATO:0000532 obsolete micronutrient sensitivity value true PATO:0000532 quality PATO:0000533 obsolete osmotic response sensitivity true PATO:0000533 quality PATO:0000534 obsolete p h sensitivity value true PATO:0000534 quality PATO:0000535 obsolete salt sensitivity value true PATO:0000535 quality PATO:0000536 obsolete water sensitivity value true PATO:0000536 quality PATO:0000537 obsolete acid sensitivity value true PATO:0000537 quality PATO:0000538 obsolete alkali sensitivity value true PATO:0000538 quality PATO:0000539 obsolete drought sensitivity value true PATO:0000539 quality PATO:0000540 obsolete flooding sensitivity value true PATO:0000540 quality PATO:0000541 obsolete photosensitivity value true PATO:0000541 quality PATO:0000542 obsolete absolute photosensitivity value true PATO:0000542 quality PATO:0000543 obsolete light intensivity sensitivity value true PATO:0000543 quality PATO:0000544 obsolete light_quality sensitivity value true PATO:0000544 quality PATO:0000545 obsolete relative photosensitivity value true PATO:0000545 A photosensitivity quality inhering in a bearer by virtue of the bearer's lacking photosensitivity. quality photoresistant PATO:0000546 photoinsensitive PATO:0000546 A photosensitivity quality inhering in a bearer by virtue of the bearer's lacking photosensitivity. PATOC:GVG A photosensitivity quality inhering in a bearer by virtue of the bearer's exhibiting photosensitivity. quality PATO:0000547 photosensitive PATO:0000547 A photosensitivity quality inhering in a bearer by virtue of the bearer's exhibiting photosensitivity. PATOC:GVG quality PATO:0000548 obsolete blue light sensitivity value true PATO:0000548 quality PATO:0000549 obsolete far red light sensitivity value true PATO:0000549 quality PATO:0000550 obsolete red light sensitivity value true PATO:0000550 quality PATO:0000551 obsolete u v light sensitivity value true PATO:0000551 quality PATO:0000552 obsolete absolute temperature sensitivity value true PATO:0000552 quality PATO:0000553 obsolete relative temperature sensitivity value true PATO:0000553 quality PATO:0000554 obsolete cold sensitive true PATO:0000554 quality PATO:0000555 obsolete heat sensitive true PATO:0000555 quality thermoresistant PATO:0000556 obsolete thermoinsensitive true PATO:0000556 quality PATO:0000557 obsolete thermosensitive true PATO:0000557 quality PATO:0000558 obsolete size value true PATO:0000558 quality PATO:0000559 obsolete absolute size value true PATO:0000559 quality PATO:0000560 obsolete height value true PATO:0000560 quality PATO:0000561 obsolete length value true PATO:0000561 quality PATO:0000562 obsolete mass value true PATO:0000562 quality PATO:0000563 obsolete relative size value true PATO:0000563 quality PATO:0000564 obsolete thickness value true PATO:0000564 quality PATO:0000565 obsolete volume value true PATO:0000565 quality :breadth PATO:0000566 obsolete width value true PATO:0000566 quality PATO:0000567 obsolete absolute height value true PATO:0000567 quality PATO:0000568 obsolete relative height value true PATO:0000568 A height which is relatively low. quality short PATO:0000569 decreased height PATO:0000569 A height which is relatively low. PATOC:GVG A height which is relatively high. quality tall PATO:0000570 increased height PATO:0000570 A height which is relatively high. PATOC:GVG quality PATO:0000571 obsolete absolute length value true PATO:0000571 quality PATO:0000572 obsolete relative length value true PATO:0000572 A length quality which is relatively large. long quality PATO:0000573 increased length PATO:0000573 A length quality which is relatively large. PATOC:GVG A length quality which is relatively small. short quality shortened stubby PATO:0000574 decreased length PATO:0000574 A length quality which is relatively small. PATOC:GVG quality PATO:0000575 obsolete absolute mass value true PATO:0000575 quality PATO:0000576 obsolete relative mass value true PATO:0000576 quality PATO:0000577 obsolete weight value true PATO:0000577 PATO:0000578 true PATO:0000579 true quality PATO:0000580 obsolete absolute weight value true PATO:0000580 quality PATO:0000581 obsolete relative weight value true PATO:0000581 A weight which is relatively high. heavy high weight quality PATO:0000582 increased weight PATO:0000582 A weight which is relatively high. PATOC:GVG A weight which is relatively low. light weight low weight quality PATO:0000583 decreased weight PATO:0000583 A weight which is relatively low. PATOC:GVG An increased size quality inhering in a bearer by virtue of the bearer's exhibiting enlargement of a cell or constituent group of cells (for example, organ). hypertrophy quality PATO:0000584 hypertrophic PATO:0000584 An increased size quality inhering in a bearer by virtue of the bearer's exhibiting enlargement of a cell or constituent group of cells (for example, organ). PATOC:MAH A decreased size quality inhering in a bearer by virtue of the bearer's exhibiting reduced size of a cell or constituent group of cells (for example, organ). PATO:0000412 shrunken quality PATO:0000585 hypotrophic PATO:0000585 A decreased size quality inhering in a bearer by virtue of the bearer's exhibiting reduced size of a cell or constituent group of cells (for example, organ). PATOC:MAH A size quality which is relatively high. PATO:0001202 quality big enlarged expanded great large PATO:0000586 increased size PATO:0000586 A size quality which is relatively high. PATOC:GVG A size quality which is relatively low. hypoplasia underdeveloped quality reduced small tiny PATO:0000587 decreased size PATO:0000587 A size quality which is relatively low. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's being a remnant structure from earlier development or evolution. quality PATO:0000588 May be part of an animal (such as an organ or bone) that is no longer used by the species and has therefore become smaller or less developed. vestigial PATO:0000588 A quality inhering in a bearer by virtue of the bearer's being a remnant structure from earlier development or evolution. PATOC:MAH quality PATO:0000589 obsolete absolute thickness value true PATO:0000589 quality PATO:0000590 obsolete relative thickness value true PATO:0000590 A thickness which is relatively high. high thickness stout thickened quality thick PATO:0000591 increased thickness PATO:0000591 A thickness which is relatively high. PATOC:GVG A thickness which is relatively low. low thickness quality slender thin PATO:0000592 decreased thickness PATO:0000592 A thickness which is relatively low. PATOC:GVG quality PATO:0000593 obsolete absolute volume value true PATO:0000593 quality PATO:0000594 obsolete relative volume value true PATO:0000594 A volume which is relatively high. high volume quality large volume PATO:0000595 increased volume PATO:0000595 A volume which is relatively high. PATOC:GVG A volume which is relatively low. low volume quality small volume PATO:0000596 decreased volume PATO:0000596 A volume which is relatively low. PATOC:GVG quality PATO:0000597 obsolete absolute width value true PATO:0000597 quality PATO:0000598 obsolete relative width value true PATO:0000598 A width which is relatively small. quality narrow PATO:0000599 decreased width PATO:0000599 A width which is relatively small. PATOC:GVG A width which is relatively large. quality broad wide wide/broad PATO:0000600 increased width PATO:0000600 A width which is relatively large. PATOC:GVG quality PATO:0000601 obsolete spatial value true PATO:0000601 quality PATO:0000602 obsolete angle value true PATO:0000602 quality PATO:0000603 obsolete closure value true PATO:0000603 quality PATO:0000604 obsolete orientation value true PATO:0000604 quality location position PATO:0000605 obsolete placement value true PATO:0000605 quality PATO:0000606 obsolete absolute angle value true PATO:0000606 quality PATO:0000607 obsolete relative angle value true PATO:0000607 A morphological quality inhering in a bearer by virtue of the bearer's affording blocked passage or view. quality blocked PATO:0000608 closed PATO:0000608 A morphological quality inhering in a bearer by virtue of the bearer's affording blocked passage or view. answers.com:answers.com A morphological quality inhering in a bearer by virtue of the bearer's affording not completed blocked passage or view. quality PATO:0000609 closure incomplete PATO:0000609 A morphological quality inhering in a bearer by virtue of the bearer's affording not completed blocked passage or view. PATOC:GVG A morphological quality inhering in a bearer by virtue of the bearer's affording unobstructed passage or view. quality PATO:0000610 open PATO:0000610 A morphological quality inhering in a bearer by virtue of the bearer's affording unobstructed passage or view. answers.com:answers.com quality PATO:0000611 obsolete absolute orientation value true PATO:0000611 quality PATO:0000612 obsolete relative orientation value true PATO:0000612 A spatial pattern inhering in a bearer by virtue of the bearer's lacking orientation. quality PATO:0000613 disoriented PATO:0000613 A spatial pattern inhering in a bearer by virtue of the bearer's lacking orientation. PATOC:GVG A pattern where all the repeated elements are oriented in the same direction. quality PATO:0000614 oriented PATO:0000614 A pattern where all the repeated elements are oriented in the same direction. PATOC:MAH An anteriorized quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally anterior structures. wholly anterioralized quality anterioralized anteriorized PATO:0000615 wholly anteriorized PATO:0000615 An anteriorized quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally anterior structures. PATOC:GVG A symmetry quality inhering in a bearer by virtue of the bearer's lacking symmetry. asymmetric asymmetry quality PATO:0000616 asymmetrical PATO:0000616 A symmetry quality inhering in a bearer by virtue of the bearer's lacking symmetry. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's having one or more angle(s) in its length. angled flexed quality PATO:0000617 bent PATO:0000617 A shape quality inhering in a bearer by virtue of the bearer's having one or more angle(s) in its length. PATOC:MAH A positional quality inhering in a bearer by virtue of the bearer's having two sides; two-sided. quality PATO:0000618 bilateral PATO:0000618 A positional quality inhering in a bearer by virtue of the bearer's having two sides; two-sided. thefreedictionary.com:thefreedictionary.com A positional quality inhering in a bearer by virtue of the bearer's being overfilled. quality PATO:0000619 crowded PATO:0000619 A positional quality inhering in a bearer by virtue of the bearer's being overfilled. WordNet:WordNet A dorsalized quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally dorsal structures. quality dorsalized PATO:0000620 wholly dorsalized PATO:0000620 A dorsalized quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally dorsal structures. PATOC:melissa PATO:0000621 true A positional quality inhering in a bearer by virtue of the bearer's being upright in position or posture. upright quality PATO:0000622 erect PATO:0000622 A positional quality inhering in a bearer by virtue of the bearer's being upright in position or posture. WordNet:WordNet A quality inhering in a bearer by virtue of the bearer's protruding or projecting from the body. quality prolapse prolapsed PATO:0000623 exserted PATO:0000623 A quality inhering in a bearer by virtue of the bearer's protruding or projecting from the body. sdvc:sdvc A spatial quality inhering in a bearer by virtue of the bearer's becoming joined together with an additional entity. inserted quality introduced into PATO:0000624 inserted into PATO:0000624 A spatial quality inhering in a bearer by virtue of the bearer's becoming joined together with an additional entity. PATOC:nw An oriented quality inhering in a bearer by virtue of the bearer's being reversed in position, order, or condition. quality backward reversed PATO:0000625 inverted PATO:0000625 An oriented quality inhering in a bearer by virtue of the bearer's being reversed in position, order, or condition. PATOC:GVG A positional quality inhering in a bearer by virtue of the bearer's being moved or displaced to one side so as to make lateral. quality PATO:0000626 lateralized PATO:0000626 A positional quality inhering in a bearer by virtue of the bearer's being moved or displaced to one side so as to make lateral. thefreedictionary.com:thefreedictionary.com A spatial pattern quality inhering in a bearer by virtue of the bearer's being confined or restricted to a particular location. focal localised quality PATO:0000627 localized PATO:0000627 A spatial pattern quality inhering in a bearer by virtue of the bearer's being confined or restricted to a particular location. WordNet:WordNet A positional quality inhering in a bearer by virtue the bearer's being changed in abnormal position. PATO:0000621 ectopic mislocalized quality PATO:0000628 mislocalised PATO:0000628 A positional quality inhering in a bearer by virtue the bearer's being changed in abnormal position. PATOC:GVG A positional quality inhering in a bearer by virtue of the bearer's having mistakenly taken course, way, or passage; ill-routed. quality PATO:0000629 misrouted PATO:0000629 A positional quality inhering in a bearer by virtue of the bearer's having mistakenly taken course, way, or passage; ill-routed. NDI:NDI A posteriorized quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally posterior structures. wholly posterioralized quality posterioralized posteriorized PATO:0000630 wholly posteriorized PATO:0000630 A posteriorized quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally posterior structures. PATOC:GVG A positional quality inhering in a bearer by virtue of the bearer's being stretched out and lying at full length along the ground. quality PATO:0000631 prostrate PATO:0000631 A positional quality inhering in a bearer by virtue of the bearer's being stretched out and lying at full length along the ground. thefreedictionary.com:thefreedictionary.com A symmetry quality inhering in a bearer by virtue of the bearer's being capable of division by a longitudinal plane into similar halves. symmetric quality PATO:0000632 similar pattern in both halves symmetrical PATO:0000632 A symmetry quality inhering in a bearer by virtue of the bearer's being capable of division by a longitudinal plane into similar halves. PATOC:GVG A spatial pattern inhering in a bearer by virtue of the bearer's being not overfilled. quality PATO:0000633 uncrowded PATO:0000633 A spatial pattern inhering in a bearer by virtue of the bearer's being not overfilled. PATOC:GVG A spatial pattern inhering in a bearer by virtue of the bearer's involvement of only one part or side. quality PATO:0000634 unilateral PATO:0000634 A spatial pattern inhering in a bearer by virtue of the bearer's involvement of only one part or side. WordNet:WordNet A spatial pattern inhering in a bearer by virtue of the bearer's not being confined or restricted to a particular location. quality PATO:0000635 unlocalised PATO:0000635 A spatial pattern inhering in a bearer by virtue of the bearer's not being confined or restricted to a particular location. WordNet:WordNet A ventralized quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally ventral structures. quality ventralized PATO:0000636 wholly ventralized PATO:0000636 A ventralized quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally ventral structures. PATOC:GVG quality PATO:0000637 obsolete structure value true PATO:0000637 A structural quality inhering in a bearer by virtue of the bearer's consisting of blebbing of the nucleus and DNA fragmentation due to the cell undergoing a specific form of programmed cell death termed apoptosis. GO:0006915 quality PATO:0000638 apoptotic PATO:0000638 A structural quality inhering in a bearer by virtue of the bearer's consisting of blebbing of the nucleus and DNA fragmentation due to the cell undergoing a specific form of programmed cell death termed apoptosis. PATOC:GVG A structural quality inhering in a bearer whose structure deteriorates or is lost over time due to an active pathological process. degeneration quality PATO:0000639 degenerate PATO:0000639 A structural quality inhering in a bearer whose structure deteriorates or is lost over time due to an active pathological process. PATOC:PortlandMeetingFeb2015 PATOC:mb A structural quality inhering in a bearer by virtue of the bearer's exhibiting an alteration in size, shape or organization of its constituent cells. dysplasia quality PATO:0000640 dysplastic PATO:0000640 A structural quality inhering in a bearer by virtue of the bearer's exhibiting an alteration in size, shape or organization of its constituent cells. PATOC:MAH quality PATO:0000641 obsolete deposition defective true PATO:0000641 A structural quality inhering in a bearer by virtue of the bearer's being merged with another entity. fused fused to quality coalesced joined with merged with PATO:0000642 fused with PATO:0000642 A structural quality inhering in a bearer by virtue of the bearer's being merged with another entity. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's bodily structure that has protruded through an abnormal opening in the wall that contains it. quality PATO:0000643 herniated PATO:0000643 A quality inhering in a bearer by virtue of the bearer's bodily structure that has protruded through an abnormal opening in the wall that contains it. spinalstenosis:spinalstenosis A physical quality inhering in an organ or tissue by virtue of the bearer's exhibiting an increased number of cells, typically associated with an increase in size. PATO:0000943 hyperplasia quality overdeveloped PATO:0000644 hyperplastic PATO:0000644 A physical quality inhering in an organ or tissue by virtue of the bearer's exhibiting an increased number of cells, typically associated with an increase in size. Wikipedia:Hyperplasia A physical quality inhering in an organ or tissue by virtue of the bearer's exhibiting a decreased number of cells, typically associated with a decrease in size. PATO:0000942 hypoplasia quality underdeveloped PATO:0000645 hypoplastic PATO:0000645 A physical quality inhering in an organ or tissue by virtue of the bearer's exhibiting a decreased number of cells, typically associated with a decrease in size. PATOC:GVG Wikipedia:Hypoplasia A morphological quality inhering in a bearer by virtue of the bearer's being distorted during formation. malformation quality PATO:0000646 malformed PATO:0000646 A morphological quality inhering in a bearer by virtue of the bearer's being distorted during formation. PATOC:MAH A structural quality inhering in a bearer by virtue of the bearer's undergoing unprogrammed cell death. quality PATO:0000647 necrotic PATO:0000647 A structural quality inhering in a bearer by virtue of the bearer's undergoing unprogrammed cell death. Wikipedia:http://en.wikipedia.org/wiki/Necrotic A morphological quality inhering in a bearer by virtue of the bearer's being blocked or filled with obstacles or an obstacle. quality PATO:0000648 obstructed PATO:0000648 A morphological quality inhering in a bearer by virtue of the bearer's being blocked or filled with obstacles or an obstacle. thefreedictionary.com:thefreedictionary.com PATO:0000649 true PATO:0000650 true A structural quality inhering in a bearer by virtue of the bearer's being no longer merged with another entity. unfused quality PATO:0000651 unfused from PATO:0000651 A structural quality inhering in a bearer by virtue of the bearer's being no longer merged with another entity. PATOC:nw quality PATO:0000652 obsolete substance value true PATO:0000652 quality PATO:0000653 obsolete addictive substance value true PATO:0000653 quality PATO:0000654 obsolete alcochol value true PATO:0000654 quality PATO:0000655 obsolete amphetamine value true PATO:0000655 quality PATO:0000656 obsolete time_quantity true PATO:0000656 quality PATO:0000657 obsolete length_quantity true PATO:0000657 quality PATO:0000658 obsolete metamphetamine value true PATO:0000658 quality PATO:0000659 obsolete temparature_quantity true PATO:0000659 quality PATO:0000660 obsolete angle_quantity true PATO:0000660 quality PATO:0000661 obsolete solid substance value true PATO:0000661 quality PATO:0000662 obsolete volume_quantity true PATO:0000662 quality PATO:0000663 obsolete occurrent true PATO:0000663 quality PATO:0000664 obsolete substance_quantity true PATO:0000664 A color brightness which is relatively high. light quality PATO:0000665 high brightness PATO:0000665 A color brightness which is relatively high. PATOC:MAH quality PATO:0000666 obsolete energy_quantity true PATO:0000666 quality PATO:0000667 obsolete liquid substance value true PATO:0000667 quality PATO:0000668 obsolete mass_quantity true PATO:0000668 quality PATO:0000669 obsolete concentration_unit true PATO:0000669 quality PATO:0000670 obsolete saccharin versus water value true PATO:0000670 quality PATO:0000671 obsolete water value true PATO:0000671 quality PATO:0000672 obsolete unit true PATO:0000672 quality PATO:0000673 obsolete temperature value true PATO:0000673 quality PATO:0000674 obsolete absolute temperature value true PATO:0000674 quality PATO:0000675 obsolete body temperature value true PATO:0000675 quality PATO:0000676 obsolete relative temperature value true PATO:0000676 PATO:0000677 true PATO:0000678 true quality PATO:0000679 obsolete temporal value true PATO:0000679 quality PATO:0000680 obsolete absolute temporal value true PATO:0000680 quality PATO:0000681 obsolete incidence value true PATO:0000681 quality PATO:0000682 obsolete rate value true PATO:0000682 quality PATO:0000683 obsolete relative temporal value true PATO:0000683 quality PATO:0000684 obsolete absolute incidence value true PATO:0000684 quality PATO:0000685 obsolete relative incidence value true PATO:0000685 quality PATO:0000686 obsolete absolute rate value true PATO:0000686 quality PATO:0000687 obsolete relative rate value true PATO:0000687 A quality of a single process inhering in a bearer by virtue of the bearer's not occurring or existing at the same time or having the same period or phase. quality PATO:0000688 asynchronous PATO:0000688 A quality of a single process inhering in a bearer by virtue of the bearer's not occurring or existing at the same time or having the same period or phase. WordNet:WordNet A quality of a single process inhering in a bearer by virtue of the bearer's being uninterrupted in time, sequence, substance, or extent. PATO:0000429 uninterrupted quality PATO:0000689 continuous PATO:0000689 A quality of a single process inhering in a bearer by virtue of the bearer's being uninterrupted in time, sequence, substance, or extent. thefreedictionary.com:thefreedictionary.com A quality of a single process inhering in a bearer by virtue of the bearer's being marked by breaks or interruptions. PATO:0000426 interrupted quality intermittent PATO:0000690 discontinuous PATO:0000690 A quality of a single process inhering in a bearer by virtue of the bearer's being marked by breaks or interruptions. thefreedictionary.com:thefreedictionary.com PATO:0000691 true A quality of a single process inhering in a bearer by virtue of the bearer's origin or development at an unusual time or out of the regular sequence. quality PATO:0000692 heterochronic PATO:0000692 A quality of a single process inhering in a bearer by virtue of the bearer's origin or development at an unusual time or out of the regular sequence. answers.com:answers.com quality PATO:0000693 obsolete late true PATO:0000693 A quality of a process which starts earlier than the natural start time or the reference process. PATO:0000691 PATO:0002086 advanced quality early precocious PATO:0000694 premature PATO:0000694 A quality of a process which starts earlier than the natural start time or the reference process. PATO:LC A quality of a single process inhering in a bearer by virtue of the bearer's occurring or existing at the same time or having the same period or phase. quality PATO:0000695 synchronous PATO:0000695 A quality of a single process inhering in a bearer by virtue of the bearer's occurring or existing at the same time or having the same period or phase. PATOC:GVG quality PATO:0000696 obsolete texture value true PATO:0000696 quality PATO:0000697 obsolete relative texture value true PATO:0000697 quality PATO:0000698 obsolete floury true PATO:0000698 quality PATO:0000699 obsolete glutinous true PATO:0000699 A texture quality inhering in a bearer by virtue of the bearer's irregular surface. PATO:0001616 coarse quality PATO:0000700 rough PATO:0000700 A texture quality inhering in a bearer by virtue of the bearer's irregular surface. PATOC:GVG A texture quality inhering in a bearer by virtue of the bearer's processing a surface free of roughness or irregularities. quality PATO:0000701 smooth PATO:0000701 A texture quality inhering in a bearer by virtue of the bearer's processing a surface free of roughness or irregularities. PATOC:GVG quality PATO:0000702 obsolete threshold value true PATO:0000702 quality PATO:0000703 obsolete absolute threshold value true PATO:0000703 quality PATO:0000704 obsolete pain threshold value true PATO:0000704 quality PATO:0000705 obsolete relative threshold value true PATO:0000705 A threshold which is relatively high. PATO:0000709 high threshold quality PATO:0000706 increased threshold PATO:0000706 A threshold which is relatively high. PATOC:GVG PATO:0000707 true A threshold which is relatively low. PATO:0000707 low threshold quality PATO:0000708 decreased threshold PATO:0000708 A threshold which is relatively low. PATOC:GVG PATO:0000709 true quality PATO:0000710 obsolete time value true PATO:0000710 quality PATO:0000711 obsolete absolute time value true PATO:0000711 quality PATO:0000712 obsolete bouts value true PATO:0000712 quality PATO:0000713 obsolete relative time value true PATO:0000713 quality PATO:0000714 obsolete latency value true PATO:0000714 PATO:0000715 true PATO:0000716 true quality PATO:0000717 obsolete viability value true PATO:0000717 A viability quality inhering in a population by virtue of the bearer's long term survival inability. quality PATO:0000718 lethal (sensu genetics) PATO:0000718 A viability quality inhering in a population by virtue of the bearer's long term survival inability. PATOC:GVG A viability quality inhering in a bearer or a population by virtue of the bearer's ability to survive or the long term survival ability of a given population. quality PATO:0000719 viable PATO:0000719 A viability quality inhering in a bearer or a population by virtue of the bearer's ability to survive or the long term survival ability of a given population. PATOC:GVG quality PATO:0000720 obsolete yield value true PATO:0000720 quality PATO:0000721 obsolete absolute yield value true PATO:0000721 quality PATO:0000722 obsolete relative yield value true PATO:0000722 quality PATO:0000723 obsolete high yield true PATO:0000723 quality PATO:0000724 obsolete low yield true PATO:0000724 quality PATO:0000725 obsolete function value true PATO:0000725 quality PATO:0000726 obsolete autonomic function value true PATO:0000726 quality PATO:0000727 obsolete behavioral function value true PATO:0000727 quality PATO:0000728 obsolete metabolic function value true PATO:0000728 quality PATO:0000729 obsolete physiological function value true PATO:0000729 quality PATO:0000730 obsolete relative function value true PATO:0000730 quality PATO:0000731 obsolete body position value true PATO:0000731 quality PATO:0000732 obsolete body tone value true PATO:0000732 quality PATO:0000733 obsolete piloerection value true PATO:0000733 quality PATO:0000734 obsolete abdominal tone value true PATO:0000734 quality PATO:0000735 obsolete limb tone value true PATO:0000735 quality PATO:0000736 obsolete dysfunctional value true PATO:0000736 quality PATO:0000737 obsolete functional value true PATO:0000737 quality PATO:0000738 obsolete enzyme function value true PATO:0000738 quality PATO:0000739 obsolete absolute enzyme function value true PATO:0000739 quality PATO:0000740 obsolete relative enzyme function value true PATO:0000740 quality PATO:0000741 obsolete high enzyme function value true PATO:0000741 quality PATO:0000742 obsolete low enzyme function value true PATO:0000742 quality PATO:0000743 obsolete arousal value true PATO:0000743 quality PATO:0000744 obsolete balance value true PATO:0000744 quality PATO:0000745 obsolete behavioral quality value true PATO:0000745 quality PATO:0000746 obsolete consumption value true PATO:0000746 quality PATO:0000747 obsolete coordination value true PATO:0000747 quality PATO:0000748 obsolete discrimination value true PATO:0000748 quality PATO:0000749 obsolete gait value true PATO:0000749 quality PATO:0000750 obsolete learning and memory value true PATO:0000750 quality PATO:0000751 obsolete locomotor activity value true PATO:0000751 quality PATO:0000752 obsolete mating value true PATO:0000752 quality PATO:0000753 obsolete spontaneous activity value true PATO:0000753 quality PATO:0000754 obsolete startle response true PATO:0000754 quality PATO:0000755 obsolete vocalization value true PATO:0000755 quality PATO:0000756 obsolete transfer arousal value true PATO:0000756 A balance quality inhering in a bearer by virtue of the bearer's having balance. quality PATO:0000757 balanced PATO:0000757 A balance quality inhering in a bearer by virtue of the bearer's having balance. PATOC:GVG A balance quality inhering in a bearer by virtue of the bearer's lacking balance. quality PATO:0000758 unbalanced PATO:0000758 A balance quality inhering in a bearer by virtue of the bearer's lacking balance. PATOC:GVG A behavioral quality inhering in a bearer by virtue of the bearer's exhibiting paralytic behaviour when subjected to mechanical shock. quality PATO:0000759 bang sensitive PATO:0000759 A behavioral quality inhering in a bearer by virtue of the bearer's exhibiting paralytic behaviour when subjected to mechanical shock. PATOC:flybase A behavioral quality of a process inhering in a bearer by virtue of the bearer's exhibiting increased activity. hyperactive quality PATO:0000760 increased behavioural activity PATO:0000760 A behavioral quality of a process inhering in a bearer by virtue of the bearer's exhibiting increased activity. PATOC:GVG A behavioral quality of a process inhering in a bearer by virtue of the bearer's exhibiting reduced activity. hypoactive quality PATO:0000761 decreased behavioural activity PATO:0000761 A behavioral quality of a process inhering in a bearer by virtue of the bearer's exhibiting reduced activity. PATOC:GVG Diminished, damaged, or weakened. quality PATO:0000762 obsolete impaired true PATO:0000762 Diminished, damaged, or weakened. answers.com:answers.com A behavioral quality inhering in a bearer by virtue of the bearer's being affected by loss of the ability to move a body part. palsy quality PATO:0000763 paralysed PATO:0000763 A behavioral quality inhering in a bearer by virtue of the bearer's being affected by loss of the ability to move a body part. PATOC:GVG A behavioral quality inhering in a bearer by virtue of the bearer's receiving or being subjected to an action without responding or initiating an action in return. quality PATO:0000764 passive PATO:0000764 A behavioral quality inhering in a bearer by virtue of the bearer's receiving or being subjected to an action without responding or initiating an action in return. www.answers.com:www.answers.com quality PATO:0000765 obsolete absolute consumption value true PATO:0000765 quality PATO:0000766 obsolete relative consumption value true PATO:0000766 A consumption which is relatively high. high consumption quality increased propensity to consume PATO:0000767 Use GO:0007631 obsolete increased consumption true PATO:0000767 A consumption which is relatively high. PATOC:GVG A consumption which is relatively low. low consumption quality decreased propensity to consume PATO:0000768 Use GO:0007631 obsolete decreased consumption true PATO:0000768 A consumption which is relatively low. PATOC:GVG A coordination quality of inhering in a bearer by virtue of the bearer's having skillful and effective interaction of movement. quality PATO:0000769 coordinated PATO:0000769 A coordination quality of inhering in a bearer by virtue of the bearer's having skillful and effective interaction of movement. PATOC:GVG A coordination quality of inhering in a bearer by virtue of the bearer's lacking skillful and effective interaction of movement. quality PATO:0000770 uncoordinated PATO:0000770 A coordination quality of inhering in a bearer by virtue of the bearer's lacking skillful and effective interaction of movement. PATOC:GVG A preference quality in a bearer by virtue of the bearer's disliking a perceived stimulus. quality PATO:0000771 aversion PATO:0000771 A preference quality in a bearer by virtue of the bearer's disliking a perceived stimulus. PATOC:GVG A preference quality in a bearer by virtue of the bearer's having no preference to a perceived stimulus. quality PATO:0000772 indifference PATO:0000772 A preference quality in a bearer by virtue of the bearer's having no preference to a perceived stimulus. PATOC:GVG A discrimination quality in a bearer by virtue of the bearer's liking a perceived stimulus. quality PATO:0000773 preference PATO:0000773 A discrimination quality in a bearer by virtue of the bearer's liking a perceived stimulus. PATOC:GVG quality PATO:0000774 obsolete bizarre gate true PATO:0000774 quality PATO:0000775 obsolete learning value true PATO:0000775 quality PATO:0000776 obsolete memory value true PATO:0000776 quality PATO:0000777 obsolete long term memory value true PATO:0000777 quality PATO:0000778 obsolete short term memory value true PATO:0000778 quality PATO:0000779 obsolete absolute locomotor activity value true PATO:0000779 quality PATO:0000780 obsolete relative locomotor activity value true PATO:0000780 quality PATO:0000781 obsolete circulatory function value true PATO:0000781 quality PATO:0000782 obsolete defensive function value true PATO:0000782 quality PATO:0000783 obsolete digestive function value true PATO:0000783 quality PATO:0000784 obsolete excretory function value true PATO:0000784 quality PATO:0000785 obsolete muscle function value true PATO:0000785 quality PATO:0000786 obsolete neural function value true PATO:0000786 quality PATO:0000787 obsolete neurobehavioral function value true PATO:0000787 quality PATO:0000788 obsolete reproductive function value true PATO:0000788 quality PATO:0000789 obsolete respiratory function value true PATO:0000789 quality PATO:0000790 obsolete heart rate value true PATO:0000790 quality PATO:0000791 obsolete immune function value true PATO:0000791 quality PATO:0000792 obsolete repair function value true PATO:0000792 quality PATO:0000793 obsolete immubocompetent value true PATO:0000793 quality PATO:0000794 obsolete immunodeficient value true PATO:0000794 quality PATO:0000795 obsolete healing value true PATO:0000795 quality PATO:0000796 obsolete regeneration value true PATO:0000796 quality PATO:0000797 obsolete urination value true PATO:0000797 quality PATO:0000798 obsolete defecation value true PATO:0000798 quality PATO:0000799 obsolete muscle elevation value true PATO:0000799 quality PATO:0000800 obsolete muscle strength value true PATO:0000800 quality PATO:0000801 obsolete motor function value true PATO:0000801 quality PATO:0000802 obsolete sensory function value true PATO:0000802 quality PATO:0000803 obsolete tactile response value true PATO:0000803 quality PATO:0000804 obsolete motor performance value true PATO:0000804 quality PATO:0000805 obsolete auditory value true PATO:0000805 quality PATO:0000806 obsolete olfactory value true PATO:0000806 quality PATO:0000807 obsolete proprioreception value true PATO:0000807 quality PATO:0000808 obsolete reflex value true PATO:0000808 quality PATO:0000809 obsolete taste value true PATO:0000809 quality PATO:0000810 obsolete touch value true PATO:0000810 quality PATO:0000811 obsolete visual value true PATO:0000811 quality PATO:0000812 obsolete odor acuity value true PATO:0000812 quality PATO:0000813 obsolete odor type value true PATO:0000813 quality PATO:0000814 obsolete taste acuity value true PATO:0000814 quality PATO:0000815 obsolete absolute odor acuity value true PATO:0000815 quality PATO:0000816 obsolete relative odor acuity value true PATO:0000816 quality PATO:0000817 obsolete anosmia true PATO:0000817 quality PATO:0000818 obsolete concentration_quantity true PATO:0000818 quality PATO:0000819 obsolete quantity true PATO:0000819 quality PATO:0000820 obsolete absolute taste acuity value true PATO:0000820 quality PATO:0000821 obsolete relative taste acuity value true PATO:0000821 quality PATO:0000822 obsolete taste type value true PATO:0000822 quality PATO:0000823 obsolete quinine taste true PATO:0000823 quality PATO:0000824 obsolete water taste true PATO:0000824 quality PATO:0000825 obsolete visual ability value true PATO:0000825 quality PATO:0000826 obsolete visual acuity value true PATO:0000826 quality PATO:0000827 obsolete visual threshold value true PATO:0000827 quality PATO:0000828 obsolete visual placing value true PATO:0000828 quality PATO:0000829 obsolete absolute visual ability value true PATO:0000829 quality PATO:0000830 obsolete relative visual ability value true PATO:0000830 quality PATO:0000831 obsolete absolute visual acuity value true PATO:0000831 quality PATO:0000832 obsolete relative visual acuity value true PATO:0000832 quality PATO:0000833 obsolete absolute visual threshold value true PATO:0000833 quality PATO:0000834 obsolete relative visual threshold value true PATO:0000834 quality PATO:0000835 obsolete auditory acuity value true PATO:0000835 quality PATO:0000836 obsolete auditory ability value true PATO:0000836 quality PATO:0000837 obsolete auditory threshold value true PATO:0000837 quality PATO:0000838 obsolete absolute auditory ability value true PATO:0000838 quality PATO:0000839 obsolete relative auditory ability value true PATO:0000839 quality PATO:0000840 obsolete absolute auditory acuity value true PATO:0000840 quality PATO:0000841 obsolete relative auditory acuity value true PATO:0000841 quality PATO:0000842 obsolete absolute auditory threshold value true PATO:0000842 quality PATO:0000843 obsolete relative auditory threshold value true PATO:0000843 quality PATO:0000844 obsolete auditory acuity true PATO:0000844 quality PATO:0000845 obsolete auditory ability true PATO:0000845 quality PATO:0000846 obsolete auditory threshold true PATO:0000846 quality PATO:0000847 obsolete absolute auditory acuity true PATO:0000847 quality PATO:0000848 obsolete relative auditory acuity true PATO:0000848 quality PATO:0000849 obsolete absolute auditory ability true PATO:0000849 quality PATO:0000850 obsolete relative auditory ability true PATO:0000850 quality PATO:0000851 obsolete absolute auditory threshold true PATO:0000851 quality PATO:0000852 obsolete relative auditory threshold true PATO:0000852 quality PATO:0000853 obsolete blinking reflex value true PATO:0000853 quality PATO:0000854 obsolete contact righting reflex value true PATO:0000854 quality PATO:0000855 obsolete corneal reflex value true PATO:0000855 quality PATO:0000856 obsolete flinch reflex value true PATO:0000856 quality PATO:0000857 obsolete lordosis reflex value true PATO:0000857 quality PATO:0000858 obsolete ocular reflex value true PATO:0000858 quality PATO:0000859 obsolete pinna reflex value true PATO:0000859 quality PATO:0000860 obsolete postural reflex value true PATO:0000860 quality PATO:0000861 obsolete proboscis extension reflex value true PATO:0000861 quality PATO:0000862 obsolete pupillary reflex value true PATO:0000862 quality PATO:0000863 obsolete righting reflex value true PATO:0000863 quality PATO:0000864 obsolete spinal reflex value true PATO:0000864 quality PATO:0000865 obsolete startle reflex value true PATO:0000865 quality PATO:0000866 obsolete suckling reflex value true PATO:0000866 quality PATO:0000867 obsolete swallowing reflex value true PATO:0000867 quality PATO:0000868 obsolete vibrissae reflex value true PATO:0000868 quality PATO:0000869 obsolete prepulse inhibition value true PATO:0000869 quality PATO:0000870 obsolete relative neurobehavioral function value true PATO:0000870 quality PATO:0000871 obsolete aggressive true PATO:0000871 quality PATO:0000872 obsolete anxious true PATO:0000872 quality PATO:0000873 obsolete cataleptic true PATO:0000873 quality PATO:0000874 obsolete fearful true PATO:0000874 quality PATO:0000875 obsolete irritable true PATO:0000875 quality PATO:0000876 obsolete respiratory rate value true PATO:0000876 quality PATO:0000877 obsolete absolute respiratory rate value true PATO:0000877 quality PATO:0000878 obsolete relative respiratory rate value true PATO:0000878 quality PATO:0000879 obsolete fecundity value true PATO:0000879 quality PATO:0000880 obsolete fertility value true PATO:0000880 quality PATO:0000881 obsolete gestational period value true PATO:0000881 quality PATO:0000882 obsolete litter size value true PATO:0000882 quality PATO:0000883 obsolete female fertility value true PATO:0000883 quality PATO:0000884 obsolete hybrid fertility value true PATO:0000884 quality PATO:0000885 obsolete male fertility value true PATO:0000885 quality PATO:0000886 obsolete absolute litter size value true PATO:0000886 quality PATO:0000887 obsolete relative litter size value true PATO:0000887 A female fertility quality inhering in a female by virtue of the bearer's disposition to initiate, sustain, or support reproduction. quality PATO:0000888 female fertile PATO:0000888 A female fertility quality inhering in a female by virtue of the bearer's disposition to initiate, sustain, or support reproduction. PATOC:GVG quality PATO:0000889 obsolete cytoplasmic male sterility value true PATO:0000889 A male fertility quality inhering in a male by virtue of the bearer's being incapable of initiating, sustaining, or supporting reproduction. quality male infertile PATO:0000890 male sterile PATO:0000890 A male fertility quality inhering in a male by virtue of the bearer's being incapable of initiating, sustaining, or supporting reproduction. PATOC:GVG A male fertility quality inhering in a male by virtue of the bearer's being capable of initiating, sustaining, or supporting reproduction. quality PATO:0000891 male fertile PATO:0000891 A male fertility quality inhering in a male by virtue of the bearer's being capable of initiating, sustaining, or supporting reproduction. PATOC:GVG A female fertility quality inhering in a female by virtue of the bearer's being incapable of initiating, sustaining, or supporting reproduction. quality female infertile PATO:0000892 female sterile PATO:0000892 A female fertility quality inhering in a female by virtue of the bearer's being incapable of initiating, sustaining, or supporting reproduction. PATOC:GVG quality PATO:0000893 obsolete backcross fertility value true PATO:0000893 quality PATO:0000894 obsolete cytoplasmic sterility value true PATO:0000894 quality PATO:0000895 obsolete f1 fertility value true PATO:0000895 quality PATO:0000896 obsolete f2 fertility value true PATO:0000896 quality PATO:0000897 obsolete germ line dependent fertility value true PATO:0000897 quality PATO:0000898 obsolete intercross fertility value true PATO:0000898 quality PATO:0000899 obsolete soma dependent fertility value true PATO:0000899 quality PATO:0000900 obsolete backcross fertile true PATO:0000900 quality backcross infertile PATO:0000901 obsolete backcross sterile true PATO:0000901 quality PATO:0000902 obsolete chinsurah boro type value true PATO:0000902 quality PATO:0000903 obsolete cms-hl type value true PATO:0000903 quality PATO:0000904 obsolete wild abortive value true PATO:0000904 quality PATO:0000905 obsolete f1 fertile true PATO:0000905 quality F1 infertile PATO:0000906 obsolete f1 sterile true PATO:0000906 quality PATO:0000907 obsolete f2 fertile true PATO:0000907 quality F2 infertile PATO:0000908 obsolete f2 sterile true PATO:0000908 quality PATO:0000909 obsolete intercross fertile true PATO:0000909 quality intercross infertile PATO:0000910 obsolete intercross sterile true PATO:0000910 A rate which is relatively low. slow rate quality PATO:0000911 decreased rate PATO:0000911 A rate which is relatively low. PATO:GVG A rate which is relatively high. fast rate high rate quality PATO:0000912 increased rate PATO:0000912 A rate which is relatively high. PATO:GVG quality PATO:0000913 obsolete qualitative value true PATO:0000913 quality PATO:0000914 obsolete continuant true PATO:0000914 A 1-D extent quality which is equal to the dimension through an object as opposed to its length or width. https://github.com/pato-ontology/pato/issues/337 quality PATO:0000915 Thickness often refers to the smallest 1-D extent compared to the other two orthogonal dimensions, however, this is not always true. See https://github.com/pato-ontology/pato/issues/337 for full discussion. thickness PATO:0000915 A 1-D extent quality which is equal to the dimension through an object as opposed to its length or width. WordNet:WordNet quality PATO:0000916 obsolete absolute thickness true PATO:0000916 quality PATO:0000917 obsolete relative thickness true PATO:0000917 A 3-D extent quality inhering in a bearer by virtue of the bearer's amount of 3-dimensional space it occupies. quality PATO:0000918 volume PATO:0000918 A 3-D extent quality inhering in a bearer by virtue of the bearer's amount of 3-dimensional space it occupies. PATOC:GVG quality PATO:0000919 obsolete absolute volume true PATO:0000919 quality PATO:0000920 obsolete relative volume true PATO:0000920 A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite. https://github.com/pato-ontology/pato/issues/337 quality breadth PATO:0000921 Width often refers to the dimension that is greater than the extent in only one of the other two orthogonal dimensions, however, this is not always true. See https://github.com/pato-ontology/pato/issues/337 for full discussion. width PATO:0000921 A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite. PATOC:GVG quality PATO:0000922 obsolete absolute width true PATO:0000922 quality PATO:0000923 obsolete relative width true PATO:0000923 quality PATO:0000924 obsolete relative enzyme function true PATO:0000924 quality PATO:0000925 obsolete absolute enzyme function true PATO:0000925 quality PATO:0000926 obsolete intercross fertility true PATO:0000926 A quality inhering in a bearer by virtue of the bearer's disposition to being sensitivity to the action of radiant energy. quality PATO:0000927 photosensitivity PATO:0000927 A quality inhering in a bearer by virtue of the bearer's disposition to being sensitivity to the action of radiant energy. WordNet:WordNet quality PATO:0000928 obsolete absolute photosensitivity true PATO:0000928 quality PATO:0000929 obsolete light intensivity sensitivity true PATO:0000929 quality PATO:0000930 obsolete light_quality sensitivity true PATO:0000930 quality PATO:0000931 obsolete blue light sensitivity true PATO:0000931 quality PATO:0000932 obsolete far red light sensitivity true PATO:0000932 quality PATO:0000933 obsolete red light sensitivity true PATO:0000933 quality PATO:0000934 obsolete u v light sensitivity true PATO:0000934 quality PATO:0000935 obsolete relative photosensitivity true PATO:0000935 A shape quality inhering in a bearer by virtue of the bearer's terminating abruptly by having or as if having an end or point cut off. truncate quality PATO:0000936 truncated PATO:0000936 A shape quality inhering in a bearer by virtue of the bearer's terminating abruptly by having or as if having an end or point cut off. thefreedictionary.com:thefreedictionary.com A structural quality inhering in a bearer by virtue of the bearer's lacking organisation. quality PATO:0000937 disorganized PATO:0000937 A structural quality inhering in a bearer by virtue of the bearer's lacking organisation. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer's exhibiting organisation. quality PATO:0000938 organized PATO:0000938 A structural quality inhering in a bearer by virtue of the bearer's exhibiting organisation. PATOC:GVG quality PATO:0000939 obsolete regular shape true PATO:0000939 quality PATO:0000940 obsolete irregular shape true PATO:0000940 A structural quality inhering in a cytoplasm that contains fluid filled cavities. quality PATO:0000941 vacuolated PATO:0000941 A structural quality inhering in a cytoplasm that contains fluid filled cavities. PATOC:mh PATO:0000942 true PATO:0000943 true A shape quality inhering in a bearer by virtue of the bearer's having a sharp or tapered end or point. apiculate quality PATO:0000944 sharpness PATO:0000944 A shape quality inhering in a bearer by virtue of the bearer's having a sharp or tapered end or point. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's exhibiting a downward bending of its leaves or other plant parts. quality PATO:0000945 epinastic PATO:0000945 A shape quality inhering in a bearer by virtue of the bearer's exhibiting a downward bending of its leaves or other plant parts. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's having a somewhat elongated form with approximately parallel sides. quality PATO:0000946 oblong PATO:0000946 A shape quality inhering in a bearer by virtue of the bearer's having a somewhat elongated form with approximately parallel sides. PATOC:GVG A spheroid quality inhering in a bearer by virtue of the bearer's being oval with two axes of symmetry, as produced by a conical section. ellipse-shaped ellipsoid elliptical quality oval ovoid PATO:0000947 elliptic PATO:0000947 A spheroid quality inhering in a bearer by virtue of the bearer's being oval with two axes of symmetry, as produced by a conical section. PATOC:GVG A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having a sinus or rounded lobe at the base. cordate cordiform quality PATO:0000948 Having the shape of heart. heart shaped PATO:0000948 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having a sinus or rounded lobe at the base. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's being abnormally flattened or coalesced. quality PATO:0000949 fasciated PATO:0000949 A shape quality inhering in a bearer by virtue of the bearer's being abnormally flattened or coalesced. PATOC:GVG A color between white and black colors. quality plumbeous PATO:0000950 grey PATO:0000950 A color between white and black colors. http://en.wikipedia.org/wiki/Grey A color that falls about midway between red and blue in hue. quality PATO:0000951 purple PATO:0000951 A color that falls about midway between red and blue in hue. Dictionary:http://dictionary.reference.com/ A color consisting of dark orange, red, of very low intensity. quality PATO:0000952 brown PATO:0000952 A color consisting of dark orange, red, of very low intensity. Wikipedia:http://en.wikipedia.org/wiki/Brown A color hue with high-medium wavelength that of that portion of the visible spectrum lying between red and yellow, evoked in the human observer by radiant energy with wavelengths of approximately 585 to 620 nanometers. quality PATO:0000953 orange PATO:0000953 A color hue with high-medium wavelength that of that portion of the visible spectrum lying between red and yellow, evoked in the human observer by radiant energy with wavelengths of approximately 585 to 620 nanometers. Wikipedia:http://en.wikipedia.org/wiki/Orange Red color having medium to high brightness and low to moderate saturation. quality PATO:0000954 pink PATO:0000954 Red color having medium to high brightness and low to moderate saturation. PATOC:MAH A fertility quality inhering in a bearer by virtue of the bearer's being capable of initiating, sustaining, or supporting reproduction. quality PATO:0000955 fertile PATO:0000955 A fertility quality inhering in a bearer by virtue of the bearer's being capable of initiating, sustaining, or supporting reproduction. PATOC:GVG A fertility quality inhering in a bearer by virtue of the bearer's being incapable of initiating, sustaining, or supporting reproduction. quality PATO:0000956 sterile PATO:0000956 A fertility quality inhering in a bearer by virtue of the bearer's being incapable of initiating, sustaining, or supporting reproduction. PATOC:GVG An optical quality which obtains by virtue of the ability of the bearer to absorb visible light. quality PATO:0000957 opacity PATO:0000957 An optical quality which obtains by virtue of the ability of the bearer to absorb visible light. PATOC:GVG quality PATO:0000958 obsolete opacity value true PATO:0000958 quality PATO:0000959 obsolete relative opacity true PATO:0000959 quality PATO:0000960 obsolete absolute opacity true PATO:0000960 quality PATO:0000961 obsolete relative opacity value true PATO:0000961 quality PATO:0000962 obsolete absolute opacity value true PATO:0000962 A optical quality inhering in a bearer by virtue of the bearer's not being clear; not transmitting or reflecting light or radiant energy. non-transparent quality clouding cloudy PATO:0000963 opaque PATO:0000963 A optical quality inhering in a bearer by virtue of the bearer's not being clear; not transmitting or reflecting light or radiant energy. PATOC:GVG A optical quality inhering in a bearer by virtue of the bearer's lacking opacity. clear hyaline quality PATO:0000964 transparent PATO:0000964 A optical quality inhering in a bearer by virtue of the bearer's lacking opacity. PATOC:GVG A pattern quality of inhering in a bearer by virtue of the correspondence in size, shape, and relative position of the bearer's parts on opposite sides of a dividing line or median plane or about a center or axis. quality PATO:0000965 symmetry PATO:0000965 A pattern quality of inhering in a bearer by virtue of the correspondence in size, shape, and relative position of the bearer's parts on opposite sides of a dividing line or median plane or about a center or axis. PATOC:GVG quality PATO:0000966 obsolete symmetry value true PATO:0000966 A shape quality inhering in a bearer by virtue of the bearer's having a sinuate margin and rippled surface. PATO:0001610 PATO:0001939 undulated undulating waved wavy quality rippled sinuate PATO:0000967 undulate PATO:0000967 A shape quality inhering in a bearer by virtue of the bearer's having a sinuate margin and rippled surface. PATOC:GVG quality PATO:0000968 obsolete albino value true PATO:0000968 A size quality inhering in a bearer by virtue of the bearer's being abnormally small. dwarfed quality PATO:0000969 dwarf-like PATO:0000969 A size quality inhering in a bearer by virtue of the bearer's being abnormally small. Answers.com:Answers.com A structural quality inhering in a bearer by virtue of the bearer's disposition to being permeated or pervaded by a gas or liquid (as by osmosis or diffusion). quality PATO:0000970 permeability PATO:0000970 A structural quality inhering in a bearer by virtue of the bearer's disposition to being permeated or pervaded by a gas or liquid (as by osmosis or diffusion). Biology-online:Biology-online quality PATO:0000971 obsolete absolute permeability true PATO:0000971 quality PATO:0000972 obsolete relative permeability true PATO:0000972 A structure quality inhering in a bearer by virtue of the bearer's disposition to admit the passage of gas or liquid through pores or interstices. quality PATO:0000973 porosity PATO:0000973 A structure quality inhering in a bearer by virtue of the bearer's disposition to admit the passage of gas or liquid through pores or interstices. PATOC:GVG quality PATO:0000974 obsolete relative porosity true PATO:0000974 quality PATO:0000975 obsolete absolute porosity true PATO:0000975 quality PATO:0000976 obsolete permeability value true PATO:0000976 quality PATO:0000977 obsolete absolute permeability value true PATO:0000977 quality PATO:0000978 obsolete relative permeability value true PATO:0000978 quality PATO:0000979 obsolete porosity value true PATO:0000979 quality PATO:0000980 obsolete absolute porosity value true PATO:0000980 quality PATO:0000981 obsolete relative porosity value true PATO:0000981 A permeability quality inhering in a bearer by virtue of the bearer's being capable to be permeated or pervaded by a gas or liquid (as by osmosis or diffusion). quality porous PATO:0000982 permeable PATO:0000982 A permeability quality inhering in a bearer by virtue of the bearer's being capable to be permeated or pervaded by a gas or liquid (as by osmosis or diffusion). Biology-online:Biology-online A permeability quality inhering in a bearer by virtue of the bearer's being incapable of being permeated or pervaded by a gas or liquid (as by osmosis or diffusion). quality PATO:0000983 impermeable PATO:0000983 A permeability quality inhering in a bearer by virtue of the bearer's being incapable of being permeated or pervaded by a gas or liquid (as by osmosis or diffusion). Biology-online:Biology-online A porosity quality inhering in a bearer by virtue of the bearer's being capable of admitting the passage of gas or liquid through pores or interstices. quality PATO:0000984 porous PATO:0000984 A porosity quality inhering in a bearer by virtue of the bearer's being capable of admitting the passage of gas or liquid through pores or interstices. PATOC:GVG A porosity quality inhering in a bearer by virtue of the bearer's being incapable of admitting the passage of gas or liquid through pores or interstices. quality PATO:0000985 non-porous PATO:0000985 A porosity quality inhering in a bearer by virtue of the bearer's being incapable of admitting the passage of gas or liquid through pores or interstices. PATOC:GVG quality PATO:0000986 obsolete absolute consistency true PATO:0000986 quality PATO:0000987 obsolete relative consistency true PATO:0000987 quality PATO:0000988 obsolete relative consistency value true PATO:0000988 quality PATO:0000989 obsolete absolute consistency value true PATO:0000989 quality PATO:0000990 obsolete consistent true PATO:0000990 quality PATO:0000991 obsolete inconsistent true PATO:0000991 A physical quality of a fluid inhering in a bearer by virtue of the bearer's disposition to internal resistance to flow. quality PATO:0000992 viscosity PATO:0000992 A physical quality of a fluid inhering in a bearer by virtue of the bearer's disposition to internal resistance to flow. PATOC:GVG quality PATO:0000993 obsolete relative viscosity true PATO:0000993 quality PATO:0000994 obsolete absolute viscosity true PATO:0000994 quality PATO:0000995 obsolete viscosity value true PATO:0000995 quality PATO:0000996 obsolete absolute viscosity value true PATO:0000996 quality PATO:0000997 obsolete relative viscosity value true PATO:0000997 A viscosity quality inhering in a bearer by virtue of the bearer's having viscosity. quality PATO:0000998 viscous PATO:0000998 A viscosity quality inhering in a bearer by virtue of the bearer's having viscosity. PATOC:GVG A quality of a single process inhering in a bearer by virtue of the bearer's successive change from one thing or state to another and back again. quality PATO:0000999 alternation PATO:0000999 A quality of a single process inhering in a bearer by virtue of the bearer's successive change from one thing or state to another and back again. WordNet:WordNet quality PATO:0001000 obsolete relative alternation true PATO:0001000 quality PATO:0001001 obsolete absolute alternation true PATO:0001001 quality PATO:0001002 obsolete alternation value true PATO:0001002 quality PATO:0001003 obsolete relative alternation value true PATO:0001003 quality PATO:0001004 obsolete absolute alternation value true PATO:0001004 A time quality inhering in a bearer by virtue of the time it elapses for the bearer to respond to a stimulus. quality PATO:0001005 This class is a candidate for obsoletion. The definition is not clear, and the placement under "delayed" is not consistent with the definition. latency PATO:0001005 A time quality inhering in a bearer by virtue of the time it elapses for the bearer to respond to a stimulus. PATOC:GVG quality PATO:0001006 obsolete absolute latency true PATO:0001006 quality PATO:0001007 obsolete relative latency true PATO:0001007 quality PATO:0001008 obsolete absolute latency value true PATO:0001008 quality PATO:0001009 obsolete relative latency value true PATO:0001009 quality PATO:0001010 obsolete relative intensity true PATO:0001010 quality PATO:0001011 obsolete absolute intensity true PATO:0001011 quality PATO:0001012 obsolete relative intensity value true PATO:0001012 quality PATO:0001013 obsolete absolute intensity value true PATO:0001013 quality PATO:0001014 obsolete absolute occurence true PATO:0001014 quality PATO:0001015 obsolete relative occurence true PATO:0001015 quality PATO:0001016 obsolete absolute occurence value true PATO:0001016 quality PATO:0001017 obsolete relative occurence value true PATO:0001017 A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities. PATO:0002079 Wikipedia:Physical_property relational physical quality quality PATO:0001018 physical quality PATO:0001018 A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities. PATOC:GVG A physical quality which inheres in a bearer by virtue of some influence is exerted by the bearer's mass per unit size. quality density PATO:0001019 mass density PATO:0001019 A physical quality which inheres in a bearer by virtue of some influence is exerted by the bearer's mass per unit size. WordNet:WordNet A structural quality inhering in a bearer by virtue of whether the bearer has been harmed or injured or spoiled. quality PATO:0001020 damage PATO:0001020 A structural quality inhering in a bearer by virtue of whether the bearer has been harmed or injured or spoiled. WordNet:WordNet A physical quality inhering in a bearer by virtue of the bearer's capacity to do work. quality PATO:0001021 energy PATO:0001021 A physical quality inhering in a bearer by virtue of the bearer's capacity to do work. Wikipedia:http://en.wikipedia.org/wiki/Energy A physical quality inhering in a bearer by virtue of the amount of momentum caused a certain force will produce over time. quality PATO:0001022 impulse PATO:0001022 A physical quality inhering in a bearer by virtue of the amount of momentum caused a certain force will produce over time. url:http://www.wikipremed.com/home_resources/010104_momentum_concepts.pdf A physical quality inhering in a bearer by virtue of the bearer's velocity multiplied by its mass. quality PATO:0001023 momentum PATO:0001023 A physical quality inhering in a bearer by virtue of the bearer's velocity multiplied by its mass. PATOC:GVG A physical quality inhering in a bearer by virtue of the bearer's rate of doing work. quality PATO:0001024 power PATO:0001024 A physical quality inhering in a bearer by virtue of the bearer's rate of doing work. Wikipedia:http://en.wikipedia.org/wiki/Power A physical quality that inheres in a bearer by virtue of the bearer's amount of force per unit area it exerts. quality PATO:0001025 pressure PATO:0001025 A physical quality that inheres in a bearer by virtue of the bearer's amount of force per unit area it exerts. PATOC:GVG A physical quality which is equal to the energy transferred by a force to a moving object. W quality PATO:0001026 work PATO:0001026 A physical quality which is equal to the energy transferred by a force to a moving object. Wikipedia:http://en.wikipedia.org/wiki/Work quality PATO:0001027 obsolete physical quantity true PATO:0001027 A physical quality inhering in a bearer by virtue of the rate of change of the bearer's velocity in either speed or direction. quality PATO:0001028 acceleration PATO:0001028 A physical quality inhering in a bearer by virtue of the rate of change of the bearer's velocity in either speed or direction. Wikipedia:http://en.wikipedia.org/wiki/Acceleration A physical quality inhering in a bearer by virtue of ratio of the bearer's output to the bearer's input. quality PATO:0001029 efficiency PATO:0001029 A physical quality inhering in a bearer by virtue of ratio of the bearer's output to the bearer's input. WordNet:WordNet A physical quality that exists by virtue of the rate of flow of the bearer across a given surface. quality PATO:0001030 flux PATO:0001030 A physical quality that exists by virtue of the rate of flow of the bearer across a given surface. WordNet:WordNet A physical quality inhering in a bearer by virtue of the bearer's disposition to recover its size and shape after deformation in any way. quality PATO:0001031 elasticity PATO:0001031 A physical quality inhering in a bearer by virtue of the bearer's disposition to recover its size and shape after deformation in any way. merriam-webster:merriam-webster PATO:0001032 true quality PATO:0001033 obsolete stiffness true PATO:0001033 A physical quality inhering in a bearer by virtue of the relative change in the bearer's length or the bearer's volume when being stretched or squashed. quality PATO:0001034 strain PATO:0001034 A physical quality inhering in a bearer by virtue of the relative change in the bearer's length or the bearer's volume when being stretched or squashed. PATOC:GVG A physical quality inhering in a bearer by virtue of the bearer's rate of change of momentum. force amplitude quality PATO:0001035 force PATO:0001035 A physical quality inhering in a bearer by virtue of the bearer's rate of change of momentum. thesaurus.maths:thesaurus.maths quality PATO:0001036 obsolete relative life span true PATO:0001036 quality PATO:0001037 obsolete absolute life span true PATO:0001037 quality PATO:0001038 obsolete ratio true PATO:0001038 quality PATO:0001039 obsolete absolute ratio true PATO:0001039 quality PATO:0001040 obsolete relative ratio true PATO:0001040 quality PATO:0001041 obsolete relative amplitude true PATO:0001041 quality PATO:0001042 obsolete absolute amplitude true PATO:0001042 A quality inhering in an entity by virtue of the bearer's propensity to resist an external stimulus. susceptibility quality PATO:0001043 susceptibility toward PATO:0001043 A quality inhering in an entity by virtue of the bearer's propensity to resist an external stimulus. PATOC:GVG quality PATO:0001044 obsolete absolute power true PATO:0001044 quality PATO:0001045 obsolete relative power true PATO:0001045 A quality inhering in a bearer by virtue of the bearer's disposition to resist to a stimulus. resistance quality PATO:0001046 resistance to PATO:0001046 A quality inhering in a bearer by virtue of the bearer's disposition to resist to a stimulus. PATOC:GVG quality PATO:0001047 obsolete absolute resistance true PATO:0001047 quality PATO:0001048 obsolete relative resistance true PATO:0001048 quality PATO:0001049 obsolete absolute susceptibility true PATO:0001049 quality PATO:0001050 obsolete relative susceptibility true PATO:0001050 An angle which is less than 90 degrees. quality PATO:0001051 acute angle to PATO:0001051 An angle which is less than 90 degrees. thesaurus.maths:thesaurus.maths An angle which is between 90 degrees and 180 degrees to another entity. quality PATO:0001052 obtuse angle to PATO:0001052 An angle which is between 90 degrees and 180 degrees to another entity. thesaurus.maths:thesaurus.maths An angle which is less than 180 degrees to another entity. quality PATO:0001053 convex angle to PATO:0001053 An angle which is less than 180 degrees to another entity. maths.org:maths.org A convex angle that is inside two adjacent sides of a polygon. quality PATO:0001054 internal angle PATO:0001054 A convex angle that is inside two adjacent sides of a polygon. PATOC:GVG An angular placement quality inhering in a bearer by virtue of the bearer's placement at an angle that is greater than 180 degrees but less than 360 degrees to another entity. quality PATO:0001055 reflex angle to PATO:0001055 An angular placement quality inhering in a bearer by virtue of the bearer's placement at an angle that is greater than 180 degrees but less than 360 degrees to another entity. thesaurus.maths:thesaurus.maths quality PATO:0001056 obsolete number true PATO:0001056 quality PATO:0001057 obsolete relative acceleration true PATO:0001057 quality PATO:0001058 obsolete absolute acceleration true PATO:0001058 quality PATO:0001059 obsolete relative efficiency true PATO:0001059 quality PATO:0001060 obsolete absolute efficiency true PATO:0001060 quality PATO:0001061 obsolete relative elasticity true PATO:0001061 quality PATO:0001062 obsolete absolute elasticity true PATO:0001062 quality PATO:0001063 obsolete relative flux true PATO:0001063 quality PATO:0001064 obsolete absolute flux true PATO:0001064 quality PATO:0001065 obsolete relative stiffness true PATO:0001065 quality PATO:0001066 obsolete absolute stiffness true PATO:0001066 quality PATO:0001067 obsolete absolute strain true PATO:0001067 quality PATO:0001068 obsolete relative strain true PATO:0001068 quality PATO:0001069 obsolete relative density true PATO:0001069 quality PATO:0001070 obsolete absolute density true PATO:0001070 quality PATO:0001071 obsolete relative energy true PATO:0001071 quality PATO:0001072 obsolete absolute energy true PATO:0001072 quality PATO:0001073 obsolete relative impulse true PATO:0001073 quality PATO:0001074 obsolete absolute impulse true PATO:0001074 quality PATO:0001075 obsolete absolute momentum true PATO:0001075 quality PATO:0001076 obsolete relative momentum true PATO:0001076 quality PATO:0001077 obsolete absolute pressure true PATO:0001077 quality PATO:0001078 obsolete relative pressure true PATO:0001078 quality PATO:0001079 obsolete absolute work true PATO:0001079 quality PATO:0001080 obsolete relative work true PATO:0001080 quality PATO:0001081 obsolete physical measure value true PATO:0001081 quality PATO:0001082 obsolete damage value true PATO:0001082 quality PATO:0001083 obsolete acceleration value true PATO:0001083 quality PATO:0001084 obsolete relative acceleration value true PATO:0001084 quality PATO:0001085 obsolete absolute acceleration value true PATO:0001085 quality PATO:0001086 obsolete efficiency value true PATO:0001086 quality PATO:0001087 obsolete relative efficiency value true PATO:0001087 quality PATO:0001088 obsolete absolute efficiency value true PATO:0001088 quality PATO:0001089 obsolete elasticity value true PATO:0001089 quality PATO:0001090 obsolete absolute elasticity value true PATO:0001090 quality PATO:0001091 obsolete relative elasticity value true PATO:0001091 quality PATO:0001092 obsolete flux value true PATO:0001092 quality PATO:0001093 obsolete relative flux value true PATO:0001093 quality PATO:0001094 obsolete absolute flux value true PATO:0001094 quality PATO:0001095 obsolete force value true PATO:0001095 quality PATO:0001096 obsolete absolute force value true PATO:0001096 quality PATO:0001097 obsolete relative force value true PATO:0001097 quality PATO:0001098 obsolete absolute force true PATO:0001098 quality PATO:0001099 obsolete relative force true PATO:0001099 quality PATO:0001100 obsolete position value true PATO:0001100 quality PATO:0001101 obsolete stiffness value true PATO:0001101 quality PATO:0001102 obsolete absolute stiffness value true PATO:0001102 quality PATO:0001103 obsolete relative stiffness value true PATO:0001103 quality PATO:0001104 obsolete strain value true PATO:0001104 quality PATO:0001105 obsolete absolute strain value true PATO:0001105 quality PATO:0001106 obsolete relative strain value true PATO:0001106 quality PATO:0001107 obsolete density value true PATO:0001107 quality PATO:0001108 obsolete relative amplitude value true PATO:0001108 quality PATO:0001109 obsolete absolute amplitude value true PATO:0001109 quality PATO:0001110 obsolete absolute density value true PATO:0001110 quality PATO:0001111 obsolete relative density value true PATO:0001111 quality PATO:0001112 obsolete energy value true PATO:0001112 quality PATO:0001113 obsolete absolute energy value true PATO:0001113 quality PATO:0001114 obsolete relative energy value true PATO:0001114 quality PATO:0001115 obsolete impulse value true PATO:0001115 quality PATO:0001116 obsolete relative impulse value true PATO:0001116 quality PATO:0001117 obsolete absolute impulse value true PATO:0001117 quality PATO:0001118 obsolete momentum value true PATO:0001118 quality PATO:0001119 obsolete absolute momentum value true PATO:0001119 quality PATO:0001120 obsolete relative momentum value true PATO:0001120 quality PATO:0001121 obsolete power value true PATO:0001121 quality PATO:0001122 obsolete absolute power value true PATO:0001122 quality PATO:0001123 obsolete relative power value true PATO:0001123 quality PATO:0001124 obsolete pressure value true PATO:0001124 quality PATO:0001125 obsolete absolute pressure value true PATO:0001125 quality PATO:0001126 obsolete relative pressure value true PATO:0001126 quality PATO:0001127 obsolete work value true PATO:0001127 quality PATO:0001128 obsolete absolute work value true PATO:0001128 quality PATO:0001129 obsolete relative work value true PATO:0001129 quality PATO:0001130 obsolete ratio value true PATO:0001130 quality PATO:0001131 obsolete absolute ratio value true PATO:0001131 quality PATO:0001132 obsolete relative ratio value true PATO:0001132 quality PATO:0001133 obsolete immunoglobulin concentration true PATO:0001133 quality PATO:0001134 obsolete ig a concentration true PATO:0001134 quality PATO:0001135 obsolete ig d concentration true PATO:0001135 quality PATO:0001136 obsolete ig e concentration true PATO:0001136 quality PATO:0001137 obsolete ig g concentration true PATO:0001137 quality PATO:0001138 obsolete ig m concentration true PATO:0001138 quality PATO:0001139 obsolete urine glucose composition true PATO:0001139 quality PATO:0001140 obsolete immunoglobulin concentration value true PATO:0001140 quality PATO:0001141 obsolete ig a concentration value true PATO:0001141 quality PATO:0001142 obsolete ig d concentration value true PATO:0001142 quality PATO:0001143 obsolete ig e concentration value true PATO:0001143 quality PATO:0001144 obsolete ig g concentration value true PATO:0001144 quality PATO:0001145 obsolete ig m concentration value true PATO:0001145 quality PATO:0001146 obsolete resistance value true PATO:0001146 quality PATO:0001147 obsolete absolute resistance value true PATO:0001147 quality PATO:0001148 obsolete relative resistance value true PATO:0001148 quality PATO:0001149 obsolete susceptibility value true PATO:0001149 quality PATO:0001150 obsolete absolute susceptibility value true PATO:0001150 quality PATO:0001151 obsolete relative susceptibility value true PATO:0001151 A quality inhering in a bearer by virtue of the bearer's having susceptibilty toward an external stimulus. susceptible quality PATO:0001152 susceptible toward PATO:0001152 A quality inhering in a bearer by virtue of the bearer's having susceptibilty toward an external stimulus. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's lacking susceptibilty toward an external stimulus. insusceptible quality PATO:0001153 insusceptible toward PATO:0001153 A quality inhering in a bearer by virtue of the bearer's lacking susceptibilty toward an external stimulus. PATO:GVG A quality inhering in a bearer by virtue of the bearer's length being notably higher than its width. quality PATO:0001154 elongated PATO:0001154 A quality inhering in a bearer by virtue of the bearer's length being notably higher than its width. WordNet:WordNet quality PATO:0001155 obsolete absolute concentration true PATO:0001155 quality PATO:0001156 obsolete relative concentration true PATO:0001156 quality PATO:0001157 obsolete absolute concentration value true PATO:0001157 quality PATO:0001158 obsolete relative concentration value true PATO:0001158 A concentration quality inhering in a bearer by virtue of the bearer's exhibiting concentration. quality PATO:0001159 concentrated PATO:0001159 A concentration quality inhering in a bearer by virtue of the bearer's exhibiting concentration. PATOC:GVG quality PATO:0001160 obsolete unconcentrated true PATO:0001160 A concentration which relatively low. quality PATO:0001161 diluted PATO:0001161 A concentration which relatively low. PATOC:GVG A concentration which is higher relative to the normal or average. high concentration quality PATO:0001162 increased concentration PATO:0001162 A concentration which is higher relative to the normal or average. PATOC:GVG A concentration which is lower relative to the normal or average. low concentration quality PATO:0001163 decreased concentration PATO:0001163 A concentration which is lower relative to the normal or average. PATOC:GVG A physical quality which inheres in a bearer by virtue of the bearer's exhibiting density. quality PATO:0001164 dense PATO:0001164 A physical quality which inheres in a bearer by virtue of the bearer's exhibiting density. PATOC:GVG quality PATO:0001165 obsolete urine enzyme composition value true PATO:0001165 quality PATO:0001166 obsolete urine enzyme composition true PATO:0001166 A structural quality inhering in a bearer by virtue of the bearer being harmed or injured or spoiled, such that its functionality is impaired. quality PATO:0001167 damaged PATO:0001167 A structural quality inhering in a bearer by virtue of the bearer being harmed or injured or spoiled, such that its functionality is impaired. WordNet:WordNet A structural quality inhering in a bearer by virtue of not being harmed or injured or spoiled. quality PATO:0001168 undamaged PATO:0001168 A structural quality inhering in a bearer by virtue of not being harmed or injured or spoiled. WordNet:WordNet PATO:0001169 true quality PATO:0001170 obsolete numerical value true PATO:0001170 An elasticity quality inhering in a bearer by virtue of the bearer's ability to recover its size and shape after deformation in any way. quality PATO:0001171 elastic PATO:0001171 An elasticity quality inhering in a bearer by virtue of the bearer's ability to recover its size and shape after deformation in any way. merriam-webster:merriam-webster An elasticity quality inhering in a bearer by virtue of the bearer's inability to recover its size and shape after deformation in any way. quality PATO:0001172 inelastic PATO:0001172 An elasticity quality inhering in a bearer by virtue of the bearer's inability to recover its size and shape after deformation in any way. merriam-webster:merriam-webster quality PATO:0001173 obsolete urine glucose composition value true PATO:0001173 quality PATO:0001174 obsolete urine composition true PATO:0001174 quality PATO:0001175 obsolete urine composition true PATO:0001175 quality PATO:0001176 obsolete deaf true PATO:0001176 quality PATO:0001177 obsolete blind true PATO:0001177 A resistance quality inhering in a bearer by virtue of the bearer's resistance to a stimulus. resistant quality PATO:0001178 resistant to PATO:0001178 A resistance quality inhering in a bearer by virtue of the bearer's resistance to a stimulus. PATOC:GVG quality PATO:0001179 obsolete immune true PATO:0001179 quality PATO:0001180 obsolete relative response true PATO:0001180 quality PATO:0001181 obsolete absolute response true PATO:0001181 quality PATO:0001182 obsolete relative response true PATO:0001182 quality PATO:0001183 obsolete absolute response value true PATO:0001183 quality PATO:0001184 obsolete maturity value true PATO:0001184 A maturity quality inhering in a bearer by virtue of the bearer's indirect development, undergoing metamorphosis. quality PATO:0001185 larval PATO:0001185 A maturity quality inhering in a bearer by virtue of the bearer's indirect development, undergoing metamorphosis. Wikipedia:http://en.wikipedia.org/wiki/Larval A maturity quality inhering in a bearer by virtue of the bearer's being at the age immediately before puberty. quality PATO:0001186 prepubescent PATO:0001186 A maturity quality inhering in a bearer by virtue of the bearer's being at the age immediately before puberty. WordNet:WordNet A maturity quality inhering in a insect by virtue of the bearer's being in the chrysalis (cocoon) or post larval stage. quality PATO:0001187 pupal PATO:0001187 A maturity quality inhering in a insect by virtue of the bearer's being in the chrysalis (cocoon) or post larval stage. WordNet:WordNet A maturity quality inhering in a bearer by virtue of the bearer's being in an inactive stage in the development of some insects, between the larval and the pupal stages. quality PATO:0001188 prepupal PATO:0001188 A maturity quality inhering in a bearer by virtue of the bearer's being in an inactive stage in the development of some insects, between the larval and the pupal stages. WordNet:WordNet A maturity quality inhering in a bearer by virtue of the bearer's being between the onset of puberty and maturity. quality PATO:0001189 adolescent PATO:0001189 A maturity quality inhering in a bearer by virtue of the bearer's being between the onset of puberty and maturity. WordNet:WordNet A maturity quality inhering in a bearer by virtue the bearer's being not fully grown or developed. quality PATO:0001190 juvenile PATO:0001190 A maturity quality inhering in a bearer by virtue the bearer's being not fully grown or developed. thefreedictionary.com:thefreedictionary.com A spatial quality inhering in a bearer by virtue of the bearer's being located toward the middle relative to another entity. quality PATO:0001191 medial to PATO:0001191 A spatial quality inhering in a bearer by virtue of the bearer's being located toward the middle relative to another entity. PATOC:nw A response quality inhering in a bearer by virtue of the bearer's excessive reaction to a stimulus or an agent. hyperresponsive increased responsivity quality PATO:0001192 hyperresponsive to PATO:0001192 A response quality inhering in a bearer by virtue of the bearer's excessive reaction to a stimulus or an agent. PATOC:GVG A spatial quality inhering in a bearer by virtue of the bearer's being located toward the side relative to another entity. lateral quality PATO:0001193 lateral to PATO:0001193 A spatial quality inhering in a bearer by virtue of the bearer's being located toward the side relative to another entity. PATOC:GVG A response quality inhering in a bearer by virtue of the bearer's limited reaction to a stimulus or an agent. decreased responsivity hyporesponsive quality PATO:0001194 hyporesponsive to PATO:0001194 A response quality inhering in a bearer by virtue of the bearer's limited reaction to a stimulus or an agent. PATOC:GVG A spatial quality inhering in a bearer by virtue of the bearer's being located more centrally than another entity. quality PATO:0001195 proximal to PATO:0001195 A spatial quality inhering in a bearer by virtue of the bearer's being located more centrally than another entity. PATOC:nw A spatial quality inhering in a bearer by virtue of the bearer's being located toward the abdomen of an organism relative to another entity. quality PATO:0001196 ventral to PATO:0001196 A spatial quality inhering in a bearer by virtue of the bearer's being located toward the abdomen of an organism relative to another entity. PATOC:nw quality PATO:0001197 obsolete modified direction true PATO:0001197 quality PATO:0001198 obsolete unmodified direction true PATO:0001198 A shape quality inhering in a bearer by virtue of the bearer's being narrow, with the two opposite margins parallel. quality PATO:0001199 linear PATO:0001199 A shape quality inhering in a bearer by virtue of the bearer's being narrow, with the two opposite margins parallel. ISBN:0881923214 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter T. quality PATO:0001200 T-shaped PATO:0001200 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter T. WordNet:WordNet A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter Y. quality PATO:0001201 Y-shaped PATO:0001201 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter Y. WordNet:WordNet PATO:0001202 true PATO:0001203 true quality PATO:0001204 obsolete not enlarged true PATO:0001204 A surface feature shape quality inhering in a bearer by virtue of the bearer's having toothlike projections in the margin. dentate toothed quality PATO:0001205 dentated PATO:0001205 A surface feature shape quality inhering in a bearer by virtue of the bearer's having toothlike projections in the margin. WordNet:WordNet A shape quality inhering in a bearer by virtue of having sharp straight-edged teeth pointing to the apex. serrate quality PATO:0001206 serrated PATO:0001206 A shape quality inhering in a bearer by virtue of having sharp straight-edged teeth pointing to the apex. ISBN:0881923214 quality PATO:0001207 obsolete absolute compatability true PATO:0001207 An odor quality inhering in a bearer by virtue of the bearer's lacking odour. quality PATO:0001208 odorless PATO:0001208 An odor quality inhering in a bearer by virtue of the bearer's lacking odour. PATOC:GVG quality PATO:0001209 obsolete absolute function true PATO:0001209 quality PATO:0001210 obsolete plane_angle_quantity true PATO:0001210 quality PATO:0001211 obsolete solid_angle_quantity true PATO:0001211 quality PATO:0001212 obsolete length_unit true PATO:0001212 quality PATO:0001213 obsolete mass_unit true PATO:0001213 quality PATO:0001214 obsolete temparature_unit true PATO:0001214 quality PATO:0001215 obsolete time_unit true PATO:0001215 quality PATO:0001216 obsolete volume_unit true PATO:0001216 quality PATO:0001217 obsolete energy_unit true PATO:0001217 quality PATO:0001218 obsolete substance_unit true PATO:0001218 quality PATO:0001219 obsolete area_unit true PATO:0001219 quality PATO:0001220 obsolete angle_unit true PATO:0001220 quality PATO:0001221 obsolete plane_angle_unit true PATO:0001221 quality PATO:0001222 obsolete solid_angle_unit true PATO:0001222 quality PATO:0001223 obsolete quantitative value true PATO:0001223 quality PATO:0001224 obsolete real number true PATO:0001224 quality PATO:0001225 obsolete relational number true PATO:0001225 PATO:0001226 true A variability quality inhering in a bearer by virtue of whether the bearer exhibits variation or change. variable quality PATO:0001227 variant PATO:0001227 A variability quality inhering in a bearer by virtue of whether the bearer exhibits variation or change. Dictionary:http://dictionary.reference.com/ quality PATO:0001228 obsolete dull true PATO:0001228 A color saturation which is of high purity. bright quality vivid PATO:0001229 high saturation PATO:0001229 A color saturation which is of high purity. PATOC:MAH A quality inhering in a bearer by virtue of the bearer's power or force. quality PATO:0001230 strength PATO:0001230 A quality inhering in a bearer by virtue of the bearer's power or force. thefreedictionary.com:thefreedictionary.com quality PATO:0001231 obsolete cold insensitive true PATO:0001231 quality PATO:0001232 obsolete heat insentive true PATO:0001232 A spatial quality inhering in a bearer by virtue of the bearer's being located toward the back or upper surface of an organism relative to another entity. dorsal posterior_to (human torso) superior_to (human head) quality PATO:0001233 dorsal to PATO:0001233 A spatial quality inhering in a bearer by virtue of the bearer's being located toward the back or upper surface of an organism relative to another entity. PATOC:nw A spatial quality inhering in a bearer by virtue of the bearer's being located further from a more centrally located entity. distal quality PATO:0001234 distal to PATO:0001234 A spatial quality inhering in a bearer by virtue of the bearer's being located further from a more centrally located entity. PATOC:nw quality PATO:0001235 obsolete strength value true PATO:0001235 A quality which inheres in an process. PATO:0001239 PATO:0001240 quality of a process quality of occurrent quality of process relational quality of occurrent quality PATO:0001236 See comments of relational quality of a physical entity. process quality PATO:0001236 A quality which inheres in an process. PATOC:GVG PATO:0001237 true PATO:0001238 true PATO:0001239 true PATO:0001240 true A quality which inheres in a continuant. PATO:0001237 PATO:0001238 snap:Quality monadic quality of a continuant multiply inhering quality of a physical entity quality of a continuant quality of a single physical entity quality of an object quality of continuant monadic quality of an object monadic quality of continuant quality PATO:0001241 Relational qualities are qualities that hold between multiple entities. Normal (monadic) qualities such as the shape of a eyeball exist purely as a quality of that eyeball. A relational quality such as sensitivity to light is a quality of that eyeball (and connecting nervous system) as it relates to incoming light waves/particles. physical object quality PATO:0001241 A quality which inheres in a continuant. PATOC:GVG A physical quality which is equal to the distance between repeating units of a wave pattern. quality PATO:0001242 wavelength PATO:0001242 A physical quality which is equal to the distance between repeating units of a wave pattern. PATOC:GVG A color consisting of blue hue and high brightness. quality PATO:0001243 light blue PATO:0001243 A color consisting of blue hue and high brightness. PATOC:GVG A color consisting of blue hue and low brightness. quality PATO:0001244 dark blue PATO:0001244 A color consisting of blue hue and low brightness. PATOC:GVG A color consisting of brown hue and low brightness. quality PATO:0001245 dark brown PATO:0001245 A color consisting of brown hue and low brightness. PATOC:GVG A color consisting of brown hue and high brightness. quality PATO:0001246 light brown PATO:0001246 A color consisting of brown hue and high brightness. PATOC:GVG A color consisting of cyan hue and high brightness. quality PATO:0001247 light cyan PATO:0001247 A color consisting of cyan hue and high brightness. PATOC:GVG A color consisting of cyan hue and low brightness. quality PATO:0001248 dark cyan PATO:0001248 A color consisting of cyan hue and low brightness. PATOC:GVG A color consisting of green hue and low brightness. quality PATO:0001249 dark green PATO:0001249 A color consisting of green hue and low brightness. PATOC:GVG A color consisting of green hue and high brightness. quality PATO:0001250 light green PATO:0001250 A color consisting of green hue and high brightness. PATOC:GVG A color consisting of grey color and low brightness. quality PATO:0001251 dark grey PATO:0001251 A color consisting of grey color and low brightness. PATOC:GVG A color consisting of grey color and high brightness. quality PATO:0001252 light grey PATO:0001252 A color consisting of grey color and high brightness. PATOC:GVG A color consisting of magenta color and high brightness. quality PATO:0001253 light magenta PATO:0001253 A color consisting of magenta color and high brightness. PATOC:GVG A color consisting of magenta with low brightness. quality PATO:0001254 dark magenta PATO:0001254 A color consisting of magenta with low brightness. PATOC:GVG A color consisting of orange hue and high brightness. quality PATO:0001255 light orange PATO:0001255 A color consisting of orange hue and high brightness. PATOC:GVG A color consisting of orange color and low brightness. quality PATO:0001256 dark orange PATO:0001256 A color consisting of orange color and low brightness. PATOC:GVG Pink color having high brightness and moderate saturation. quality PATO:0001257 light deep pink PATO:0001257 Pink color having high brightness and moderate saturation. PATOC:GVG Pink color having medium brightness and moderate saturation. quality PATO:0001258 deep pink PATO:0001258 Pink color having medium brightness and moderate saturation. PATOC:MAH A color consisting of purple color and low brightness. quality PATO:0001259 dark purple PATO:0001259 A color consisting of purple color and low brightness. PATOC:GVG A color consisting of purple color and high brightness. quality PATO:0001260 light purple PATO:0001260 A color consisting of purple color and high brightness. PATOC:GVG A color consisting of red hue and low brightness. quality PATO:0001261 dark red PATO:0001261 A color consisting of red hue and low brightness. PATOC:GVG A color consisting of red hue and high brightness. quality PATO:0001262 light red PATO:0001262 A color consisting of red hue and high brightness. PATOC:GVG A color consisting of yellow hue and low brightness. quality PATO:0001263 dark yellow PATO:0001263 A color consisting of yellow hue and low brightness. PATOC:GVG A color consisting of yellow hue and high brightness. quality blond PATO:0001264 light yellow PATO:0001264 A color consisting of yellow hue and high brightness. PATOC:GVG A color consisting of blue hue and high saturation. quality bright blue PATO:0001265 saturated blue PATO:0001265 A color consisting of blue hue and high saturation. PATOC:GVG A color consisting of blue hue and low saturation. pale blue quality PATO:0001266 desaturated blue PATO:0001266 A color consisting of blue hue and low saturation. PATOC:GVG A color consisting of brown hue and high saturation. quality bright brown PATO:0001267 saturated brown PATO:0001267 A color consisting of brown hue and high saturation. PATOC:GVG A color consisting of brown hue and low saturation. pale brown quality PATO:0001268 desaturated brown PATO:0001268 A color consisting of brown hue and low saturation. PATOC:GVG A color consisting of cyan colour and high saturation. quality bright cyan PATO:0001269 saturated cyan PATO:0001269 A color consisting of cyan colour and high saturation. PATOC:GVG A color consisting of cyan colour and low saturation. pale cyan quality PATO:0001270 desaturated cyan PATO:0001270 A color consisting of cyan colour and low saturation. PATOC:GVG A color consisting of green hue and high saturation. quality bright green PATO:0001271 saturated green PATO:0001271 A color consisting of green hue and high saturation. PATOC:GVG A color consisting of green hue and low saturation. pale green quality PATO:0001272 desaturated green PATO:0001272 A color consisting of green hue and low saturation. PATOC:GVG A color consisting of grey color and high saturation. quality PATO:0001273 obsolete bright grey true PATO:0001273 A color consisting of grey color and high saturation. PATOC:GVG A color consisting of grey color and low saturation. quality PATO:0001274 obsolete pale grey true PATO:0001274 A color consisting of grey color and low saturation. PATOC:GVG A color consisting of magenta color and high saturation. quality bright magenta PATO:0001275 saturated magenta PATO:0001275 A color consisting of magenta color and high saturation. PATOC:GVG A color consisting of magenta color and low saturation. pale magenta quality PATO:0001276 desaturated magenta PATO:0001276 A color consisting of magenta color and low saturation. PATOC:GVG A color consisting of orange hue and high saturation. quality bright orange PATO:0001277 saturated orange PATO:0001277 A color consisting of orange hue and high saturation. PATOC:GVG A color consisting of orange hue and low saturation. pale orange quality PATO:0001278 desaturated orange PATO:0001278 A color consisting of orange hue and low saturation. PATOC:GVG PATO:0001279 true Pink color having medium brightness and low saturation. PATO:0001279 quality bright pink PATO:0001280 dark pale pink PATO:0001280 Pink color having medium brightness and low saturation. PATOC:GVG A color consisting of purple color and high saturation. quality bright purple PATO:0001281 saturated purple PATO:0001281 A color consisting of purple color and high saturation. PATOC:GVG A color consisting of purple color and low saturation. pale purple quality PATO:0001282 desaturated purple PATO:0001282 A color consisting of purple color and low saturation. PATOC:GVG A color consisting of red hue and high saturation. quality bright red PATO:0001283 saturated red PATO:0001283 A color consisting of red hue and high saturation. PATOC:GVG A color consisting of red hue and low saturation. pale red quality PATO:0001284 desaturated red PATO:0001284 A color consisting of red hue and low saturation. PATOC:GVG A color consisting of yellow hue and high saturation. quality bright yellow PATO:0001285 saturated yellow PATO:0001285 A color consisting of yellow hue and high saturation. PATOC:GVG A color consisting of yellow hue and low saturation. pale yellow quality PATO:0001286 desaturated yellow PATO:0001286 A color consisting of yellow hue and low saturation. PATOC:GVG A color consisting of red and brown hue. quality PATO:0001287 red brown PATO:0001287 A color consisting of red and brown hue. PATOC:GVG A color consisting of red and brown hue and low brightness. quality PATO:0001288 dark red brown PATO:0001288 A color consisting of red and brown hue and low brightness. PATOC:GVG A color consisting of red and brown hue and high brightness. quality PATO:0001289 light red brown PATO:0001289 A color consisting of red and brown hue and high brightness. PATOC:GVG A fluorescence quality inhering in a bearer by virtue of emitting light during exposure to radiation from an external source. quality PATO:0001290 fluorescent PATO:0001290 A fluorescence quality inhering in a bearer by virtue of emitting light during exposure to radiation from an external source. web:www.thefreedictionary.com/ OBSOLETE A radiation quality that inheres in a bearer by virtue of how that bearer interacts with electromagnetic radiation. quality PATO:0001291 See https://github.com/pato-ontology/pato/issues/490 obsolete electromagnetic (EM) radiation quality true PATO:0001291 OBSOLETE A radiation quality that inheres in a bearer by virtue of how that bearer interacts with electromagnetic radiation. Wikipedia:http://en.wikipedia.org/wiki/Electromagnetic_radiation An EM radiation quality that is independent of the EM wavelength range. quality PATO:0001292 full-spectrum EM radiation quality PATO:0001292 An EM radiation quality that is independent of the EM wavelength range. PATOC:GVG A scalar EM radiation quality which obtains by the capacity of the bearer to retain radiation. quality PATO:0001293 absorption quality PATO:0001293 A scalar EM radiation quality which obtains by the capacity of the bearer to retain radiation. PATOC:GVG A scalar EM radiation quality which obtains by the capacity of the bearer to scatter or reflect radiation. quality PATO:0001294 radiation reflective quality PATO:0001294 A scalar EM radiation quality which obtains by the capacity of the bearer to scatter or reflect radiation. PATOC:GVG A reflective quality restricted to a particular wavelength. quality PATO:0001295 Typically used for light, but also applied to full EM spectrum. albedo PATO:0001295 A reflective quality restricted to a particular wavelength. PATOC:cjm A scalar optical quality which obtains by the magnitude of the light emitted by the bearer. quality PATO:0001296 luminous flux PATO:0001296 A scalar optical quality which obtains by the magnitude of the light emitted by the bearer. PATOC:GVG A radiation reflective quality inhering in a bearer by virtue of the ratio of the energy of a wave reflected from its surface to the energy possessed by the wave striking the bearer's surface. quality PATO:0001297 reflectivity PATO:0001297 A radiation reflective quality inhering in a bearer by virtue of the ratio of the energy of a wave reflected from its surface to the energy possessed by the wave striking the bearer's surface. PATOC:GVG A fluorescence in which the emittence continues after the absorption has ceased. quality PATO:0001298 phosphorescence PATO:0001298 A fluorescence in which the emittence continues after the absorption has ceased. PATOC:GVG A scalar EM radiation quality which obtains by the capacity of the bearer to emit radiation. quality PATO:0001299 radiation emitting quality PATO:0001299 A scalar EM radiation quality which obtains by the capacity of the bearer to emit radiation. PATOC:GVG An EM radiation quality in which the EM radiation is within the fiat range of the spectrum visible deemed to be light. quality PATO:0001300 optical quality PATO:0001300 An EM radiation quality in which the EM radiation is within the fiat range of the spectrum visible deemed to be light. PATOC:GVG An optical quality that is the mixture, purity or pattern of wavelengths of light perceived by the observer. quality PATO:0001301 chromatic property PATO:0001301 An optical quality that is the mixture, purity or pattern of wavelengths of light perceived by the observer. PATOC:MAH A color consisting of red and orange hue with a slight amount of gray. quality PATO:0001302 vermilion PATO:0001302 A color consisting of red and orange hue with a slight amount of gray. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's disposition to varying or changing. quality variability of a physical quality PATO:0001303 variability PATO:0001303 A quality inhering in a bearer by virtue of the bearer's disposition to varying or changing. Dictionary:http://dictionary.reference.com/ A variability quality inhering in a bearer by virtue of whether the bearer exhibits temperature variation or change. quality PATO:0001304 variability of temperature PATO:0001304 A variability quality inhering in a bearer by virtue of whether the bearer exhibits temperature variation or change. PATO:GVG A temperature which is relatively high. PATO:0000678 high temperature hot quality PATO:0001305 increased temperature PATO:0001305 A temperature which is relatively high. PATOC:GVG A temperature which is relatively low. PATO:0000677 cold low temperature quality PATO:0001306 decreased temperature PATO:0001306 A temperature which is relatively low. PATOC:GVG A variability of temperature which is relatively low. low variability of temperature quality PATO:0001307 decreased variability of temperature PATO:0001307 A variability of temperature which is relatively low. PATOC:GVG A variability of temperature which is relatively high. high variability of temperature quality PATO:0001308 increased variability of temperature PATO:0001308 A variability of temperature which is relatively high. PATOC:GVG A process quality inhering in a bearer by virtue of the bearer's magnitude of the temporal extent between the starting and ending point. PATO:0000081 period quality time PATO:0001309 duration PATO:0001309 A process quality inhering in a bearer by virtue of the bearer's magnitude of the temporal extent between the starting and ending point. PATOC:mellybelly A duration quality of a process inhering in a bearer by virtue of the bearer's duration of exhibition of thermal energy. quality PATO:0001310 TODO: obsolete? I don't know what this means. duration of temperature PATO:0001310 A duration quality of a process inhering in a bearer by virtue of the bearer's duration of exhibition of thermal energy. PATOC:GVG A duration of temperature which is lesser relative to the normal or average enduring or continuing in time. quality PATO:0001311 decreased duration of temperature PATO:0001311 A duration of temperature which is lesser relative to the normal or average enduring or continuing in time. PATOC:GVG A duration of temperature which is greater relative to the normal or average in respect to the quality of temperature of enduring or continuing in time. high duration of temperature quality PATO:0001312 increased duration of temperature PATO:0001312 A duration of temperature which is greater relative to the normal or average in respect to the quality of temperature of enduring or continuing in time. PATOC:GVG A variability quality inhering in a bearer by virtue of the bearer's lacking or not exhibiting variation of temperature. quality PATO:0001313 invariant temperature PATO:0001313 A variability quality inhering in a bearer by virtue of the bearer's lacking or not exhibiting variation of temperature. PATO:GVG A variability quality inhering in a bearer by virtue of the bearer's having or exhibiting variation of temperature. quality PATO:0001314 variant temperature PATO:0001314 A variability quality inhering in a bearer by virtue of the bearer's having or exhibiting variation of temperature. PATO:GVG A temperature which is increased by a low degree. quality PATO:0001315 mild increased temperature PATO:0001315 A temperature which is increased by a low degree. PATOC:GVG A temperature which is increased by a medium degree. quality PATO:0001316 moderate increased temperature PATO:0001316 A temperature which is increased by a medium degree. PATOC:GVG A temperature which is increased by a high degree. quality PATO:0001317 severe increased temperature PATO:0001317 A temperature which is increased by a high degree. PATOC:GVG A discrimination quality in a bearer by virtue of the bearer's being incapable perceiving differences between two or more stimuli. quality PATO:0001318 indiscriminate PATO:0001318 A discrimination quality in a bearer by virtue of the bearer's being incapable perceiving differences between two or more stimuli. PATOC:GVG A discrimination quality in a bearer by virtue of the bearer's being capable of perceiving differences between two or more stimuli. quality PATO:0001319 discriminate PATO:0001319 A discrimination quality in a bearer by virtue of the bearer's being capable of perceiving differences between two or more stimuli. PATOC:GVG A pilosity quality of being covered with short hairs or soft down. quality PATO:0001320 pubescent hair PATO:0001320 A pilosity quality of being covered with short hairs or soft down. PATOC:GVG An angle which is 90 degrees to another entity. quality PATO:0001321 right angle to PATO:0001321 An angle which is 90 degrees to another entity. thesaurus.math:thesaurus.math An angle which is 180 degrees to another entity. quality PATO:0001322 TODO: decide on correct parentage. straight angle to PATO:0001322 An angle which is 180 degrees to another entity. thesaurus.maths:thesaurus.maths A 2-D extent quality inhering in a bearer by virtue of the bearer's two dimensional extent. quality PATO:0001323 area PATO:0001323 A 2-D extent quality inhering in a bearer by virtue of the bearer's two dimensional extent. Wikipedia:http://en.wikipedia.org/wiki/Area A symmetry quality inhering in a bearer by virtue of the bearer's being symmetric about a plane running from its frontal end to its caudal end (head to tail), and has nearly identical right and left halves. left-right symmetry quality pennate PATO:0001324 bilateral symmetry PATO:0001324 A symmetry quality inhering in a bearer by virtue of the bearer's being symmetric about a plane running from its frontal end to its caudal end (head to tail), and has nearly identical right and left halves. Wikipedia:http://en.wikipedia.org/wiki/Bilateral_symmetry pennate https://orcid.org/0000-0001-5208-3432 https://orcid.org/0000-0002-2908-3327 A symmetry quality inhering in a bearer by virtue of the bearer's having equal proportion around a central point or axis. centric quality PATO:0001325 radial symmetry PATO:0001325 A symmetry quality inhering in a bearer by virtue of the bearer's having equal proportion around a central point or axis. PATOC:GVG centric https://orcid.org/0000-0001-5208-3432 https://orcid.org/0000-0002-2908-3327 quality PATO:0001326 obsolete left-right symmetry true PATO:0001326 A symmetry quality inhering in a bearer by virtue of the bearer's being capable of division into symmetrical halves by only one longitudinal plane passing through the axis. quality PATO:0001327 zygomorphic PATO:0001327 A symmetry quality inhering in a bearer by virtue of the bearer's being capable of division into symmetrical halves by only one longitudinal plane passing through the axis. WordNet:WordNet A symmetry quality inhering in a bearer by virtue of the bearer's being capable of division into symmetrical halves by any longitudinal plane passing through the axis. quality PATO:0001328 actinomorphic PATO:0001328 A symmetry quality inhering in a bearer by virtue of the bearer's being capable of division into symmetrical halves by any longitudinal plane passing through the axis. WordNet:WordNet A flavor quality inhering in a bearer by virtue of the bearer's having flavour. quality PATO:0001329 flavourful PATO:0001329 A flavor quality inhering in a bearer by virtue of the bearer's having flavour. PATOC:GVG A flavor quality inhering in a bearer by virtue of the bearer's lacking flavour. quality PATO:0001330 flavourless PATO:0001330 A flavor quality inhering in a bearer by virtue of the bearer's lacking flavour. PATOC:GVG An odor quality inhering in a bearer by virtue of the bearer's having odour. quality PATO:0001331 odorous PATO:0001331 An odor quality inhering in a bearer by virtue of the bearer's having odour. PATOC:GVG A morphology quality inhering in a bearer by virtue of the bearer's lack of distinct morphology. quality PATO:0001332 amorphous PATO:0001332 A morphology quality inhering in a bearer by virtue of the bearer's lack of distinct morphology. PATOC:GVG A quality of a process which ends later than the natural end time. quality PATO:0001333 temporally extended PATO:0001333 A quality of a process which ends later than the natural end time. PATOC:melissa A length quality which is equal to the length of any straight line segment that passes through the center of a circle and whose endpoints are on the circular boundary. quality PATO:0001334 diameter PATO:0001334 A length quality which is equal to the length of any straight line segment that passes through the center of a circle and whose endpoints are on the circular boundary. Wikipedia:http://en.wikipedia.org/wiki/Diameter A mating type that indicates whether the F plasmid has integrated into the chromosome. quality PATO:0001335 bacterial mating type PATO:0001335 A mating type that indicates whether the F plasmid has integrated into the chromosome. MGED:MGED A biological sex quality inhering in an individual whose sex is unknown. quality PATO:0001336 Unknown is not a type of sex. obsolete unknown sex true PATO:0001336 A biological sex quality inhering in an individual whose sex is unknown. MGED:MGED A yeast mating type. quality PATO:0001337 yeast mating type PATO:0001337 A yeast mating type. PATOC:GVG A biological sex quality inhering in a population of multiple sexes. quality PATO:0001338 For example a mixture of females and male or males and hermaphrodites. mixed sex PATO:0001338 A biological sex quality inhering in a population of multiple sexes. MGED:MGED A composition quality inhering in an bearer by virtue of the bearer's homogeneity of a biomaterial. quality PATO:0001339 biomaterial purity PATO:0001339 A composition quality inhering in an bearer by virtue of the bearer's homogeneity of a biomaterial. MGED:MGED A biological sex quality inhering in an organism or a population with both male and female sexual organs in one individual. hermaphroditic intersex quality PATO:0001340 hermaphrodite PATO:0001340 A biological sex quality inhering in an organism or a population with both male and female sexual organs in one individual. MGED:MGED A S. cerevisiae mating type cells that secrete a pheromone that in alpha haploids stimulates processes that lead to mating. a quality PATO:0001341 a mating type (yeast) PATO:0001341 A S. cerevisiae mating type cells that secrete a pheromone that in alpha haploids stimulates processes that lead to mating. MGED:MGED A S. cerevisiae mating type. quality PATO:0001342 Saccharomyces cerevisiae mating type PATO:0001342 A S. cerevisiae mating type. PATOC:GVG A S. pombe mating type determined by the gene configuration on the mat1 locus. quality PATO:0001343 Schizosaccharomyces pombe mating type PATO:0001343 A S. pombe mating type determined by the gene configuration on the mat1 locus. PATOC:GVG A S. cerevisiae mating type cells that secrete a pheromone that stimulates a haploids. alpha quality PATO:0001344 alpha mating type (yeast) PATO:0001344 A S. cerevisiae mating type cells that secrete a pheromone that stimulates a haploids. MGED:MGED A S. pombe mating type determined by the mat1-Mc and mat1-Mi on the mat1 locus. M h - quality PATO:0001345 h minus PATO:0001345 A S. pombe mating type determined by the mat1-Mc and mat1-Mi on the mat1 locus. PATOC:GVG A S. pombe mating type determined by the mat1-Pc and mat1-Pi on the mat1 locus. P h+ quality PATO:0001346 h plus PATO:0001346 A S. pombe mating type determined by the mat1-Pc and mat1-Pi on the mat1 locus. PATOC:GVG A bacterial mating type indicating the presence of F plasmid in a bacterial cell. quality PATO:0001347 F mating type PATO:0001347 A bacterial mating type indicating the presence of F plasmid in a bacterial cell. MGED:MGED A bacterial mating type indicating the absence of F plasmid in a bacterial cell. F- quality PATO:0001348 F minus mating type PATO:0001348 A bacterial mating type indicating the absence of F plasmid in a bacterial cell. MGED:MGED A mating type that indicates that the F plasmid has integrated into the chromosome. Hfr quality PATO:0001349 high frequency recombinant PATO:0001349 A mating type that indicates that the F plasmid has integrated into the chromosome. MGED:MGED A physical quality inhering in a bearer by virtue of the rate of change of the bearer's angular velocity. quality PATO:0001350 angular acceleration PATO:0001350 A physical quality inhering in a bearer by virtue of the rate of change of the bearer's angular velocity. Wikipedia:http://en.wikipedia.org/wiki/Angular_acceleration A density quality which inheres in a bearer by virtue of some influence exerted by the bearer's mass on a given area. quality PATO:0001351 area density PATO:0001351 A density quality which inheres in a bearer by virtue of some influence exerted by the bearer's mass on a given area. Wikipedia:http://en.wikipedia.org/wiki/Area_density A density quality which is equal to the mass exerting an influence on a one-dimensional object. quality PATO:0001352 linear density PATO:0001352 A density quality which is equal to the mass exerting an influence on a one-dimensional object. Wikipedia:http://en.wikipedia.org/wiki/Linear_density A density quality which inheres in a bearer by virtue of some influence exerted by the bearer's mass on a given volume. quality PATO:0001353 volumetric density PATO:0001353 A density quality which inheres in a bearer by virtue of some influence exerted by the bearer's mass on a given volume. Wikipedia:http://en.wikipedia.org/wiki/Mass_density A optical quality inhering in a bearer by virtue of the bearer's exhibiting low opacity. quality PATO:0001354 translucent PATO:0001354 A optical quality inhering in a bearer by virtue of the bearer's exhibiting low opacity. PATOC:GVG A shape quality that obtains by virtue of the bearer having inward facing edges; having a surface or boundary that curves or bulges outward, as the exterior of a sphere. quality PATO:0001355 convex PATO:0001355 A shape quality that obtains by virtue of the bearer having inward facing edges; having a surface or boundary that curves or bulges outward, as the exterior of a sphere. PATOC:GVG A shape quality inhering in a cell by virtue of the bearer's ability to take on two or more different shapes during its life cycle. quality PATO:0001356 pleomorphic PATO:0001356 A shape quality inhering in a cell by virtue of the bearer's ability to take on two or more different shapes during its life cycle. PATOC:GVG A convex 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped like a cushion or has a marked convex cushion-like form. quality PATO:0001357 pulvinate PATO:0001357 A convex 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped like a cushion or has a marked convex cushion-like form. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's having a knob or knoblike protuberance. quality PATO:0001358 umbonate PATO:0001358 A quality inhering in a bearer by virtue of the bearer's having a knob or knoblike protuberance. PATOC:GVG A surface feature shape quality inhering in a bearer by virtue of the bearer's having many wrinkles or creases on the surface. quality PATO:0001359 rugose PATO:0001359 A surface feature shape quality inhering in a bearer by virtue of the bearer's having many wrinkles or creases on the surface. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's having thin filamentous extensions at its edge. quality PATO:0001360 filamentous PATO:0001360 A shape quality inhering in a bearer by virtue of the bearer's having thin filamentous extensions at its edge. PATOC:GVG A texture quality inhering in a bearer by virtue of the bearer's being covered with warts or projections that resemble warts resulting in a hard rough surface. quality PATO:0001361 warty PATO:0001361 A texture quality inhering in a bearer by virtue of the bearer's being covered with warts or projections that resemble warts resulting in a hard rough surface. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer's disposition to being easily damaged or destroyed. quality PATO:0001362 fragile PATO:0001362 A structural quality inhering in a bearer by virtue of the bearer's disposition to being easily damaged or destroyed. WordNet:WordNet PATO:0001363 true A quality inhering in a bearer by virtue of the bearer's having root like extensions radiating from its center. quality PATO:0001364 rhizoidal PATO:0001364 A quality inhering in a bearer by virtue of the bearer's having root like extensions radiating from its center. PATOC:GVG A surface feature shape quality inhering in a bearer by virtue of the bearer's having spines, thorns or similar thin projections on its surface. quality PATO:0001365 spiny PATO:0001365 A surface feature shape quality inhering in a bearer by virtue of the bearer's having spines, thorns or similar thin projections on its surface. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's being small and resembling a point. quality PATO:0001366 punctiform PATO:0001366 A shape quality inhering in a bearer by virtue of the bearer's being small and resembling a point. PATOC:GVG A surface feature shape quality inhering in a bearer by virtue of the bearer's having deeply undulating edges forming lobes. quality PATO:0001367 lobate PATO:0001367 A surface feature shape quality inhering in a bearer by virtue of the bearer's having deeply undulating edges forming lobes. PATOC:GVG A surface feature shape quality inhering in a bearer by virtue of the bearer's having an irregularly toothed edge. quality jagged PATO:0001368 erose PATO:0001368 A surface feature shape quality inhering in a bearer by virtue of the bearer's having an irregularly toothed edge. PATOC:GVG A shape quality inhering in a colony by virtue of the bearer's appearing above the medium surface with terraced edges. quality PATO:0001369 raised PATO:0001369 A shape quality inhering in a colony by virtue of the bearer's appearing above the medium surface with terraced edges. PATOC:GVG A coating quality which is sticky or clammy. quality PATO:0001370 viscid PATO:0001370 A coating quality which is sticky or clammy. PATOC:GVG A composition quality inhering in an bearer by virtue of the bearer's consistency of mucus. quality mucinous mucous PATO:0001371 mucoid PATO:0001371 A composition quality inhering in an bearer by virtue of the bearer's consistency of mucus. PATOC:GVG A physical quality that inheres in propagating wave (light or sound) virtue of the bearer's change in direction when passing from one medium to another. quality PATO:0001372 refractivity PATO:0001372 A physical quality that inheres in propagating wave (light or sound) virtue of the bearer's change in direction when passing from one medium to another. WordNet:WordNet A reflectivity quality inhering in a bearer by virtue of the bearer's reflecting lots of light. glossy shiny quality PATO:0001373 glistening PATO:0001373 A reflectivity quality inhering in a bearer by virtue of the bearer's reflecting lots of light. PATOC:GVG A cellular quality inhering in a bearer by virtue of the bearer's number of homologous sets of chromosomes in the nucleus or primary chromosome-containing compartment of the cell, each set essentially coding for all the biological traits of the organism. quality PATO:0001374 ploidy PATO:0001374 A cellular quality inhering in a bearer by virtue of the bearer's number of homologous sets of chromosomes in the nucleus or primary chromosome-containing compartment of the cell, each set essentially coding for all the biological traits of the organism. Wikipedia:http://en.wikipedia.org/wiki/Ploidy A ploidy quality inhering in a bearer by virtue of the bearer's containing a single set of homologous chromosomes. quality PATO:0001375 haploid PATO:0001375 A ploidy quality inhering in a bearer by virtue of the bearer's containing a single set of homologous chromosomes. Wikipedia:http://en.wikipedia.org/wiki/Haploid A ploidy quality inhering in a bearer by virtue of the bearer's containing a single set of unique homologous chromosomes. quality PATO:0001376 monoploid PATO:0001376 A ploidy quality inhering in a bearer by virtue of the bearer's containing a single set of unique homologous chromosomes. Wikipedia:http://en.wikipedia.org/wiki/Monoploid A ploidy quality inhering in a bearer by virtue of the bearer's containing more than two homologous sets of chromosomes. quality PATO:0001377 polyploid PATO:0001377 A ploidy quality inhering in a bearer by virtue of the bearer's containing more than two homologous sets of chromosomes. Wikipedia:http://en.wikipedia.org/wiki/Polyploid A polyploidy quality inhering in a bearer by virtue of the bearer's containing chromosomes derived from a single species. quality PATO:0001378 autopolyploid PATO:0001378 A polyploidy quality inhering in a bearer by virtue of the bearer's containing chromosomes derived from a single species. Wikipedia:http://en.wikipedia.org/wiki/Autopolyploid A polyploidy quality inhering in a bearer by virtue of the bearer's containing chromosomes derived from different species. quality PATO:0001379 allopolyploidy PATO:0001379 A polyploidy quality inhering in a bearer by virtue of the bearer's containing chromosomes derived from different species. Wikipedia:http://en.wikipedia.org/wiki/Allopolyploidy A polyploidy quality inhering in a bearer by virtue of the bearer's having an ancient polyploid ancestor. quality PATO:0001380 paleopolyploid PATO:0001380 A polyploidy quality inhering in a bearer by virtue of the bearer's having an ancient polyploid ancestor. Wikipedia:http://en.wikipedia.org/wiki/Paleopolyploid A polyploidy quality inhering in a bearer by virtue of the bearer's containing three homologous sets of chromosomes. quality PATO:0001381 triploid PATO:0001381 A polyploidy quality inhering in a bearer by virtue of the bearer's containing three homologous sets of chromosomes. Wikipedia:http://en.wikipedia.org/wiki/Triploid A polyploidy quality inhering in a bearer by virtue of the bearer's containing four homologous sets of chromosomes. quality PATO:0001382 tetraploid PATO:0001382 A polyploidy quality inhering in a bearer by virtue of the bearer's containing four homologous sets of chromosomes. Wikipedia:http://en.wikipedia.org/wiki/Tetraploid A polyploidy quality inhering in a bearer by virtue of the bearer's containing five homologous sets of chromosomes. quality PATO:0001383 pentaploid PATO:0001383 A polyploidy quality inhering in a bearer by virtue of the bearer's containing five homologous sets of chromosomes. Wikipedia:http://en.wikipedia.org/wiki/Pentaploid A polyploidy quality inhering in a bearer by virtue of the bearer's containing six homologous sets of chromosomes. quality PATO:0001384 hexaploid PATO:0001384 A polyploidy quality inhering in a bearer by virtue of the bearer's containing six homologous sets of chromosomes. Wikipedia:http://en.wikipedia.org/wiki/Hexaploid A ploidy quality inhering in a bearer by virtue of the bearer's containing a non-integral multiple of the monoploid number, due to extra or missing chromosomes. quality PATO:0001385 aneuploid PATO:0001385 A ploidy quality inhering in a bearer by virtue of the bearer's containing a non-integral multiple of the monoploid number, due to extra or missing chromosomes. Wikipedia:http://en.wikipedia.org/wiki/Aneuploid An aneuploidy quality inhering in a bearer by virtue of the bearer's containing only one chromosome from a pair in a cell's nucleus. quality PATO:0001386 monosomy PATO:0001386 An aneuploidy quality inhering in a bearer by virtue of the bearer's containing only one chromosome from a pair in a cell's nucleus. Wikipedia:http://en.wikipedia.org/wiki/Monosomy An aneuploidy quality inhering in a bearer by virtue of the bearer's containing only two chromosome from a pair in a cell's nucleus. quality PATO:0001387 For diploid organisms, such as humans, it is the normal condition, whilst for organisms that are normally triploid or above, disomy is an aneuploidy. disomy PATO:0001387 An aneuploidy quality inhering in a bearer by virtue of the bearer's containing only two chromosome from a pair in a cell's nucleus. Wikipedia:http://en.wikipedia.org/wiki/Disomy A disomy quality inhering in a bearer by virtue of the bearer's containing two copies of the chromosome from one of the parents (with no contribution from the other parent). quality PATO:0001388 uniparental disomy PATO:0001388 A disomy quality inhering in a bearer by virtue of the bearer's containing two copies of the chromosome from one of the parents (with no contribution from the other parent). Wikipedia:http://en.wikipedia.org/wiki/Uniparental_disomy An aneuploidy quality inhering in a bearer by virtue of the bearer's containing three, instead of two, chromosomes of a particular numbered type in an organism. quality PATO:0001389 trisomy PATO:0001389 An aneuploidy quality inhering in a bearer by virtue of the bearer's containing three, instead of two, chromosomes of a particular numbered type in an organism. Wikipedia:http://en.wikipedia.org/wiki/Trisomy A trisomy quality inhering in a bearer when part of the bearer's extra chromosome is attached to one of the other chromosomes, or if one of the bearer's chromosomes has two copies of part of its chromosome. quality PATO:0001390 partial trisomy PATO:0001390 A trisomy quality inhering in a bearer when part of the bearer's extra chromosome is attached to one of the other chromosomes, or if one of the bearer's chromosomes has two copies of part of its chromosome. Wikipedia:http://en.wikipedia.org/wiki/Partial_trisomy A trisomy quality inhering in a bearer by virtue of the bearer's having extra chromosomal material in only some of it's cells. quality PATO:0001391 mosaic trisomy PATO:0001391 A trisomy quality inhering in a bearer by virtue of the bearer's having extra chromosomal material in only some of it's cells. PATOC:GVG A polyploidy quality inhering in a bearer by virtue of the bearer's chromosome number being increased by endomitosis and for which the degree of ploidy is proportional to the number of times that endomitosis has taken place. quality PATO:0001392 endopolyploid PATO:0001392 A polyploidy quality inhering in a bearer by virtue of the bearer's chromosome number being increased by endomitosis and for which the degree of ploidy is proportional to the number of times that endomitosis has taken place. Wikipedia:http://en.wikipedia.org/wiki/Endopolyploid A ploidy quality inhering in a bearer by virtue of the bearer's containing an integral multiple of the monoploid number, possibly excluding the sex-determining chromosomes. quality PATO:0001393 euploid PATO:0001393 A ploidy quality inhering in a bearer by virtue of the bearer's containing an integral multiple of the monoploid number, possibly excluding the sex-determining chromosomes. Wikipedia:http://en.wikipedia.org/wiki/Euploid A ploidy quality inhering in a bearer by virtue of the bearer's having two copies (homologs) of each chromosome, usually one from the mother and one from the father. quality PATO:0001394 The exact number may be one or two different from the 2n number and still be classified as diploidy (although with aneuploidy). Nearly all mammals are diploid organisms, although all individuals have some small fraction of cells that are polyploidy. diploid PATO:0001394 A ploidy quality inhering in a bearer by virtue of the bearer's having two copies (homologs) of each chromosome, usually one from the mother and one from the father. Wikipedia:http://en.wikipedia.org/wiki/Diploid A diploidy quality inhering in a bearer in by virtue of belonging in a species whose one of the sexes has haploid cells and the other has diploid cells. quality PATO:0001395 haplodiploid PATO:0001395 A diploidy quality inhering in a bearer in by virtue of belonging in a species whose one of the sexes has haploid cells and the other has diploid cells. Wikipedia:http://en.wikipedia.org/wiki/Haplodiploid A monadic quality of continuant that exists at the cellular level of organisation. quality PATO:0001396 cellular quality PATO:0001396 A monadic quality of continuant that exists at the cellular level of organisation. PATOC:GVG A cellular quality that arises by virtue of whether the bearer's disposition to differentiate into one or more mature cell types. quality PATO:0001397 cellular potency PATO:0001397 A cellular quality that arises by virtue of whether the bearer's disposition to differentiate into one or more mature cell types. PATOC:GVG A cellular quality inhering in a bearer by virtue of the bearer's having the ability to go through numerous cycles of cell division while maintaining the undifferentiated state. quality PATO:0001398 self-renewal PATO:0001398 A cellular quality inhering in a bearer by virtue of the bearer's having the ability to go through numerous cycles of cell division while maintaining the undifferentiated state. PATOC:GVG A cellular potency that is the capacity to produce differentiated cell types of all three primary germ layers and extraembryonic cell types. quality PATO:0001399 totipotent PATO:0001399 A cellular potency that is the capacity to produce differentiated cell types of all three primary germ layers and extraembryonic cell types. Wikipedia:http://en.wikipedia.org/wiki/Totipotent A cellular potency that is the capacity to produce only one differentiated cell type. quality PATO:0001400 Unipotent cells have the quality of self-renewal which distinguishes them from non-stem cells. unipotent PATO:0001400 A cellular potency that is the capacity to produce only one differentiated cell type. Wikipedia:http://en.wikipedia.org/wiki/Unipotent A cellular potency that is the capacity to form multiple differentiated cell types of a specific lineage and lack self renewing capacity. quality PATO:0001401 Less potent than multipotent, often thought of as precursor or progenitor cell status. oligopotent PATO:0001401 A cellular potency that is the capacity to form multiple differentiated cell types of a specific lineage and lack self renewing capacity. PATOC:MAH A cellular potency that is the capacity to form multiple differentiated cell types. quality PATO:0001402 multipotent PATO:0001402 A cellular potency that is the capacity to form multiple differentiated cell types. Wikipedia:http://en.wikipedia.org/wiki/Multipotent A cellular potency that is the capacity to produce differentiated cell types of all three primary germ layers but not extraembryonic cell types. quality PATO:0001403 pluripotent PATO:0001403 A cellular potency that is the capacity to produce differentiated cell types of all three primary germ layers but not extraembryonic cell types. Wikipedia:http://en.wikipedia.org/wiki/Pluripotent A cellular quality inhering in a bearer by virtue of bearer's number of nuclei. quality PATO:0001404 nucleate quality PATO:0001404 A cellular quality inhering in a bearer by virtue of bearer's number of nuclei. PATOC:GVG A nucleate quality inhering in a bearer by virtue of the bearer's having no nucleus. quality PATO:0001405 anucleate PATO:0001405 A nucleate quality inhering in a bearer by virtue of the bearer's having no nucleus. Biology-online:Biology-online A nucleate quality inhering in a bearer by virtue of the bearer's having two nuclei. quality PATO:0001406 binucleate PATO:0001406 A nucleate quality inhering in a bearer by virtue of the bearer's having two nuclei. Biology-online:Biology-online A nucleate quality inhering in a bearer by virtue of the bearer's having one nucleus. quality PATO:0001407 mononucleate PATO:0001407 A nucleate quality inhering in a bearer by virtue of the bearer's having one nucleus. Biology-online:Biology-online A cellular quality inhering in a bearer by virtue of the bearer's having one or more cilia as a part. quality PATO:0001408 ciliated PATO:0001408 A cellular quality inhering in a bearer by virtue of the bearer's having one or more cilia as a part. PMID:36924208 wikipedia:Cilium A shape quality inhering in a bearer by virtue of the bearer's resembling a long tapered rod. quality PATO:0001409 spindle-shaped PATO:0001409 A shape quality inhering in a bearer by virtue of the bearer's resembling a long tapered rod. Biology-online:Biology-online A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel. quality PATO:0001410 striated PATO:0001410 A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel. Biology-online:Biology-online A structural quality inhering in a bearer by virtue of the bearer's having distinct structure. quality PATO:0001411 structured PATO:0001411 A structural quality inhering in a bearer by virtue of the bearer's having distinct structure. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer's lacking distinct structure. quality PATO:0001412 unstructured PATO:0001412 A structural quality inhering in a bearer by virtue of the bearer's lacking distinct structure. PATOC:GVG A physical quality inhering in a bearer by virtue of the rate of the bearer's angular movement about an axis; the angle rotated in a given time. quality PATO:0001413 angular velocity PATO:0001413 A physical quality inhering in a bearer by virtue of the rate of the bearer's angular movement about an axis; the angle rotated in a given time. Wikipedia:http://en.wikipedia.org/wiki/Angular_velocity A physical quality inhering in a catalyst by virtue of the amount of the catalyst's action. quality PATO:0001414 catalytic activity PATO:0001414 A physical quality inhering in a catalyst by virtue of the amount of the catalyst's action. PATOC:GVG A quality inhering in a population by virtue of the proportion of its members that are ill at a given time. quality PATO:0001415 morbidity PATO:0001415 A quality inhering in a population by virtue of the proportion of its members that are ill at a given time. PATOC:GVG A duration which has regular start and/or end times. quality PATO:0001416 regular duration PATO:0001416 A duration which has regular start and/or end times. PATOC:GVG A duration quality of a process inhering in a bearer by virtue of the bearer's duration which has irregular start and/or end times. quality PATO:0001417 irregular duration PATO:0001417 A duration quality of a process inhering in a bearer by virtue of the bearer's duration which has irregular start and/or end times. PATOC:melissa A behavioral quality inhering in a bearer by virtue of the bearer's being deficient in alertness or activity. quality PATO:0001418 lethargic PATO:0001418 A behavioral quality inhering in a bearer by virtue of the bearer's being deficient in alertness or activity. WordNet:WordNet A shape quality inhering in a bearer by virtue of the bearer's terminating in a point or edge. quality PATO:0001419 sharp PATO:0001419 A shape quality inhering in a bearer by virtue of the bearer's terminating in a point or edge. PATOC:GVG A physical quality inhering in a bearer by virtue of the bearer's disposition to rise or float in a fluid medium such as water or air. quality PATO:0001420 buoyancy PATO:0001420 A physical quality inhering in a bearer by virtue of the bearer's disposition to rise or float in a fluid medium such as water or air. PATOC:GVG A viability quality inhering in a bearer by virtue of the bearer's condition before death. quality PATO:0001421 alive PATO:0001421 A viability quality inhering in a bearer by virtue of the bearer's condition before death. PATOC:GVG A viability quality inhering in a bearer by virtue of the cessation of the bearer's life. quality PATO:0001422 dead PATO:0001422 A viability quality inhering in a bearer by virtue of the cessation of the bearer's life. PATOC:GVG A reflectivity quality inhering in the bearer by virtue of the bearer's ability to refract light. quality PATO:0001423 refractile PATO:0001423 A reflectivity quality inhering in the bearer by virtue of the bearer's ability to refract light. biology-online:biology-online A color hue with very low wavelength of that portion of the visible spectrum lying between reddish blue or bluish purple, evoked in the human observer by radiant energy with wavelengths of approximately 420 to 380 nanometers. quality PATO:0001424 violet PATO:0001424 A color hue with very low wavelength of that portion of the visible spectrum lying between reddish blue or bluish purple, evoked in the human observer by radiant energy with wavelengths of approximately 420 to 380 nanometers. Wikipedia:http://en.wikipedia.org/wiki/Violet A color hue consisting of red hue and yellow hue and high brightness. quality PATO:0001425 rosy PATO:0001425 A color hue consisting of red hue and yellow hue and high brightness. PATOC:GVG A color consisting of purple and brown hue. quality PATO:0001426 maroon PATO:0001426 A color consisting of purple and brown hue. Wikipedia:http://en.wikipedia.org/wiki/Maroon A concentration quality inhering in compound by virtue of the bearer's tendency to act as a hydron donor. quality PATO:0001427 compound acidity PATO:0001427 A concentration quality inhering in compound by virtue of the bearer's tendency to act as a hydron donor. chemicool:chemicool A concentration quality inhering in a medium by virtue of the bearer's tendency to hydronate a specific reference base. quality PATO:0001428 medium acidity PATO:0001428 A concentration quality inhering in a medium by virtue of the bearer's tendency to hydronate a specific reference base. chemicool:chemicool An medium acidity quality inhering in a solution by virtue of the bearer's a high concentration of H+ ions. quality PATO:0001429 acidic PATO:0001429 An medium acidity quality inhering in a solution by virtue of the bearer's a high concentration of H+ ions. chemicool:chemicool An medium acidity quality inhering in a solution by virtue of the bearer's a low concentration of H+ ions. quality PATO:0001430 alkaline PATO:0001430 An medium acidity quality inhering in a solution by virtue of the bearer's a low concentration of H+ ions. chemicool:chemicool An emergent molecular quality that arises by virtue of the bearer's disposition to exhibit molecular attraction to another entity in contact. adhesiveness quality stickiness PATO:0001431 The definition is general enough to cover adhesion arising from different kinds of chemical bonding/forces, although for PATO this term will most commonly used for cellular adhesion. See also GO:0031589 "cell-substrate adhesion". adhesivity PATO:0001431 An emergent molecular quality that arises by virtue of the bearer's disposition to exhibit molecular attraction to another entity in contact. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's decomposition into component parts. quality PATO:0001432 decayed PATO:0001432 A quality inhering in a bearer by virtue of the bearer's decomposition into component parts. Medical-dictionary:Medical-dictionary A quality of a single process which describes the growth of an organism, structure, or group of organisms. PATO:0001489 quality growth quality of a process growth timing quality PATO:0001433 growth quality of occurrent PATO:0001433 A quality of a single process which describes the growth of an organism, structure, or group of organisms. PATOC:MAH An organismal quality inhering in a bearer by virtue of the bearer's ability to produce new life or offspring. quality PATO:0001434 reproductive quality PATO:0001434 An organismal quality inhering in a bearer by virtue of the bearer's ability to produce new life or offspring. WordNet:WordNet A structural quality inhering in a bearer by virtue of the bearer's having connection or association with another entity. quality PATO:0001435 attachment quality PATO:0001435 A structural quality inhering in a bearer by virtue of the bearer's having connection or association with another entity. PATOC:GVG An attachment quality inhering in a flower by virtue of the bearer's lacking a stalk, as in flowers or leaves that grow directly from the stem. quality PATO:0001436 sessile (sensu botany) PATO:0001436 An attachment quality inhering in a flower by virtue of the bearer's lacking a stalk, as in flowers or leaves that grow directly from the stem. Wikipedia:http://en.wikipedia.org/wiki/Sessility_(botany) A attachment quality inhering in a bearer by virtue of the bearer's inability to move about. quality PATO:0001437 sessile (sensu zoology) PATO:0001437 A attachment quality inhering in a bearer by virtue of the bearer's inability to move about. Wikipedia:http://en.wikipedia.org/wiki/Sessile_(zoology) A attachment quality inhering in a bearer by virtue of the bearer's having or being supported by a pedicel or pedicle. quality PATO:0001438 pedicellate PATO:0001438 A attachment quality inhering in a bearer by virtue of the bearer's having or being supported by a pedicel or pedicle. MedTerms:MedTerms A contractile quality inhering in a bearer by virtue of the bearer's elastic tension that facilitate response to stimuli. PATO:0001498 tone quality PATO:0001439 TODO: we need a clearer differentium between this and contractility - or merge? tonicity PATO:0001439 A contractile quality inhering in a bearer by virtue of the bearer's elastic tension that facilitate response to stimuli. WordNet:WordNet A cellular adhesivity quality inhering in a molecule in one cell by virtue of the bearer's attachment to an identical molecule in an adjacent cell. quality PATO:0001440 homophilic PATO:0001440 A cellular adhesivity quality inhering in a molecule in one cell by virtue of the bearer's attachment to an identical molecule in an adjacent cell. GO:GO A cellular adhesivity quality inhering in a molecule in one cell by virtue of the bearer's attachment to an nonidentical molecule in an adjacent cell. quality PATO:0001441 heterophilic PATO:0001441 A cellular adhesivity quality inhering in a molecule in one cell by virtue of the bearer's attachment to an nonidentical molecule in an adjacent cell. GO:GO A structural quality inhering in a bearer by virtue of whether the bearer includes all its components. quality PATO:0001442 wholeness PATO:0001442 A structural quality inhering in a bearer by virtue of whether the bearer includes all its components. thefreedictionary.com:thefreedictionary.com PATO:0001443 true A structural quality inhering in a bearer by virtue of the bearer's components no longer being in a single contiguous unit. PATO:0001443 PATO:0001820 fragmented fractured quality cracked hemorrhaged split torn PATO:0001444 broken PATO:0001444 A structural quality inhering in a bearer by virtue of the bearer's components no longer being in a single contiguous unit. https://orcid.org/0000-0003-4606-0597 A wholeness quality inhering in a bearer by virtue of the bearer's being taken apart into its constituent parts. quality PATO:0001445 disassembled PATO:0001445 A wholeness quality inhering in a bearer by virtue of the bearer's being taken apart into its constituent parts. thefreedictionary.com:thefreedictionary.com A wholeness quality inhering in a bearer by virtue of the bearer's including all its components. quality PATO:0001446 whole PATO:0001446 A wholeness quality inhering in a bearer by virtue of the bearer's including all its components. thefreedictionary.com:thefreedictionary.com A composition quality inhering in an bearer by virtue of the bearer's being encrusted or impregnated with calcium carbonate (CHEBI:3311). calcareous calcification quality PATO:0001447 calcified PATO:0001447 A composition quality inhering in an bearer by virtue of the bearer's being encrusted or impregnated with calcium carbonate (CHEBI:3311). thefreedictionary.com:thefreedictionary.com A composition quality inhering in an bearer by virtue of the bearer's being hardened by the deposition of calcium into bone. quality PATO:0001448 ossified PATO:0001448 A composition quality inhering in an bearer by virtue of the bearer's being hardened by the deposition of calcium into bone. MAMMALOGY:MAMMALOGY A composition quality inhering in an bearer by virtue of the bearer's cartilage quantities. quality PATO:0001449 Cartilage is a type of dense connective tissue. It is composed of specialized cells called chondrocytes (CL:0000138) that produce a large amount of extracellular matrix composed of collagen fibers, abundant ground substance rich in proteoglycan, and elastin fibers. cartilaginous PATO:0001449 A composition quality inhering in an bearer by virtue of the bearer's cartilage quantities. Wikipedia:http://en.wikipedia.org/wiki/Cartilaginous A structural quality which is held by a bearer when the latter exhibits an excessive accumulation of extracellular fluid. edemic oedematous oedemic edema oedema quality PATO:0001450 edematous PATO:0001450 A structural quality which is held by a bearer when the latter exhibits an excessive accumulation of extracellular fluid. thefreedictionary.com:thefreedictionary.com An extended swelling in plant organs caused primarily by an excessive accumulation of water. quality edemic oedematous oedemic PATO:0001451 obsolete edematous (sensu botany) true PATO:0001451 An extended swelling in plant organs caused primarily by an excessive accumulation of water. thefreedictionary.com:thefreedictionary.com PATO:0001452 true An attachment quality inhering in a bearer by virtue of the bearer's lacking connection or association with another entity. detached quality PATO:0001453 detached from PATO:0001453 An attachment quality inhering in a bearer by virtue of the bearer's lacking connection or association with another entity. PATOC:GVG A sensitivity quality inhering in a bearer by virtue of the bearer's dependence on oxygen. quality PATO:0001454 sensitivity to oxygen PATO:0001454 A sensitivity quality inhering in a bearer by virtue of the bearer's dependence on oxygen. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's dependence on oxygen. quality PATO:0001455 aerobic PATO:0001455 A quality inhering in a bearer by virtue of the bearer's dependence on oxygen. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's independence on oxygen. quality PATO:0001456 anaerobic PATO:0001456 A quality inhering in a bearer by virtue of the bearer's independence on oxygen. PATOC:GVG A quality of a process inhering in bearer by virtue of the bearer's disposition to respond to stimulation. sensitivity of occurrent quality PATO:0001457 sensitivity of a process PATO:0001457 A quality of a process inhering in bearer by virtue of the bearer's disposition to respond to stimulation. PATOC:GVG A sensitivity of a process quality inhering in a bearer by virtue of the bearer's unfolding in a location with or without oxygen. sensitivity of occurrent to oxygen quality PATO:0001458 sensitivity of a process to oxygen PATO:0001458 A sensitivity of a process quality inhering in a bearer by virtue of the bearer's unfolding in a location with or without oxygen. PATOC:GVG A sensitivity of a process inhering in a biological process by virtue of the process unfolding in a location with oxygen. quality PATO:0001459 aerobic (for occurrence) PATO:0001459 A sensitivity of a process inhering in a biological process by virtue of the process unfolding in a location with oxygen. PATOC:GVG A sensitivity of a process inhering in a biological process by virtue of the process unfolding in a location without oxygen. quality PATO:0001460 anaerobic (for occurrence) PATO:0001460 A sensitivity of a process inhering in a biological process by virtue of the process unfolding in a location without oxygen. PATOC:GVG A physical quality inhering in a liquid by virtue of the bearer's ability to attraction of molecules at its surface as a result of unbalanced molecular cohesive forces. quality PATO:0001461 surface tension PATO:0001461 A physical quality inhering in a liquid by virtue of the bearer's ability to attraction of molecules at its surface as a result of unbalanced molecular cohesive forces. Wikipedia:http://en.wikipedia.org/wiki/Surface_tension A quality inhering in a cell's plasma membrane by virtue of the electrical potential difference across it. quality PATO:0001462 membrane potential PATO:0001462 A quality inhering in a cell's plasma membrane by virtue of the electrical potential difference across it. Wikipedia:http://en.wikipedia.org/wiki/Membrane_potential A quality inhering in a cell's plasma membrane by virtue of a brief fluctuation in the bearer's potential caused by the rapid opening and closing of voltage-gated ion channels. quality PATO:0001463 action potential PATO:0001463 A quality inhering in a cell's plasma membrane by virtue of a brief fluctuation in the bearer's potential caused by the rapid opening and closing of voltage-gated ion channels. Wikipedia:http://en.wikipedia.org/wiki/Action_potential A quality that is equal to the potential energy per unit charge associated with a static (time-invariant) electric field, also called the electrostatic potential. quality PATO:0001464 electric potential PATO:0001464 A quality that is equal to the potential energy per unit charge associated with a static (time-invariant) electric field, also called the electrostatic potential. Wikipedia:http://en.wikipedia.org/wiki/Electric_potential A malformed quality inhering in a bearer by virtue of the bearer's all-encompassing, grotesque morphological defects. quality PATO:0001465 monstrous PATO:0001465 A malformed quality inhering in a bearer by virtue of the bearer's all-encompassing, grotesque morphological defects. PATOC:GVG A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the front of an organism. curved anterior curved superior (human torso) quality PATO:0001466 curved rostral PATO:0001466 A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the front of an organism. PATOC:GVG A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the part of the body from which the tail arises. curved inferior (human torso) curved posterior quality PATO:0001467 curved caudal PATO:0001467 A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the part of the body from which the tail arises. PATOC:GVG A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the back or upper surface of an organism. curved posterior (human torso) curved superior (human head) quality PATO:0001468 curved dorsal PATO:0001468 A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the back or upper surface of an organism. PATOC:GVG A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the abdomen of an organism. curved anterior (human torso) curved inferior (human head) quality PATO:0001469 curved ventral PATO:0001469 A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the abdomen of an organism. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's magnitude in proportion to the magnitude of another entity. proportion proportionality proportionality to quotient quality rate PATO:0001470 Examples: height to weight; brain size to body size; root to shoot ratio; urinary sodium to potassium ratio. waist-hip ratio. ratio PATO:0001470 A quality inhering in a bearer by virtue of the bearer's magnitude in proportion to the magnitude of another entity. https://orcid.org/0000-0001-8314-2140 Examples: height to weight; brain size to body size; root to shoot ratio; urinary sodium to potassium ratio. waist-hip ratio. https://orcid.org/0000-0001-8314-2140 PATO:0001471 true A depth which is relatively low. PATO:0001692 low depth shallow quality PATO:0001472 decreased depth PATO:0001472 A depth which is relatively low. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's being present in two copies. doubled quality PATO:0001473 duplicated PATO:0001473 A quality inhering in a bearer by virtue of the bearer's being present in two copies. Dictionary.com:Dictionary.com An oriented quality inhering in a bearer by virtue of the bearer's axis being positioned forward. quality PATO:0001474 anteverted PATO:0001474 An oriented quality inhering in a bearer by virtue of the bearer's axis being positioned forward. bdid:bdid A position which is relatively high. quality high position PATO:0001475 increased position PATO:0001475 A position which is relatively high. PATOC:GVG A positional which is relatively low. quality low position PATO:0001476 decreased position PATO:0001476 A positional which is relatively low. PATOC:GVG A positional quality inhering in a bearer by virtue of the bearer's being drawn in or pulled back from any given point. moved quality retruded PATO:0001477 retracted PATO:0001477 A positional quality inhering in a bearer by virtue of the bearer's being drawn in or pulled back from any given point. Dictionary.com:Dictionary.com A structural quality inhering in a bearer by virtue of the bearer's being broken down; caved in. quality PATO:0001478 collapsed PATO:0001478 A structural quality inhering in a bearer by virtue of the bearer's being broken down; caved in. Dictionary.com:Dictionary.com PATO:0001479 true A structural quality inhering in a bearer by virtue of the bearer's resembling a sponge in elasticity, absorbency, or porousness. quality PATO:0001480 spongy PATO:0001480 A structural quality inhering in a bearer by virtue of the bearer's resembling a sponge in elasticity, absorbency, or porousness. Answers.com:Answers.com A shape quality inhering in a bearer by virtue of the bearer's having an oblique or slanted direction. quality PATO:0001481 sloped PATO:0001481 A shape quality inhering in a bearer by virtue of the bearer's having an oblique or slanted direction. WordNet:WordNet A quality inhering in a bearer by virtue of the bearer's standing out or projecting beyond a surface or line. quality PATO:0001482 prominent PATO:0001482 A quality inhering in a bearer by virtue of the bearer's standing out or projecting beyond a surface or line. Dictionary.com:Dictionary.com Absence of an organ, tissue or cell due to failure to develop from a primordium or precursor cell. aplasia undeveloped quality PATO:0001483 With aplasia, the primordium or precursor develops, but does not proceed in its development to a mature structure aplastic PATO:0001483 Absence of an organ, tissue or cell due to failure to develop from a primordium or precursor cell. PATOC:GVG PATOC:PortlandMeetingFeb2015 A quality of a process which occurs near to or not long before the present. quality PATO:0001484 recent PATO:0001484 A quality of a process which occurs near to or not long before the present. WordNet:WordNet A structural quality inhering in a bearer by virtue of the bearer's being thicker or more closely packed together; pressed tightly together. PATO:0001840 compact compressed squashed quality dense PATO:0001485 condensed PATO:0001485 A structural quality inhering in a bearer by virtue of the bearer's being thicker or more closely packed together; pressed tightly together. PATOC:GVG An age quality that exists by virtue of the time (years and months) that the bearer has existed. quality PATO:0001486 chronological age PATO:0001486 An age quality that exists by virtue of the time (years and months) that the bearer has existed. WordNet:Wordnet A time quality inhering in a bearer by virtue of the bearer's growing old; aging. quality PATO:0001487 senescent PATO:0001487 A time quality inhering in a bearer by virtue of the bearer's growing old; aging. answers.com:answers.com A cellular quality inhering in a cell by virtue of whether the bearer exhibits the ability to move spontaneously. quality PATO:0001488 Term should be obsoleted and the GO term cellular motility should be used instead. cellular motility PATO:0001488 A cellular quality inhering in a cell by virtue of whether the bearer exhibits the ability to move spontaneously. thefreedictionary.com:thefreedictionary.com PATO:0001489 true A growth quality of a process inhering in an organism, structure, or group of organisms by virtue of the bearer's reduced or increased growth. quality PATO:0001490 heterochronic growth PATO:0001490 A growth quality of a process inhering in an organism, structure, or group of organisms by virtue of the bearer's reduced or increased growth. PATOC:MAH A paedomorphic growth quality which is due to a reduced rate. neotenic growth quality PATO:0001491 neotenous growth PATO:0001491 A paedomorphic growth quality which is due to a reduced rate. PATOC:mh The rate or speed of the change in size of an individual entity or change in number of a population. quality PATO:0001492 growth rate PATO:0001492 The rate or speed of the change in size of an individual entity or change in number of a population. https://orcid.org/0000-0002-9900-7880 https://orcid.org/0000-0003-4606-0597 quality PATO:0001493 This term will be obsoleted; Use GO:growth and PATO:rate. hypertrophic growth PATO:0001493 quality PATO:0001494 This term will be obsoleted; Use GO:growth and PATO:rate. hypotrophic growth PATO:0001494 A concave quality inhering in a bearer by virtue of the bearer's shape being a V-shaped cut. quality indented PATO:0001495 notched PATO:0001495 A concave quality inhering in a bearer by virtue of the bearer's shape being a V-shaped cut. thefreedictionary.com:thefreedictionary.com A reproductive quality inhering in the young of an animal by virtue of the bearer's being cared for at one time. quality PATO:0001496 brood quality PATO:0001496 A reproductive quality inhering in the young of an animal by virtue of the bearer's being cared for at one time. WordNet:WordNet A reproductive quality inhering in the young of an animal by virtue of the bearer's disposition to survive and develop normally. quality PATO:0001497 brood viability PATO:0001497 A reproductive quality inhering in the young of an animal by virtue of the bearer's disposition to survive and develop normally. PATOC:GVG PATO:0001498 true A spheroid quality inhering in a bearer by virtue of the bearer's resembling a ball (a sphere whose equatorial diameter is equal to the polar diameter). PATO:0000408 globular quality rotund PATO:0001499 spherical PATO:0001499 A spheroid quality inhering in a bearer by virtue of the bearer's resembling a ball (a sphere whose equatorial diameter is equal to the polar diameter). WordNet:WordNet A shape quality inhering in a bearer by virtue of the bearer's being gradually narrower or thinner toward one end. taper quality PATO:0001500 tapered PATO:0001500 A shape quality inhering in a bearer by virtue of the bearer's being gradually narrower or thinner toward one end. WordNet:WordNet A quality inhering in a bearer by virtue of the bearer's lacking complete growth, differentiation, or development. quality underdeveloped PATO:0001501 immature PATO:0001501 A quality inhering in a bearer by virtue of the bearer's lacking complete growth, differentiation, or development. Merriam-Webster:Merriam-Webster A monadic quality of continuant inhering in a bearer by virtue of the bearer's being intricate and compounded. quality PATO:0001502 TODO: obsolete this. complexity PATO:0001502 A monadic quality of continuant inhering in a bearer by virtue of the bearer's being intricate and compounded. WordNet:WordNet A complexity quality in a bearer by virtue of the bearer's having few parts or being complicated or compound. quality PATO:0001503 simple PATO:0001503 A complexity quality in a bearer by virtue of the bearer's having few parts or being complicated or compound. WordNet:WordNet A complexity quality inhering in a bearer by virtue of the bearer's being intricate and compounded. quality PATO:0001504 complex PATO:0001504 A complexity quality inhering in a bearer by virtue of the bearer's being intricate and compounded. WordNet:WordNet A structural quality inhering in a bearer by virtue of the bearer's not being in contact with another entity, or of no longer being connected or joined with another entity. quality discontiguous divided_from splitted from PATO:0001505 separated from PATO:0001505 A structural quality inhering in a bearer by virtue of the bearer's not being in contact with another entity, or of no longer being connected or joined with another entity. WordNet:WordNet A structural quality inhering in a bearer by virtue of the bearer's separation of normally joined parts, such as the separation of adjacent bones without fracture or of certain abdominal muscles during pregnancy. quality PATO:0001506 diastatic PATO:0001506 A structural quality inhering in a bearer by virtue of the bearer's separation of normally joined parts, such as the separation of adjacent bones without fracture or of certain abdominal muscles during pregnancy. answers.com:answers.com A quality of a single process inhering in a bearer by virtue of the bearer's being interrupted of its normal course. quality PATO:0001507 disrupted PATO:0001507 A quality of a single process inhering in a bearer by virtue of the bearer's being interrupted of its normal course. PATOC:GVG PATO:0001508 true A quality of a single physical entity that arises by virtue of whether the bearer exhibits the ability to perform a regular function(s). quality PATO:0001509 functionality PATO:0001509 A quality of a single physical entity that arises by virtue of whether the bearer exhibits the ability to perform a regular function(s). PATOC:MAH A functionality quality held by the bearer when the latter is able to perform a regular function(s). quality PATO:0001510 functional PATO:0001510 A functionality quality held by the bearer when the latter is able to perform a regular function(s). PATOC:MAH A disfunctional quality held by the bearer when the latter is unable to perform a regular function(s). PATO:0001640 disfunctional functional failure quality defective failure PATO:0001511 non-functional PATO:0001511 A disfunctional quality held by the bearer when the latter is unable to perform a regular function(s). PATC:MAH A pattern inhering in a surface by virtue of the bearer's being marked by the presence of dots, punctures, points or pits. quality dotted spotted stippled PATO:0001512 punctate PATO:0001512 A pattern inhering in a surface by virtue of the bearer's being marked by the presence of dots, punctures, points or pits. medical-dictionary:medical-dictionary PATO:0001513 true A structural quality inhering in a bearer by virtue of the bearer's lacking some outer layer. quality PATO:0001514 delaminated PATO:0001514 A structural quality inhering in a bearer by virtue of the bearer's lacking some outer layer. PATOC:cjm A color quality inhering in a bearer by virtue of the bearer's being uneven in color. quality murky PATO:0001515 variable color PATO:0001515 A color quality inhering in a bearer by virtue of the bearer's being uneven in color. PATOC:NC An optical quality where light rays originating from a point on the object converge. quality PATO:0001516 focus PATO:0001516 An optical quality where light rays originating from a point on the object converge. Wikipedia:http://en.wikipedia.org/wiki/Focus_(optics) An optical quality inhering in a bearer by virtue of the bearer's having focus. quality PATO:0001517 focused PATO:0001517 An optical quality inhering in a bearer by virtue of the bearer's having focus. PATOC:GVG An optical quality inhering in a bearer by virtue of the bearer's lacking focus. quality PATO:0001518 blurry PATO:0001518 An optical quality inhering in a bearer by virtue of the bearer's lacking focus. PATOC:NC A quality inhering in a bearer by virtue of vibration, as perceived by the sense of hearing. quality PATO:0001519 sound quality PATO:0001519 A quality inhering in a bearer by virtue of vibration, as perceived by the sense of hearing. Wikipedia:http://en.wikipedia.org/wiki/Sound_quality The frequency of transmitted vibrations. quality PATO:0001520 sound frequency PATO:0001520 The frequency of transmitted vibrations. thefreedictionary.com:thefreedictionary.com A physical quality inhering in a sound wave by virtue of the maximum magnitude (value without regard to sign) of its disturbance. loudness quality PATO:0001521 sound amplitude PATO:0001521 A physical quality inhering in a sound wave by virtue of the maximum magnitude (value without regard to sign) of its disturbance. answers.com:answers.com A physical quality inhering in sound by virtue of the bearer's travelling speed in a given medium under specified conditions. quality PATO:0001522 sound speed PATO:0001522 A physical quality inhering in sound by virtue of the bearer's travelling speed in a given medium under specified conditions. Wikipedia:http://en.wikipedia.org/wiki/Sound_speed A physical quality which is equal to the quotient of the speed of a sound wave divided by its wavelength. quality PATO:0001523 sound wavelength PATO:0001523 A physical quality which is equal to the quotient of the speed of a sound wave divided by its wavelength. Wikipedia:http://en.wikipedia.org/wiki/Sound_wavelength A sound frequency in the range of 0-20 Hz. quality PATO:0001524 intrasonic PATO:0001524 A sound frequency in the range of 0-20 Hz. studyphysics:studyphysics A sound frequency in the range of 20 to 20.000 Hz. quality PATO:0001525 sonic PATO:0001525 A sound frequency in the range of 20 to 20.000 Hz. url:http://www.studyphysics.ca/ A sound frequency in the range of 20 000 + Hz. quality PATO:0001526 ultrasonic PATO:0001526 A sound frequency in the range of 20 000 + Hz. studyphysics:studyphysics A sound amplitude which is relatively low. quality PATO:0001527 quiet PATO:0001527 A sound amplitude which is relatively low. PATOC:GVG A sound amplitude which is relatively high. quality PATO:0001528 loud PATO:0001528 A sound amplitude which is relatively high. PATOC:GVG A spatiotemporal quality inhering in a cell. quality PATO:0001529 cellular spatiotemporal quality PATO:0001529 A spatiotemporal quality inhering in a cell. PATOC:GVG A quality of a single process inhering in a bearer by virtue of the bearer's behavior. behavioral quality of occurrent quality PATO:0001530 behavioral quality of a process PATO:0001530 A quality of a single process inhering in a bearer by virtue of the bearer's behavior. PATOC:GVG A cellular quality that exists by virtue of the disposition of the cell to adhere to other cells and molecules, through the emergent action of the molecular parts of the cell surface. quality PATO:0001531 cellular adhesivity PATO:0001531 A cellular quality that exists by virtue of the disposition of the cell to adhere to other cells and molecules, through the emergent action of the molecular parts of the cell surface. PATOC:cjm A color pattern inhering in a bearer by virtue of the bearer's having one hue. evenly colored homogeneously colored uniformly colored quality homogenously pigmented PATO:0001532 mono-colored PATO:0001532 A color pattern inhering in a bearer by virtue of the bearer's having one hue. PATOC:GVG A color pattern inhering in a bearer by virtue of bearer's having two or more hues or degrees of saturation. variegated quality PATO:0001533 multi-colored PATO:0001533 A color pattern inhering in a bearer by virtue of bearer's having two or more hues or degrees of saturation. PATOC:GVG A color pattern inhering in a bearer by virtue of bearer's having 3 or more hues or degrees of saturations. quality PATO:0001534 motley PATO:0001534 A color pattern inhering in a bearer by virtue of bearer's having 3 or more hues or degrees of saturations. merriam-webster.:merriam-webster. A color pattern inhering in a bearer by virtue of bearer's being marked with small spots, patches, or specks of hue or degree of saturation differing from that of the background. quality speckled PATO:0001535 dappled PATO:0001535 A color pattern inhering in a bearer by virtue of bearer's being marked with small spots, patches, or specks of hue or degree of saturation differing from that of the background. merriam-webster.:merriam-webster. A molecular quality that inheres in a molecular entity by virtue of the bearer's disposition to dissolve in a liquid. quality PATO:0001536 solubility PATO:0001536 A molecular quality that inheres in a molecular entity by virtue of the bearer's disposition to dissolve in a liquid. edp:edp A solubility quality inhering in a substance by virtue of the bearer's disposition to dissolve in a liquid. soluble quality PATO:0001537 soluble in PATO:0001537 A solubility quality inhering in a substance by virtue of the bearer's disposition to dissolve in a liquid. edp:edp A solubility quality inhering in a substance by virtue of the bearer's inability of a substance to dissolve in a liquid. insoluble quality PATO:0001538 insoluble in PATO:0001538 A solubility quality inhering in a substance by virtue of the bearer's inability of a substance to dissolve in a liquid. edp:edp A compositional quality inhering in an bearer by virtue of the bearer's quantities or relative ratios of amylose of the inhering entity. amylose compositionality quality PATO:0001539 amylose composition PATO:0001539 A compositional quality inhering in an bearer by virtue of the bearer's quantities or relative ratios of amylose of the inhering entity. PATOC:GVG An amylose composition quality inhering in an bearer by virtue of the bearer's having negligible or no amylose content. quality PATO:0001540 glutinous PATO:0001540 An amylose composition quality inhering in an bearer by virtue of the bearer's having negligible or no amylose content. TO:TO An amylose composition quality inhering in an bearer by virtue of the bearer's having high amount of amylose content. quality PATO:0001541 non-glutinous PATO:0001541 An amylose composition quality inhering in an bearer by virtue of the bearer's having high amount of amylose content. TO:TO A phase which starts later than natural start point. quality PATO:0001542 delayed phase PATO:0001542 A phase which starts later than natural start point. PATOC:GVG A physical quality inhering in a bearer by virtue of the bearer's disposition to being turned, bowed, or twisted without breaking. quality PATO:0001543 flexibility PATO:0001543 A physical quality inhering in a bearer by virtue of the bearer's disposition to being turned, bowed, or twisted without breaking. merriam-webster:merriam-webster A physical quality inhering in a bearer by virtue of the bearer's ability of being turned, bowed, or twisted without breaking. bendy quality PATO:0001544 flexible PATO:0001544 A physical quality inhering in a bearer by virtue of the bearer's ability of being turned, bowed, or twisted without breaking. merriam-webster:merriam-webster A physical quality inhering in a bearer by virtue of the bearer's inability of being turned, bowed, or twisted without breaking. stiff quality stiffness PATO:0001545 inflexible PATO:0001545 A physical quality inhering in a bearer by virtue of the bearer's inability of being turned, bowed, or twisted without breaking. merriam-webster:merriam-webster A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity characterized by particles arranged such that their shape and volume are relatively stable. solidity quality PATO:0001546 quality of a solid PATO:0001546 A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity characterized by particles arranged such that their shape and volume are relatively stable. Chemistry:http://chemistry.about.com/od/chemistryglossary/a/soliddefinition.htm A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity consisting of particles that have neither a defined volume nor defined shape. gaseous quality PATO:0001547 quality of a gas PATO:0001547 A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity consisting of particles that have neither a defined volume nor defined shape. Chemistry:http://chemistry.about.com/od/chemistryglossary/a/gasdefinition.htm PATOC:GVG A physical quality inhering in an entity exhibiting the physical characteristics of an amorphous (non-crystalline) form of matter between a gas and a solid that has a definite volume, but no definite shape. liquidity quality PATO:0001548 quality of a liquid PATO:0001548 A physical quality inhering in an entity exhibiting the physical characteristics of an amorphous (non-crystalline) form of matter between a gas and a solid that has a definite volume, but no definite shape. url:http://www.chemistry-dictionary.com/definition/liquid.php A sensitivity toward an external stimulus which is higher than normal/average. high sensitivity toward increased sensitivity quality PATO:0001549 increased sensitivity toward PATO:0001549 A sensitivity toward an external stimulus which is higher than normal/average. PATO:GVG A sensitivity toward an external stimulus which is lower than normal/average. decreased sensitivity low sensitivity toward quality PATO:0001550 decreased sensitivity toward PATO:0001550 A sensitivity toward an external stimulus which is lower than normal/average. PATO:GVG A sensitivity of a process which is higher than normal or average. high sensitivity of occurrent increased sensitivity of occurrent quality PATO:0001551 increased sensitivity of a process PATO:0001551 A sensitivity of a process which is higher than normal or average. PATO:GVG A sensitivity of a process which is lower than normal or average. decreased sensitivity of occurrent low sensitivity of occurrent quality PATO:0001552 decreased sensitivity of a process PATO:0001552 A sensitivity of a process which is lower than normal or average. PATO:GVG A sensitivity of occurrent to oxygen which is higher than normal or average. high sensitivity of occurrent to oxygen quality PATO:0001553 increased sensitivity of a process to oxygen PATO:0001553 A sensitivity of occurrent to oxygen which is higher than normal or average. PATO:GVG A sensitivity of a process to oxygen which is lower than normal or average. low sensitivity of occurrent to oxygen quality PATO:0001554 decreased sensitivity of a process to oxygen PATO:0001554 A sensitivity of a process to oxygen which is lower than normal or average. PATO:GVG The number of parts of a particular type that the bearer entity has. This is a relational quality, and thus holds between two entities: the bearer of the quality, and the type of parts. OBO_REL:has_part extra or missing physical or functional parts has or lacks parts of type mereological quality number of quality cardinality number PATO:0001555 has number of PATO:0001555 The number of parts of a particular type that the bearer entity has. This is a relational quality, and thus holds between two entities: the bearer of the quality, and the type of parts. PATOC:CJM PATO:0001556 true PATO:0001557 true A quality of a process inhering in a bearer by virtue of the bearer's lacking a processual part as specified by the additional entity. quality PATO:0001558 lacking processual parts PATO:0001558 A quality of a process inhering in a bearer by virtue of the bearer's lacking a processual part as specified by the additional entity. PATOC:GVG A functionality quality which is held by the bearer when the latter is able to perform additional or different function(s). having supernumerary functions quality PATO:0001559 having extra function PATO:0001559 A functionality quality which is held by the bearer when the latter is able to perform additional or different function(s). PATO:MAH PATO:0001560 true A quality of a process inhering in a bearer by virtue of the bearer's having additional processual parts. having supernumerary processual parts quality PATO:0001561 having extra processual parts PATO:0001561 A quality of a process inhering in a bearer by virtue of the bearer's having additional processual parts. PATOC:GVG A mass which is lower than normal or average. PATO:0000579 low mass small mass quality PATO:0001562 decreased mass PATO:0001562 A mass which is lower than normal or average. PATO:GVG A mass which is higher than normal or average. PATO:0000578 high mass large mass quality PATO:0001563 increased mass PATO:0001563 A mass which is higher than normal or average. PATO:GVG A quality of a process inhering in a bearer by virtue of the bearer's processual parts. quality PATO:0001564 extra or missing processual parts PATO:0001564 A quality of a process inhering in a bearer by virtue of the bearer's processual parts. PATOC:GVG PATO:0001565 true A spatial pattern inhering in a bearer by virtue of the bearer's being spread out or scattered about or divided up. PATO:0001513 diffuse scattered quality PATO:0001566 distributed PATO:0001566 A spatial pattern inhering in a bearer by virtue of the bearer's being spread out or scattered about or divided up. WordNet:WordNet A spatial pattern inhering in a bearer by virtue of the bearer's not being spread out or scattered about or divided up. quality PATO:0001567 undistributed PATO:0001567 A spatial pattern inhering in a bearer by virtue of the bearer's not being spread out or scattered about or divided up. WordNet:WordNet PATO:0001568 true PATO:0001569 true A quality of a process inhering in a bearer by virtue of the bearer's having fewer processual parts. quality PATO:0001570 having decreased processual parts PATO:0001570 A quality of a process inhering in a bearer by virtue of the bearer's having fewer processual parts. PATO:GVG A size quality inhering in a bearer by virtue of the bearer's being made wider or larger in all dimensions. quality PATO:0001571 dilated PATO:0001571 A size quality inhering in a bearer by virtue of the bearer's being made wider or larger in all dimensions. WordNet:WordNet PATO:0001572 true A symmetry quality inhering in a bearer by virtue of the bearer's having equal dimensions or measurements. quality PATO:0001573 isometrical PATO:0001573 A symmetry quality inhering in a bearer by virtue of the bearer's having equal dimensions or measurements. WordNet:WordNet A physical quality inhering in a bearer by virtue of the bearer's motion characteristic. quality PATO:0001574 flow rate PATO:0001574 A physical quality inhering in a bearer by virtue of the bearer's motion characteristic. WordNet:WordNet A pressure which is relatively low. low pressure quality PATO:0001575 decreased pressure PATO:0001575 A pressure which is relatively low. PATO:GVG A pressure which is relatively high. high pressure quality PATO:0001576 increased pressure PATO:0001576 A pressure which is relatively high. PATO:GVG A permeability which is relatively high. high permeability quality PATO:0001577 increased permeability PATO:0001577 A permeability which is relatively high. PATO:GVG A permeability which is relatively low. low permeability quality PATO:0001578 decreased permeability PATO:0001578 A permeability which is relatively low. PATO:GVG A physical quality that is the ability to contract or shrink. quality PATO:0001579 contractility PATO:0001579 A physical quality that is the ability to contract or shrink. WordNet:WordNet A contractility which is relatively high. high contractility quality PATO:0001580 increased contractility PATO:0001580 A contractility which is relatively high. PATO:GVG A contractility which is relatively low. low contractility quality PATO:0001581 decreased contractility PATO:0001581 A contractility which is relatively low. PATO:GVG A spatial quality inhering in an inactive muscle or muscle fibers by virtue of the bearer's exhibiting gradual lengthening. quality PATO:0001582 GO has now relevant relation terms which should be used instead. obsolete relaxational quality true PATO:0001582 A spatial quality inhering in an inactive muscle or muscle fibers by virtue of the bearer's exhibiting gradual lengthening. WordNet:WordNet A variability which is relatively low. low variability quality PATO:0001583 decreased variability PATO:0001583 A variability which is relatively low. PATO:GVG A variability which is relatively high. high variability quality PATO:0001584 increased variability PATO:0001584 A variability which is relatively high. PATO:GVG A physical quality inhering in a bearer by virtue of the bearer's disposition to transmit of an entity through a medium. quality PATO:0001585 Examples could be heat or electricity or sound. conductivity PATO:0001585 A physical quality inhering in a bearer by virtue of the bearer's disposition to transmit of an entity through a medium. PATOC:GVG A variability quality inhering in a bearer by virtue of whether the bearer exhibits rate variation or change. quality PATO:0001586 variability of rate PATO:0001586 A variability quality inhering in a bearer by virtue of whether the bearer exhibits rate variation or change. PATO:GVG A variability of rate which is relatively high. high variability of rate quality PATO:0001587 increased variability of rate PATO:0001587 A variability of rate which is relatively high. PATO:GVG A variability of rate which is relatively low. low variability of rate quality PATO:0001588 decreased variability of rate PATO:0001588 A variability of rate which is relatively low. PATO:GVG Increased, intensified. quality PATO:0001589 Obsoleted because it used to be a child of behavioral quality, which really meant increased magnitude of a given behavior. Now this can be done by using increased magnitude with another quality. obsolete enhanced true PATO:0001589 Increased, intensified. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer's coinciding spatially, partially or wholly with another entity. overlap quality PATO:0001590 overlap with PATO:0001590 A structural quality inhering in a bearer by virtue of the bearer's coinciding spatially, partially or wholly with another entity. PATO:GVG A surface shape quality inhering in a bearer by virtue of the bearer's exhibiting a degree of bending. quality PATO:0001591 curvature PATO:0001591 A surface shape quality inhering in a bearer by virtue of the bearer's exhibiting a degree of bending. WordNet:WordNet A curvature which is relatively high. quality PATO:0001592 increased curvature PATO:0001592 A curvature which is relatively high. PATO:GVG A curvature which is relatively low. quality PATO:0001593 decreased curvature PATO:0001593 A curvature which is relatively low. PATO:GVG A concave quality inhering in a bearer by virtue of the bearer's forming or resembling an arch. quality PATO:0001594 arched PATO:0001594 A concave quality inhering in a bearer by virtue of the bearer's forming or resembling an arch. WordNet:WordNet A 1-D extent quality inhering in a bearer by virtue of the bearer's downward or backward or inward dimension. quality PATO:0001595 depth PATO:0001595 A 1-D extent quality inhering in a bearer by virtue of the bearer's downward or backward or inward dimension. WordNet:WordNet A depth quality which is relatively high. PATO:0001666 deep quality PATO:0001596 increased depth PATO:0001596 A depth quality which is relatively high. PATO:GVG An oriented quality inhering in a bearer by virtue of the bearer's being turned outward in placement. quality PATO:0001597 everted PATO:0001597 An oriented quality inhering in a bearer by virtue of the bearer's being turned outward in placement. thefreedictionary:thefreedictionary A quality inhering in a bearer by virtue of the bearer's extending out above or beyond a surface or boundary. PATO:0001644 protruding relational protruding quality quality PATO:0001598 protruding PATO:0001598 A quality inhering in a bearer by virtue of the bearer's extending out above or beyond a surface or boundary. WordNet:WordNet An oriented quality inhering in a bearer by virtue of the bearer's being relocated around an axis. rotation quality PATO:0001599 rotated PATO:0001599 An oriented quality inhering in a bearer by virtue of the bearer's being relocated around an axis. answers.com:answers.com A rotation quality inhering in a bearer by virtue of being rotated towards the rear of organism. quality PATO:0001600 posteriorly rotated PATO:0001600 A rotation quality inhering in a bearer by virtue of being rotated towards the rear of organism. PATOC:GVG A rotation quality inhering in a bearer by virtue of being rotated towards the front of an organism. quality PATO:0001601 anteriorly rotated PATO:0001601 A rotation quality inhering in a bearer by virtue of being rotated towards the front of an organism. PATOC:GVG A size quality inhering in a bearer by virtue of the bearer's being abnormally expanded or increased in size. quality expanded PATO:0001602 distended PATO:0001602 A size quality inhering in a bearer by virtue of the bearer's being abnormally expanded or increased in size. WordNet:WordNet A life span which is relatively high. high life span quality PATO:0001603 increased life span PATO:0001603 A life span which is relatively high. PATO:GVG A life span which is relatively low. low life span quality PATO:0001604 decreased life span PATO:0001604 A life span which is relatively low. PATO:GVG A spatial pattern inhering in a bearer by virtue of the bearer's being in disarray; extremely disorderly. quality PATO:0001605 disheveled PATO:0001605 A spatial pattern inhering in a bearer by virtue of the bearer's being in disarray; extremely disorderly. WordNet:WordNet A coating which is oily and slippery. quality PATO:0001606 greasy PATO:0001606 A coating which is oily and slippery. .answers.com:.answers.com A tangled quality inhering in a bearer by virtue of the bearer's being not possible to unravel. quality PATO:0001607 matted PATO:0001607 A tangled quality inhering in a bearer by virtue of the bearer's being not possible to unravel. PATOC:MAH A spatial pattern inhering in a bearer by virtue of the bearer's being marked by, consisting of, or diversified with patches. quality PATO:0001608 patchy PATO:0001608 A spatial pattern inhering in a bearer by virtue of the bearer's being marked by, consisting of, or diversified with patches. Merriam-Webster:Merriam-Webster A spatial pattern inhering in a bearer by virtue of the bearer's being scattered; spread irregularly, and at a distance from each other. quality PATO:0001609 sparse PATO:0001609 A spatial pattern inhering in a bearer by virtue of the bearer's being scattered; spread irregularly, and at a distance from each other. biology.lsu:biology.lsu PATO:0001610 true A variability quality inhering in a bearer by virtue of whether the bearer exhibits color variation or change. quality PATO:0001611 variability of color PATO:0001611 A variability quality inhering in a bearer by virtue of whether the bearer exhibits color variation or change. PATO:GVG A variability of color which is relatively high. high variability of color quality PATO:0001612 increased variability of color PATO:0001612 A variability of color which is relatively high. PATO:GVG A variability of color which is relatively low. low variability of color quality PATO:0001613 decreased variability of color PATO:0001613 A variability of color which is relatively low. PATO:GVG A variability quality inhering in a bearer by virtue of the bearer's lacking or not exhibiting variation of color. quality PATO:0001614 invariant color PATO:0001614 A variability quality inhering in a bearer by virtue of the bearer's lacking or not exhibiting variation of color. PATO:GVG A variability quality inhering in a bearer by virtue of the bearer's having or exhibiting variation of colour. quality PATO:0001615 variant color PATO:0001615 A variability quality inhering in a bearer by virtue of the bearer's having or exhibiting variation of colour. PATO:GVG PATO:0001616 true A morphological quality inhering in a bearer by virtue of the bearer's being distorted in form. quality disfigured distorted PATO:0001617 deformed PATO:0001617 A morphological quality inhering in a bearer by virtue of the bearer's being distorted in form. thefreedictionary.com:thefreedictionary.com A tonicity which is relatively high. high tonicity quality PATO:0001618 increased tonicity PATO:0001618 A tonicity which is relatively high. PATO:GVG A tonicity which is relatively low. low tonicity quality PATO:0001619 decreased tonicity PATO:0001619 A tonicity which is relatively low. PATO:GVG A structural quality inhering in a cell or blood vessel or capillary by virtue of the bearer's being in a rigid state of fullness resulting from pressure of the contents against the wall or membrane. quality PATO:0001620 turgor PATO:0001620 A structural quality inhering in a cell or blood vessel or capillary by virtue of the bearer's being in a rigid state of fullness resulting from pressure of the contents against the wall or membrane. WordNet:WordNet A turgor which is relatively low. low turgor quality PATO:0001621 decreased turgor PATO:0001621 A turgor which is relatively low. PATO:GVG A turgor which is relatively high. high turgor quality PATO:0001622 increased turgor PATO:0001622 A turgor which is relatively high. PATO:GVG A size quality inhering in a bearer by virtue of a part or parts of the bearer's being decreased in size due to reduction in tissue mass through wasting. atrophic quality PATO:0001623 atrophied PATO:0001623 A size quality inhering in a bearer by virtue of a part or parts of the bearer's being decreased in size due to reduction in tissue mass through wasting. Wiikipedia:Wasting Wikipedia:Atrophy A functionality quality held by the bearer when the latter exhibits decreased ability to perform a regular function(s). PATO:0001556 PATO:0001568 PATO:0001641 PATO:0001642 dysfunction dysfunctional having decreased function lacks function of type low functionality partial functionality quality impaired PATO:0001624 decreased functionality PATO:0001624 A functionality quality held by the bearer when the latter exhibits decreased ability to perform a regular function(s). PATO:MAH A functional quality held by the bearer when the latter exhibits increased ability to perform a regular function(s). high functionality quality PATO:0001625 increased functionality PATO:0001625 A functional quality held by the bearer when the latter exhibits increased ability to perform a regular function(s). PATO:MAH A structural quality inhering in a bearer by virtue of whether the bearer has enough functionality. quality adequacy PATO:0001626 This term and children should probably be obsoleted. sufficiency PATO:0001626 A structural quality inhering in a bearer by virtue of whether the bearer has enough functionality. PATO:GVG A wholeness quality inhering in a bearer by virtue of the bearer's has enough functionality. quality adequate PATO:0001627 sufficient PATO:0001627 A wholeness quality inhering in a bearer by virtue of the bearer's has enough functionality. PATO:GVG A wholeness quality inhering in a bearer by virtue of the bearer's lacks enough functionality. quality inadequate PATO:0001628 insufficient PATO:0001628 A wholeness quality inhering in a bearer by virtue of the bearer's lacks enough functionality. PATO:GVG A spatial pattern inhering in a bearer by virtue of the bearer's being gathered or tending to gather into a mass or whole. clumped clustered quality PATO:0001629 aggregated PATO:0001629 A spatial pattern inhering in a bearer by virtue of the bearer's being gathered or tending to gather into a mass or whole. WordNet:WordNet A positional quality inhering in a bearer by virtue of the bearer's being distributed or spread over a considerable extent. quality PATO:0001630 dispersed PATO:0001630 A positional quality inhering in a bearer by virtue of the bearer's being distributed or spread over a considerable extent. WordNet:WordNet PATO:0001631 true A spatial quality inhering in a bearer by virtue of the bearer's being located toward the front of an organism relative to another entity. preceding quality PATO:0001632 anterior to PATO:0001632 A spatial quality inhering in a bearer by virtue of the bearer's being located toward the front of an organism relative to another entity. PATOC:nw A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear of an organism relative to another entity. posterior (human torso) superior (human head) quality PATO:0001633 posterior to PATO:0001633 A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear of an organism relative to another entity. PATOC:nw A quality of a single physical entity inhering in a bearer by virtue of whether the bearer is essential or indispensable. quality PATO:0001634 necessity (continuant) PATO:0001634 A quality of a single physical entity inhering in a bearer by virtue of whether the bearer is essential or indispensable. WordNet:WordNet A necessity quality (continuant) inhering in a bearer by virtue of the bearer's being essential or indispensable. quality PATO:0001635 necessary (continuant) PATO:0001635 A necessity quality (continuant) inhering in a bearer by virtue of the bearer's being essential or indispensable. WordNet:WordNet A necessity quality (continuant) inhering in a bearer by virtue of the bearer's being non-essential or dispensable. quality PATO:0001636 unnecessary (continuant) PATO:0001636 A necessity quality (continuant) inhering in a bearer by virtue of the bearer's being non-essential or dispensable. WordNet:WordNet A quality of single process inhering in a bearer by virtue of whether the bearer is essential or indispensable. quality PATO:0001637 necessity of occurrent PATO:0001637 A quality of single process inhering in a bearer by virtue of whether the bearer is essential or indispensable. PATO:GVG A necessity quality inhering in a process by virtue of the bearer's being essential or indispensable. quality PATO:0001638 necessary (occurrent) PATO:0001638 A necessity quality inhering in a process by virtue of the bearer's being essential or indispensable. PATO:GVG A necessity quality inhering in a process by virtue of the bearer's being non-essential or dispensable. quality PATO:0001639 unnecessary (occurrent) PATO:0001639 A necessity quality inhering in a process by virtue of the bearer's being non-essential or dispensable. PATO:GVG PATO:0001640 true PATO:0001641 true PATO:0001642 true A size quality inhering in a bearer by virtue of the bearer's having a short, stocky build. quality PATO:0001643 stubby PATO:0001643 A size quality inhering in a bearer by virtue of the bearer's having a short, stocky build. thefreedictionary.com:thefreedictionary.com PATO:0001644 true A quality inhering into a bearer by virtue of the bearer's extending out above or beyond its surface or boundary into the surface or boundary of another entity. quality PATO:0001645 protruding into PATO:0001645 A quality inhering into a bearer by virtue of the bearer's extending out above or beyond its surface or boundary into the surface or boundary of another entity. PATOC:nc A quality inhering into a bearer by virtue of the bearer's extending out above or beyond its surface or boundary and outwards in relation to the physical space occupied by another entity. extruding from quality exits through exposed PATO:0001646 protruding out of PATO:0001646 A quality inhering into a bearer by virtue of the bearer's extending out above or beyond its surface or boundary and outwards in relation to the physical space occupied by another entity. PATOC:nc PATO:0001647 true An 1-D extent quality which is equal to the length of the closed curve of a circle. quality PATO:0001648 circumference PATO:0001648 An 1-D extent quality which is equal to the length of the closed curve of a circle. WordNet:WordNet A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the side. quality PATO:0001649 curved lateral PATO:0001649 A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the side. PATOC:GVG A resistance to a stimulus which is relatively high. high resistance to increased resistance quality PATO:0001650 increased resistance to PATO:0001650 A resistance to a stimulus which is relatively high. PATOC:GVG A resistance to a stimulus which is relatively low. decreased resistance low resistance to quality PATO:0001651 decreased resistance to PATO:0001651 A resistance to a stimulus which is relatively low. PATOC:GVG A spatial quality inhering in a bearer by virtue of the bearer's spatial positioning with respect to an additional entity. quality PATO:0001652 alignment PATO:0001652 A spatial quality inhering in a bearer by virtue of the bearer's spatial positioning with respect to an additional entity. PATOC:GVG An alignment quality inhering in a bearer by virtue of the bearer's being in a proper spatial positioning with respect to an additional entity. aligned quality aligned to PATO:0001653 aligned with PATO:0001653 An alignment quality inhering in a bearer by virtue of the bearer's being in a proper spatial positioning with respect to an additional entity. PATO:GVG An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning with respect to an additional entity. misaligned unaligned with quality PATO:0001654 misaligned with PATO:0001654 An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning with respect to an additional entity. PATOC:GVG A concentration quality inhering in a bearer by virtue of the bearer's amount of osmoles of solute per liter of solution. quality PATO:0001655 osmolarity PATO:0001655 A concentration quality inhering in a bearer by virtue of the bearer's amount of osmoles of solute per liter of solution. Wikipedia:http://en.wikipedia.org/wiki/Osmolarity A osmolarity which is relatively low. low osmolarity quality PATO:0001656 decreased osmolarity PATO:0001656 A osmolarity which is relatively low. PATOC:GVG A osmolarity which is relatively high. high osmolarity quality PATO:0001657 increased osmolarity PATO:0001657 A osmolarity which is relatively high. PATOC:GVG A rotation quality inhering in a bearer by virtue of being rotated towards the back or upper surface of an organism. quality PATO:0001658 dorsally rotated PATO:0001658 A rotation quality inhering in a bearer by virtue of being rotated towards the back or upper surface of an organism. PATOC:GVG A rotation quality inhering in a bearer by virtue of being rotated towards the abdomen of an organism. quality PATO:0001659 ventrally rotated PATO:0001659 A rotation quality inhering in a bearer by virtue of being rotated towards the abdomen of an organism. PATOC:GVG An action potential which is relatively low. low action potential quality PATO:0001660 obsolete decreased action potential true PATO:0001660 An action potential which is relatively low. PATOC:GVG An action potential which is relatively high. high action potential quality PATO:0001661 obsolete increased action potential true PATO:0001661 An action potential which is relatively high. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer's disposition to being damaged or destroyed. quality PATO:0001662 fragility PATO:0001662 A structural quality inhering in a bearer by virtue of the bearer's disposition to being damaged or destroyed. WordNet:WordNet A solubility which is relatively high. high solubility quality PATO:0001663 increased solubility PATO:0001663 A solubility which is relatively high. PATO:GVG A solubility which is relatively low. low solubility quality PATO:0001664 decreased solubility PATO:0001664 A solubility which is relatively low. PATO:GVG A spatial pattern inhering in a bearer by virtue of the bearer's being located near a surface. PATO:0001471 superficial to quality PATO:0001665 superficial PATO:0001665 A spatial pattern inhering in a bearer by virtue of the bearer's being located near a surface. Dictionary.com:Dictionary.com PATO:0001666 true An attachment quality inhering in a bearer by virtue of the bearer's connection or association with another entity. attached quality affixed to PATO:0001667 attached to PATO:0001667 An attachment quality inhering in a bearer by virtue of the bearer's connection or association with another entity. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer's being in close proximity and physically interacting with another entity. associated quality PATO:0001668 associated with PATO:0001668 A structural quality inhering in a bearer by virtue of the bearer's being in close proximity and physically interacting with another entity. PATOC:GVG A susceptibility toward an external stimulus which is higher than normal/average. high susceptibility toward increased susceptibility quality PATO:0001669 increased susceptibility toward PATO:0001669 A susceptibility toward an external stimulus which is higher than normal/average. PATOC:GVG A susceptibility toward an external stimulus which is lower than normal/average. decreased susceptibility low susceptibility toward quality PATO:0001670 decreased susceptibility toward PATO:0001670 A susceptibility toward an external stimulus which is lower than normal/average. PATOC:GVG A distribution which is relatively high. high distribution quality PATO:0001671 increased distribution PATO:0001671 A distribution which is relatively high. PATOC:GVG A distribution which is relatively low. low distribution quality PATO:0001672 decreased distribution PATO:0001672 A distribution which is relatively low. PATOC:GVG Structure quality that is the presence of at least one sac-like closed membranous structure containing one or more liquid or solid organism substances. cysts quality PATO:0001673 Cystic is an abnormal condition. cystic PATO:0001673 Structure quality that is the presence of at least one sac-like closed membranous structure containing one or more liquid or solid organism substances. PATOC:MAH A concentration quality inhering in a bearer by virtue of the bearer's catalytic activity divided by the volume of the system. quality PATO:0001674 catalytic (activity) concentration PATO:0001674 A concentration quality inhering in a bearer by virtue of the bearer's catalytic activity divided by the volume of the system. IUPAC:IUPAC An efficiency which is relatively low. low efficiency quality PATO:0001675 decreased efficiency PATO:0001675 An efficiency which is relatively low. PATOC:GVG An efficiency which is relatively high. high efficiency quality PATO:0001676 increased efficiency PATO:0001676 An efficiency which is relatively high. PATOC:GVG An efficiency quality inhering in a bearer by virtue of the bearer's lacking efficiency. quality PATO:0001677 inefficient PATO:0001677 An efficiency quality inhering in a bearer by virtue of the bearer's lacking efficiency. PATOC:GVG An efficiency quality inhering in a bearer by virtue of the bearer's having efficiency. quality PATO:0001678 efficient PATO:0001678 An efficiency quality inhering in a bearer by virtue of the bearer's having efficiency. PATOC:GVG A volume quality inhering in a mass of substance by virtue of the amount of 3-dimensional space it occupies. quality PATO:0001679 The reciprocal of density. specific volume PATO:0001679 A volume quality inhering in a mass of substance by virtue of the amount of 3-dimensional space it occupies. Wikipedia:http://en.wikipedia.org/wiki/Specific_volume A volume quality inhering in a homogeneous substance containing 6.02 x 1023 atoms or molecules by virtue of the amount of 3-dimensional space it occupies. quality PATO:0001680 molar volume PATO:0001680 A volume quality inhering in a homogeneous substance containing 6.02 x 1023 atoms or molecules by virtue of the amount of 3-dimensional space it occupies. Wikipedia:http://en.wikipedia.org/wiki/Molar_volume A physical quality that inheres in a homogeneous substance containing 6.02 x 1023 atoms or molecules. quality PATO:0001681 molar mass PATO:0001681 A physical quality that inheres in a homogeneous substance containing 6.02 x 1023 atoms or molecules. Wikipedia:http://en.wikipedia.org/wiki/Molar_mass A physical quality inhering in a bearer by virtue of the bearer's disposition to exert an attractive or repulsive force on other entities. quality PATO:0001682 magnetism PATO:0001682 A physical quality inhering in a bearer by virtue of the bearer's disposition to exert an attractive or repulsive force on other entities. Wikipedia:http://en.wikipedia.org/wiki/Magnetism A magnetism which is relatively high. high magnetism quality PATO:0001683 increased magnetism PATO:0001683 A magnetism which is relatively high. PATOC:GVG A magnetism which is relatively low. low magnetism quality PATO:0001684 decreased magnetism PATO:0001684 A magnetism which is relatively low. PATOC:GVG A magnetic quality inhering in a bearer by virtue of the bearer's ability to exert magnitism. quality PATO:0001685 magnetic PATO:0001685 A magnetic quality inhering in a bearer by virtue of the bearer's ability to exert magnitism. PATOC:GVG A magnetic quality inhering in a bearer by virtue of the bearer's inability to exert magnitism. quality PATO:0001686 non-magnetic PATO:0001686 A magnetic quality inhering in a bearer by virtue of the bearer's inability to exert magnitism. PATOC:GVG A positional quality inhering in a bearer by virtue of the bearer's vertical distance of a point above or below a reference surface. quality PATO:0001687 elevation PATO:0001687 A positional quality inhering in a bearer by virtue of the bearer's vertical distance of a point above or below a reference surface. Trailillustrated:Trailillustrated An elevation which is relatively high. high elevation quality elevated PATO:0001688 increased elevation PATO:0001688 An elevation which is relatively high. PATOC:GVG An elevation which is relatively low. low elevation quality PATO:0001689 decreased elevation PATO:0001689 An elevation which is relatively low. PATOC:GVG A contractility quality inhering in a bearer by virtue of the bearer's ability of contracting or being contracted. quality PATO:0001690 This refers to the disposition of the bearer. contractile PATO:0001690 A contractility quality inhering in a bearer by virtue of the bearer's ability of contracting or being contracted. PATOC:GVG A contractility quality inhering in a bearer by virtue of the bearer's inability of contracting or being contracted. quality PATO:0001691 This refers to the disposition of the bearer. non-contractile PATO:0001691 A contractility quality inhering in a bearer by virtue of the bearer's inability of contracting or being contracted. PATOC:GVG PATO:0001692 true A viscosity which relatively high. high viscosity quality PATO:0001693 increased viscosity PATO:0001693 A viscosity which relatively high. PATOC:GVG A viscosity which relatively low. low viscosity quality PATO:0001694 decreased viscosity PATO:0001694 A viscosity which relatively low. PATOC:GVG A fecundity which is relatively high. high fecundity quality PATO:0001695 increased fecundity PATO:0001695 A fecundity which is relatively high. PATOC:GVG A fecundity which is relatively low. low fecundity quality PATO:0001696 decreased fecundity PATO:0001696 A fecundity which is relatively low. PATOC:GVG A photosensitivity which is relatively low. low photosensitivity quality PATO:0001697 decreased photosensitivity PATO:0001697 A photosensitivity which is relatively low. PATOC:GVG A photosensitivity which is relatively high. high photosensitivity quality PATO:0001698 increased photosensitivity PATO:0001698 A photosensitivity which is relatively high. PATOC:GVG A sleep pattern which has regular start and/or end times. quality PATO:0001699 regular sleep pattern PATO:0001699 A sleep pattern which has regular start and/or end times. PATOC:GVG A sleep pattern which has irregular start and/or end times. quality PATO:0001700 irregular sleep pattern PATO:0001700 A sleep pattern which has irregular start and/or end times. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's exhibiting complete growth, differentiation, or development. quality PATO:0001701 mature PATO:0001701 A quality inhering in a bearer by virtue of the bearer's exhibiting complete growth, differentiation, or development. Merriam-Webster:Merriam-Webster A color consisting of violet hue and high saturation. quality bright violet PATO:0001702 saturated violet PATO:0001702 A color consisting of violet hue and high saturation. PATOC:GVG A color consisting of violet hue and low saturation. pale violet quality PATO:0001703 desaturated violet PATO:0001703 A color consisting of violet hue and low saturation. PATOC:GVG A color consisting of violet hue and high brightness. quality PATO:0001704 light violet PATO:0001704 A color consisting of violet hue and high brightness. PATOC:GVG A color consisting of violet hue and low brightness. quality PATO:0001705 dark violet PATO:0001705 A color consisting of violet hue and low brightness. PATOC:GVG A behavioral quality inhering in a bearer by virtue of the bearer's disposition to lack activity. quality PATO:0001706 behavioural inactive PATO:0001706 A behavioral quality inhering in a bearer by virtue of the bearer's disposition to lack activity. PATOC:GVG A behavioral quality of a process inhering in a bearer by virtue of the bearer's exhibiting marked activity. quality PATO:0001707 behavioural active PATO:0001707 A behavioral quality of a process inhering in a bearer by virtue of the bearer's exhibiting marked activity. PATOC:GVG A size quality inhering in an bearer by virtue of the bearer's extension in one dimension. 1-D size quality PATO:0001708 1-D extent PATO:0001708 A size quality inhering in an bearer by virtue of the bearer's extension in one dimension. PATOC:GVG A size quality inhering in an bearer by virtue of the bearer's extension in two dimensions. 2-D size quality PATO:0001709 2-D extent PATO:0001709 A size quality inhering in an bearer by virtue of the bearer's extension in two dimensions. PATOC:GVG A size quality inhering in an bearer by virtue of the bearer's extension in three dimensions. 3D size quality PATO:0001710 3-D extent PATO:0001710 A size quality inhering in an bearer by virtue of the bearer's extension in three dimensions. PATOC:GVG An 1-D extent quality inhering in two-dimensional bearer by virtue of being equal to the distance around it. quality PATO:0001711 perimeter PATO:0001711 An 1-D extent quality inhering in two-dimensional bearer by virtue of being equal to the distance around it. Wikipedia:http://en.wikipedia.org/wiki/Perimeter A perimeter which is relatively high. quality PATO:0001712 increased perimeter PATO:0001712 A perimeter which is relatively high. PATOC:GVG A perimeter which is relatively low. quality PATO:0001713 decreased perimeter PATO:0001713 A perimeter which is relatively low. PATOC:GVG A diameter which is relatively large. quality PATO:0001714 increased diameter PATO:0001714 A diameter which is relatively large. PATOC:GVG A diameter which is relatively small. quality PATO:0001715 decreased diameter PATO:0001715 A diameter which is relatively small. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer's ability to withstand great strain without tearing or breaking. quality resilient strong tough PATO:0001716 non-fragile PATO:0001716 A structural quality inhering in a bearer by virtue of the bearer's ability to withstand great strain without tearing or breaking. thefreedictionary.com:thefreedictionary.com A radiation emitting quality which obtains by the intensity of the bearer emitted radiation. quality PATO:0001717 radiation emitting intensity quality PATO:0001717 A radiation emitting quality which obtains by the intensity of the bearer emitted radiation. PATOC:GVG A quality that exists by virtue of the luminous intensity per unit area projected in a given direction. quality PATO:0001718 luminance PATO:0001718 A quality that exists by virtue of the luminous intensity per unit area projected in a given direction. Wikipedia:http://en.wikipedia.org/wiki/Luminance A behavioral quality which holds by virtue of whether the bearer exhibits the ability to receive another agentitive entity. quality PATO:0001719 receptivity PATO:0001719 A behavioral quality which holds by virtue of whether the bearer exhibits the ability to receive another agentitive entity. PATOC:cjm A behavioral quality which holds by virtue of extent of the receptiveness of a female to male advances. quality PATO:0001720 female receptivity PATO:0001720 A behavioral quality which holds by virtue of extent of the receptiveness of a female to male advances. GO:GO A behavioral quality which holds by virtue of extent of the receptiveness of a male to female advances. quality PATO:0001721 male receptivity PATO:0001721 A behavioral quality which holds by virtue of extent of the receptiveness of a male to female advances. PATOC:GVG PATO:0001722 true A female receptivity which is relatively high. high female receptivity quality PATO:0001723 increased female receptivity PATO:0001723 A female receptivity which is relatively high. PATOC:GVG A female receptivity which is relatively low. low female receptivity quality PATO:0001724 decreased female receptivity PATO:0001724 A female receptivity which is relatively low. PATOC:GVG A male receptivity which is relatively high. high male receptivity quality PATO:0001725 increased male receptivity PATO:0001725 A male receptivity which is relatively high. PATOC:GVG A male receptivity which is relatively low. low male receptivity quality PATO:0001726 decreased male receptivity PATO:0001726 A male receptivity which is relatively low. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's prevailing tendency, mood, or inclination. quality tendency PATO:0001727 disposition PATO:0001727 A quality inhering in a bearer by virtue of the bearer's prevailing tendency, mood, or inclination. Merriam-Webster:Merriam-Webster A disposition inhering in a multi-cellular organism. quality PATO:0001728 multi-cellular organismal disposition PATO:0001728 A disposition inhering in a multi-cellular organism. PATOC:GVG An organismal quality inhering in a bearer by virtue of the bearer's disposition to lose an entity by natural process. quality PATO:0001729 shedability PATO:0001729 An organismal quality inhering in a bearer by virtue of the bearer's disposition to lose an entity by natural process. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's disposition to shed body parts. quality PATO:0001730 deciduous (generic) PATO:0001730 A quality inhering in a bearer by virtue of the bearer's disposition to shed body parts. PATOC:GVG A quality inhering in a plant by virtue of the bearer's disposition to shed foliage. quality PATO:0001731 deciduous (plant) PATO:0001731 A quality inhering in a plant by virtue of the bearer's disposition to shed foliage. PATOC:cjm A quality inhering in a plant by virtue of the bearer's disposition to not shed any body part. quality PATO:0001732 non-deciduous (any body part) PATO:0001732 A quality inhering in a plant by virtue of the bearer's disposition to not shed any body part. PATOC:GVG A quality inhering in a plant by virtue of the bearer's disposition to retain foliage. quality PATO:0001733 evergreen (plant) PATO:0001733 A quality inhering in a plant by virtue of the bearer's disposition to retain foliage. PATOC:GVG A quality inhering in a plant by virtue of the bearer's disposition to being between evergeen and deciduous. quality PATO:0001734 semi-deciduous(plant) PATO:0001734 A quality inhering in a plant by virtue of the bearer's disposition to being between evergeen and deciduous. PATOC:cjm A physical quality inhering in a bearer by virtue of the bearer's parts having the arrangement which exhibits characteristics of liquids. liquid quality PATO:0001735 liquid configuration PATO:0001735 A physical quality inhering in a bearer by virtue of the bearer's parts having the arrangement which exhibits characteristics of liquids. PATOC:GVG A physical quality inhering in a bearer by virtue of the bearer's parts having the arrangement which exhibits characteristics of solids. solid quality PATO:0001736 solid configuration PATO:0001736 A physical quality inhering in a bearer by virtue of the bearer's parts having the arrangement which exhibits characteristics of solids. PATOC:GVG A physical quality inhering in a bearer by virtue of the bearer's parts having the arrangement which exhibits characteristics of gases. gas quality PATO:0001737 gaseus configuration PATO:0001737 A physical quality inhering in a bearer by virtue of the bearer's parts having the arrangement which exhibits characteristics of gases. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer's lacking physically interaction with another entity. dissociated quality PATO:0001738 dissociated from PATO:0001738 A structural quality inhering in a bearer by virtue of the bearer's lacking physically interaction with another entity. PATOC:GVG A quality of radiation that reflects the fluence spectrum of charged and neutral particles within the material or medium where dose is being deposited. quality PATO:0001739 Radiation quality is often expressed in terms of the linear energy transfer of the ionising particles that deliver the absorbed dose, but this is an over simplification. radiation quality PATO:0001739 A quality of radiation that reflects the fluence spectrum of charged and neutral particles within the material or medium where dose is being deposited. DOI:10.20348/STOREDB/1173/1250 https://orcid.org/0000-0002-5111-7263 Radiation quality is often expressed in terms of the linear energy transfer of the ionising particles that deliver the absorbed dose, but this is an over simplification. DOI:10.2307/3570787 A radiation quality inhering in a radioactive substance by virtue of its transformation (disintegration) rate. ENVO:03510037 radioactivity quality PATO:0001740 See https://github.com/pato-ontology/pato/issues/490 activity (of a radionuclide) PATO:0001740 A radiation quality inhering in a radioactive substance by virtue of its transformation (disintegration) rate. PATOC:GVG A radiation quality inhering in bearer by virtue of the bearer's exhibiting or being caused by radioactivity. quality PATO:0001741 radioactive PATO:0001741 A radiation quality inhering in bearer by virtue of the bearer's exhibiting or being caused by radioactivity. WordNet:WordNet A radioactivity which is relatively low. high radioactivity quality PATO:0001742 increased radioactivity PATO:0001742 A radioactivity which is relatively low. PATOC:GVG A radioactivity which is relatively high. low radioactivity quality PATO:0001743 decreased radioactivity PATO:0001743 A radioactivity which is relatively high. PATOC:GVG A quality of a substance inhering in a bearer by virtue of it being currently or previously exposed to electromagnetic radiation, radiation exposed quality PATO:0001744 This may refer to incident external irradiation or internal radiation from an ingested or otherwise internal source. irradiated PATO:0001744 A quality of a substance inhering in a bearer by virtue of it being currently or previously exposed to electromagnetic radiation, ISSN:9781496335418 https://orcid.org/0000-0002-5111-7263 OBSOLETE A radiation exposure quality inhering in a substance by virtue of the radiation energy "deposited" in a kilogram of a substance. quality PATO:0001745 https://github.com/pato-ontology/pato/issues/485 obsolete radiation absorbed dose true PATO:0001745 OBSOLETE A radiation exposure quality inhering in a substance by virtue of the radiation energy "deposited" in a kilogram of a substance. arpansa:arpansa OBSOLETE A radiation exposure quality inhering in a tissue by virtue of the relation between the absorbed dose to the effective biological damage of the radiation to that tissue. quality PATO:0001746 See: https://github.com/pato-ontology/pato/issues/485 obsolete radiation equivalent dose true PATO:0001746 OBSOLETE A radiation exposure quality inhering in a tissue by virtue of the relation between the absorbed dose to the effective biological damage of the radiation to that tissue. arpansa:arpansa OBSOLETE A radiation exposure quality inhering in an organ by virtue of the multiplication of an equivalent dose to that organ multiplied by the tissue weighting factor for that organ. quality PATO:0001747 See: https://github.com/pato-ontology/pato/issues/485 obsolete radiation effective dose true PATO:0001747 OBSOLETE A radiation exposure quality inhering in an organ by virtue of the multiplication of an equivalent dose to that organ multiplied by the tissue weighting factor for that organ. arpansa:arpansa A shape quality in which a portion of the outermost boundary of an entity folds in space such that a portion that was originally convex is now concave. quality PATO:0001748 invaginated PATO:0001748 A shape quality in which a portion of the outermost boundary of an entity folds in space such that a portion that was originally convex is now concave. PATOC:GVG A heterochronic growth quality inhering in an organism, structure, or group of organisms by virtue of the bearer's reduced growth. hypoplastic growth pedomorphic growth quality PATO:0001749 paedomorphic growth PATO:0001749 A heterochronic growth quality inhering in an organism, structure, or group of organisms by virtue of the bearer's reduced growth. PATOC:mh A paedomorphic growth quality which is due to a delayed onset. quality PATO:0001750 postdisplaced growth PATO:0001750 A paedomorphic growth quality which is due to a delayed onset. PATOC:mh A paedomorphic growth quality which is due to an earlier offset. quality PATO:0001751 progenetic growth PATO:0001751 A paedomorphic growth quality which is due to an earlier offset. PATOC:mh A heterochronic growth quality inhering in an organism, structure, or group of organisms by virtue of the bearer's increased growth. hyperplastic growth quality PATO:0001752 peramorphic growth PATO:0001752 A heterochronic growth quality inhering in an organism, structure, or group of organisms by virtue of the bearer's increased growth. PATOC:mh A peramorphic growth quality which is due to an increased rate. quality PATO:0001753 accelerated growth PATO:0001753 A peramorphic growth quality which is due to an increased rate. PATOC:mh A peramorphic growth quality which is due to an earlier onset. precocious growth quality PATO:0001754 predisplaced growth PATO:0001754 A peramorphic growth quality which is due to an earlier onset. PATOC:mh A peramorphic growth quality which is due to a delayed offset. quality PATO:0001755 hypermorphic growth PATO:0001755 A peramorphic growth quality which is due to a delayed offset. PATOC:mh A conductivity quality inhering in a bearer by virtue of the bearer's disposition to spontaneous transfer of thermal energy from a region of higher temperature to a region of lower temperature. thermal conduction quality PATO:0001756 heat conductivity PATO:0001756 A conductivity quality inhering in a bearer by virtue of the bearer's disposition to spontaneous transfer of thermal energy from a region of higher temperature to a region of lower temperature. Wikipedia:http://en.wikipedia.org/wiki/Heat_conduction A conductivity quality inhering in a bearer by virtue of the bearer's ability to convey electricity. quality PATO:0001757 electrical conductivity PATO:0001757 A conductivity quality inhering in a bearer by virtue of the bearer's ability to convey electricity. Wikipedia:http://en.wikipedia.org/wiki/Electrical_conduction A conductivity quality inhering in motor and sensory nerves by virtue of the bearer's ability to convey electricity. quality PATO:0001758 nerve conductivity PATO:0001758 A conductivity quality inhering in motor and sensory nerves by virtue of the bearer's ability to convey electricity. PATOC:GVG A composition quality inhering in a bearer by virtue of the bearer's containing granules. quality PATO:0001759 granular PATO:0001759 A composition quality inhering in a bearer by virtue of the bearer's containing granules. thefreedictionary.com:thefreedictionary.com quality PATO:0001760 female semi-fertile PATO:0001760 quality PATO:0001761 male semi-fertile PATO:0001761 quality PATO:0001762 male semi-sterile PATO:0001762 quality PATO:0001763 female semi-sterile PATO:0001763 An age which is high relative to the normal or average. high age quality PATO:0001764 increased age PATO:0001764 An age which is high relative to the normal or average. PATOC:GVG An age which is low relative to the normal or average. low age quality PATO:0001765 decreased age PATO:0001765 An age which is low relative to the normal or average. PATOC:GVG A cellular quality inhering in a cell by virtue of its anisotropic intracellular organization. quality PATO:0001766 obsolete cellular polarity true PATO:0001766 A cellular quality inhering in a cell by virtue of its anisotropic intracellular organization. PATOC:GVG quality PATO:0001767 semi-fertile PATO:0001767 A viability quality inhering in a bearer or a population by virtue of some of it's members' inability to survive to reproduce. quality PATO:0001768 semi-lethal (sensu genetics) PATO:0001768 A viability quality inhering in a bearer or a population by virtue of some of it's members' inability to survive to reproduce. PATOC:CVC A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along an axis. quality cellular polarity PATO:0001769 positional polarity PATO:0001769 A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along an axis. PATOC:MAH cellular polarity PATOC:MAH A viability quality inhering in a population by virtue of some of it's members' ability to survive. quality PATO:0001770 semi-viable PATO:0001770 A viability quality inhering in a population by virtue of some of it's members' ability to survive. PATOC:CVC PATO:0001771 true A spatial quality inhering in a bearer by virtue of the bearer's being extended on all sides of another entity simultaneously. encircling enclosing wrapping quality PATO:0001772 Nedd to add reciprocal of relationship to 'surrounded by' PATO:0005016. surrounding PATO:0001772 A spatial quality inhering in a bearer by virtue of the bearer's being extended on all sides of another entity simultaneously. thefreedictionary.com:thefreedictionary.com A quality inhering in a bearer by virtue of the bearer's having only one phase or stage. quality PATO:0001773 monophasic PATO:0001773 A quality inhering in a bearer by virtue of the bearer's having only one phase or stage. hefreedictionary.com:hefreedictionary.com A quality inhering in a bearer by virtue of the bearer's having or existing in many phases. quality PATO:0001774 polyphasic PATO:0001774 A quality inhering in a bearer by virtue of the bearer's having or existing in many phases. PATOC:GVG A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along the dorsal-ventral axis. quality PATO:0001775 dorsal-ventral polarity PATO:0001775 A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along the dorsal-ventral axis. PATOC:MAH A flexibility which is relatively high. high flexibility quality PATO:0001776 increased flexibility PATO:0001776 A flexibility which is relatively high. PATOC:GVG A flexibility which is relatively low. low flexibility quality PATO:0001777 decreased flexibility PATO:0001777 A flexibility which is relatively low. PATOC:GVG A strength which is relatively high. high strength quality PATO:0001778 increased strength PATO:0001778 A strength which is relatively high. PATOC:GVG A strength which is relatively low. weak quality PATO:0001779 decreased strength PATO:0001779 A strength which is relatively low. PATOC:GVG A size quality inhering in a bearer by virtue of the bearer's being abnormally developed, usually due to malnutrition. dystrophied quality dystrophy PATO:0001780 dystrophic PATO:0001780 A size quality inhering in a bearer by virtue of the bearer's being abnormally developed, usually due to malnutrition. Wiikipedia:Wiikipedia A thickness quality which lacks pattern. quality PATO:0001781 irregular thickness PATO:0001781 A thickness quality which lacks pattern. PATOC:GVG An intensity which is relatively high. high intensity quality PATO:0001782 increased intensity PATO:0001782 An intensity which is relatively high. PATOC:GVG An intensity which is relatively low. low intensity quality PATO:0001783 decreased intensity PATO:0001783 An intensity which is relatively low. PATOC:GVG A branched quality inhering in a bearer by virtue of the bearer's being divided into two branches. PATO:0001572 bifid quality forked PATO:0001784 bifurcated PATO:0001784 A branched quality inhering in a bearer by virtue of the bearer's being divided into two branches. thefreedictionary.com:thefreedictionary.com A curvature quality inhering in a bearer by virtue of the bearer's being curved outward. quality PATO:0001785 TODO: obsolete, definition too ambiguous. splayed PATO:0001785 A curvature quality inhering in a bearer by virtue of the bearer's being curved outward. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's being divided or broken up into parts or divisions. clefted septate quality divided forked subdivided PATO:0001786 split PATO:0001786 A shape quality inhering in a bearer by virtue of the bearer's being divided or broken up into parts or divisions. die.net:die.net A curvature quality inhering in a bearer by virtue of the bearer's being curved around an axis. quality PATO:0001787 rotational curvature PATO:0001787 A curvature quality inhering in a bearer by virtue of the bearer's being curved around an axis. PATOC:GVG A density which is higher relative to the normal or average. high density quality PATO:0001788 increased mass density PATO:0001788 A density which is higher relative to the normal or average. PATOC:GVG A curvature quality inhering in a bearer by virtue of the bearer's having a shape resembling a dome. quality PATO:0001789 domed PATO:0001789 A curvature quality inhering in a bearer by virtue of the bearer's having a shape resembling a dome. PATOC:GVG A density which is lower relative to the normal or average. low density quality PATO:0001790 decreased mass density PATO:0001790 A density which is lower relative to the normal or average. PATOC:GVG A spatial pattern inhering in a bearer by virtue of the bearer's being confined or restricted to multiple locations. multi-focal quality PATO:0001791 multi-localised PATO:0001791 A spatial pattern inhering in a bearer by virtue of the bearer's being confined or restricted to multiple locations. PATOC:GVG A spatial quality inhering in a bearer by virtue of the bearer's being located on left side of from the a another entity. quality PATO:0001792 left side of PATO:0001792 A spatial quality inhering in a bearer by virtue of the bearer's being located on left side of from the a another entity. PATOC:GVG A spatial quality inhering in a bearer by virtue of the bearer's being located on right side of a another entity. quality PATO:0001793 right side of PATO:0001793 A spatial quality inhering in a bearer by virtue of the bearer's being located on right side of a another entity. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's being wound in a continuous series of loops. quality PATO:0001794 coiling PATO:0001794 A shape quality inhering in a bearer by virtue of the bearer's being wound in a continuous series of loops. Online_Dictionary:Online_Dictionary A coiling which is relatively high. high coiling quality PATO:0001795 increased coiling PATO:0001795 A coiling which is relatively high. PATOC:GVG A coiling which is relatively low. low coiling quality PATO:0001796 decreased coiling PATO:0001796 A coiling which is relatively low. PATOC:GVG PATO:0001797 true A shape quality inhering in a bearer by virtue of the bearer's having multiple angles in its length. quality tightly curled twisted PATO:0001798 kinked PATO:0001798 A shape quality inhering in a bearer by virtue of the bearer's having multiple angles in its length. thefreedictionary.com:thefreedictionary.com A shape quality inhering in a bearer by virtue of the bearer's exhibiting disturbance of its smoothness or regularity. quality PATO:0001799 ruffled PATO:0001799 A shape quality inhering in a bearer by virtue of the bearer's exhibiting disturbance of its smoothness or regularity. .thefreedictionary.com:.thefreedictionary.com A composition quality inhering in an bearer by virtue of the quantities or relative ratios of water of the inhering entity. quality PATO:0001800 water composition PATO:0001800 A composition quality inhering in an bearer by virtue of the quantities or relative ratios of water of the inhering entity. PATOC:GVG A composition quality inhering in an bearer by virtue of the reduction in amount of water the bearer contains. dehydrated quality dry PATO:0001801 decreased water composition PATO:0001801 A composition quality inhering in an bearer by virtue of the reduction in amount of water the bearer contains. Wikipedia:http://en.wikipedia.org/wiki/Dehydrated A pattern quality inhering in a bearer by virtue of the bearer's not being compact or dense in arrangement. quality PATO:0001802 loose PATO:0001802 A pattern quality inhering in a bearer by virtue of the bearer's not being compact or dense in arrangement. answers.com:answers.com A photosensitivity quality inhering in a bearer by virtue of the bearer's disposition to being susceptible to damage by light. quality PATO:0001803 phototoxic PATO:0001803 A photosensitivity quality inhering in a bearer by virtue of the bearer's disposition to being susceptible to damage by light. answers.com:answers.com A texture quality inhering in a bearer by virtue of the bearer's being covered or partially covered with scales. quality squamous PATO:0001804 scaly PATO:0001804 A texture quality inhering in a bearer by virtue of the bearer's being covered or partially covered with scales. answers.com:answers.com A texture quality inhering in a bearer by virtue of the bearer's formed or tending to form flakes or thin, crisp fragments. quality PATO:0001805 flaky PATO:0001805 A texture quality inhering in a bearer by virtue of the bearer's formed or tending to form flakes or thin, crisp fragments. answers.com:answers.com A sensitivity quality inhering in a bearer by virtue of the bearer's exposure to radiation. quality PATO:0001806 sensitivity to irradiation PATO:0001806 A sensitivity quality inhering in a bearer by virtue of the bearer's exposure to radiation. PATOC:GVG A sensitivity to irradiation which is relatively low. low sensitivity to irradiation quality PATO:0001807 decreased sensitivity to irradiation PATO:0001807 A sensitivity to irradiation which is relatively low. PATOC:GVG A sensitivity to irradiation which is relatively high. high sensitivity to irradiation quality PATO:0001808 increased sensitivity to irradiation PATO:0001808 A sensitivity to irradiation which is relatively high. PATOC:GVG A pattern quality inhering in a bearer by virtue of the bearer's being compact or dense in arrangement. quality PATO:0001809 tight PATO:0001809 A pattern quality inhering in a bearer by virtue of the bearer's being compact or dense in arrangement. PATOC:GVG A grooved texture quality inhering in a bearer by virtue of the bearer's being marked by one or more creases in a normally smooth surface. quality PATO:0001810 wrinkled PATO:0001810 A grooved texture quality inhering in a bearer by virtue of the bearer's being marked by one or more creases in a normally smooth surface. url:http://www.thefreedictionary.com/wrinkled A relaxation which is relatively high. high relaxation quality PATO:0001811 GO has now relevant relation terms which should be used instead. obsolete increased relaxation true PATO:0001811 A relaxation which is relatively high. PATOC:GVG A relaxation which is relatively low. low relaxation quality PATO:0001812 GO has now relevant relation terms which should be used instead. obsolete decreased relaxation true PATO:0001812 A relaxation which is relatively low. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer's lack elastic tension that facilitate response to stimuli. quality PATO:0001813 atonicity PATO:0001813 A structural quality inhering in a bearer by virtue of the bearer's lack elastic tension that facilitate response to stimuli. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer's impaired elastic tension that facilitate response to stimuli. quality PATO:0001814 dystonicity PATO:0001814 A structural quality inhering in a bearer by virtue of the bearer's impaired elastic tension that facilitate response to stimuli. PATOC:GVG A strength quality inhering in a bearer by virtue of the bearer's disposition to lose strength. quality PATO:0001815 fatigability PATO:0001815 A strength quality inhering in a bearer by virtue of the bearer's disposition to lose strength. WordNet:WordNet A fatigability which is relatively high. high fatigability quality PATO:0001816 increased fatigability PATO:0001816 A fatigability which is relatively high. PATOC:GVG A fatigability which is relatively low. low fatigability quality PATO:0001817 decreased fatigability PATO:0001817 A fatigability which is relatively low. PATOC:GVG A quality of a single process inhering in a bearer by virtue of the bearer's increasing over time. quality PATO:0001818 progressive PATO:0001818 A quality of a single process inhering in a bearer by virtue of the bearer's increasing over time. PATOC:GVG A morphological quality inhering in a bearer by virtue of the bearer's absence or closure of a normal body orifice or tubular passage. atresia quality PATO:0001819 atretic PATO:0001819 A morphological quality inhering in a bearer by virtue of the bearer's absence or closure of a normal body orifice or tubular passage. answers.com:answers.com PATO:0001820 true A structural quality inhering in a bearer by virtue of the bearer's having no opening. unperforated quality PATO:0001821 imperforate PATO:0001821 A structural quality inhering in a bearer by virtue of the bearer's having no opening. thefreedictionary.com:thefreedictionary.com A quality inhering in a bearer by virtue of whether the bearer's being covered by a liquid. quality PATO:0001822 wetness PATO:0001822 A quality inhering in a bearer by virtue of whether the bearer's being covered by a liquid. wordreference.com:wordreference.com A wetness quality inhering in a bearer by virtue of the bearer's being covered by a liquid. quality PATO:0001823 wet PATO:0001823 A wetness quality inhering in a bearer by virtue of the bearer's being covered by a liquid. PATOC:GVG A wetness quality inhering in a bearer by virtue of the bearer's not being covered by a liquid. quality PATO:0001824 dry PATO:0001824 A wetness quality inhering in a bearer by virtue of the bearer's not being covered by a liquid. PATOC:GVG A wetness quality that is relatively high. quality PATO:0001825 increased wetness PATO:0001825 A wetness quality that is relatively high. PATOC:GVG A wetness quality that is relatively low. low wetness quality PATO:0001826 decreased wetness PATO:0001826 A wetness quality that is relatively low. PATOC:GVG A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of one sex and external sexual characteristics of the other sex. quality PATO:0001827 pseudohermaphrodite PATO:0001827 A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of one sex and external sexual characteristics of the other sex. WordNet:WordNet A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of male and external sexual characteristics of female. quality PATO:0001828 male pseudohermaphrodite PATO:0001828 A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of male and external sexual characteristics of female. PATOC:GVG A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of female and external sexual characteristics of male. quality PATO:0001829 female pseudohermaphrodite PATO:0001829 A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of female and external sexual characteristics of male. PATOC:GVG A female fertility which is relatively low. low female fertility quality PATO:0001830 decreased female fertility PATO:0001830 A female fertility which is relatively low. PATOC:GVG A female fertility which is relatively high. high female fertility quality PATO:0001831 increased female fertility PATO:0001831 A female fertility which is relatively high. PATOC:GVG A male fertility which is relatively high. high male fertility quality PATO:0001832 increased male fertility PATO:0001832 A male fertility which is relatively high. PATOC:GVG A male fertility which is relatively low. low male fertility quality PATO:0001833 decreased male fertility PATO:0001833 A male fertility which is relatively low. PATOC:GVG A fertility which is relatively low. low fertility quality PATO:0001834 decreased fertility PATO:0001834 A fertility which is relatively low. PATOC:GVG A fertility which is relatively high. high fertility quality PATO:0001835 increased fertility PATO:0001835 A fertility which is relatively high. PATOC:GVG A structural quality inhering in a bearer with some kind of aperture or opening that is blocked or clogged. quality PATO:0001836 congested PATO:0001836 A structural quality inhering in a bearer with some kind of aperture or opening that is blocked or clogged. answers.com:answers.com PATO:0001837 true A flow that is relatively low. low flow quality PATO:0001838 decreased fluid flow PATO:0001838 A flow that is relatively low. PATOC:GVG A fluid flow that is relatively high. high flow quality PATO:0001839 increased fluid flow PATO:0001839 A fluid flow that is relatively high. PATOC:GVG PATO:0001840 true An intensity which is characterized by temporary abatement in severity. quality PATO:0001841 remittent intensity PATO:0001841 An intensity which is characterized by temporary abatement in severity. answers.com:answers.com A concentration quality inhering in a bearer by virtue of the bearer's containing acid (hydrogen ions). pH quality PATO:0001842 acidity PATO:0001842 A concentration quality inhering in a bearer by virtue of the bearer's containing acid (hydrogen ions). biology-online:biology-online An acidity which is relatively low. low acidity quality PATO:0001843 decreased acidity PATO:0001843 An acidity which is relatively low. PATOC:GVG An acidity which is relatively high. high acidity quality PATO:0001844 increased acidity PATO:0001844 An acidity which is relatively high. PATOC:GVG A rhythm quality inhering in a bearer by virtue of the bearer's lacking rhythm lacking pattern. quality PATO:0001845 irregular rhythm PATO:0001845 A rhythm quality inhering in a bearer by virtue of the bearer's lacking rhythm lacking pattern. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer's being entwined and difficult to unravel. quality PATO:0001846 tangled PATO:0001846 A structural quality inhering in a bearer by virtue of the bearer's being entwined and difficult to unravel. answers.com:answers.com A structural quality inhering in a bearer by virtue of the bearer's being drawn together, compressed or squeezed physically. PATO:0001837 stenosis stenotic stricture quality PATO:0001847 constricted PATO:0001847 A structural quality inhering in a bearer by virtue of the bearer's being drawn together, compressed or squeezed physically. WordNet:WordNet A curvature quality inhering in a bearer by virtue of the bearer's being curved asymmetrically. quality PATO:0001848 asymmetrically curved PATO:0001848 A curvature quality inhering in a bearer by virtue of the bearer's being curved asymmetrically. PATOC:GVG A texture quality inhering in a bearer by virtue of a portion of the bearer's surface being scraped away. quality PATO:0001849 abrased PATO:0001849 A texture quality inhering in a bearer by virtue of a portion of the bearer's surface being scraped away. answers.com:answers.com A structural quality inhering in a bearer by virtue of the bearer's being fibrous tissue that replaces normal tissue destroyed by injury or disease. quality PATO:0001850 scarred PATO:0001850 A structural quality inhering in a bearer by virtue of the bearer's being fibrous tissue that replaces normal tissue destroyed by injury or disease. answers.com:answers.com A structure quality inhering in a bearer by virtue of the bearer's exhibiting transient abnormal enlargement, not due to cell proliferation. swelling quality PATO:0001851 swollen PATO:0001851 A structure quality inhering in a bearer by virtue of the bearer's exhibiting transient abnormal enlargement, not due to cell proliferation. thefreedictionary.com:thefreedictionary.com A positional quality inhering in a bearer by virtue of the bearer's being out of its usual or proper place, or position due to it being physically moved from the normal location. PATO:0001479 PATO:0002158 PATO:0002159 dislocation luxated luxation relational dislocated quality quality PATO:0001852 dislocated PATO:0001852 A positional quality inhering in a bearer by virtue of the bearer's being out of its usual or proper place, or position due to it being physically moved from the normal location. thefreedictionary.com:thefreedictionary.com A structural quality which is held by a bearer when the latter exhibits an excessive accumulation of cerebral spinal fluid. quality PATO:0001853 hydrocephalic PATO:0001853 A structural quality which is held by a bearer when the latter exhibits an excessive accumulation of cerebral spinal fluid. PATOC:mh A spatial pattern inhering in a bearer by virtue of the bearer's being situated at right angles to the horizon. quality PATO:0001854 vertical PATO:0001854 A spatial pattern inhering in a bearer by virtue of the bearer's being situated at right angles to the horizon. thefreedictionary.com:thefreedictionary.com A positional quality inhering in a bearer by virtue of the bearer's being in the plane of the horizon. quality PATO:0001855 horizontal PATO:0001855 A positional quality inhering in a bearer by virtue of the bearer's being in the plane of the horizon. thefreedictionary.com:thefreedictionary.com An oriented quality inhering in a bearer by virtue of the bearer's being turned inward upon itself. quality PATO:0001856 For example, a tubular organ or part. introverted PATO:0001856 An oriented quality inhering in a bearer by virtue of the bearer's being turned inward upon itself. die.net:die.net A shape quality in a bearer by virtue of the bearer's curving inward. quality PATO:0001857 concave PATO:0001857 A shape quality in a bearer by virtue of the bearer's curving inward. WordNet:WordNet A functionality quality inhering in a bearer by virtue of being not completely paralysed. quality PATO:0001858 partially paralysed PATO:0001858 A functionality quality inhering in a bearer by virtue of being not completely paralysed. PATOC:GVG A coordination which is relatively high. high coordination quality PATO:0001859 increased coordination PATO:0001859 A coordination which is relatively high. PATOC:GVG A coordination which is relatively low. low coordination quality PATO:0001860 decreased coordination PATO:0001860 A coordination which is relatively low. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer's forming a bundle of aligned anatomical fibers, as of muscle or nerve. fascicled quality PATO:0001861 fasciculated PATO:0001861 A structural quality inhering in a bearer by virtue of the bearer's forming a bundle of aligned anatomical fibers, as of muscle or nerve. answers.com:answers.com A fertility quality inhering in a bearer by virtue of the bearer's disposition to make its offspring sterile. quality grandchildless PATO:0001862 lack of fertility in offspring PATO:0001862 A fertility quality inhering in a bearer by virtue of the bearer's disposition to make its offspring sterile. PATOC:GVG A duration quality of a process inhering in a bearer by virtue of the bearer's having slow progressive course of indefinite duration. quality PATO:0001863 chronic PATO:0001863 A duration quality of a process inhering in a bearer by virtue of the bearer's having slow progressive course of indefinite duration. PATOC:cjm PATO:0001864 true A convex 3-D shape quality inhering in a bearer by virtue of the bearer's having a quadric surface in three dimensions obtained by rotating an ellipse about one of its principal axes. Includes spheres and oblate/prolate spheroids. PATO:0001864 quality sphericality PATO:0001865 spheroid PATO:0001865 A convex 3-D shape quality inhering in a bearer by virtue of the bearer's having a quadric surface in three dimensions obtained by rotating an ellipse about one of its principal axes. Includes spheres and oblate/prolate spheroids. Wikipedia:http://en.wikipedia.org/wiki/Spheroid A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting a polar diameter longer than its equatorial diameter. Image:http://upload.wikimedia.org/wikipedia/commons/8/88/ProlateSpheroid.png quality prolate spheroid PATO:0001866 prolate PATO:0001866 A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting a polar diameter longer than its equatorial diameter. Wikipedia:http://en.wikipedia.org/wiki/Prolate A shape quality inhering in a bearer by virtue of it being a quadrilateral polygon in which all four angles are right angles. Image:http://upload.wikimedia.org/wikipedia/en/e/ee/Shaperec.svg quality PATO:0001867 rectangular PATO:0001867 A shape quality inhering in a bearer by virtue of it being a quadrilateral polygon in which all four angles are right angles. Wikipedia:http://en.wikipedia.org/wiki/Rectangular A fluorescence quality inhering in a bearer by virtue of the bearer's exhibiting fluorescence which is self-induced. quality PATO:0001868 autofluorescence PATO:0001868 A fluorescence quality inhering in a bearer by virtue of the bearer's exhibiting fluorescence which is self-induced. PATOC:mb A quality inhering in a bearer by virtue of the bearer's being abnormal and having a destructive effect on living tissue. quality PATO:0001869 pathological PATO:0001869 A quality inhering in a bearer by virtue of the bearer's being abnormal and having a destructive effect on living tissue. PATOC:cjm A shape quality inhering in a circular disk by virtue of the bearer's having a segment of another circle removed from its edge, so that what remains is a shape enclosed by two circular arcs of different diameters which intersect at two points (usually in such a manner that the enclosed shape does not include the center of the original circle). Image:http://upload.wikimedia.org/wikipedia/commons/7/74/Crescent.svg crescentic quality bow-shaped lunate PATO:0001870 crescent-shaped PATO:0001870 A shape quality inhering in a circular disk by virtue of the bearer's having a segment of another circle removed from its edge, so that what remains is a shape enclosed by two circular arcs of different diameters which intersect at two points (usually in such a manner that the enclosed shape does not include the center of the original circle). Wikipedia:http://en.wikipedia.org/wiki/Crescent A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having the shape of a kidney. kidney-shaped quality bean shaped PATO:0001871 reniform PATO:0001871 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having the shape of a kidney. ISBN:0881923214 A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resemblance to a cube (a 3-D shape with a square cross section). cuboidal quality block-like PATO:0001872 cuboid PATO:0001872 A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resemblance to a cube (a 3-D shape with a square cross section). PATOC:MAH A convex 3-D shape quality inhering in a bearer by virtue of the bearer's exhibiting a consistently-sized round cross section. PATO:0001203 rod-like rod-shaped tubulate quality PATO:0001873 cylindrical PATO:0001873 A convex 3-D shape quality inhering in a bearer by virtue of the bearer's exhibiting a consistently-sized round cross section. PATOC:MAH A shape quality inhering in a bearer by virtue of the bearer's being cylindrical, in which the height is less than the diameter. disc-shaped disk-shaped quality PATO:0001874 discoid PATO:0001874 A shape quality inhering in a bearer by virtue of the bearer's being cylindrical, in which the height is less than the diameter. PATOC:cjm A shape quality inhering in a bearer by virtue of the bearer's having three angles. deltoid quality delta shaped triangle triangle-shaped PATO:0001875 triangular PATO:0001875 A shape quality inhering in a bearer by virtue of the bearer's having three angles. wordreference:wordreference A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having two parts, roughly spherical and of equal size, connected by a bar. quality PATO:0001876 dumbbell-shaped PATO:0001876 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having two parts, roughly spherical and of equal size, connected by a bar. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's being shaped like a lance-head, considerably longer than wide, tapering towards the tip from below the middle; attached at the broad end. spear-shaped quality PATO:0001877 lanceolate PATO:0001877 A shape quality inhering in a bearer by virtue of the bearer's being shaped like a lance-head, considerably longer than wide, tapering towards the tip from below the middle; attached at the broad end. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's consisting of two curves, in opposite directions. S-shaped. S-shaped sigmoidal quality PATO:0001878 sigmoid PATO:0001878 A shape quality inhering in a bearer by virtue of the bearer's consisting of two curves, in opposite directions. S-shaped. PATOC:CJM A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter U. horseshoe shaped horseshoe quality PATO:0001879 U-shaped PATO:0001879 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter U. WordNet:WordNet A quality inhering in a bearer by virtue of the bearer's having a tail or tail-like projection. caudal quality tailed PATO:0001880 caudate PATO:0001880 A quality inhering in a bearer by virtue of the bearer's having a tail or tail-like projection. PATOC:cjm A shape quality inhering in a bearer by virtue of the bearer's forming two equal obtuse triangles with a short side in common. sagittate quality PATO:0001881 Gradually enlarged at the base, like the head of an arrow. arrow-shaped PATO:0001881 A shape quality inhering in a bearer by virtue of the bearer's forming two equal obtuse triangles with a short side in common. ISBN:0881923214 RKC:RKC A concave 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a slug. quality PATO:0001882 limaciform PATO:0001882 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a slug. PATOC:CJM A concave 3-D shape quality inhering in a bearer by virtue of the bearer's gradually becoming thicker towards the end. PATO:0001797 club-like club-shaped clubbed quality PATO:0001883 clavate PATO:0001883 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's gradually becoming thicker towards the end. MP:0000576 A physical quality inhering in a bearer by virtue the bearer's disposition to being water-repellent; tending to repel and not absorb water. quality PATO:0001884 hydrophobicity PATO:0001884 A physical quality inhering in a bearer by virtue the bearer's disposition to being water-repellent; tending to repel and not absorb water. WordNet:WordNet A quality inhering in a bearer by virtue of the bearer's lacking affinity for water; tending to repel and not absorb water; tending not to dissolve in or mix with or be wetted by water. quality PATO:0001885 hydrophobic PATO:0001885 A quality inhering in a bearer by virtue of the bearer's lacking affinity for water; tending to repel and not absorb water; tending not to dissolve in or mix with or be wetted by water. WordNet:WordNet A physical quality inhering in a bearer by virtue the bearer's disposition to having an affinity for water; it is readily absorbing or dissolving in water. quality PATO:0001886 hydrophilicity PATO:0001886 A physical quality inhering in a bearer by virtue the bearer's disposition to having an affinity for water; it is readily absorbing or dissolving in water. answers.com:answers.com A quality inhering in a bearer by virtue of the bearer's disposition to having a strong affinity for water; tending to dissolve in, mix with, or be wetted by water. quality PATO:0001887 hydrophilic PATO:0001887 A quality inhering in a bearer by virtue of the bearer's disposition to having a strong affinity for water; tending to dissolve in, mix with, or be wetted by water. WordNet:WordNet A quality of a liquid inhering in a bearer by virtue of the bearer's ability to mix with (dissolve in) another liquid. quality PATO:0001888 miscibility PATO:0001888 A quality of a liquid inhering in a bearer by virtue of the bearer's ability to mix with (dissolve in) another liquid. Chemicool:Chemicool A surface feature shape quality inhering in a bearer by virtue of the bearer's having the border, edge, or outline cut into a series of segments of circles resembling a scallop-shell. crenate crenulate quality PATO:0001889 scalloped PATO:0001889 A surface feature shape quality inhering in a bearer by virtue of the bearer's having the border, edge, or outline cut into a series of segments of circles resembling a scallop-shell. Oxford:EnglishDictionary A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being divided into three branches. trifurcate quality PATO:0001890 tripartite PATO:0001890 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being divided into three branches. InfoVisual:InfoVisual A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting a continuous convex surface with an axis of symmetry and one axis longer than the other; egg-shaped. egg-shaped oval ovoid quality eccentric PATO:0001891 ovate PATO:0001891 A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting a continuous convex surface with an axis of symmetry and one axis longer than the other; egg-shaped. PATOC:mc An odor quality of having decreased odor. quality PATO:0001892 decreased odor PATO:0001892 An odor quality of having decreased odor. PATOC:GVG An odor quality of having increased odor. quality PATO:0001893 increased odor PATO:0001893 An odor quality of having increased odor. PATOC:GVG An organismal quality inhering in a bearer by virtue of the bearer's physical expression of sexual characteristics. quality PATO:0001894 phenotypic sex PATO:0001894 A biological sex quality inhering in an individual or a population that undergo sexual reproduction. quality PATO:0001895 mating type PATO:0001895 A biological sex quality inhering in an individual or a population that undergo sexual reproduction. wikipedia:wikipedia A structure quality inhering in a bearer by virtue of the bearer's lacking of a three dimensional space surrounded by one or more anatomical structures and containing one or more anatomical substances. quality PATO:0001896 unlumenized PATO:0001896 A structure quality inhering in a bearer by virtue of the bearer's lacking of a three dimensional space surrounded by one or more anatomical structures and containing one or more anatomical substances. PATOC:MAH A structure quality inhering in a bearer by virtue of the bearer's having a three dimensional space surrounded by one or more anatomical structures and containing one or more anatomical substances. quality PATO:0001897 See GO term: GO:0031974 membrane-enclosed lumen [DEF:"The enclosed volume within a sealed membrane or between two sealed membranes"]. lumenized PATO:0001897 A structure quality inhering in a bearer by virtue of the bearer's having a three dimensional space surrounded by one or more anatomical structures and containing one or more anatomical substances. PATOC:MAH A circumference which is relatively high. quality PATO:0001898 increased circumference PATO:0001898 A circumference which is relatively high. PATOC:GVG A circumference which is relatively low. quality PATO:0001899 decreased circumference PATO:0001899 A circumference which is relatively low. PATOC:GVG A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the south when it faces north. quality PATO:0001900 front PATO:0001900 A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the south when it faces north. PATOC:GVG A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the north when it faces south. quality PATO:0001901 back PATO:0001901 A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the north when it faces south. PATOC:GVG A directional quality inhering in a bearer by virtue of the bearer's having one direction only. quality PATO:0001902 unidirectional PATO:0001902 A directional quality inhering in a bearer by virtue of the bearer's having one direction only. PATOC:GVG A directional quality inhering in a bearer by virtue of the bearer's having two directions. quality PATO:0001903 bi-directional PATO:0001903 A directional quality inhering in a bearer by virtue of the bearer's having two directions. PATOC:GVG A directional quality inhering in a bearer by virtue of the bearer's direction approximating the shape of a circle. quality PATO:0001904 circling direction PATO:0001904 A directional quality inhering in a bearer by virtue of the bearer's direction approximating the shape of a circle. PATOC:GVG The bearer of this quality has_part = n, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. having physical part quality PATO:0001905 has normal numbers of parts of type PATO:0001905 The bearer of this quality has_part = n, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. PATOC:CJM A physical quality inhering in a bearer by virtue of the bearer's participation in movement. quality PATO:0001906 movement quality PATO:0001906 A physical quality inhering in a bearer by virtue of the bearer's participation in movement. PATOC:GVG A surface feature shape quality inhering in a bearer by virtue of the bearer's being like the surface of a compact mass of grapes. quality PATO:0001907 botryoidal PATO:0001907 A surface feature shape quality inhering in a bearer by virtue of the bearer's being like the surface of a compact mass of grapes. PATOC:cvs A nucleate quality inhering in a bearer by virtue of the bearer's having more than one nucleus. quality PATO:0001908 multinucleate PATO:0001908 A nucleate quality inhering in a bearer by virtue of the bearer's having more than one nucleus. PATOC:GVG A nucleate quality inhering in a bearer by virtue of the bearer's having three nuclei. quality PATO:0001909 trinucleate PATO:0001909 A nucleate quality inhering in a bearer by virtue of the bearer's having three nuclei. thefreedictionary:thefreedictionary A surface feature shape quality inhering in a bearer by virtue of the bearer's one part being layered over another connected part. quality PATO:0001910 folded PATO:0001910 A surface feature shape quality inhering in a bearer by virtue of the bearer's one part being layered over another connected part. PATOC:cjm A behavioral quality inhering in a bearer by virtue of the bearer's exhibiting movement in a circular course. quality PATO:0001911 circling PATO:0001911 A behavioral quality inhering in a bearer by virtue of the bearer's exhibiting movement in a circular course. PATOC:mb A quality of a single process inhering in a bearer by virtue of the state of bearer's mechanical, physical, and biochemical processes. quality PATO:0001912 physiological state PATO:0001912 A quality of a single process inhering in a bearer by virtue of the state of bearer's mechanical, physical, and biochemical processes. PATOC:mb A physiological state which is characterized by periods of high-frequency high amplitude electrical activity in neuronal tissue. quality PATO:0001913 ictal PATO:0001913 A physiological state which is characterized by periods of high-frequency high amplitude electrical activity in neuronal tissue. PATOC:mb A physiological state which is characterized by normal electrical activity in neuronal tissue. quality PATO:0001914 non-ictal PATO:0001914 A physiological state which is characterized by normal electrical activity in neuronal tissue. PATOC:mb A spatial quality inhering in a bearer by virtue of the bearer's being located toward the front and upper surface of an organism relative to another entity. quality PATO:0001915 anterodorsal to PATO:0001915 A spatial quality inhering in a bearer by virtue of the bearer's being located toward the front and upper surface of an organism relative to another entity. PATOC:wd A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and upper surface of an organism relative to another entity. quality PATO:0001916 posterodorsal to PATO:0001916 A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and upper surface of an organism relative to another entity. PATOC:wd A spatial quality inhering in a bearer by virtue of the bearer's being located toward the front and abdomen of an organism relative to another entity. quality PATO:0001917 anteroventral to PATO:0001917 A spatial quality inhering in a bearer by virtue of the bearer's being located toward the front and abdomen of an organism relative to another entity. PATOC:wd A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and abdomen of an organism relative to another entity. quality PATO:0001918 posteroventral to PATO:0001918 A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and abdomen of an organism relative to another entity. PATOC:wd A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the back or upper surface of an organism. quality PATO:0001919 mislocalised dorsally PATO:0001919 A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the back or upper surface of an organism. PATOC:mb A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the abdomen of an organism. quality PATO:0001920 mislocalised ventrally PATO:0001920 A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the abdomen of an organism. PATOC:mb A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the front of an organism. quality PATO:0001921 mislocalised anteriorly PATO:0001921 A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the front of an organism. PATOC:mb A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the rear of an organism. quality PATO:0001922 mislocalised posteriorly PATO:0001922 A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the rear of an organism. PATOC:mb A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the side of an organism. quality PATO:0001923 mislocalised laterally PATO:0001923 A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the side of an organism. PATOC:mb A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the middle of an organism. quality PATO:0001924 mislocalised medially PATO:0001924 A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the middle of an organism. PATOC:mb A surface shape quality inhering in a bearer by virtue of the bearer's shape of features present on its surface or outer shell. quality PATO:0001925 This quality either inheres directly in the surface, or in the entity that has the surface. For example, to say that a particular fly wing is curved is shorthand for saying the wing has a surface which is curved. surface feature shape PATO:0001925 A surface shape quality inhering in a bearer by virtue of the bearer's shape of features present on its surface or outer shell. PATOC:CJM A fluorescence which is higher than normal. high fluorescence quality PATO:0001926 increased fluorescence PATO:0001926 A fluorescence which is higher than normal. PATOC:GVG A fluorescence which is lower than normal. low fluorescence quality PATO:0001927 decreased fluorescence PATO:0001927 A fluorescence which is lower than normal. PATOC:GVG A texture quality inhering in a bearer by virtue of a local accumulation of fluid underneath the surface of the bearer. blistering quality PATO:0001928 blistered PATO:0001928 A texture quality inhering in a bearer by virtue of a local accumulation of fluid underneath the surface of the bearer. PATOC:GVG A variability quality inhering in a bearer by virtue of whether the bearer exhibits shape variation or change. quality PATO:0001929 variability of shape PATO:0001929 A variability quality inhering in a bearer by virtue of whether the bearer exhibits shape variation or change. PATOC:GVG A quality inhering in a bearer by virtue the bearer's having or exhibiting variation its shape. quality PATO:0001930 variant shape PATO:0001930 A quality inhering in a bearer by virtue the bearer's having or exhibiting variation its shape. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's lacking or not exhibiting variation of shape. quality PATO:0001931 invariant shape PATO:0001931 A quality inhering in a bearer by virtue of the bearer's lacking or not exhibiting variation of shape. PATOC:GVG A pattern quality inhering in a bearer by virtue of the bearer's being placed alternately one above the other. quality PATO:0001932 alternate placement PATO:0001932 A pattern quality inhering in a bearer by virtue of the bearer's being placed alternately one above the other. ISBN:0881923214 A positional quality inhering in a bearer by virtue of the bearer's being positioned on opposite sides on the same plane. quality PATO:0001933 opposite PATO:0001933 A positional quality inhering in a bearer by virtue of the bearer's being positioned on opposite sides on the same plane. ISBN:0881923214 A shape quality inhering in a bearer by virtue of the bearer's being perfectly circular. quality PATO:0001934 orbicular PATO:0001934 A shape quality inhering in a bearer by virtue of the bearer's being perfectly circular. ISBN:0881923214 A shape quality inhering in a bearer by virtue of the bearer's being roundish, a little inclining to be oblong. roundish quality PATO:0001935 obtuse PATO:0001935 A shape quality inhering in a bearer by virtue of the bearer's being roundish, a little inclining to be oblong. ISBN:0881923214 A spheroid quality inhering in a bearer by virtue of the bearer's being egg-shaped and flat, with the narrow end attached to the base. quality obovoid PATO:0001936 obovate PATO:0001936 A spheroid quality inhering in a bearer by virtue of the bearer's being egg-shaped and flat, with the narrow end attached to the base. wordreference:wordreference A shape quality inhering in a bearer by virtue of the bearer's being oblong, with the lower end very much attenuated. spathulate quality PATO:0001937 spatulate PATO:0001937 A shape quality inhering in a bearer by virtue of the bearer's being oblong, with the lower end very much attenuated. ISBN:0881923214 A spheroid quality inhering in a bearer by virtue of the bearer's being oval and a little angular in the middle. quality PATO:0001938 rhomboid PATO:0001938 A spheroid quality inhering in a bearer by virtue of the bearer's being oval and a little angular in the middle. ISBN:0881923214 PATO:0001939 true A size quality inhering in a bearer by virtue of the bearer's being many folds greater relative to the normal average. giant quality PATO:0001940 gigantic PATO:0001940 A size quality inhering in a bearer by virtue of the bearer's being many folds greater relative to the normal average. PATOC:UMH A color consisting of yellow and green hues. quality PATO:0001941 yellow green PATO:0001941 A color consisting of yellow and green hues. PATOC:GVG A color consisting of brown and green hues. olive green quality PATO:0001942 brown green PATO:0001942 A color consisting of brown and green hues. PATOC:GVG A purple color which has low saturation and low brightness. quality PATO:0001943 lilac PATO:0001943 A purple color which has low saturation and low brightness. PATOC:GVG A color consisting of yellow and orange hue. quality PATO:0001944 yellow orange PATO:0001944 A color consisting of yellow and orange hue. PATOC:GVG A moderate yellow-orange to orange color. quality PATO:0001945 ochre PATO:0001945 A moderate yellow-orange to orange color. wordreference:wordreference A color pattern inhering in a bearer by virtue of bearer's exhibiting transverse stripes of one hue or degree of saturation crossing another. striped quality PATO:0001946 banded PATO:0001946 A color pattern inhering in a bearer by virtue of bearer's exhibiting transverse stripes of one hue or degree of saturation crossing another. ISBN:0881923214 A color pattern inhering in a bearer by virtue of bearer's being covered with reticulated lines of a different hue or degree of saturation. net-like reticulated quality PATO:0001947 netted PATO:0001947 A color pattern inhering in a bearer by virtue of bearer's being covered with reticulated lines of a different hue or degree of saturation. ISBN:0881923214 A grooved texture quality inhering in a bearer by virtue of the bearer's being marked by two or more parallel channels. quality fluted PATO:0001948 furrowed PATO:0001948 A grooved texture quality inhering in a bearer by virtue of the bearer's being marked by two or more parallel channels. PATOC:JE A shape quality inhering in a bearer by virtue of the bearer's terminating abruptly in a little point. quality PATO:0001949 pointleted PATO:0001949 A shape quality inhering in a bearer by virtue of the bearer's terminating abruptly in a little point. ISBN:0881923214 A shape quality inhering in a bearer by virtue of the bearer's terminating gradually in a rounded end. quality PATO:0001950 blunt PATO:0001950 A shape quality inhering in a bearer by virtue of the bearer's terminating gradually in a rounded end. ISBN:0881923214 A spatial pattern inhering in a bearer by virtue of the bearer's being in opposition round a common axis. quality PATO:0001951 whorled PATO:0001951 A spatial pattern inhering in a bearer by virtue of the bearer's being in opposition round a common axis. ISBN:0881923214 A spatial quality inhering in a bearer by virtue of the bearer's being arranged in two opposite rows (and hence in the same plane). quality PATO:0001952 distichous PATO:0001952 A spatial quality inhering in a bearer by virtue of the bearer's being arranged in two opposite rows (and hence in the same plane). ISBN:0881923214 A pattern quality inhering in a bearer by virtue of the bearer's consisting of paired parts that alternately cross each other. crosscutting intercrossing intersecting quality PATO:0001953 decussate PATO:0001953 A pattern quality inhering in a bearer by virtue of the bearer's consisting of paired parts that alternately cross each other. ISBN:0881923214 A shape quality inhering in a bearer by virtue of the bearer's being linear, very narrow, tapering to a very fine point from a narrow base. awl-shaped needle-like quality PATO:0001954 subulate PATO:0001954 A shape quality inhering in a bearer by virtue of the bearer's being linear, very narrow, tapering to a very fine point from a narrow base. ISBN:0881923214 A shape quality inhering in a bearer by virtue of the bearer's being narrowly triangular, wider at the apex and tapering toward the base. wedge-shaped quality PATO:0001955 cuneate PATO:0001955 A shape quality inhering in a bearer by virtue of the bearer's being narrowly triangular, wider at the apex and tapering toward the base. wordreference:wordreference A variability quality inhering in a bearer by virtue of whether the bearer exhibits size variation or change. quality PATO:0001956 variability of size PATO:0001956 A variability quality inhering in a bearer by virtue of whether the bearer exhibits size variation or change. PATOC:GVG A variability of size which is relatively low. low variability of size quality PATO:0001957 decreased variability of size PATO:0001957 A variability of size which is relatively low. PATOC:GVG A variability of size which is relatively high. high variability of size quality PATO:0001958 increased variability of size PATO:0001958 A variability of size which is relatively high. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer's in which bundles of aligned anatomical fibers have become separated. quality PATO:0001959 defasciculated PATO:0001959 A structural quality inhering in a bearer by virtue of the bearer's in which bundles of aligned anatomical fibers have become separated. PATOC:mw A shape quality inhering in a bearer by virtue of the bearer's parts or projections being interlocked; for example, the fingers of two hands that are clasped. quality PATO:0001960 interdigitated PATO:0001960 A shape quality inhering in a bearer by virtue of the bearer's parts or projections being interlocked; for example, the fingers of two hands that are clasped. PATOC:wdahdul A structural quality inhering in a bearer by virtue of the bearer's touching another entity. quality contiguous PATO:0001961 in contact with PATO:0001961 A structural quality inhering in a bearer by virtue of the bearer's touching another entity. PATOC:wdahdul A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled inwards spirally on each side. quality PATO:0001962 involute PATO:0001962 A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled inwards spirally on each side. ISBN:0881923214 A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled backwards spirally on each side. quality PATO:0001963 revolute PATO:0001963 A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled backwards spirally on each side. ISBN:0881923214 A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled spirally downwards. quality PATO:0001964 circinate PATO:0001964 A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled spirally downwards. ISBN:0881923214 A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being bent down upon their stalk. quality PATO:0001965 reclinate PATO:0001965 A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being bent down upon their stalk. ISBN:0881923214 A curled quality inhering in a bearer by virtue of the bearer's one edge of its surface being wholly rolled up in another. quality PATO:0001966 convolute PATO:0001966 A curled quality inhering in a bearer by virtue of the bearer's one edge of its surface being wholly rolled up in another. ISBN:0881923214 A branched quality inhering in a bearer by virtue of the bearer's having three or more primary branches diverging radially from a single point. quality PATO:0001967 actinodromous PATO:0001967 A branched quality inhering in a bearer by virtue of the bearer's having three or more primary branches diverging radially from a single point. Hickey:1988 A branched quality inhering in a bearer by virtue of the bearer's having two or more parallel primary branches originate beside each other and converge apically. quality PATO:0001968 parallelodromous PATO:0001968 A branched quality inhering in a bearer by virtue of the bearer's having two or more parallel primary branches originate beside each other and converge apically. Hickey:1988 A branched quality inhering in a bearer by virtue of the bearer's having secondary branches terminating at the margin. quality PATO:0001969 craspedodromous PATO:0001969 A branched quality inhering in a bearer by virtue of the bearer's having secondary branches terminating at the margin. Hickey:1988 A branched quality inhering in a bearer by virtue of the bearer's having secondary branches joined together in a series of prominent arches. quality PATO:0001970 brochidodromous PATO:0001970 A branched quality inhering in a bearer by virtue of the bearer's having secondary branches joined together in a series of prominent arches. Hickey:1988 A branched quality inhering in a bearer by virtue of the bearer's having secondary branches freely branching toward the margin. quality PATO:0001971 cladodromous PATO:0001971 A branched quality inhering in a bearer by virtue of the bearer's having secondary branches freely branching toward the margin. Hickey:1988 A branched quality inhering in a bearer by virtue of the bearer's having secondary branches branching into a reticulum toward the margin. quality PATO:0001972 reticulodromous PATO:0001972 A branched quality inhering in a bearer by virtue of the bearer's having secondary branches branching into a reticulum toward the margin. Hickey:1988 A shape quality inhering in a bearer by virtue of the bearer's being tapering gradually into a rigid point. quality PATO:0001973 cuspidate PATO:0001973 A shape quality inhering in a bearer by virtue of the bearer's being tapering gradually into a rigid point. ISBN:0881923214 A shape quality inhering in a bearer by virtue of the bearer's terminating in a round end, the centre of which is depressed. quality PATO:0001974 retuse PATO:0001974 A shape quality inhering in a bearer by virtue of the bearer's terminating in a round end, the centre of which is depressed. ISBN:0881923214 A surface feature shape quality inhering in a bearer by virtue of the bearer's lacking sharp straight-edged teeth pointing to the apex. quality smooth PATO:0001975 unserrated PATO:0001975 A surface feature shape quality inhering in a bearer by virtue of the bearer's lacking sharp straight-edged teeth pointing to the apex. ISBN:0881923214 A surface feature shape quality inhering in a bearer by virtue of the bearer's having or lacking sharp straight-edged teeth pointing to the apex. quality PATO:0001976 serration PATO:0001976 A surface feature shape quality inhering in a bearer by virtue of the bearer's having or lacking sharp straight-edged teeth pointing to the apex. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's having at least one salient angle on the margin. angulate quality PATO:0001977 angular PATO:0001977 A shape quality inhering in a bearer by virtue of the bearer's having at least one salient angle on the margin. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's being regularly divided by deep incisions. incised quality PATO:0001978 cut PATO:0001978 A shape quality inhering in a bearer by virtue of the bearer's being regularly divided by deep incisions. ISBN:0881923214 A shape quality inhering in a bearer by virtue of the bearer's being partly divided into a determinate number of regions. quality PATO:0001979 lobed PATO:0001979 A shape quality inhering in a bearer by virtue of the bearer's being partly divided into a determinate number of regions. ISBN:0881923214 A shape quality inhering in a bearer by virtue of the bearer's having distinct parts arising from a common point or center. quality PATO:0001980 digitate PATO:0001980 A shape quality inhering in a bearer by virtue of the bearer's having distinct parts arising from a common point or center. thefreedictionary:thefreedictionary A shape quality inhering in a bearer by virtue of the bearer's having a shape resembling an ear. quality PATO:0001981 auriculate PATO:0001981 A shape quality inhering in a bearer by virtue of the bearer's having a shape resembling an ear. url:http://www.thefreedictionary.com/auriculate A shape quality inhering in a bearer by virtue of the bearer's gradually tapering to a slender point. quality PATO:0001982 attenuate PATO:0001982 A shape quality inhering in a bearer by virtue of the bearer's gradually tapering to a slender point. url:http://www.thefreedictionary.com/attenuate A structural quality inhering in a bearer by virtue of the bearer's two basal lobes being united together. quality PATO:0001983 perfoliate PATO:0001983 A structural quality inhering in a bearer by virtue of the bearer's two basal lobes being united together. ISBN:0881923214 A shape quality inhering in a bearer by virtue of the bearer's being prolonged below the point of insertion. quality PATO:0001984 decurrent PATO:0001984 A shape quality inhering in a bearer by virtue of the bearer's being prolonged below the point of insertion. ISBN:0881923214 A quality inhering in a bearer by virtue of the bearer's being kept below its freezing point. quality PATO:0001985 frozen PATO:0001985 A quality inhering in a bearer by virtue of the bearer's being kept below its freezing point. OBI:OBI A quality inhering in a bearer by virtue of the bearer's passing into solution. quality PATO:0001986 dissolved PATO:0001986 A quality inhering in a bearer by virtue of the bearer's passing into solution. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer's having a three dimensional cavity with a narrow or no opening, and often containing an anatomical substance. sacular quality PATO:0001987 saccular PATO:0001987 A structural quality inhering in a bearer by virtue of the bearer's having a three dimensional cavity with a narrow or no opening, and often containing an anatomical substance. PATOC:MAH A shape quality inhering in a bearer by virtue of the bearer's having four angles and four sides. quality PATO:0001988 quadrangular PATO:0001988 A shape quality inhering in a bearer by virtue of the bearer's having four angles and four sides. url:http://www.oed.com/ A curvature quality inhering in a bearer by virtue of the bearer's having many curves and turns. quality twisted PATO:0001989 sinuous PATO:0001989 A curvature quality inhering in a bearer by virtue of the bearer's having many curves and turns. PATOC:GVG A duration quality of a process inhering in a disease by virtue of the bearer's duration of an impairment of health or of a condition of abnormal functioning. quality PATO:0001990 MAH: I think this term should be obsoleted. Is it used? duration of disease PATO:0001990 A duration quality of a process inhering in a disease by virtue of the bearer's duration of an impairment of health or of a condition of abnormal functioning. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's disposition to being capable of indefinite growth or division. quality PATO:0001991 immortal PATO:0001991 A quality inhering in a bearer by virtue of the bearer's disposition to being capable of indefinite growth or division. answers.com:answers.com An organismal quality inhering in a bearer by virtue of the bearer's consisting cells. quality PATO:0001992 cellularity PATO:0001992 An organismal quality inhering in a bearer by virtue of the bearer's consisting cells. PATOC:GVG A cellularity quality inhering in a bearer by virtue of the bearer's consisting of more than one cell. quality PATO:0001993 multicellular PATO:0001993 A cellularity quality inhering in a bearer by virtue of the bearer's consisting of more than one cell. PATOC:GVG A cellularity quality inhering in a bearer by virtue of the bearer's consisting of exactly one cell. quality PATO:0001994 unicellular PATO:0001994 A cellularity quality inhering in a bearer by virtue of the bearer's consisting of exactly one cell. PATOC:GVG A quality that inheres in an entire organism or part of an organism. quality PATO:0001995 organismal quality PATO:0001995 A quality that inheres in an entire organism or part of an organism. PATOC:CJM PATO:0001996 true An amount which is relatively low. PATO:0000419 PATO:0000468 decreased number present in fewer numbers in organism quality decreased reduced subnumerary PATO:0001997 decreased amount PATO:0001997 An amount which is relatively low. PATOC:GVG A quality inhering in a bearer by virtue of its visibility. quality PATO:0001998 This term was created as a grouping term for the 2 terms "conspicuous" and "inconspicuous". However, it is not clear if these terms should even remain in PATO. conspicuousness PATO:0001998 A quality inhering in a bearer by virtue of its visibility. PATOC:MAH The bearer of this quality has_part < n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. Formally: If a bearer entity e has fewer parts of type X at time t, then the number of instances x of X at t such that x part_of e is < n, where n is either the normal number for comparable entities, or n is stated explicitly. This case includes the limit case, where the bearer lacks all parts of the specified type. loss of quality PATO:0001999 lacks parts or has fewer parts of type PATO:0001999 The bearer of this quality has_part < n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. Formally: If a bearer entity e has fewer parts of type X at time t, then the number of instances x of X at t such that x part_of e is < n, where n is either the normal number for comparable entities, or n is stated explicitly. This case includes the limit case, where the bearer lacks all parts of the specified type. PATOC:CJM A quality of physical entities inhering in a bearer by virtue of the bearer's lacking a physical part as specified by the additional entity. PATO:0001557 OBO_REL:lacks_part lacks all physical parts of type quality PATO:0002000 Example: [E=organism Q=lacks_all_parts_of_type E2=Wing] - applies to an organism. A relational quality in which the bearer entity has no parts of the specified type. The bearer of this quality has_part = 0 of the indicated entity type, where a comparable organism usually has at least 1 part of the same type. Note that the bearer of the quality is the whole, not the part. Formally: If a bearer entity e lacks all parts of type X at time t, then there exists no instances x of X at t such that x part_of e that has no wings, where wings are normally present in that organism type. In OWL this is equivalent to a restriction on the OBO_REL:has_part relation with cardinality=0, i.e has_part 0 E2. lacks all parts of type PATO:0002000 A quality of physical entities inhering in a bearer by virtue of the bearer's lacking a physical part as specified by the additional entity. PATOC:CJM The bearer of this quality has_part < n AND has_part > 0 of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. Formally: If a bearer entity e has fewer parts of type X at time t, then the number of instances x of X at t such that x part_of e is < n, where n is either the normal number for comparable entities, or n is stated explicitly. PATO:0001569 decreased number of has decreased number of has fewer physical parts of type quality PATO:0002001 Example: [E=hand Q=has_fewer_parts_of_type E2=digit] - applies to an organism that has no less fingers than is normal for organisms of that type. has fewer parts of type PATO:0002001 The bearer of this quality has_part < n AND has_part > 0 of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. Formally: If a bearer entity e has fewer parts of type X at time t, then the number of instances x of X at t such that x part_of e is < n, where n is either the normal number for comparable entities, or n is stated explicitly. PATOC:CJM The bearer of this quality has_part > n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. PATO:0001560 has extra parts of has increased number of having extra physical parts having supernumerary physical parts increased number of quality PATO:0002002 In polydactyly, the bearer of the quality is the hand, and the entity type being counted is 'finger'. In EQ syntax, E=hand, Q=<this> E2=finger. has extra parts of type PATO:0002002 The bearer of this quality has_part > n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. PATOC:CJM A quality that inheres in an entire population or part of a population. quality PATO:0002003 population quality PATO:0002003 A quality that inheres in an entire population or part of a population. PATOC:GVG A shape that inheres in a part of a surface. An object can have different surface shapes on different parts of its surface. quality PATO:0002004 Consider PATO:0001925 obsolete surface shape true PATO:0002004 A shape that inheres in a part of a surface. An object can have different surface shapes on different parts of its surface. PATOC:CJM Surface shape that refers to the inward or outward curvature of the surface. quality PATO:0002005 concavity PATO:0002005 Surface shape that refers to the inward or outward curvature of the surface. PATOC:MAH A shape that inheres in a 2 dimensional entity, such as a cross section or projection of a 3 dimensional entity. quality 2-D projection cross-sectional PATO:0002006 2-D shape PATO:0002006 A shape that inheres in a 2 dimensional entity, such as a cross section or projection of a 3 dimensional entity. PATOC:CJM A complete three dimensional shape in which for every line connecting pair of points on the object is within the object. Or: a shape lacking cavities. Contrast: concave. Image:http://upload.wikimedia.org/wikipedia/commons/0/06/Convex_polygon_illustration1.png quality PATO:0002007 Use this term or an is_a child of this term when the entire shape of the object is known. convex 3-D shape PATO:0002007 A complete three dimensional shape in which for every line connecting pair of points on the object is within the object. Or: a shape lacking cavities. Contrast: concave. PATOC:CJM A complete three dimensional shape in which there is a line connecting pair of points on the object that lies outside the object. Or: a shape with cavities. Contrast: concave. Image:http://en.wikipedia.org/wiki/Image:Convex_polygon_illustration2.png quality PATO:0002008 concave 3-D shape PATO:0002008 A complete three dimensional shape in which there is a line connecting pair of points on the object that lies outside the object. Or: a shape with cavities. Contrast: concave. PATOC:CJM A shape quality inhering in a bearer by virtue of the degree to which there are subdivisions or offshoots in a bearer entity. quality PATO:0002009 branchiness PATO:0002009 A shape quality inhering in a bearer by virtue of the degree to which there are subdivisions or offshoots in a bearer entity. PATOC:MAH A texture quality inhering in a bearer by virtue of the bearer's bing full of small openings or gaps. quality PATO:0002010 looseness PATO:0002010 A texture quality inhering in a bearer by virtue of the bearer's bing full of small openings or gaps. url:http://www.wordreference.com/definition/loose A structural quality which is held by a bearer when the latter's disposition the presence of abnormally proliferating masses of cells. tumorous quality PATO:0002011 neoplastic PATO:0002011 A structural quality which is held by a bearer when the latter's disposition the presence of abnormally proliferating masses of cells. PATOC:MAH A texture quality that exists through a liquid cover on the surface of the bearer. quality PATO:0002012 coating PATO:0002012 A texture quality that exists through a liquid cover on the surface of the bearer. Wikipedia:Wikipedia A structural quality inhering in a bearer by virtue of whether the bearer forms a bundle of anatomical fibers, as of muscle or nerve. quality PATO:0002013 fasciculation PATO:0002013 A structural quality inhering in a bearer by virtue of whether the bearer forms a bundle of anatomical fibers, as of muscle or nerve. answers.com:http://www.answers.com/ A structural quality that inheres in a bearer by virtue of the bearer's containing hollow areas. quality PATO:0002014 structure, cavities PATO:0002014 A structural quality that inheres in a bearer by virtue of the bearer's containing hollow areas. PATOC:GVG PATO:0002015 true quality PATO:0002016 magnitude PATO:0002016 high magnitude quality PATO:0002017 increased magnitude PATO:0002017 low magnitude quality PATO:0002018 decreased magnitude PATO:0002018 A growth quality of occurrent in which the growth of an organism, structure or group of organisms does not occur. agenesis quality PATO:0002019 aplastic growth PATO:0002019 A growth quality of occurrent in which the growth of an organism, structure or group of organisms does not occur. PATOC:MAH Pink color having high brightness and low saturation. quality PATO:0002020 pale pink PATO:0002020 Pink color having high brightness and low saturation. PATOC:GVG A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a cone (a 3-D shape with a round cross section that tapers). Image:http://upload.wikimedia.org/wikipedia/commons/d/d2/Cone_3d.png cone-shaped quality PATO:0002021 conical PATO:0002021 A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a cone (a 3-D shape with a round cross section that tapers). Wikipedia:http://en.wikipedia.org/wiki/Cone_(geometry) A concave 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a minute projection (villus). quality PATO:0002022 villiform PATO:0002022 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a minute projection (villus). PATOC:PEM A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along an apical-basal axis. quality PATO:0002023 apical-basal polarity PATO:0002023 A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along an apical-basal axis. PATOC:MAH A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along the anterior-posterior axis. rostral-caudal polarity superior-caudal polarity (human torso) quality PATO:0002024 anterior-posterior polarity PATO:0002024 A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along the anterior-posterior axis. PATOC:MAH A convex angle that is formed by one side of a polygon and a line extended from an adjacent side. quality PATO:0002025 external angle PATO:0002025 A convex angle that is formed by one side of a polygon and a line extended from an adjacent side. http://en.wikipedia.org/wiki/Internal_angle A quality of a single process inhering in a bearer by virtue of the bearer's not increasing over time. 2008-12-18T12:49:19Z quality PATO:0002026 non-progressive PATO:0002026 A quality of a single process inhering in a bearer by virtue of the bearer's not increasing over time. PATOC:GVG A concentration quality inhering in a bearer by virtue of the bearer's amount of osmoles of solute per kilogram of solvent. 2009-01-27T10:53:11Z quality PATO:0002027 osmolality PATO:0002027 A concentration quality inhering in a bearer by virtue of the bearer's amount of osmoles of solute per kilogram of solvent. Wikipedia:http://en.wikipedia.org/wiki/Osmolarity An osmolality which is relatively low. 2009-01-27T10:55:33Z low osmolality quality PATO:0002028 decreased osmolality PATO:0002028 An osmolality which is relatively low. PATOC:GVG An osmolality which is relatively high. 2009-01-27T10:56:19Z high osmolality quality PATO:0002029 increased osmolality PATO:0002029 An osmolality which is relatively high. PATOC:GVG A molecular quality that inheres in a molecular entity by virtue of whether the bearer exhibits the ability of a probe to react precisely with a specific target molecule. 2009-01-27T11:13:52Z quality PATO:0002030 specificity to PATO:0002030 A molecular quality that inheres in a molecular entity by virtue of whether the bearer exhibits the ability of a probe to react precisely with a specific target molecule. PATOC:mc A curvature quality inhering in a bearer by virtue of the bearer's being curved or tilted such that the tip points upwards. 2009-01-27T11:23:45Z quality PATO:0002031 upturned PATO:0002031 A curvature quality inhering in a bearer by virtue of the bearer's being curved or tilted such that the tip points upwards. PATOC:cjm A reflectivity quality inhering in light by virtue of the bearer's scattering occurring at small angle to the incident beam. 2009-01-27T11:38:49Z quality PATO:0002032 forward scatter PATO:0002032 A reflectivity quality inhering in light by virtue of the bearer's scattering occurring at small angle to the incident beam. PATOC:mc A reflective quality that is the light scattering occurring at wide angle (around 90 degrees) to the incident beam. 2009-01-27T11:39:36Z quality PATO:0002033 side scatter PATO:0002033 A reflective quality that is the light scattering occurring at wide angle (around 90 degrees) to the incident beam. PATOC:mc A shape quality inhering in a bearer by virtue of the bearer's being unseparated into parts or divisions. 2009-01-27T11:53:46Z quality unseparated PATO:0002034 undivided PATO:0002034 A shape quality inhering in a bearer by virtue of the bearer's being unseparated into parts or divisions. PATOC:GVG A spatial quality inhering in a bearer by virtue of the bearer's being on the same side in relation to another structure. 2009-02-01T02:04:11Z ipsilateral quality PATO:0002035 ipsilateral to PATO:0002035 A spatial quality inhering in a bearer by virtue of the bearer's being on the same side in relation to another structure. PATOC:GVG A spatial quality inhering in a bearer by virtue of the bearer's being located towards the central axis of the organism or an extremity. 2009-02-01T02:06:20Z quality PATO:0002036 axial to PATO:0002036 A spatial quality inhering in a bearer by virtue of the bearer's being located towards the central axis of the organism or an extremity. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer exhibiting deterioration of its structure. 2009-02-03T11:13:19Z quality PATO:0002037 degeneration PATO:0002037 A structural quality inhering in a bearer by virtue of the bearer exhibiting deterioration of its structure. PATOC:GVG A structural quality inhering in a bearer whose structure which does not deteriorate. 2009-02-03T11:14:54Z not degenerate quality PATO:0002038 non-degenerate PATO:0002038 A structural quality inhering in a bearer whose structure which does not deteriorate. PATOC:GVG A concave quality inhering in a bearer by virtue of the bearer's curving inward on both sides or surfaces. quality PATO:0002039 biconcave PATO:0002039 A concave quality inhering in a bearer by virtue of the bearer's curving inward on both sides or surfaces. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's being convex on both sides or surface. Image:http://www.thefreedictionary.com/_/viewer.aspx?path=hm&name=A4bicovx quality PATO:0002040 biconvex PATO:0002040 A shape quality inhering in a bearer by virtue of the bearer's being convex on both sides or surface. thefreedictionary:http://www.thefreedictionary.com/biconvexity A diameter that is along the anterior-posterior axis. quality PATO:0002041 anterior-posterior diameter PATO:0002041 A diameter that is along the anterior-posterior axis. PATOC:GVG An anterior-posterior diameter quality which is relatively small. low anterior-posterior diameter quality PATO:0002042 decreased anterior-posterior diameter PATO:0002042 An anterior-posterior diameter quality which is relatively small. PATOC:GVG An anterior-posterior diameter quality which is relatively large. high anterior-posterior diameter quality PATO:0002043 increased anterior-posterior diameter PATO:0002043 An anterior-posterior diameter quality which is relatively large. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's being a quadrilateral with two parallel sides. trapezoidal quality PATO:0002044 trapezoid PATO:0002044 A shape quality inhering in a bearer by virtue of the bearer's being a quadrilateral with two parallel sides. PATOC:GVG A branched quality inhering in a bearer by virtue of the bearer's having smaller branches arising from larger branches. Resembling a tree in branching structure. 2009-02-15T08:11:41Z dendriform dendroid dendroidal quality PATO:0002045 dendritic PATO:0002045 A branched quality inhering in a bearer by virtue of the bearer's having smaller branches arising from larger branches. Resembling a tree in branching structure. PATOC:cvs A spatial quality inhering in a bearer by virtue of the bearer's being away from or on the opposite side of the central axis. 2009-03-03T04:16:11Z quality PATO:0002046 abaxial to PATO:0002046 A spatial quality inhering in a bearer by virtue of the bearer's being away from or on the opposite side of the central axis. medical-dictionary:http://medical-dictionary.thefreedictionary.com/abaxial A spatial quality inhering in a bearer by virtue of the bearer's being located on the side nearest to the axis of an organ or organism. 2009-03-03T04:22:28Z quality PATO:0002047 adaxial to PATO:0002047 A spatial quality inhering in a bearer by virtue of the bearer's being located on the side nearest to the axis of an organ or organism. thefreedictionary:http://www.thefreedictionary.com/adaxial An organismal quality inhering in a bearer by virtue of the bearer's having two or more cell populations that differ in genetic makeup. This situation can affect any type of cell, including blood cells, gametes (egg and sperm cells), and skin. 2009-03-03T04:30:52Z quality heterogeneity PATO:0002048 mosaicism PATO:0002048 An organismal quality inhering in a bearer by virtue of the bearer's having two or more cell populations that differ in genetic makeup. This situation can affect any type of cell, including blood cells, gametes (egg and sperm cells), and skin. Medline:http://www.nlm.nih.gov/medlineplus A curvature quality inhering in a bearer by virtue of the bearer's being curved around an axis and towards the side. 2009-03-13T12:36:14Z quality PATO:0002049 lateral and rotional curvature PATO:0002049 A curvature quality inhering in a bearer by virtue of the bearer's being curved around an axis and towards the side. PATOC:GVG An amount which normal. 2009-03-20T11:16:22Z present in normal numbers in organism quality PATO:0002050 normal amount PATO:0002050 An amount which normal. PATOC:GVG An occurrence which is relatively high. 2009-03-26T11:10:11Z increased incidence quality PATO:0002051 increased occurrence PATO:0002051 An occurrence which is relatively high. PATOC:GVG An occurrence which is relatively low. 2009-03-26T11:12:35Z decreased incidence quality PATO:0002052 decreased occurrence PATO:0002052 An occurrence which is relatively low. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's being flattened along dorso-ventral axis. 2009-03-26T03:02:38Z quality PATO:0002053 dorso-ventrally flattened PATO:0002053 A quality inhering in a bearer by virtue of the bearer's being flattened along dorso-ventral axis. PATOC:MSP A quality inhering in a bearer by virtue of the bearer's being flattened along transverse axis. 2009-03-26T03:03:37Z laterally flattened quality transversely flattened PATO:0002054 laterally compressed PATO:0002054 A quality inhering in a bearer by virtue of the bearer's being flattened along transverse axis. PATOC:msp A fragility which is relatively high. 2009-03-26T04:01:37Z quality PATO:0002055 increased fragility PATO:0002055 A fragility which is relatively high. PATOC:GVG A fragility which is relatively low. 2009-03-26T04:02:14Z quality PATO:0002056 decreased fragility PATO:0002056 A fragility which is relatively low. PATOC:GVG An area which is relatively high. 2009-03-30T04:11:43Z quality PATO:0002057 increased area PATO:0002057 An area which is relatively high. PATOC:GVG An area which is relatively low. 2009-03-30T04:12:11Z quality PATO:0002058 decreased area PATO:0002058 An area which is relatively low. PATOC:GVG The specific wavelength of light emitted by a fluorescent molecule, such as a labelled probe, upon absorption of light at the (higher) excitation wavelength. 2009-05-27T02:25:33Z quality PATO:0002059 emmision wavelength PATO:0002059 The specific wavelength of light emitted by a fluorescent molecule, such as a labelled probe, upon absorption of light at the (higher) excitation wavelength. web:http://www.expertglossary.com/ The specific wavelength of radiation that can be retained by a bearer. 2009-05-27T02:33:32Z quality PATO:0002060 absorption wavelength PATO:0002060 The specific wavelength of radiation that can be retained by a bearer. PATOC:GVG PATO:0002061 true 2009-06-05T09:16:46Z quality PATO:0002062 physical quality of a process PATO:0002062 A shape inhering in a bearer by virtue of the bearer's being elongated and cylindrical. 2009-07-01T01:44:06Z quality PATO:0002063 columnar PATO:0002063 A shape inhering in a bearer by virtue of the bearer's being elongated and cylindrical. PATOC:me A structure quality inhering in a bearer by virtue of the bearer's delimited by a surface with holes. 2009-07-01T01:46:53Z quality PATO:0002064 fenestrated PATO:0002064 A structure quality inhering in a bearer by virtue of the bearer's delimited by a surface with holes. PATOC:me A shape quality inhering in a bearer by virtue of the bearer's being arranged like rays or radii; radiating from a common center. 2009-07-01T01:48:19Z stellate quality PATO:0002065 star shaped PATO:0002065 A shape quality inhering in a bearer by virtue of the bearer's being arranged like rays or radii; radiating from a common center. PATOC:me A solid configuration inhering in a material entity by virtue of its constituent atoms, molecules, or ions being arranged in an orderly repeating pattern extending in all three spatial dimensions. 2009-07-01T01:50:40Z quality PATO:0002066 crystal configuration PATO:0002066 A solid configuration inhering in a material entity by virtue of its constituent atoms, molecules, or ions being arranged in an orderly repeating pattern extending in all three spatial dimensions. Wikipedia:http://en.wikipedia.org/wiki/Crystal A spatial pattern inhering in a bearer by virtue of the bearer's layered configuration. 2009-07-01T02:30:45Z quality PATO:0002067 stratification PATO:0002067 A spatial pattern inhering in a bearer by virtue of the bearer's layered configuration. PATOC:GVG A spatial pattern inhering in a bearer by virtue of the bearer's exhibiting a layered configuration. 2009-07-01T02:31:53Z quality PATO:0002068 stratified PATO:0002068 A spatial pattern inhering in a bearer by virtue of the bearer's exhibiting a layered configuration. PATOC:GVG A spatial pattern inhering in a bearer by virtue of the bearer's lacking a layered configuration. 2009-07-01T02:33:41Z quality PATO:0002069 unstratified PATO:0002069 A spatial pattern inhering in a bearer by virtue of the bearer's lacking a layered configuration. PATOC:GVG A molecular quality that arises from the molecular attraction exerted between two atoms or compounds. 2009-09-18T01:16:16Z quality PATO:0002070 affinity PATO:0002070 A molecular quality that arises from the molecular attraction exerted between two atoms or compounds. PATOC:GVG An affinity which is relatively high. 2009-09-18T01:29:42Z quality PATO:0002071 increased affinity PATO:0002071 An affinity which is relatively high. PATOC:GVG An affinity which is relatively low. 2009-09-18T01:30:11Z quality PATO:0002072 decreased affinity PATO:0002072 An affinity which is relatively low. PATOC:GVG A molecular quality that arises from the synergistic strength of bond affinities between multiple bond interactions. 2009-09-18T01:41:44Z quality PATO:0002073 avidity PATO:0002073 A molecular quality that arises from the synergistic strength of bond affinities between multiple bond interactions. Wikipedia:Wikipedia An avidity which is relatively high. 2009-09-18T01:45:56Z quality PATO:0002074 increased avidity PATO:0002074 An avidity which is relatively high. PATOC:GVG An avidity which is relatively low. 2009-09-18T01:45:59Z quality PATO:0002075 decreased avidity PATO:0002075 An avidity which is relatively low. PATOC:GVG A behavioral quality inhering in a bearer by virtue of the bearer's movement. 2009-09-18T02:04:48Z movement behavioural quality quality PATO:0002076 movement behavioral quality PATO:0002076 A behavioral quality inhering in a bearer by virtue of the bearer's movement. PATOC:GVG A spatial quality inhering in a bearer by virtue of the bearer's being positioned with multiple entities of the same type above and below. 2009-09-18T02:11:35Z quality PATO:0002077 stacked PATO:0002077 A spatial quality inhering in a bearer by virtue of the bearer's being positioned with multiple entities of the same type above and below. PATOC:CJM A quality inhering in a bearer by virtue of the bearer's having an empty space or cavity within. 2009-09-18T02:19:20Z quality PATO:0002078 hollow PATO:0002078 A quality inhering in a bearer by virtue of the bearer's having an empty space or cavity within. url:http://www.merriam-webster.com/dictionary/hollow PATO:0002079 true A broken quality inhering in a bearer by virtue of the bearer's being separated into two contiguous wholes. 2009-09-21T10:18:11Z quality PATO:0002080 broken into two pieces PATO:0002080 A broken quality inhering in a bearer by virtue of the bearer's being separated into two contiguous wholes. PATOC:CJM A broken quality inhering in a bearer by virtue of the bearer's being broken into multiple contiguous wholes. 2009-09-21T10:18:51Z quality PATO:0002081 shattered PATO:0002081 A broken quality inhering in a bearer by virtue of the bearer's being broken into multiple contiguous wholes. PATOC:GJM A broken quality inhering in a bearer by virtue of the bearer's being still one contiguous whole but structurally damaged such that in danger of become two or more. 2009-09-21T10:20:06Z quality PATO:0002082 partially broken PATO:0002082 A broken quality inhering in a bearer by virtue of the bearer's being still one contiguous whole but structurally damaged such that in danger of become two or more. PATOC:CJM Having extra or fewer parts. 2009-09-21T10:41:58Z quality PATO:0002083 altered number of PATO:0002083 Having extra or fewer parts. PATOC:GVG The period after death of the organism. 2009-09-25T11:29:21Z quality PATO:0002084 Terms were requested by the OBI consortium but it was later decided that the term was not reflecting a quality rather what it might be refered to as a "conferred quality". obsolete post-mortem true PATO:0002084 The period after death of the organism. thefreedictionary:thefreedictionary The period before death of the organism. 2009-09-25T11:31:13Z quality PATO:0002085 Terms were requested by the OBI consortium but it was later decided that the term was not reflecting a quality rather what it might be refered to as a "conferred quality". obsolete pre-mortem true PATO:0002085 The period before death of the organism. merriam-webster:merriam-webster PATO:0002086 true A quality inhering in a bearer by virtue of the bearer's being short and wide and tapered distally. 2009-09-30T09:53:43Z quality PATO:0002087 bullet-shaped PATO:0002087 A quality inhering in a bearer by virtue of the bearer's being short and wide and tapered distally. PATOC:GVG A structure quality inhering in a bearer by virtue of the bearer's body containing one cyst - a formation of a sac-like closed membranous structure not associated with neoplasia. 2009-10-01T03:00:20Z quality PATO:0002088 monocystic PATO:0002088 A structure quality inhering in a bearer by virtue of the bearer's body containing one cyst - a formation of a sac-like closed membranous structure not associated with neoplasia. mondofacto:mondofacto A structure quality inhering in a bearer by virtue of the bearer's body containing more than one cyst - formations of sac-like closed membranous structures not associated with neoplasia. 2009-10-01T03:02:54Z multicystic quality PATO:0002089 polycystic PATO:0002089 A structure quality inhering in a bearer by virtue of the bearer's body containing more than one cyst - formations of sac-like closed membranous structures not associated with neoplasia. PATOC:GVG A morphology quality inhering in a tumour by virtue of the bearer's exhibiting the morphological characteristics of a glandular epithelial cell. 2009-10-05T11:25:52Z quality PATO:0002090 adenomatous PATO:0002090 A morphology quality inhering in a tumour by virtue of the bearer's exhibiting the morphological characteristics of a glandular epithelial cell. PATOC:GVG A quality of a single process inhering in a bearer by virtue of the bearer's having an onset and time course between acute and chronic. 2009-10-05T11:31:35Z quality PATO:0002091 subacute PATO:0002091 A quality of a single process inhering in a bearer by virtue of the bearer's having an onset and time course between acute and chronic. PATOC:GVG A morphology quality inhering in a neoplastic cell by virtue of the bearer's exhibiting breakdown of cell-cell interaction maintaining tissue architecture, proliferative dysregulation and bizarre modification to nucleus size and shape. 2009-10-05T11:45:53Z quality PATO:0002092 anaplastic PATO:0002092 A morphology quality inhering in a neoplastic cell by virtue of the bearer's exhibiting breakdown of cell-cell interaction maintaining tissue architecture, proliferative dysregulation and bizarre modification to nucleus size and shape. PATOC:GVG A volume quality inhering in a degenerating cell by virtue of the bearer's exhibiting an increase in volume associated with cytoplasmic abnormalities. 2009-10-05T12:01:13Z quality PATO:0002093 ballooning PATO:0002093 A volume quality inhering in a degenerating cell by virtue of the bearer's exhibiting an increase in volume associated with cytoplasmic abnormalities. PATOC:GVG An affinity inhering in an anatomical structure by virtue of the bearer exhibiting a molecular interaction for basic dyes under specific pH conditions. 2009-10-05T12:05:23Z quality PATO:0002094 basophilic PATO:0002094 An affinity inhering in an anatomical structure by virtue of the bearer exhibiting a molecular interaction for basic dyes under specific pH conditions. PATOC:GVG A disposition inhering in a tumour to progress or fail to progress during it's life time. 2009-10-05T12:15:02Z quality PATO:0002095 obsolete neoplasm disposition true PATO:0002095 A disposition inhering in a tumour to progress or fail to progress during it's life time. PATOC:GVG A disposition inhering in a tumour by virtue of the bearer's disposition not to progress, invade surrounding tissues or metastasize. 2009-10-05T12:47:14Z quality benign PATO:0002096 neoplastic, non-malignant PATO:0002096 A disposition inhering in a tumour by virtue of the bearer's disposition not to progress, invade surrounding tissues or metastasize. PATOC:GVG A disposition inhering in a tumour by virtue of the bearer's disposition to progress, invade surrounding tissues or metastasize. 2009-10-05T12:50:22Z quality PATO:0002097 neoplastic, malignant PATO:0002097 A disposition inhering in a tumour by virtue of the bearer's disposition to progress, invade surrounding tissues or metastasize. PATOC:GVG A disposition inhering in a tumour by virtue of the bearer's disposition to spread and invade distant tissues. 2009-10-05T12:54:48Z quality PATO:0002098 neoplastic, metastatic PATO:0002098 A disposition inhering in a tumour by virtue of the bearer's disposition to spread and invade distant tissues. PATOC:GVG A cellular quality inhering in a bearer by virtue of its stable specialization to a particular cell type. 2009-10-05T12:58:54Z quality PATO:0002099 differentiated PATO:0002099 A cellular quality inhering in a bearer by virtue of its stable specialization to a particular cell type. PATOC:GVG A cellular quality inhering in a bearer by virtue of having not yet acquired a special structure of function. 2009-10-05T12:59:21Z quality PATO:0002100 undifferentiated PATO:0002100 A cellular quality inhering in a bearer by virtue of having not yet acquired a special structure of function. PATOC:GVG A cellular quality inhering in a bearer by virtue of having changed from one fully differentiated state into another. 2009-10-05T01:09:09Z quality trans-differentiated PATO:0002101 metaplastic PATO:0002101 A cellular quality inhering in a bearer by virtue of having changed from one fully differentiated state into another. PATOC:GVG A cellular quality inhering in a cell that arises by virtue of whether the bearer exhibits the ability to grow and proliferate in number through cell division. 2009-10-05T01:16:31Z quality PATO:0002102 proliferative PATO:0002102 A cellular quality inhering in a cell that arises by virtue of whether the bearer exhibits the ability to grow and proliferate in number through cell division. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer's penetrating or permeating another substance or area. 2009-10-05T01:27:56Z infiltrating quality PATO:0002103 infiltrative PATO:0002103 A structural quality inhering in a bearer by virtue of the bearer's penetrating or permeating another substance or area. PATOC:GVG A compositional quality inhering in an bearer by virtue of the bearer's infiltration by leukocytes, local edema and accumulation of plasma proteins. 2009-10-05T01:37:35Z quality PATO:0002104 inflamed PATO:0002104 A compositional quality inhering in an bearer by virtue of the bearer's infiltration by leukocytes, local edema and accumulation of plasma proteins. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer's exhibiting excessive discharge of blood from the blood vessels. 2009-10-05T01:55:53Z quality PATO:0002105 hemorrhagic PATO:0002105 A structural quality inhering in a bearer by virtue of the bearer's exhibiting excessive discharge of blood from the blood vessels. PATOC:GVG A cellular quality inhering in a bearer by virtue of its lacking most of the cellular characteristics which would allow it to be fully differentiated. 2009-10-05T02:53:43Z quality PATO:0002106 poorly differentiated PATO:0002106 A cellular quality inhering in a bearer by virtue of its lacking most of the cellular characteristics which would allow it to be fully differentiated. PATOC:GVG A positional quality inhering in a bearer by virtue of the bearer's being at the edge or boundary of a related entity. 2009-10-05T02:58:16Z quality PATO:0002107 peripheral PATO:0002107 A positional quality inhering in a bearer by virtue of the bearer's being at the edge or boundary of a related entity. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's resembling small nipple like projection. 2009-10-05T03:04:52Z quality PATO:0002108 papillary PATO:0002108 A quality inhering in a bearer by virtue of the bearer's resembling small nipple like projection. PATO:GVG A structural quality inhering in a bearer by virtue of the bearer's resembling cheese. 2009-10-05T03:09:27Z cheese-like quality PATO:0002109 caseous PATO:0002109 A structural quality inhering in a bearer by virtue of the bearer's resembling cheese. answers.com:answers.com A cellular quality inhering in a bearer by virtue of its having most of the cellular characteristics of the tissue of origin. 2009-10-05T03:26:29Z quality PATO:0002110 well differentiated PATO:0002110 A cellular quality inhering in a bearer by virtue of its having most of the cellular characteristics of the tissue of origin. PATOC:GVG A cellular quality inhering in a bearer by virtue of its lacking few of the cellular characteristics which would allow it to be fully differentiated. 2009-10-05T03:29:42Z quality PATO:0002111 moderately well differentiated PATO:0002111 A cellular quality inhering in a bearer by virtue of its lacking few of the cellular characteristics which would allow it to be fully differentiated. PATOC:GVG A structural quality inhering in a bearer by virtue of the bearer's having a hole or holes, especially a row or array of small holes. 2009-10-05T03:37:05Z PATO:0000649 quality permeable pierced PATO:0002112 perforate PATO:0002112 A structural quality inhering in a bearer by virtue of the bearer's having a hole or holes, especially a row or array of small holes. answers.com:answers.com Perforated like a sieve. 2009-10-05T03:38:22Z quality PATO:0002113 cribriform PATO:0002113 Perforated like a sieve. merriam-webster:merriam-webster A composition quality inhering in a bearer by virtue of the bearer's containing excess lipid. 2009-10-05T03:47:15Z quality PATO:0002114 fatty PATO:0002114 A composition quality inhering in a bearer by virtue of the bearer's containing excess lipid. PATOC:GVG A composition quality inhering in a bearer by virtue of the bearer's containing fibrin. 2009-10-05T04:01:01Z quality PATO:0002115 fibrinoid PATO:0002115 A composition quality inhering in a bearer by virtue of the bearer's containing fibrin. PATOC:GVG A composition quality inhering in exudate by virtue of the bearer's containing fibrin. 2009-10-05T04:03:03Z quality PATO:0002116 fibrinopurulent PATO:0002116 A composition quality inhering in exudate by virtue of the bearer's containing fibrin. PATOC:GVG A morphology quality inhering in a bearer by virtue of the bearer's exhbiting the morphological characteristics of a gland. 2009-10-05T04:11:30Z quality PATO:0002117 glandular PATO:0002117 A morphology quality inhering in a bearer by virtue of the bearer's exhbiting the morphological characteristics of a gland. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's being present in more than two copies. 2009-10-06T03:28:38Z quality PATO:0002118 multiple PATO:0002118 A quality inhering in a bearer by virtue of the bearer's being present in more than two copies. PATOC:GVG A structural quality which is held by a bearer when the latter exhibits an excessive accumulation of intracellular fluid. 2009-10-06T03:45:58Z quality PATO:0002119 hydropic PATO:0002119 A structural quality which is held by a bearer when the latter exhibits an excessive accumulation of intracellular fluid. PATOC:GVG A quality inhering a bearer by virtue of the bearer's ability to generate pus. 2009-10-06T03:56:00Z quality purulent PATO:0002120 suppurative PATO:0002120 A quality inhering a bearer by virtue of the bearer's ability to generate pus. PATOC:GVG A spatial pattern inhering in a bearer by virtue of the bearer's structure resembling an irregular meshwork with cross-linking struts. 2009-10-06T03:57:55Z quality PATO:0002121 trabecular PATO:0002121 A spatial pattern inhering in a bearer by virtue of the bearer's structure resembling an irregular meshwork with cross-linking struts. PATOC:GVG A composition quality inhering in a bearer by virtue of the bearer's being composed of more than one identifiable entities. 2009-10-06T04:29:17Z quality PATO:0002122 mixed PATO:0002122 A composition quality inhering in a bearer by virtue of the bearer's being composed of more than one identifiable entities. PATOC:GVG Being smallest in amount, extent or degree. 2009-10-06T04:33:48Z quality PATO:0002123 minimal PATO:0002123 Being smallest in amount, extent or degree. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's processing the form of a thin plate sheet or layer. 2009-10-06T04:37:14Z quality PATO:0002124 laminar PATO:0002124 A quality inhering in a bearer by virtue of the bearer's processing the form of a thin plate sheet or layer. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's consisting a knot-like mass. 2009-10-06T04:40:06Z quality PATO:0002125 nodular PATO:0002125 A quality inhering in a bearer by virtue of the bearer's consisting a knot-like mass. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's containing bone. 2009-10-06T04:42:11Z bony quality PATO:0002126 osseous PATO:0002126 A quality inhering in a bearer by virtue of the bearer's containing bone. PATOC:GVG A hardness quality of being rigid and resistant to pressure and fibrous. 2009-10-06T04:49:30Z quality PATO:0002127 scirrhous PATO:0002127 A hardness quality of being rigid and resistant to pressure and fibrous. PATOC:GVG A quality inhering a bearer by virtue of the bearer's containing or resembling serum. 2009-10-06T04:51:16Z quality PATO:0002128 serous PATO:0002128 A quality inhering a bearer by virtue of the bearer's containing or resembling serum. PATOC:GVG A disposition inhering in a tumour by virtue of the bearer's disposition to invade surrounding tissues. 2009-10-06T05:02:45Z quality PATO:0002129 neoplastic, invasive PATO:0002129 A disposition inhering in a tumour by virtue of the bearer's disposition to invade surrounding tissues. PATOC:GVG A disposition inhering in a tumour by virtue of the bearer's disposition to invade surrounding tissues to a large extend. 2009-10-06T05:03:13Z quality PATO:0002130 neoplastic, deeply invasive PATO:0002130 A disposition inhering in a tumour by virtue of the bearer's disposition to invade surrounding tissues to a large extend. PATOC:GVG A displaced angular placement quality inhering in a body part by virtue of the bearer's movement away from the medial plane of the body. 2009-10-13T06:38:53Z quality PATO:0002131 abduction PATO:0002131 A displaced angular placement quality inhering in a body part by virtue of the bearer's movement away from the medial plane of the body. wikipedia:wikipedia A disposition inhering in a tumour by virtue of the bearer's disposition not to invade surrounding tissues. 2009-10-06T05:04:18Z quality PATO:0002132 neoplastic, non-invasive PATO:0002132 A disposition inhering in a tumour by virtue of the bearer's disposition not to invade surrounding tissues. PATOC:GVG A displaced angular placement quality inhering in a body part by virtue of the bearer's movement closer the medial plane of the body. 2009-10-13T06:41:39Z quality PATO:0002133 This term is also used in reference to the operation of the muscle in anatomy or musculature. adduction PATO:0002133 A displaced angular placement quality inhering in a body part by virtue of the bearer's movement closer the medial plane of the body. wikipedia:wikipedia A composition quaity inhering in a bearer by virtue of the bearer's containing of or pertaining to fibrils, or nanoscale fibers. 2009-10-26T12:53:47Z fibrillate quality PATO:0002134 fibrillary PATO:0002134 A composition quaity inhering in a bearer by virtue of the bearer's containing of or pertaining to fibrils, or nanoscale fibers. wikipedia:wikipedia A duration quality of a process inhering in a bearer by virtue of the bearer's delay to complete the closure of the opening of an anatomical entity. 2009-10-26T01:03:17Z quality PATO:0002135 delayed closure PATO:0002135 A duration quality of a process inhering in a bearer by virtue of the bearer's delay to complete the closure of the opening of an anatomical entity. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's relative inability of electromagnetism to pass through a particular material, particularly X-rays. 2009-10-26T01:14:38Z quality PATO:0002136 radiopacity PATO:0002136 A quality inhering in a bearer by virtue of the bearer's relative inability of electromagnetism to pass through a particular material, particularly X-rays. Wikipedia:Wikipedia A radiopacity quality inhering in a bearer by virtue of the bearer's prevention of the passage of electromagnetic radiation. 2009-10-26T01:16:08Z quality PATO:0002137 radiopaque PATO:0002137 A radiopacity quality inhering in a bearer by virtue of the bearer's prevention of the passage of electromagnetic radiation. Wikipedia:Wikipedia A physical quality inhering in a bearer by virtue of the bearer's disposition to being fit to be eaten. 2009-10-26T01:20:24Z edibleness quality PATO:0002138 edibility PATO:0002138 A physical quality inhering in a bearer by virtue of the bearer's disposition to being fit to be eaten. PATOC:VO A physical quality inhering in a bearer by virtue of the bearer being suitable for use as food. 2009-10-26T01:21:34Z quality PATO:0002139 edible PATO:0002139 A physical quality inhering in a bearer by virtue of the bearer being suitable for use as food. PATOC:VO A physical quality inhering in a bearer by virtue of the bearer not being suitable for use as food. 2009-10-26T01:22:27Z quality PATO:0002140 inedible PATO:0002140 A physical quality inhering in a bearer by virtue of the bearer not being suitable for use as food. PATOC:VO A density quality which lacks pattern. 2009-10-28T01:57:53Z quality PATO:0002141 irregular density PATO:0002141 A density quality which lacks pattern. PATOC:GVG 2009-10-28T03:14:54Z quality PATO:0002142 bracket PATO:0002142 2009-10-30T02:18:39Z quality PATO:0002143 sloped downward PATO:0002143 A radiopacity that is relatively high. 2009-10-30T03:30:39Z quality PATO:0002144 increased radiopacity PATO:0002144 A radiopacity that is relatively high. PATOC:GVG A radiopacity that is relatively low. 2009-10-30T03:31:31Z quality PATO:0002145 decreased radiopacity PATO:0002145 A radiopacity that is relatively low. PATOC:GVG A quality inhering in a bearer by virtue of the severity of infectious disease caused by the bearer in a target organism. 2009-10-30T05:04:06Z quality PATO:0002146 virulence PATO:0002146 A quality inhering in a bearer by virtue of the severity of infectious disease caused by the bearer in a target organism. https://orcid.org/0000-0001-5208-3432 https://orcid.org/0000-0001-8941-3984 A virulence that is relatively low. 2009-10-30T05:05:02Z attenuated quality PATO:0002147 reduced virulence PATO:0002147 A virulence that is relatively low. PATOC:GVG A virulence that is relatively high. 2009-10-30T05:13:10Z quality PATO:0002148 increased virulence PATO:0002148 A virulence that is relatively high. PATOC:GVG A quality inhering in a bearer by virtue of the bearer exhibiting increased density resulting in exhibiting increased degree of radiopacity (in X-rays). 2009-11-03T02:59:08Z quality PATO:0002149 ivory PATO:0002149 A quality inhering in a bearer by virtue of the bearer exhibiting increased density resulting in exhibiting increased degree of radiopacity (in X-rays). PATOC:GVG A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards from the part of the body from which the tail arises. 2009-11-06T01:13:10Z splayed inferior (human torso) splayed posterior quality PATO:0002150 splayed caudal PATO:0002150 A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards from the part of the body from which the tail arises. PATOC:GVG A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards from the back or upper surface of an organism. 2009-11-06T01:14:09Z quality splayed posterior (human torso) PATO:0002151 splayed dorsal PATO:0002151 A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards from the back or upper surface of an organism. PATOC:GVG A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards from the side. 2009-11-06T01:14:22Z quality PATO:0002152 splayed lateral PATO:0002152 A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards from the side. PATOC:GVG A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards the front of an organism. 2009-11-06T01:14:31Z splayed anterior splayed superior (human torso) quality PATO:0002153 splayed rostral PATO:0002153 A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards the front of an organism. PATOC:GVG A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards the abdomen of an organism. 2009-11-06T01:14:42Z splayed anterior (human torso) splayed inferior (human head) quality PATO:0002154 splayed ventral PATO:0002154 A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards the abdomen of an organism. PATOC:GVG A rotation quality inhering in a bearer by virtue of being rotated towards the middle of an organism. 2009-11-06T02:23:28Z internally rotated quality PATO:0002155 medially rotated PATO:0002155 A rotation quality inhering in a bearer by virtue of being rotated towards the middle of an organism. PATOC:GVG A rotation quality inhering in a bearer by virtue of being rotated towards the side of an organism. 2009-11-06T02:25:10Z externally rotated quality PATO:0002156 laterally rotated PATO:0002156 A rotation quality inhering in a bearer by virtue of being rotated towards the side of an organism. PATOC:GVG A positional quality inhering in a bearer by virtue of the bearer's being slightly out of its usual or proper place, or position. 2009-11-06T03:34:15Z PATO:0002160 partial dislocated towards subluxation suluxated towards quality PATO:0002157 partially dislocated PATO:0002157 A positional quality inhering in a bearer by virtue of the bearer's being slightly out of its usual or proper place, or position. PATOC:GVG PATO:0002158 true PATO:0002159 true PATO:0002160 true Having two horns or horn-shaped branches. 2009-11-11T02:37:52Z quality PATO:0002161 bicornuate PATO:0002161 Having two horns or horn-shaped branches. mondofacto:mondofacto A concave quality inhering in a bearer by virtue of the bearer's forming or resembling an arch of an increased apical height. 2009-11-26T02:34:06Z quality PATO:0002162 high-arched PATO:0002162 A concave quality inhering in a bearer by virtue of the bearer's forming or resembling an arch of an increased apical height. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's bodily structure that has protruded through an abnormal opening in the wall that contains it into the surface or boundary of another entity. 2009-11-26T04:50:43Z quality PATO:0002163 herniated into PATO:0002163 A quality inhering in a bearer by virtue of the bearer's bodily structure that has protruded through an abnormal opening in the wall that contains it into the surface or boundary of another entity. PATOC:GVG A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the middle. 2009-12-02T10:06:21Z quality PATO:0002164 curved medial PATO:0002164 A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the middle. PATOC:GVG To bent or hang downwards. 2009-12-02T03:32:55Z sagging quality PATO:0002165 drooping PATO:0002165 To bent or hang downwards. thefreedictionary.:thefreedictionary. A duration quality of a process inhering in a bearer by virtue of the bearer's premature completion of the closure of the opening of an anatomical entity. 2009-12-02T04:10:10Z quality PATO:0002166 premature closure PATO:0002166 A duration quality of a process inhering in a bearer by virtue of the bearer's premature completion of the closure of the opening of an anatomical entity. PATOC:GVG A protruding quality inhering in a bearer by virtue of the bearer's bodily structure that has protruded out of the surface or boundary of another entity. 2009-12-02T05:19:32Z quality PATO:0002167 herniated out of PATO:0002167 A protruding quality inhering in a bearer by virtue of the bearer's bodily structure that has protruded out of the surface or boundary of another entity. PATOC:GVG An angular placement quality inhering in a bearer by virtue of the bearer being changed in position in relation to another entity. 2010-01-14T04:45:18Z quality mislocalised to PATO:0002168 displaced to PATO:0002168 An angular placement quality inhering in a bearer by virtue of the bearer being changed in position in relation to another entity. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's being split along the median axis. 2010-02-03T04:37:15Z quality PATO:0002169 split medially PATO:0002169 A shape quality inhering in a bearer by virtue of the bearer's being split along the median axis. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's being split asymmetrically on one side. 2010-02-03T04:37:40Z quality PATO:0002170 split laterally PATO:0002170 A shape quality inhering in a bearer by virtue of the bearer's being split asymmetrically on one side. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's being split on two side. 2010-02-03T04:37:53Z quality PATO:0002171 split bilaterally PATO:0002171 A shape quality inhering in a bearer by virtue of the bearer's being split on two side. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's being split along the radial axis. 2010-02-03T04:42:35Z quality PATO:0002172 split radially PATO:0002172 A shape quality inhering in a bearer by virtue of the bearer's being split along the radial axis. PATOC:GVG An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning towards an additional entity. 2010-02-22T03:18:17Z quality PATO:0002173 misaligned towards PATO:0002173 An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning towards an additional entity. PATOC:GVG An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning away from an additional entity. 2010-02-22T03:18:48Z quality PATO:0002174 misaligned away from PATO:0002174 An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning away from an additional entity. PATOC:GVG A spatial quality inhering in a bearer by virtue of the bearer's changed direction of position towards another entity. 2010-02-25T09:14:42Z quality PATO:0002175 spatial deviation PATO:0002175 A spatial quality inhering in a bearer by virtue of the bearer's changed direction of position towards another entity. PATO:GVG A deviation quality inhering in a bearer by virtue of the bearer's changed direction of position towards the side. 2010-02-25T09:16:04Z quality PATO:0002176 deviation towards the lateral side PATO:0002176 A deviation quality inhering in a bearer by virtue of the bearer's changed direction of position towards the side. PATOC:GVG A deviation quality inhering in a bearer by virtue of the bearer's changed direction of position towards the middle. 2010-02-25T09:16:56Z quality PATO:0002177 deviation towards the medial side PATO:0002177 A deviation quality inhering in a bearer by virtue of the bearer's changed direction of position towards the middle. PATOC:GVG A positional quality inhering in a bearer by virtue of the bearer's being out of its usual or proper place, or position around a central point or axis. 2010-02-25T11:24:58Z quality PATO:0002178 mislocalised radially PATO:0002178 A positional quality inhering in a bearer by virtue of the bearer's being out of its usual or proper place, or position around a central point or axis. PATOC:GVG A positional quality inhering in a bearer by virtue of the bearer's being positioned towards to point of attachment or origin. 2010-02-25T12:34:48Z quality PATO:0002179 mislocalised proximally PATO:0002179 A positional quality inhering in a bearer by virtue of the bearer's being positioned towards to point of attachment or origin. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's being free of curves, bends, or angles. 2010-02-28T08:54:59Z quality PATO:0002180 straight PATO:0002180 A shape quality inhering in a bearer by virtue of the bearer's being free of curves, bends, or angles. merriam-webster:merriam-webster A positional quality inhering in a bearer by virtue the bearer's being changed in position. 2010-03-01T02:56:33Z quality PATO:0002181 displaced PATO:0002181 A positional quality inhering in a bearer by virtue the bearer's being changed in position. PATOC:GVG A quality which inheres in a molecular entity, a single molecule, atom, ion, radical etc. 2010-03-10T03:18:15Z PATO:0002061 relational molecular quality quality PATO:0002182 molecular quality PATO:0002182 A quality which inheres in a molecular entity, a single molecule, atom, ion, radical etc. PATOC:GVG A molecular quality that inheres in a molecular entity by virtue of whether that there is a presence of cycles in the connection of the atoms within the molecular entity. 2010-03-10T03:19:46Z quality PATO:0002183 cyclicity PATO:0002183 A molecular quality that inheres in a molecular entity by virtue of whether that there is a presence of cycles in the connection of the atoms within the molecular entity. PATOC:JH Cyclic cyclicity inheres in a molecule when the atoms of the molecule do contain at least one cycle in the atom-atom connection paths (through bonds). 2010-03-10T03:20:54Z quality PATO:0002184 cyclic cyclicity PATO:0002184 Cyclic cyclicity inheres in a molecule when the atoms of the molecule do contain at least one cycle in the atom-atom connection paths (through bonds). PATOC:JH Acyclic cyclicity inheres in a molecule when the atoms within the molecule do not contain at least one cycle in the atom-atom connection paths (through the bonds). 2010-03-10T03:21:39Z quality PATO:0002185 acyclic cyclicity PATO:0002185 Acyclic cyclicity inheres in a molecule when the atoms within the molecule do not contain at least one cycle in the atom-atom connection paths (through the bonds). PATOC:JH A molecular quality that inheres in a molecular entity by virtue of whether or not the molecular entity has a separation of electric charge which leads to the molecule having an electric dipole. 2010-03-10T03:22:04Z quality PATO:0002186 polarity PATO:0002186 A molecular quality that inheres in a molecular entity by virtue of whether or not the molecular entity has a separation of electric charge which leads to the molecule having an electric dipole. PATOC:JH Polar polarity is a quality that inheres in a molecular entity when the molecular entity is polar, i.e. does possess an electric dipole. 2010-03-10T03:22:49Z quality PATO:0002187 polar polarity PATO:0002187 Polar polarity is a quality that inheres in a molecular entity when the molecular entity is polar, i.e. does possess an electric dipole. PATOC:JH A molecular quality which inheres in a molecular entity when the molecular entity does not possess an electrical dipole. 2010-03-10T03:24:01Z quality PATO:0002188 nonpolar polarity PATO:0002188 A molecular quality which inheres in a molecular entity when the molecular entity does not possess an electrical dipole. PATOC:JH The ease of distortion of the electron cloud of a molecular entity by an electric field. 2010-03-10T03:24:47Z quality PATO:0002189 electric polarizability PATO:0002189 The ease of distortion of the electron cloud of a molecular entity by an electric field. PATOC:JH A molecular quality that inheres in a molecular entity by virtue of the presence of a conjugated ring of unsaturated bonds, lone pairs, or empty orbitals that exhibit a stabilization stronger than would be expected by the stabilization of conjugation alone. 2010-03-10T03:25:27Z quality PATO:0002190 aromaticity PATO:0002190 A molecular quality that inheres in a molecular entity by virtue of the presence of a conjugated ring of unsaturated bonds, lone pairs, or empty orbitals that exhibit a stabilization stronger than would be expected by the stabilization of conjugation alone. PATOC:JH A molecular quality that inheres in a molecular entity when it possesses at least one ring that is aromatic, i.e. A conjugated ring of unsaturated bonds, lone pairs, or empty orbitals that exhibit a stabilization stronger than would be expected by the stabilization of conjugation alone. 2010-03-10T03:25:59Z quality PATO:0002191 aromatic PATO:0002191 A molecular quality that inheres in a molecular entity when it possesses at least one ring that is aromatic, i.e. A conjugated ring of unsaturated bonds, lone pairs, or empty orbitals that exhibit a stabilization stronger than would be expected by the stabilization of conjugation alone. PATOC:JH A quality that inheres in a molecular entity by virtue of the molecule possessing no rings that are aromatic. 2010-03-10T03:26:41Z quality PATO:0002192 non-aromatic PATO:0002192 A quality that inheres in a molecular entity by virtue of the molecule possessing no rings that are aromatic. PATOC:JH A molecular quality that inheres in a molecular entity by virtue of the overall electric charge of the molecule, which is due to a comparison between the total number of electrons and the total number of protons. 2010-03-10T03:28:54Z quality PATO:0002193 electric charge PATO:0002193 A molecular quality that inheres in a molecular entity by virtue of the overall electric charge of the molecule, which is due to a comparison between the total number of electrons and the total number of protons. PATOC:JH A quality which inheres in a molecular entity by virtue of the molecular entity possessing the same amount of electrons overall as protons, thus having an overall neutral charge. 2010-03-10T03:29:37Z quality PATO:0002194 neutral charge PATO:0002194 A quality which inheres in a molecular entity by virtue of the molecular entity possessing the same amount of electrons overall as protons, thus having an overall neutral charge. PATOC:JH A quality which inheres in a molecular entity by virtue of the molecular entity possessing more protons overall than electrons, thus having an overall positive charge. 2010-03-10T03:30:06Z quality PATO:0002195 positive charge PATO:0002195 A quality which inheres in a molecular entity by virtue of the molecular entity possessing more protons overall than electrons, thus having an overall positive charge. PATOC:JH A quality which inheres in a molecular entity by virtue of the molecular entity possessing more electrons overall than protons, thus having an overall negative charge. 2010-03-10T03:30:39Z quality PATO:0002196 negative charge PATO:0002196 A quality which inheres in a molecular entity by virtue of the molecular entity possessing more electrons overall than protons, thus having an overall negative charge. PATOC:JH A quality that describes the power of an atom to attract electrons to itself . 2010-03-10T03:31:15Z quality PATO:0002197 electronegativity PATO:0002197 A quality that describes the power of an atom to attract electrons to itself . PATOC:JH A quality inhering in a bearer by virtue of its constitution. 2010-03-15T04:35:27Z quality PATO:0002198 quality of a substance PATO:0002198 A quality inhering in a bearer by virtue of its constitution. PATOC:GVG A quality which inheres in a substance by virtue of the ease with which the substance can be changed from a solid to a liquid state especially by the application of heat. 2010-03-15T04:36:57Z quality PATO:0002199 meltability PATO:0002199 A quality which inheres in a substance by virtue of the ease with which the substance can be changed from a solid to a liquid state especially by the application of heat. PATOC:JH A quality which inheres in a substance by virtue of the ease with which the substance can be changed into a gaseous state. 2010-03-15T04:38:02Z quality PATO:0002200 vaporizability PATO:0002200 A quality which inheres in a substance by virtue of the ease with which the substance can be changed into a gaseous state. PATOC:JH A behavioral quality inhering ina bearer by virtue of the bearer's unequal distribution of fine motor skill between its left and right hands or feet. 2010-03-22T05:48:33Z quality PATO:0002201 Adapted from Wikipedia and the birnlex term that is dbxref'd. Added on behalf of OBI at March 2010 workshop. handedness PATO:0002201 A behavioral quality inhering ina bearer by virtue of the bearer's unequal distribution of fine motor skill between its left and right hands or feet. birnlex:2178 Handedness where the organism preferentially uses the left hand or foot for tasks requiring the use of a single hand or foot or a dominant hand or foot. 2010-03-22T05:49:06Z quality PATO:0002202 left handedness PATO:0002202 Handedness where the organism preferentially uses the left hand or foot for tasks requiring the use of a single hand or foot or a dominant hand or foot. birnlex:2038 Handedness where the organism preferentially uses the right hand or foot for tasks requiring the use of a single hand or foot or a dominant hand or foot. 2010-03-22T05:49:19Z quality PATO:0002203 right handedness PATO:0002203 Handedness where the organism preferentially uses the right hand or foot for tasks requiring the use of a single hand or foot or a dominant hand or foot. birnlex:2184 Handedness where the organism exhibits no overall dominance in the use of right or left hand or foot in the performance of tasks that require one hand or foot or a dominant hand or foot. 2010-03-22T05:49:30Z quality PATO:0002204 ambidextrous handedness PATO:0002204 Handedness where the organism exhibits no overall dominance in the use of right or left hand or foot in the performance of tasks that require one hand or foot or a dominant hand or foot. birnlex:2042 A quality inhering in a bearer by virtue of the bearer's ability to hold an electrical charge. 2010-03-25T09:42:51Z quality PATO:0002205 Capacitance is also a measure of the amount of electrical energy stored (or separated) for a given electric potential. capacitance PATO:0002205 A quality inhering in a bearer by virtue of the bearer's ability to hold an electrical charge. Wikipedia:Wikipedia A maturity quality inhering to a bearer by virtue of the bearer's being at the point or short after birth. 2010-05-07T12:11:47Z quality PATO:0002206 neonatal PATO:0002206 A maturity quality inhering to a bearer by virtue of the bearer's being at the point or short after birth. PATOC:GVG A quality that is the distance between the end of the inserted object and the surface of the object into which it penetrates. 2010-05-14T11:40:24Z quality PATO:0002207 insertion depth PATO:0002207 A quality that is the distance between the end of the inserted object and the surface of the object into which it penetrates. PATOC:GVG A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of a spoon. 2010-07-08T12:13:12Z quality PATO:0002208 spoon-shaped PATO:0002208 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of a spoon. thefreedictionary:http://www.thefreedictionary.com/spoon-shaped A shape quality inhering in a bearer by virtue of the bearer's having the shape of an incisor tooth. 2010-07-08T12:16:04Z quality PATO:0002209 incisiform PATO:0002209 A shape quality inhering in a bearer by virtue of the bearer's having the shape of an incisor tooth. thefreedictionary:http://www.thefreedictionary.com/incisiform A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a teardrop. 2010-07-08T12:19:08Z bulb-shaped bulblike quality swollen PATO:0002210 bulbous PATO:0002210 A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a teardrop. PATOC:GVG A curvature quality inhering in a bearer by virtue of the bearer's being curved backward or inward. 2010-07-08T12:26:45Z quality PATO:0002211 recurved PATO:0002211 A curvature quality inhering in a bearer by virtue of the bearer's being curved backward or inward. merriam-webster:http://www.merriam-webster.com/dictionary/recurved A shape quality inhering in a bearer by virtue of the bearer's being small or narrow in circumference or width in proportion to length or height. 2010-07-08T01:32:26Z quality gracile PATO:0002212 slender PATO:0002212 A shape quality inhering in a bearer by virtue of the bearer's being small or narrow in circumference or width in proportion to length or height. merriam-webster:http://www.merriam-webster.com/dictionary/slender A concave 3-D shape quality inhering in a bearer by virtue of the bearer's shape being inversely clavate. 2010-07-08T01:47:09Z quality PATO:0002213 obclavate PATO:0002213 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's shape being inversely clavate. PATOC:GVG A lobed quality inhering in a bearer by virtue of the bearer's being divided into or having two lobes. 2010-07-08T01:54:08Z quality PATO:0002214 bilobed PATO:0002214 A lobed quality inhering in a bearer by virtue of the bearer's being divided into or having two lobes. thefreedictionary:http://www.thefreedictionary.com/bilobed A shape quality inhering in a bearer by virtue of the bearer's having the shape of a scythe or sickle. 2010-07-08T01:57:46Z falcate hooked scythe-shaped sickle-shaped unciform uncinate quality PATO:0002215 falciform PATO:0002215 A shape quality inhering in a bearer by virtue of the bearer's having the shape of a scythe or sickle. merriam-webster:http://www.merriam-webster.com/dictionary/falciform A molecular quality that pertains to the post-translational modification of a protein by the covalent attachment of one or more ubiquitin monomer. 2010-07-08T02:00:37Z quality Ubiquitylation PATO:0002216 ubiquinated PATO:0002216 A molecular quality that pertains to the post-translational modification of a protein by the covalent attachment of one or more ubiquitin monomer. neurolex:http://neurolex.org/ A molecular quality inhering in a bearer by virtue of the bearer's being combined, or impregnated, with nitric acid, or some of its compounds. 2010-07-08T02:04:03Z quality PATO:0002217 nitrated PATO:0002217 A molecular quality inhering in a bearer by virtue of the bearer's being combined, or impregnated, with nitric acid, or some of its compounds. neurolex:http://neurolex.org/wiki/Category:Nitrated_Molecular_Quality A quality inhering in a bearer by virtue of the bearer's loss of myelin sheath. 2010-07-08T02:08:06Z quality PATO:0002218 For example loss of myelin sheath from a normally myelinated axon or dendrite. demyelinated PATO:0002218 A quality inhering in a bearer by virtue of the bearer's loss of myelin sheath. thefreedictionary:http://www.thefreedictionary.com/demyelinated A quality inhering in a bearer that is shaped in the form of a fan. 2010-07-09T01:43:42Z fan-like quality PATO:0002219 fan-shaped PATO:0002219 A quality inhering in a bearer that is shaped in the form of a fan. thefreedictionary:http://www.thefreedictionary.com/fan-shaped A quality inhering in a protein or a molecule by virtue of the bearer's having a phosphate (PO4) group. 2010-07-09T01:50:14Z quality PATO:0002220 phosphorylated PATO:0002220 A quality inhering in a protein or a molecule by virtue of the bearer's having a phosphate (PO4) group. wikipedia:en.wikipedia.org/wiki/Phosphorylated A quality inhering in a bearer by virtue of the bearer's being phosphorylated to a more than normal extent, or fully saturated with phosphate groups. 2010-07-09T01:51:52Z hyperphosphorylated quality PATO:0002221 increased phosphorylation PATO:0002221 A quality inhering in a bearer by virtue of the bearer's being phosphorylated to a more than normal extent, or fully saturated with phosphate groups. Wikipedia:http://en.wiktionary.org/wiki/hyperphosphorylated A quality inhering in a bearer by virtue of the bearer's being phosphorylated to a lesser than normal extent, or less than fully. 2010-07-09T01:54:22Z hypophosporylated quality PATO:0002222 decreased phosphorylation PATO:0002222 A quality inhering in a bearer by virtue of the bearer's being phosphorylated to a lesser than normal extent, or less than fully. Wikipedia:http://en.wiktionary.org/wiki/hypophosphorylated A quality inhering in a bearer by virtue of the bearer's having reacted with oxygen, or been modified by oxidation (the reaction in which the atoms of an element lose electrons and the valence of the element increases). 2010-07-09T01:59:35Z quality PATO:0002223 oxidized PATO:0002223 A quality inhering in a bearer by virtue of the bearer's having reacted with oxygen, or been modified by oxidation (the reaction in which the atoms of an element lose electrons and the valence of the element increases). Wikipedia:http://en.wiktionary.org/wiki/oxidized An angular shape quality inhering in a bearer by virtue of the bearer's having a single angle in its length giving the bearer the form of the letter V. 2010-07-13T04:12:13Z quality PATO:0002224 V-shaped PATO:0002224 An angular shape quality inhering in a bearer by virtue of the bearer's having a single angle in its length giving the bearer the form of the letter V. PATOC:JE An angular shape quality inhering in a bearer by virtue of the bearer's having a single angle in its length giving the bearer the form of the letter L. 2010-07-13T04:14:59Z quality PATO:0002225 L-shaped PATO:0002225 An angular shape quality inhering in a bearer by virtue of the bearer's having a single angle in its length giving the bearer the form of the letter L. PATOC:JE A cylindrical shape quality inhering in a bearer by virtue of the bearer's being imperfectly cylindrical or approximately cylindrical. 2010-07-13T04:22:30Z quality PATO:0002226 subcylindrical PATO:0002226 A cylindrical shape quality inhering in a bearer by virtue of the bearer's being imperfectly cylindrical or approximately cylindrical. url:http://www.thefreedictionary.com/Subcylindrical A concave 3-D shape quality inhering in a bearer by virtue of the bearer's shape form resembling the shape of a cup. 2010-07-13T04:29:32Z cup-like quality PATO:0002227 cup-shaped PATO:0002227 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's shape form resembling the shape of a cup. url:http://www.thefreedictionary.com/cup-shaped A tapered shape quality inhering in a bearer by virtue of the bearer's tapering gradually to a sharp point. 2010-07-15T09:03:18Z quality PATO:0002228 acuminate PATO:0002228 A tapered shape quality inhering in a bearer by virtue of the bearer's tapering gradually to a sharp point. url:http://www.thefreedictionary.com/acuminate A quadrangular shape quality inhering in a bearer by virtue of the bearer's being approximately rectangular. 2010-07-19T12:18:57Z quality PATO:0002229 subrectangular PATO:0002229 A quadrangular shape quality inhering in a bearer by virtue of the bearer's being approximately rectangular. url:http://dictionary.reference.com/browse/subrectangular?qsrc=2446&o=100074 A triangular shape quality inhering in a bearer by virtue of the bearer's being nearly, but not perfectly, triangular. 2010-07-19T12:20:59Z quality PATO:0002230 subtriangular PATO:0002230 A triangular shape quality inhering in a bearer by virtue of the bearer's being nearly, but not perfectly, triangular. url:http://www.thefreedictionary.com/Subtriangular A split shape quality inhering in a bearer by virtue of the bearer's having or being divided into many lobes or similar segments. 2010-07-19T12:23:02Z quality PATO:0002231 multifid PATO:0002231 A split shape quality inhering in a bearer by virtue of the bearer's having or being divided into many lobes or similar segments. url:http://www.thefreedictionary.com/multifid A 2-D shape quality inhering in a bearer by virtue of the bearer's having shape or form of half a circle. 2010-07-19T01:02:27Z half circle semicircle quality PATO:0002232 semicircular PATO:0002232 A 2-D shape quality inhering in a bearer by virtue of the bearer's having shape or form of half a circle. url:http://www.thefreedictionary.com/semicircle A spatial quality inhering in a bearer by virtue of the bearer's being located far (not close to) in space in relation to another entity. 2010-07-19T02:43:53Z distant from remote from quality PATO:0002233 far from PATO:0002233 A spatial quality inhering in a bearer by virtue of the bearer's being located far (not close to) in space in relation to another entity. PATOC:PM A notched shape quality inhering in a bearer by virtue of the bearer's having a notched tip or edge. 2010-07-19T04:25:58Z quality PATO:0002234 emarginate PATO:0002234 A notched shape quality inhering in a bearer by virtue of the bearer's having a notched tip or edge. url:http://www.thefreedictionary.com/emarginate A tapered shape quality inhering in a bearer by virtue of the bearer's being flat, slender, and tapering to a point. 2010-07-19T04:29:05Z blade-shaped ensiform sword-like sword-shaped quality PATO:0002235 blade-like PATO:0002235 A tapered shape quality inhering in a bearer by virtue of the bearer's being flat, slender, and tapering to a point. PATOC:JE Shape quality inhering in a bearer by virtue of the bearer's being shaped like a wing. 2010-07-23T02:19:14Z wing-shaped quality PATO:0002236 aliform PATO:0002236 Shape quality inhering in a bearer by virtue of the bearer's being shaped like a wing. url:http://www.thefreedictionary.com/aliform A curvature quality inhering in a bearer by virtue of the bearer's being curved backward or downward. 2010-07-23T02:22:09Z quality PATO:0002237 retrorse PATO:0002237 A curvature quality inhering in a bearer by virtue of the bearer's being curved backward or downward. url:http://www.thefreedictionary.com/retrorse A curvature quality inhering in a bearer by virtue of the bearer's being curved forward or upward. 2010-07-23T02:22:56Z quality PATO:0002238 antrorse PATO:0002238 A curvature quality inhering in a bearer by virtue of the bearer's being curved forward or upward. url:http://www.thefreedictionary.com/antrorse A concave 3-D shape that inheres in the bearer by virtue of the bearer's nearly) symmetric shape wide at its ends and narrow in the middle, resembling the figure of number 8. 2010-07-23T02:25:24Z figure 8 shaped quality PATO:0002239 hourglass-shaped PATO:0002239 A concave 3-D shape that inheres in the bearer by virtue of the bearer's nearly) symmetric shape wide at its ends and narrow in the middle, resembling the figure of number 8. url:http://en.wikipedia.org/wiki/Hourglass-shaped A convex 3-D shape quality inhering in a bearer by virtue of the bearer's shape resembling falling drop. 2010-07-23T02:31:11Z drop shaped quality PATO:0002240 teardrop-shaped PATO:0002240 A convex 3-D shape quality inhering in a bearer by virtue of the bearer's shape resembling falling drop. url:wordnetweb.princeton.edu/perl/webwn A lobed quality inhering in a bearer by virtue of the bearer's being divided into or having three lobes. 2010-07-28T12:57:46Z quality PATO:0002241 trilobed PATO:0002241 A lobed quality inhering in a bearer by virtue of the bearer's being divided into or having three lobes. url:http://www.thefreedictionary.com/trilobed A physical quality inhering in a bearer by virtue of the bearer's rate of change of the position. 2010-07-28T02:52:48Z quality PATO:0002242 velocity PATO:0002242 A physical quality inhering in a bearer by virtue of the bearer's rate of change of the position. url:http://en.wikipedia.org/wiki/Velocity A physical quality inhering in a fluid (liquid or gas) by virtue of the amount of fluid which passes through a given surface per unit time. 2010-07-28T03:00:20Z volume flow rate volumetric flow rate quality PATO:0002243 fluid flow rate PATO:0002243 A physical quality inhering in a fluid (liquid or gas) by virtue of the amount of fluid which passes through a given surface per unit time. url:http://en.wikipedia.org/wiki/Volumetric_flow_rate A flow rate quality inhering in a substance by virtue of the mass of substance which passes through a given surface per unit time. 2010-07-28T03:02:03Z quality PATO:0002244 mass flow rate PATO:0002244 A flow rate quality inhering in a substance by virtue of the mass of substance which passes through a given surface per unit time. url:http://en.wikipedia.org/wiki/Mass_flow_rate A force which relative high. 2010-08-04T11:12:20Z increased force amplitude quality PATO:0002245 increased force PATO:0002245 A force which relative high. PATOC:GVG A force which is relative low. 2010-08-04T11:13:13Z decreased force amplitude quality PATO:0002246 decreased force PATO:0002246 A force which is relative low. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's having or lacking of substances produced by living organisms that have a color resulting from selective color absorption. 2010-08-09T04:14:00Z quality PATO:0002247 degree of pigmentation PATO:0002247 A quality inhering in a bearer by virtue of the bearer's having or lacking of substances produced by living organisms that have a color resulting from selective color absorption. url:http://en.wikipedia.org/wiki/Biological_pigment A degree of pigmentation quality inhering in a bearer by virtue of the bearer's having substances produced by living organisms that have a color resulting from selective color absorption. 2010-08-09T04:16:49Z quality PATO:0002248 pigmented PATO:0002248 A degree of pigmentation quality inhering in a bearer by virtue of the bearer's having substances produced by living organisms that have a color resulting from selective color absorption. PATOC:GVG A degree of pigmentation quality inhering in a bearer by virtue of the bearer's lacking substances produced by living organisms that have a color resulting from selective color absorption. 2010-08-09T04:17:04Z depigmented quality PATO:0002249 unpigmented PATO:0002249 A degree of pigmentation quality inhering in a bearer by virtue of the bearer's lacking substances produced by living organisms that have a color resulting from selective color absorption. PATOC:GVG A degree of pigmentation quality that is relatively high. 2010-08-09T04:17:19Z hyperpigmented quality PATO:0002250 increased pigmentation PATO:0002250 A degree of pigmentation quality that is relatively high. PATOC:GVG A degree of pigmentation quality that is relative low. 2010-08-09T04:17:37Z hypopigmented quality PATO:0002251 decreased pigmentation PATO:0002251 A degree of pigmentation quality that is relative low. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's being flattened along the antero-posterior axis. 2010-08-16T03:57:42Z antero-posteriorly compressed quality PATO:0002252 antero-posteriorly flattened PATO:0002252 A quality inhering in a bearer by virtue of the bearer's being flattened along the antero-posterior axis. PATOC:JC A quality inhering in a bearer by virtue of the bearer's being roundish, flattish shape, possibly with a slightly angled edge. 2010-08-16T03:57:48Z plate-like quality PATO:0002253 platelike PATO:0002253 A quality inhering in a bearer by virtue of the bearer's being roundish, flattish shape, possibly with a slightly angled edge. PATOC:CVC A quality inhering in a bearer by virtue of the bearer's surface becoming more extended in a plane. 2010-08-16T03:59:34Z quality compressed PATO:0002254 Becoming flat but not necessarily completely flat. flattened PATO:0002254 A quality inhering in a bearer by virtue of the bearer's surface becoming more extended in a plane. PATOC:CVS Texture quality inhering in a bearer by virtue of the bearer's being marked with one or more channels. 2010-09-01T10:27:48Z quality channeled creased PATO:0002255 grooved PATO:0002255 Texture quality inhering in a bearer by virtue of the bearer's being marked with one or more channels. PATOC:JE A cuscpidate quality inhering in a bearer by virtue of the bearer possessing three cusps. 2010-09-08T02:21:50Z tricuspid quality PATO:0002256 tricuspidate PATO:0002256 A cuscpidate quality inhering in a bearer by virtue of the bearer possessing three cusps. PATOC:WD A cuscpidate quality inhering in a bearer by virtue of the bearer possessing more than one cusp. 2010-09-08T02:23:22Z quality PATO:0002257 multicuspidate PATO:0002257 A cuscpidate quality inhering in a bearer by virtue of the bearer possessing more than one cusp. PATOC:WD A shape quality inhering in a bearer by virtue of the bearer's having a point. 2010-09-08T03:15:16Z quality PATO:0002258 pointed PATO:0002258 A shape quality inhering in a bearer by virtue of the bearer's having a point. PATOC:http://www.merriam-webster.com/dictionary/pointed A spatial quality inhering in a bearer by virtue of the bearer's being located near in space in relation to another entity. 2010-09-08T03:20:06Z PATO:0001771 approaches close to near to vicinity of quality PATO:0002259 adjacent to PATO:0002259 A spatial quality inhering in a bearer by virtue of the bearer's being located near in space in relation to another entity. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's being partially upright in position or posture. 2010-09-08T03:27:21Z semi upright quality PATO:0002260 semi erect PATO:0002260 A quality inhering in a bearer by virtue of the bearer's being partially upright in position or posture. PATOC:GVG A spatial quality inhering in a bearer by virtue of the bearer's location within another entity. 2010-09-09T09:36:56Z quality PATO:0002261 located in PATO:0002261 A spatial quality inhering in a bearer by virtue of the bearer's location within another entity. PATOC:WD A quality inhering in a protein or a molecule by virtue of the addition of a phosphate (PO4) group to the bearer. 2010-09-16T08:57:56Z quality PATO:0002262 phosphorylation PATO:0002262 A quality inhering in a protein or a molecule by virtue of the addition of a phosphate (PO4) group to the bearer. url:http://en.wikipedia.org/wiki/Phosphorylation A quality inhering in a protein or a molecule by virtue of the bearer's lacking a phosphate (PO4) group. 2010-09-16T09:04:21Z quality PATO:0002263 dephosphorylated PATO:0002263 A quality inhering in a protein or a molecule by virtue of the bearer's lacking a phosphate (PO4) group. url:http://en.wikipedia.org/wiki/Dephosphorylation A structural quality inhering in a bearer by virtue of the bearer's being arranged in a systematic fashion. 2010-09-16T10:22:52Z quality PATO:0002264 organization quality PATO:0002264 A structural quality inhering in a bearer by virtue of the bearer's being arranged in a systematic fashion. PATOC:GVG A behavioral quality of a process inhering in a bearer by virtue of the bearer's disposition to exhibit marked activity. 2010-09-21T06:56:58Z quality PATO:0002265 behavioural activity PATO:0002265 A behavioral quality of a process inhering in a bearer by virtue of the bearer's disposition to exhibit marked activity. PATOC:GVG A shape that inheres in a 3 dimensional entity. 2010-10-05T12:31:16Z quality PATO:0002266 3-D shape PATO:0002266 A shape that inheres in a 3 dimensional entity. PATOC:OREGON 2010-10-05T12:34:31Z quality PATO:0002267 edge shape PATO:0002267 A positional quality inhering in a bearer by virtue of the bearer's being located in a position equidistant from edges. 2010-10-05T01:09:32Z quality PATO:0002268 centered PATO:0002268 A positional quality inhering in a bearer by virtue of the bearer's being located in a position equidistant from edges. PATOC:OREGON A structural quality of the collection or massing of one physical object within another physical object. 2010-10-26T01:57:02Z quality pooled PATO:0002269 accumulation PATO:0002269 A structural quality of the collection or massing of one physical object within another physical object. PATOC:CVC An increased number of physical objects that are accumulated within another physical object usually as a result of a failure to break down or remove objects in a timely manner. 2010-10-26T02:00:20Z accumulated quality PATO:0002270 increased accumulation PATO:0002270 An increased number of physical objects that are accumulated within another physical object usually as a result of a failure to break down or remove objects in a timely manner. PATOC:GVG An accumulation which is relative low. 2010-10-26T02:04:45Z quality PATO:0002271 decreased accumulation PATO:0002271 An accumulation which is relative low. PATOC:GVG A spatial quality inhering in a bearer by virtue of the bearer's being located at the same continuous distance relative to another object. 2010-10-26T02:07:42Z quality PATO:0002272 parallel to PATO:0002272 A spatial quality inhering in a bearer by virtue of the bearer's being located at the same continuous distance relative to another object. PATOC:WD Multicolored quality inhering in a bearer by virtue of the bearer's being colored with a variegated pattern resembling marble,. 2010-11-16T11:17:32Z quality PATO:0002273 marbled PATO:0002273 Multicolored quality inhering in a bearer by virtue of the bearer's being colored with a variegated pattern resembling marble,. url:http://www.oed.com/ Multicolored quality inhering in a bearer by virtue of the bearer's being dappled with spots, patches, or blotches of different colors. 2010-11-16T11:22:57Z quality PATO:0002274 mottled PATO:0002274 Multicolored quality inhering in a bearer by virtue of the bearer's being dappled with spots, patches, or blotches of different colors. url:http://www.oed.com/ A color pattern quality inhering in a bearer by virtue of the bearer's color pattern in which light and dark colors (for example white and black) are codistributed to create a visual impression. 2010-11-16T11:24:15Z quality PATO:0002275 high contrast color pattern PATO:0002275 A color pattern quality inhering in a bearer by virtue of the bearer's color pattern in which light and dark colors (for example white and black) are codistributed to create a visual impression. PATOC:WD A color pattern inhering in a bearer by virtue of bearer's exhibiting vertical bars of one hue or degree of saturation crossing another. 2010-11-16T11:30:40Z quality PATO:0002276 barred PATO:0002276 A color pattern inhering in a bearer by virtue of bearer's exhibiting vertical bars of one hue or degree of saturation crossing another. PATOC:WD A quality of certain surfaces which appear to change colour as the angle of view changes. 2010-12-12T12:37:41Z quality PATO:0002277 iridescent PATO:0002277 A quality of certain surfaces which appear to change colour as the angle of view changes. url:http://en.wikipedia.org/wiki/Iridescence A structural quality inhering in a bearer by virtue of the bearer's participating in a joint with another entity. 2011-01-20T05:39:18Z quality PATO:0002278 articulated with PATO:0002278 A structural quality inhering in a bearer by virtue of the bearer's participating in a joint with another entity. PATOC:WD A structural quality inhering in a bearer by virtue of the bearer's being strongly articulated with another entity. 2011-01-20T05:39:59Z quality PATO:0002279 tightly articulated with PATO:0002279 A structural quality inhering in a bearer by virtue of the bearer's being strongly articulated with another entity. PATOC:WD A structural quality inhering in a bearer by virtue of the bearer's possessing a broad surface in articulation with another entity. 2011-01-20T05:40:29Z quality PATO:0002280 broadly articulated with PATO:0002280 A structural quality inhering in a bearer by virtue of the bearer's possessing a broad surface in articulation with another entity. PATOC:WD A cuscpidate quality inhering in a bearer by virtue of the bearer possessing two cusps. 2011-02-07T03:13:18Z bicuspid quality PATO:0002281 biscupidate PATO:0002281 A cuscpidate quality inhering in a bearer by virtue of the bearer possessing two cusps. PATOC:GVG A mobility which is relative high. 2011-03-09T09:16:03Z quality PATO:0002282 increased mobility PATO:0002282 A mobility which is relative high. PATO:GVG A mobility which is relative low. 2011-03-09T09:16:47Z quality PATO:0002283 decreased mobility PATO:0002283 A mobility which is relative low. PATOC:GVG A physical quality that pertains by virtue of a pulling force that is directed away from the bearer and attempts to stretch or elongate the bearer. 2011-03-10T08:41:21Z quality PATO:0002284 tension PATO:0002284 A physical quality that pertains by virtue of a pulling force that is directed away from the bearer and attempts to stretch or elongate the bearer. PATOC:GVG Branchiness quality inhering in a bearer by virtue of increasing the degree to which there are subdivisions or offshoots in a bearer entity. 2011-03-10T09:07:57Z quality PATO:0002285 increased branchiness PATO:0002285 Branchiness quality inhering in a bearer by virtue of increasing the degree to which there are subdivisions or offshoots in a bearer entity. PATOC:CVS Branchiness quality inhering in a bearer by virtue of decreasing the degree to which there are subdivisions or offshoots in a bearer entity. 2011-03-10T09:08:37Z quality PATO:0002286 decreased branchiness PATO:0002286 Branchiness quality inhering in a bearer by virtue of decreasing the degree to which there are subdivisions or offshoots in a bearer entity. PATOC:CVS An elasticity which is relatively high. 2011-03-30T11:50:21Z quality PATO:0002287 increased elasticity PATO:0002287 An elasticity which is relatively high. PATOC:GVG An elasticity which is relatively low. 2011-03-30T11:50:39Z quality PATO:0002288 decreased elasticity PATO:0002288 An elasticity which is relatively low. PATOC:GVG A hairy quality inhering in a bearer by virtue of the bearer's being covered with setae. 2011-04-04T08:44:10Z quality PATO:0002289 Setose as a label is used extensively to describe insect phenotypes that have hairy-like appearances (i.e., they are covered in setae, not the hairs of mammals). A bristle is a type of seta. setose PATO:0002289 A hairy quality inhering in a bearer by virtue of the bearer's being covered with setae. ISBN:0913424137 Decreased size or absence of organ, tissue or cell due to a reduction in cell numbers. 2011-04-18T05:11:33Z aplasia/hypoplasia quality PATO:0002290 aplastic/hypoplastic PATO:0002290 Decreased size or absence of organ, tissue or cell due to a reduction in cell numbers. https://orcid.org/0000-0003-4606-0597 Absence of a tissue or organ due to failure to develop. 2011-04-18T05:17:34Z quality PATO:0002291 agenesis PATO:0002291 Absence of a tissue or organ due to failure to develop. PATO:GVG A structural quality inhering in a bearer by virtue of the bearer's underlying structure being capable of change. 2011-05-03T03:01:59Z transient structure quality PATO:0002292 For example, structures undergoing endochondral ossification change in composition from cartilaginous to ossified. transient PATO:0002292 A structural quality inhering in a bearer by virtue of the bearer's underlying structure being capable of change. PATOC:WD A structural quality inhering in a bearer by virtue of the bearer's underlying structure not changing over time. 2011-05-03T03:03:50Z permanent structure quality PATO:0002293 permanent PATO:0002293 A structural quality inhering in a bearer by virtue of the bearer's underlying structure not changing over time. PATOC:WD A texture that is uniformly covered in short, oblong, or trench-like depressions. 2011-05-03T03:12:47Z quality PATO:0002294 scrobiculate PATO:0002294 A texture that is uniformly covered in short, oblong, or trench-like depressions. Book:Book A surface feature shape inhering in a surface by virtue of the bearer's being divided by ridge-like structures into a number of small, irregular spaces. 2011-05-17T07:57:45Z quality PATO:0002295 areolate PATO:0002295 A surface feature shape inhering in a surface by virtue of the bearer's being divided by ridge-like structures into a number of small, irregular spaces. Book:Book A texture quality inhering in a surface by virtue of the bearer's being marked by the presence of small, shallow, regular depressions called fovae. 2011-05-17T07:59:30Z quality foveolate pitted PATO:0002296 foveate PATO:0002296 A texture quality inhering in a surface by virtue of the bearer's being marked by the presence of small, shallow, regular depressions called fovae. Book:Book A cellular motility which is lower relative to the normal or average. quality PATO:0002297 decreased cellular motility PATO:0002297 A cellular motility which is lower relative to the normal or average. PATOC:GVG A cellular motility which is higher relative to the normal or average. quality PATO:0002298 increased cellular motility PATO:0002298 A cellular motility which is higher relative to the normal or average. PATOC:GVG A cylindrical shape that is hollow. 2011-06-08T06:33:50Z tube like tube-shaped tubulate quality PATO:0002299 tubular PATO:0002299 A cylindrical shape that is hollow. PATOC:GVG A quality that has a value that is increased compared to normal or average. 2011-06-16T06:39:43Z quality PATO:0002300 increased quality PATO:0002300 A quality that has a value that is increased compared to normal or average. PATOC:GVG A quality that has a value that is decreased compared to normal or average. 2011-06-16T06:40:15Z quality PATO:0002301 decreased quality PATO:0002301 A quality that has a value that is decreased compared to normal or average. PATOC:GVG A quality of a process that has a value that is decreased compared to normal or average. 2011-06-16T06:50:59Z quality PATO:0002302 decreased process quality PATO:0002302 A quality of a process that has a value that is decreased compared to normal or average. PATOC:GVG A quality of an object that has a value that is decreased compared to normal or average. 2011-06-16T06:51:54Z quality PATO:0002303 decreased object quality PATO:0002303 A quality of an object that has a value that is decreased compared to normal or average. PATOC:GVG A quality of a process that has a value that is increased compared to normal or average. 2011-06-16T06:53:08Z quality PATO:0002304 increased process quality PATO:0002304 A quality of a process that has a value that is increased compared to normal or average. PATOC:GVG A quality of an object that has a value that is increased compared to normal or average. 2011-06-16T06:54:01Z quality PATO:0002305 increased object quality PATO:0002305 A quality of an object that has a value that is increased compared to normal or average. PATOC:GVG A triangular quality inhering in a bearer by virtue of the bearer's having all sides of the same length. 2011-06-27T11:22:50Z quality PATO:0002306 equilateral triangular PATO:0002306 A triangular quality inhering in a bearer by virtue of the bearer's having all sides of the same length. PATOC:JB A triangular quality inhering in a bearer by virtue of the bearer's having two sides have the same length. 2011-06-27T11:23:52Z quality PATO:0002307 isosceles triangular PATO:0002307 A triangular quality inhering in a bearer by virtue of the bearer's having two sides have the same length. PATOC:JB A triangular quality inhering in a bearer by virtue of the bearer's having all sides of unequal length. 2011-06-27T11:24:24Z quality PATO:0002308 scalene triangular PATO:0002308 A triangular quality inhering in a bearer by virtue of the bearer's having all sides of unequal length. PATOC:JB A convex 3-D shape quality inhering in a bearer by virtue of the bearer's exhibiting a by virtue of the bearer's exhibiting a consistently sized and approximately round cross-section along its length, which is many times larger than its diameter. 2011-09-09T04:50:10Z quality PATO:0002309 Note that a fiber shaped object may take any circuitous or straight path through space (think of a length of string or rope). fiber shaped PATO:0002309 A convex 3-D shape quality inhering in a bearer by virtue of the bearer's exhibiting a by virtue of the bearer's exhibiting a consistently sized and approximately round cross-section along its length, which is many times larger than its diameter. PATOC:DC A quality inhering in a bearer by virtue of the bearer's being strong, thick or sturdy. 2011-09-20T06:23:31Z quality PATO:0002310 robust PATO:0002310 A quality inhering in a bearer by virtue of the bearer's being strong, thick or sturdy. PATOC:BF Having a fringe or border of hairlike or fingerlike projections. 2011-09-22T03:52:11Z quality PATO:0002311 fimbriated PATO:0002311 Having a fringe or border of hairlike or fingerlike projections. PATO:WS Consisting of segments or similar parts arranged in a longitudinal series. 2011-10-03T03:42:23Z quality PATO:0002312 segmented PATO:0002312 Consisting of segments or similar parts arranged in a longitudinal series. OED: Having or resembling the shape of a telescope. 2011-10-03T03:49:26Z quality PATO:0002313 telescopic PATO:0002313 Having or resembling the shape of a telescope. PATOC:BF Having the nature or characteristic of, a ligament; composed of the tissue proper to ligaments. 2011-10-03T03:57:39Z quality PATO:0002314 ligamentous PATO:0002314 Having the nature or characteristic of, a ligament; composed of the tissue proper to ligaments. PATOC:BF A shape quality inhering in a bearer by virtue of the bearer's resembling the end of a brush with a multitude of bristles. 2011-10-03T03:59:59Z quality PATO:0002315 brush-like shape PATO:0002315 A shape quality inhering in a bearer by virtue of the bearer's resembling the end of a brush with a multitude of bristles. PATOC:BF Being separate or discrete from other skeletal elements. 2011-10-03T04:17:08Z quality free PATO:0002316 autogenous PATO:0002316 Being separate or discrete from other skeletal elements. PATOC:WD A convex quadrilateral is a parallelogram if and only if any one of the following statements are true: 1. Each diagonal divides the quadrilateral into two congruent triangles with the same orientation. 2. The opposite sides are congruent in pairs. 3. The diagonals bisect each other. 4. The opposite angles are congruent in pairs. 5. The sum of the squares of the sides equals the sum of the squares of the diagonals. (This is the parallelogram law) 6.It possesses rotational symmetry. 7.One pair of opposite sides are parallel and congruent. 8.Two pairs of adjacent angles are supplementary. 2011-10-12T12:33:07Z quality PATO:0002317 parallelogram PATO:0002317 A convex quadrilateral is a parallelogram if and only if any one of the following statements are true: 1. Each diagonal divides the quadrilateral into two congruent triangles with the same orientation. 2. The opposite sides are congruent in pairs. 3. The diagonals bisect each other. 4. The opposite angles are congruent in pairs. 5. The sum of the squares of the sides equals the sum of the squares of the diagonals. (This is the parallelogram law) 6.It possesses rotational symmetry. 7.One pair of opposite sides are parallel and congruent. 8.Two pairs of adjacent angles are supplementary. wikipedia:Parallelogram A shape constituting a transition between a rectangle and a circle; a closed curve, of which the circle and ellipse are special cases, whose parametric equation is x = a.cos2/rt, y = b.cos2/rt 2011-10-12T12:45:16Z Lamé curve quality PATO:0002318 superelliptic PATO:0002318 A shape constituting a transition between a rectangle and a circle; a closed curve, of which the circle and ellipse are special cases, whose parametric equation is x = a.cos2/rt, y = b.cos2/rt wiktionary:superellipse A shape with properties between those of a square and those of a circle. 2011-10-12T12:47:48Z quality PATO:0002319 squircle PATO:0002319 A shape with properties between those of a square and those of a circle. wikipedia:Squircle A superelliptic shape inhering in a bearer by virtue of the bearer's shape resembling a diamond. 2011-10-12T12:49:06Z quality PATO:0002320 diamond shaped PATO:0002320 A superelliptic shape inhering in a bearer by virtue of the bearer's shape resembling a diamond. PATO:WC 2011-10-12T12:50:59Z quality PATO:0002321 hypoelliptic PATO:0002321 2011-10-12T12:51:19Z quality PATO:0002322 hyperelliptic PATO:0002322 A temporal distribution pattern of process occurrences within a regulation/reference process. 2011-11-22T01:12:28Z quality PATO:0002323 temporal distribution quality PATO:0002323 A temporal distribution pattern of process occurrences within a regulation/reference process. PATOC:LC The temporal relation between the end of the process with respect to a reference process. 2011-11-23T11:46:00Z quality completeness extent PATO:0002324 offset quality PATO:0002324 The temporal relation between the end of the process with respect to a reference process. PATOC:LC completeness GOC:CJM extent GOC:CJM The temporal relation between the start of the process with respect to a reference process. 2011-11-23T11:47:34Z quality initiation PATO:0002325 onset quality PATO:0002325 The temporal relation between the start of the process with respect to a reference process. PATOC:LC An orientation inhering in a bearer by virtue of the bearer's placement at an angle. 2011-11-23T12:06:09Z quality PATO:0002326 angle PATO:0002326 An orientation inhering in a bearer by virtue of the bearer's placement at an angle. PATOC:GVG An angle which is relatively high. 2011-11-23T12:06:38Z quality PATO:0002327 increased angle to PATO:0002327 An angle which is relatively high. PATOC:GVG An angle which is relatively low. 2011-11-23T12:06:54Z quality PATO:0002328 decreased angle to PATO:0002328 An angle which is relatively low. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's exhibiting a upward bending of its leaves or other plant parts. 2012-01-31T11:40:23Z quality PATO:0002329 hyponastic PATO:0002329 A shape quality inhering in a bearer by virtue of the bearer's exhibiting a upward bending of its leaves or other plant parts. PATOC:DS A quality inhering in a bearer by virtue of the bearer's being extended along a straight line, and is shaped like a reversed lance-point, with the tapering point attached to the leafstalk. 2012-01-31T11:57:54Z quality PATO:0002330 oblanceolate PATO:0002330 A quality inhering in a bearer by virtue of the bearer's being extended along a straight line, and is shaped like a reversed lance-point, with the tapering point attached to the leafstalk. PATOC:PG A physical quality inhering in a bearer by virtue of the bearer exhibiting molecular attraction to another entity in contact. 2012-01-31T12:28:16Z quality resinous PATO:0002331 adhesive PATO:0002331 A physical quality inhering in a bearer by virtue of the bearer exhibiting molecular attraction to another entity in contact. PATOC:GVG A physical quality inhering in a bearer by virtue of the bearer not exhibiting molecular attraction to another entity in contact. 2012-01-31T12:28:57Z quality non-resinous PATO:0002332 non-adhesive PATO:0002332 A physical quality inhering in a bearer by virtue of the bearer not exhibiting molecular attraction to another entity in contact. PATOC:GVG A adhesivity which is relatively high. 2012-01-31T12:32:43Z quality PATO:0002333 increased adhesivity PATO:0002333 A adhesivity which is relatively high. PATOC:GVG A adhesivity which is relatively low. 2012-01-31T12:42:22Z quality PATO:0002334 decreased adhesivity PATO:0002334 A adhesivity which is relatively low. PATOC:GVG A shape quality inhering in a bearer by virtue of the bearer's being dome-shaped. 2012-01-31T02:32:14Z quality PATO:0002335 tholiform PATO:0002335 A shape quality inhering in a bearer by virtue of the bearer's being dome-shaped. PATOC:dd A shape quality inhering in a bearer by virtue of the bearer's having triangular faces that meet at a common point and containing a polygonal shaped base. 2012-01-31T02:35:02Z quality PATO:0002336 pyramidal PATO:0002336 A shape quality inhering in a bearer by virtue of the bearer's having triangular faces that meet at a common point and containing a polygonal shaped base. PATOC:DD A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting a continuous convex surface with an axis of symmetry and one axis longer than the other; characterized with an egg-shaped form crossed with a lance-head shaped form. 2012-01-31T02:43:15Z quality PATO:0002337 lance-ovate PATO:0002337 A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting a continuous convex surface with an axis of symmetry and one axis longer than the other; characterized with an egg-shaped form crossed with a lance-head shaped form. PATOC:DD A shape quality inhering in a bearer by virtue of the bearer's being shaped like a lance-head, considerably longer than wide, tapering towards the tip from below the middle together forming three angles; attached at the broad end. 2012-01-31T02:46:43Z quality PATO:0002338 lanceolate-triangular PATO:0002338 A shape quality inhering in a bearer by virtue of the bearer's being shaped like a lance-head, considerably longer than wide, tapering towards the tip from below the middle together forming three angles; attached at the broad end. PATOC:DD A quality of being covered with stiff or rough hairs. 2012-01-31T02:51:37Z quality PATO:0002339 hispid PATO:0002339 A quality of being covered with stiff or rough hairs. PATOC:GVG A quality of being minutely hispid. 2012-01-31T02:53:21Z quality PATO:0002340 hispidulous PATO:0002340 A quality of being minutely hispid. PATOC:DD A quality of being covered with short, dense, matted hairs. 2012-01-31T02:55:56Z quality PATO:0002341 tomentose PATO:0002341 A quality of being covered with short, dense, matted hairs. thefreedictionary:www.thefreedictionary.com A quality inhering in a bearer by virtue of the bearer's being a cupule, with a structure similar to a cup that also encloses the ovule in partiality. 2012-01-31T02:59:07Z quality PATO:0002342 cupulate PATO:0002342 A quality inhering in a bearer by virtue of the bearer's being a cupule, with a structure similar to a cup that also encloses the ovule in partiality. PATOC:DD A positional quality inhering in a bearer by virtue of the bearer's lying or growing on the ground but with erect or rising tips. 2012-01-31T03:13:12Z quality PATO:0002343 decumbent PATO:0002343 A positional quality inhering in a bearer by virtue of the bearer's lying or growing on the ground but with erect or rising tips. thefreedictionary:www.thefreedictionary.com A quality inhering in a bearer by virtue of the bearer's being characterized by fine, entangled hairs giving the appearance of cobweb. 2012-01-31T03:49:00Z quality PATO:0002344 arachnose PATO:0002344 A quality inhering in a bearer by virtue of the bearer's being characterized by fine, entangled hairs giving the appearance of cobweb. PATOC:DD A convex 3-D shape quality inhering in a bearer by virtue of the bearer's having a quadric surface in three dimensions obtained by rotating less than half of a circular arc about an axis passing through the endpoints of the arc 2012-01-31T03:55:16Z quality PATO:0002345 lemon-shaped PATO:0002345 A convex 3-D shape quality inhering in a bearer by virtue of the bearer's having a quadric surface in three dimensions obtained by rotating less than half of a circular arc about an axis passing through the endpoints of the arc PATOC:MH A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having two connected parts, roughly spherical, of different sizes. 2012-01-31T03:58:10Z quality PATO:0002346 snowman-shaped PATO:0002346 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having two connected parts, roughly spherical, of different sizes. PATOC:MH A conical quality inhering in a bearer by virtue of the bearer's resembling a cone, with the pointed end attached to an organism. 2012-01-31T04:05:28Z quality PATO:0002347 obconical PATO:0002347 A conical quality inhering in a bearer by virtue of the bearer's resembling a cone, with the pointed end attached to an organism. wiktionary:http://en.wiktionary.org/wiki/obconical A structural quality inhering in a bearer by virtue of the bearer resembling wood. 2012-01-31T04:06:50Z quality PATO:0002348 ligneous PATO:0002348 A structural quality inhering in a bearer by virtue of the bearer resembling wood. merriam-webster:http://www.merriam-webster.com/dictionary/ligneous A spatial quality inhering in a bearer by virtue of the bearer's being located toward the base of an organism relative to another entity. 2012-01-31T04:12:25Z quality PATO:0002349 basal to PATO:0002349 A spatial quality inhering in a bearer by virtue of the bearer's being located toward the base of an organism relative to another entity. merriam-webster:http://www.merriam-webster.com/dictionary/basal A spatial quality inhering in a bearer by virtue of the bearer's being located toward the stalk of an organism relative to another entity. 2012-01-31T04:13:06Z quality PATO:0002350 cauline to PATO:0002350 A spatial quality inhering in a bearer by virtue of the bearer's being located toward the stalk of an organism relative to another entity. merriam-webster:http://www.merriam-webster.com/dictionary/cauline A structural quality inhering in a bearer by virtue of the bearer resembling or containing flesh. 2012-01-31T04:15:30Z quality PATO:0002351 fleshy PATO:0002351 A structural quality inhering in a bearer by virtue of the bearer resembling or containing flesh. wiktionary:http://en.wiktionary.org/wiki/fleshy A quality inhering in a bearer by virtue of the bearer's upper parts die back to the rootstock at the end of the growing season. 2012-01-31T04:29:36Z quality PATO:0002352 herbaceous PATO:0002352 A quality inhering in a bearer by virtue of the bearer's upper parts die back to the rootstock at the end of the growing season. PATOC:PG A quality that inheres in a bearer in virtue of its realizing one of its functions. 2012-01-31T04:51:42Z quality PATO:0002353 activation quality PATO:0002353 A quality that inheres in a bearer in virtue of its realizing one of its functions. PATOC:RH A quality of an physical object that is currently realizing one of its functions. 2012-01-31T04:52:04Z quality PATO:0002354 active PATO:0002354 A quality of an physical object that is currently realizing one of its functions. PATOC:RH A quality of a physical object that is currently realizing none of its functions. 2012-01-31T04:52:14Z quality PATO:0002355 inactive PATO:0002355 A quality of a physical object that is currently realizing none of its functions. PATOC:RH A quality of a physical object that has been constantly realizing some of its functions. 2012-01-31T04:52:24Z quality PATO:0002356 constitutively active PATO:0002356 A quality of a physical object that has been constantly realizing some of its functions. PATOC:RH A shape quality inhering in a bearer by virtue of the bearer's having a strait side and an arched side giving the bearer the form of the letter D. 2012-02-21T11:46:51Z quality PATO:0002357 D-shaped PATO:0002357 A shape quality inhering in a bearer by virtue of the bearer's having a strait side and an arched side giving the bearer the form of the letter D. PATOC:AE An elongated raised margin or border. 2012-02-21T12:27:39Z ridge-like quality PATO:0002358 ridged PATO:0002358 An elongated raised margin or border. PATOC:GVG A quality inhering in a bearer by virtue of the bearer's width being notably higher than its length. 2012-03-13T06:04:00Z quality PATO:0002359 broad PATO:0002359 A quality inhering in a bearer by virtue of the bearer's width being notably higher than its length. PATOC:GVG A disposition that can be compared on a linear scale - that is that it can be increased or decreased. 2012-03-16T06:31:50Z quality PATO:0002360 tendency PATO:0002360 A disposition that can be compared on a linear scale - that is that it can be increased or decreased. PATOC:RH A tendency which is relatively high. 2012-03-16T06:31:57Z quality PATO:0002361 increased tendency PATO:0002361 A tendency which is relatively high. PATOC:GVG A tendency which is relatively low. 2012-03-16T06:32:57Z quality PATO:0002362 decreased tendency PATO:0002362 A tendency which is relatively low. PATOC:GVG A medium brown color with a metallic sheen, resembles the actual alloy bronze. 2012-05-03T11:08:18Z quality PATO:0002363 bronze PATO:0002363 A medium brown color with a metallic sheen, resembles the actual alloy bronze. PATO:LC A quality inhering in a bearer by virtue of the bearer's length being notably lower than its width. 2012-04-18T06:31:29Z quality PATO:0002364 shortened PATO:0002364 A quality inhering in a bearer by virtue of the bearer's length being notably lower than its width. PATOC:GVG Female quality of having complete, unaltered reproductive organs 2012-05-03T11:18:41Z quality PATO:0002365 intact female PATO:0002365 Female quality of having complete, unaltered reproductive organs PATOC:MF Male quality of having complete, unaltered reproductive organs. 2012-05-03T11:19:06Z quality PATO:0002366 intact male PATO:0002366 Male quality of having complete, unaltered reproductive organs. PATOC:MF Male quality of being incapable to reproduce because of functional loss of the testicles from surgical removal or chemical means. 2012-05-03T11:22:29Z quality PATO:0002367 castrated male PATO:0002367 Male quality of being incapable to reproduce because of functional loss of the testicles from surgical removal or chemical means. PATOC:MF A viviparous organism having never given birth. 2012-05-03T11:25:25Z quality PATO:0002368 nulliparous PATO:0002368 A viviparous organism having never given birth. PATOC:mf A viviparous organism that has given birth two or more times. 2012-05-03T11:26:34Z quality PATO:0002369 multiparous PATO:0002369 A viviparous organism that has given birth two or more times. wiki:http://en.wikipedia.org/wiki/Parity_(biology) The number of time that a viviparous organism has given birth. 2012-05-03T11:27:56Z quality PATO:0002370 parity PATO:0002370 The number of time that a viviparous organism has given birth. wiki:http://en.wikipedia.org/wiki/Parity_(biology) A viviparous organism having given birth one time. 2012-05-03T11:29:38Z quality PATO:0002371 primiparous PATO:0002371 A viviparous organism having given birth one time. wiki:http://en.wikipedia.org/wiki/Parity_(biology) A viviparous organism that has given birth five or more times. 2012-05-03T11:30:28Z quality PATO:0002372 grand multiparous PATO:0002372 A viviparous organism that has given birth five or more times. wiki:http://en.wikipedia.org/wiki/Parity_(biology) A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along the mediolateral axis. 2012-07-05T01:49:04Z quality PATO:0002373 mediolateral polarity PATO:0002373 A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along the mediolateral axis. PATOC:DS Recurrent and often more or less cyclic alteration. 2012-07-05T01:52:36Z quality PATO:0002374 fluctuating PATO:0002374 Recurrent and often more or less cyclic alteration. PATOC:DS A concave 3-D shape quality inhering in a bearer by virtue of the bearer's shape form resembling the shape of a trumpet. 2012-07-05T02:45:17Z quality PATO:0002375 trumpet-shaped PATO:0002375 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's shape form resembling the shape of a trumpet. PATOC:DS A structure quality inhering in a bearer by virtue of the bearer's being filled with air. 2012-07-05T02:55:10Z air-filled quality PATO:0002376 inflated PATO:0002376 A structure quality inhering in a bearer by virtue of the bearer's being filled with air. PATOC:CVS A structure quality inhering in a bearer by virtue of the bearer's being not filed with air. 2012-07-05T02:56:07Z quality PATO:0002377 uninflated PATO:0002377 A structure quality inhering in a bearer by virtue of the bearer's being not filed with air. PATOC:CVS Having a shape that resembles a many-lobed "berry," such as a raspberry. 2012-07-05T02:58:05Z quality PATO:0002378 acinus PATO:0002378 Having a shape that resembles a many-lobed "berry," such as a raspberry. wikipedia:https://en.wikipedia.org/wiki/Acinus A female fertility quality inhering in a female by virtue of the bearer's not being capable of reproducing because of surgical removal of ovaries and uterus. 2012-07-05T03:04:28Z quality PATO:0002379 ovariohysterectomized female PATO:0002379 A female fertility quality inhering in a female by virtue of the bearer's not being capable of reproducing because of surgical removal of ovaries and uterus. PATOC:MF A female fertility quality inhering in a female by virtue of the bearer's not being capable of reproducing because of surgical removal of ovaries. 2012-07-05T03:06:12Z quality PATO:0002380 ovariectomized female PATO:0002380 A female fertility quality inhering in a female by virtue of the bearer's not being capable of reproducing because of surgical removal of ovaries. PATOC:MF A composition quality inhering in an bearer by virtue of the presence of long chain aliphatic lipids on the surface of an organism. 2012-07-05T03:17:00Z quality PATO:0002381 waxiness PATO:0002381 A composition quality inhering in an bearer by virtue of the presence of long chain aliphatic lipids on the surface of an organism. PATOC:lm A waxiness which is relatively high. 2012-07-05T03:18:03Z quality PATO:0002382 increased waxiness PATO:0002382 A waxiness which is relatively high. PATOC:GVG A waxiness which is relatively low. 2012-07-05T03:18:14Z quality PATO:0002383 decreased waxiness PATO:0002383 Presence of long chain aliphatic lipids on the surface of an organism. 2012-07-05T03:18:21Z quality PATO:0002384 waxy PATO:0002384 Presence of long chain aliphatic lipids on the surface of an organism. PATOC:lm A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines, usually parallel, with at least one salient angle on the margin 2012-07-05T05:17:07Z quality PATO:0002385 striate-angular PATO:0002385 A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines, usually parallel, with at least one salient angle on the margin FNA:FNA A concave 3-D shape that inheres in the bearer by virtue of the bearer's shape that is wider at one end and narrow in the middle. 2012-07-23T03:13:41Z anvil shaped quality PATO:0002386 anvil PATO:0002386 A concave 3-D shape that inheres in the bearer by virtue of the bearer's shape that is wider at one end and narrow in the middle. PATOC:AD Extremely acute and aggressive onset of a pathological process. 2012-09-15T02:57:46Z per-acute quality PATO:0002387 peracute PATO:0002387 Extremely acute and aggressive onset of a pathological process. PATOC:PNS Being supported by a peduncle or stalk. 2012-10-12T01:10:41Z quality PATO:0002388 pedunculate PATO:0002388 Being supported by a peduncle or stalk. PATOC:GV Growing horizontal to the ground without setting roots. 2012-10-12T01:33:50Z quality PATO:0002389 procumbent PATO:0002389 Growing horizontal to the ground without setting roots. PATO:PG A length quality which is equal to the length of any straight line segment that passes from the center of a circle to any endpoint on the circular boundary. The radius is half of the diameter. 2012-11-15T05:17:15Z quality PATO:0002390 radius PATO:0002390 A length quality which is equal to the length of any straight line segment that passes from the center of a circle to any endpoint on the circular boundary. The radius is half of the diameter. PATO:DS A shape quality inhering in a bearer by virtue of the bearer's having three rays or radiating branches. 2012-11-15T05:19:32Z quality PATO:0002391 triradiate PATO:0002391 A shape quality inhering in a bearer by virtue of the bearer's having three rays or radiating branches. merriam-webster:merriam-webster A spatial quality inhering in a bearer by virtue of the bearer's being located on a sloping line joining two nonconsecutive points of an entity relative to another entity. 2012-11-15T05:21:51Z quality PATO:0002392 diagonal to PATO:0002392 A spatial quality inhering in a bearer by virtue of the bearer's being located on a sloping line joining two nonconsecutive points of an entity relative to another entity. PATOC:GVG A tolerance quality inhering in a bearer by virtue of the bearer's increased ability to endure a stimulus. 2012-11-15T05:32:07Z quality PATO:0002393 increased tolerance to PATO:0002393 A tolerance quality inhering in a bearer by virtue of the bearer's increased ability to endure a stimulus. PATOC:LC A tolerance quality inhering in a bearer by virtue of the bearer's decreased ability to endure a stimulus. 2012-11-15T05:33:05Z quality PATO:0002394 decreased tolerance to PATO:0002394 A tolerance quality inhering in a bearer by virtue of the bearer's decreased ability to endure a stimulus. PATOC:LC A positional quality inhering in a bearer by virtue of the bearer's being positioned away from the axis of an organism. 2012-11-20T04:13:32Z quality PATO:0002395 mislocalized abaxially PATO:0002395 A positional quality inhering in a bearer by virtue of the bearer's being positioned away from the axis of an organism. PATOC:EH A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the axis of an organism. 2012-11-20T04:15:12Z quality PATO:0002396 mislocalized adaxially PATO:0002396 A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the axis of an organism. PATOC:EH A circular shape quality inhering in a bearer by virtue of the bearer's being nearly, but not perfectly, circular. 2012-12-07T05:32:18Z quality round rounded PATO:0002397 subcircular PATO:0002397 A circular shape quality inhering in a bearer by virtue of the bearer's being nearly, but not perfectly, circular. PATOC:AD 2012-12-07T05:34:16Z quality PATO:0002398 obsolete <new term> true PATO:0002398 A rotation quality inhering in a bearer by virtue of being rotated towards the front and the middle of an organism. 2012-12-07T05:41:01Z quality PATO:0002399 anteromedially rotated PATO:0002399 A rotation quality inhering in a bearer by virtue of being rotated towards the front and the middle of an organism. PATOC:JI Having a spindle-like shape that is wide in the middle and tapers at both ends. 2012-12-07T05:43:25Z quality PATO:0002400 fusiform PATO:0002400 Having a spindle-like shape that is wide in the middle and tapers at both ends. wikipedia:wikipedia characterised by an unidentifiable pattern. 2012-12-17T10:37:55Z quality PATO:0002401 random pattern PATO:0002401 characterised by an unidentifiable pattern. PATOC:MPATH Multiple lesions some interconnecting with each other. 2012-12-17T10:40:18Z quality PATO:0002402 multifocal to coalescing PATO:0002402 Multiple lesions some interconnecting with each other. PATOC:MPATH Affecting all regions without specificity of distribution. 2012-12-17T10:41:37Z generalised quality PATO:0002403 generalized PATO:0002403 Affecting all regions without specificity of distribution. PATOC:MPTH Affecting a segment or segments. 2012-12-17T10:43:13Z quality PATO:0002404 segmental PATO:0002404 Affecting a segment or segments. PATOC:MPATH A structural quality inhering in a bearer by virtue of the bearer's disposition to be reduced to smaller pieces with little effort. 2012-12-17T10:47:16Z quality PATO:0002405 friability PATO:0002405 A structural quality inhering in a bearer by virtue of the bearer's disposition to be reduced to smaller pieces with little effort. Wikipedia:https://en.wikipedia.org/wiki/Friability Easily reduced to powder or easily fragmentable or crumbly. 2012-12-17T10:48:30Z quality PATO:0002406 friable PATO:0002406 Easily reduced to powder or easily fragmentable or crumbly. PATOC:MPATH Having become firm or hard especially by increase of fibrous elements. 2012-12-17T10:49:11Z quality PATO:0002407 indurated PATO:0002407 Having become firm or hard especially by increase of fibrous elements. mw:http://www.merriam-webster.com/dictionary/indurated Having the consistency of water. 2012-12-17T10:51:32Z quality PATO:0002408 watery PATO:0002408 Having the consistency of water. PATOC:MPATH Bounded structure filled with fluid. 2012-12-17T10:53:18Z quality PATO:0002409 fluid-filled PATO:0002409 Bounded structure filled with fluid. PATOC:MPATH A colour that is very pale yellowish brown. 2012-12-17T10:54:55Z quality PATO:0002410 beige PATO:0002410 A colour that is very pale yellowish brown. PATOC:MPATH A color consisting of yellow and brown hue. 2012-12-17T10:55:51Z quality PATO:0002411 yellow brown PATO:0002411 A color consisting of yellow and brown hue. PATOC:GVG A color consisting of yellow and brown hue and low brightness. 2012-12-17T10:56:22Z quality PATO:0002412 dark yellow brown PATO:0002412 A color consisting of yellow and brown hue and low brightness. PATOC:GVG A color consisting of yellow and brown hue and high brightness. 2012-12-17T10:57:27Z quality PATO:0002413 light yellow brown PATO:0002413 A color consisting of yellow and brown hue and high brightness. PATOC:GVG A quality of duration having progressive course of indefinite duration with active, acute-like elements. 2012-12-17T10:59:58Z quality PATO:0002414 chronic-active PATO:0002414 A quality of duration having progressive course of indefinite duration with active, acute-like elements. PATOC:MPATH Single lesion with expansion into surrounding tissue. 2012-12-17T11:01:31Z quality PATO:0002415 focally extensive PATO:0002415 Single lesion with expansion into surrounding tissue. PATOC:MPATH Flattened from above downward; below the normal level or the level of the surrounding parts. 2012-12-17T12:06:55Z quality PATO:0002416 sunken PATO:0002416 Flattened from above downward; below the normal level or the level of the surrounding parts. PATOC:MPATH Extending through or affecting the entire thickness of the wall of an organ or cavity or boundary. 2012-12-17T02:16:18Z quality PATO:0002417 transmural PATO:0002417 Extending through or affecting the entire thickness of the wall of an organ or cavity or boundary. PATOC:MPATH An affinity inhering in an anatomical structure by virtue of the bearer exhibiting a molecular interaction for acidic dyes under specific pH conditions. 2012-12-17T03:01:19Z eosinophilic quality PATO:0002418 Eosin stains acidophilic structures, hence eosinophilic is the same as acidophilic. acidophilic PATO:0002418 An affinity inhering in an anatomical structure by virtue of the bearer exhibiting a molecular interaction for acidic dyes under specific pH conditions. PATOC:GVG OBSOLETE. An affinity inhering in an anatomical structure by virtue of the bearer exhibiting a molecular interaction for eosin dye. 2012-12-17T03:02:09Z quality PATO:0002419 Eosin stains acidophilic structures, hence eosinophilic is the same as acidophilic. See https://github.com/pato-ontology/pato/issues/471 obsolete eosinophilic true PATO:0002419 OBSOLETE. An affinity inhering in an anatomical structure by virtue of the bearer exhibiting a molecular interaction for eosin dye. PATOC:GVG Having both hydrophilic and hydrophobic (or lipophilic) groups. 2012-12-17T03:04:39Z quality PATO:0002420 amphiphilic PATO:0002420 Having both hydrophilic and hydrophobic (or lipophilic) groups. wikipedia:http://en.wiktionary.org/wiki/amphiphilic Having or resembling the characteristic of a cicatrix - a scar resulting from formation and contraction of fibrous tissue. 2012-12-17T03:08:09Z quality PATO:0002421 cicatricial PATO:0002421 Having or resembling the characteristic of a cicatrix - a scar resulting from formation and contraction of fibrous tissue. mw:http://www.merriam-webster.com/dictionary/cicatricial Pertaining to the individual parts making up an aggregate fruit like a many-lobed "berry," such as a raspberry. 2012-12-17T03:11:10Z quality PATO:0002422 Acinus is Latin for berry. acinar PATO:0002422 Pertaining to the individual parts making up an aggregate fruit like a many-lobed "berry," such as a raspberry. wikipedia:https://en.wikipedia.org/wiki/Acinus A round or lobulated protruding form resembling a nipple. 2012-12-17T03:13:44Z quality PATO:0002423 papillomatous PATO:0002423 A round or lobulated protruding form resembling a nipple. PATOC:MPATH A positional quality inhering in a bearer by virtue of the bearer's having two or more entities that extend from a common point in different directions. 2012-12-20T11:43:47Z quality PATO:0002424 divergent from PATO:0002424 A positional quality inhering in a bearer by virtue of the bearer's having two or more entities that extend from a common point in different directions. PATOC:AD Open to view or not covered by another entity. 2012-12-20T11:47:16Z quality PATO:0002425 exposed PATO:0002425 Open to view or not covered by another entity. PATOC:WD A shape quality inhering in a bearer by virtue of the bearer's being shaped like a boat. 2013-01-29T09:12:03Z quality PATO:0002426 scaphoid PATO:0002426 A shape quality inhering in a bearer by virtue of the bearer's being shaped like a boat. wordnetweb:wordnetweb A surface feature shape having numerous very small circular rounded projections or protuberances. 2013-01-29T09:15:53Z quality PATO:0002427 knobbled PATO:0002427 A surface feature shape having numerous very small circular rounded projections or protuberances. thefreedictionary.com:thefreedictionary.com A 3-D shape with three supports or legs. 2013-01-29T09:18:44Z quality PATO:0002428 tripodal PATO:0002428 A 3-D shape with three supports or legs. PATOC:WC A shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter X. 2013-01-29T09:19:53Z quality PATO:0002429 x-shaped PATO:0002429 A shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter X. PATOC:WC A shape quality in which the bearer is shaped like a narrow band; ligulate. 2013-01-29T09:21:17Z quality PATO:0002430 strap-shaped PATO:0002430 A shape quality in which the bearer is shaped like a narrow band; ligulate. thefreedictionary:thefreedictionary A shape quality in which the bearer possesses a gradual, yet distinct, thinning from a wide starting point. 2013-01-29T09:24:46Z quality PATO:0002431 waisted PATO:0002431 A shape quality in which the bearer possesses a gradual, yet distinct, thinning from a wide starting point. PATOC:WC A shape that is in the form of a spade. 2013-01-29T09:26:49Z quality PATO:0002432 spade-shaped PATO:0002432 A shape that is in the form of a spade. PATOC:WC A surface feature shape marked by large amounts of relief, often with multiple ridges and grooves in close association. Topographically complex. 2013-01-29T09:27:55Z quality PATO:0002433 sculpted surface PATO:0002433 A surface feature shape marked by large amounts of relief, often with multiple ridges and grooves in close association. Topographically complex. PATOC:AD A spatial quality inhering in a bearer by virtue of the bearer's being located at a right angle relative to another entity. 2013-01-29T09:29:55Z quality PATO:0002434 perpendicular to PATO:0002434 A spatial quality inhering in a bearer by virtue of the bearer's being located at a right angle relative to another entity. PATOC:WC A positional quality inhering in a bearer by virtue of the bearer touching another entity along a border or with a projecting part. 2013-01-29T09:31:12Z abut quality PATO:0002435 abutting PATO:0002435 A positional quality inhering in a bearer by virtue of the bearer touching another entity along a border or with a projecting part. merriam-webster:merriam-webster A positional quality inhering in a bearer by virtue of the bearer's position being displaced from a reference point. 2013-01-29T09:32:22Z quality PATO:0002436 offset PATO:0002436 A positional quality inhering in a bearer by virtue of the bearer's position being displaced from a reference point. PATOC:AD A structural quality inhering in a bearer by virtue of the bearer's being locked together or interconnected to another entity. 2013-01-29T09:37:13Z quality PATO:0002437 interlocked with PATO:0002437 A structural quality inhering in a bearer by virtue of the bearer's being locked together or interconnected to another entity. merriam-webster:merriam-webster A structural quality inhering in a bearer by virtue of the bearer's being located or placed beneath the skin. 2013-01-29T09:41:50Z subcutaneous quality PATO:0002438 subdermal PATO:0002438 A structural quality inhering in a bearer by virtue of the bearer's being located or placed beneath the skin. thefreedictionary:thefreedictionary An angular shape quality inhering in a bearer by virtue of the bearer's having two angles in its length giving the bearer the form of the letter W. 2013-01-29T09:45:54Z quality PATO:0002439 w-shaped PATO:0002439 An angular shape quality inhering in a bearer by virtue of the bearer's having two angles in its length giving the bearer the form of the letter W. PATOC:WC A surface feature shape quality inhering in a bearer by virtue of the degree of the bearer's highly topographical with ridges, pits, rugosity or other surface structures. 2013-01-29T10:57:42Z quality PATO:0002440 ornamentation PATO:0002440 A surface feature shape quality inhering in a bearer by virtue of the degree of the bearer's highly topographical with ridges, pits, rugosity or other surface structures. PATOC:GVG A surface feature shape in which the bearer's surface is highly topographical with ridges, pits, rugosity or other surface structures. 2013-01-29T10:59:42Z quality PATO:0002441 ornamented PATO:0002441 A surface feature shape in which the bearer's surface is highly topographical with ridges, pits, rugosity or other surface structures. PATOC:AD A surface feature shape in which the bearer's surface is lacking ridges, pits, rugosity or other surface structures. 2013-01-29T11:00:20Z quality PATO:0002442 unornamented PATO:0002442 A surface feature shape in which the bearer's surface is lacking ridges, pits, rugosity or other surface structures. PATOC:AD A positional quality inhering in a bearer by virtue of the bearer's being located at the same level as another entity. 2013-01-29T11:01:46Z quality PATO:0002443 level with PATO:0002443 A positional quality inhering in a bearer by virtue of the bearer's being located at the same level as another entity. PATOC:NI A composition quality inhering in a bearer by virtue of the bearer's being composed of or possessing inorganic material. 2013-01-29T11:03:49Z quality PATO:0002444 mineralized PATO:0002444 A composition quality inhering in a bearer by virtue of the bearer's being composed of or possessing inorganic material. PATOC:WC A shape quality inhering in a bearer by virtue of the bearer's being twisted or turned. 2013-01-29T11:05:26Z twisted quality PATO:0002445 The word "torsion" has multiple different meanings in different context (e.g. the act of twisting or the morphology of the digestive tract in gastropods). This term refers purely to the resulting shape and is not to be used in the engineering and mechanics sense of torsion. Note: kinked PATO:0001798(synonym twisted) is similar to 'torsioned', but it is different in that something that is kinked has sharp twists or turns. torsioned PATO:0002445 A shape quality inhering in a bearer by virtue of the bearer's being twisted or turned. freedictionary:freedictionary A shape quality inhering in a bearer by virtue of the bearer's having a shape resembling an anchor. 2013-01-29T11:07:17Z quality PATO:0002446 anchor-shaped PATO:0002446 A shape quality inhering in a bearer by virtue of the bearer's having a shape resembling an anchor. PATOC:WC A shape quality inhering in a bearer by virtue of the bearer being divided into four parts. 2013-01-29T11:08:28Z quality PATO:0002447 quadripartite PATO:0002447 A shape quality inhering in a bearer by virtue of the bearer being divided into four parts. PATOC:WC A quality inhering in a bearer by virtue of the bearer's being aligned or positioned towards another entity. 2013-02-16T02:57:06Z quality PATO:0002448 oriented towards PATO:0002448 A quality inhering in a bearer by virtue of the bearer's being aligned or positioned towards another entity. PATOC:WD A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and mid-line surface of an organism relative to another entity. 2013-02-16T03:00:46Z quality PATO:0002449 posteromedial to PATO:0002449 A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and mid-line surface of an organism relative to another entity. PATOC:WC A hardness quality of giving significant resistance to pressure. 2013-02-26T02:02:38Z quality PATO:0002450 firm PATO:0002450 A hardness quality of giving significant resistance to pressure. PATOC:CM A quality inhering in a bearer by virtue of the bearer's exhibiting a phenotypic difference between males and females of the same species. 2013-03-11T09:22:04Z quality PATO:0002451 sexually dimorphic PATO:0002451 A quality inhering in a bearer by virtue of the bearer's exhibiting a phenotypic difference between males and females of the same species. PATOC:WC A structural quality inhering in a bearer by virtue of the bearer being thinner or more loosely packed. 2013-04-08T08:43:31Z quality PATO:0002452 decondensed PATO:0002452 A structural quality inhering in a bearer by virtue of the bearer being thinner or more loosely packed. PATOC:JL A structural quality inhering in a bearer by virtue of the bearer bring gradually worn away. 2013-04-08T08:45:08Z quality PATO:0002453 eroding PATO:0002453 A structural quality inhering in a bearer by virtue of the bearer bring gradually worn away. PATOC:JL A quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a carpel. 2013-04-09T06:00:28Z quality PATO:0002454 carpel-like PATO:0002454 A quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a carpel. PATO:JL A quality inhering in a bearer by virtue of the bearer's architecture bearing resemblence to a corymb type of inflorescence. 2013-04-09T06:01:02Z quality PATO:0002455 corymb-like PATO:0002455 A quality inhering in a bearer by virtue of the bearer's architecture bearing resemblence to a corymb type of inflorescence. PATOC:JL A quality inhering in a bearer by virtue of the bearer's similarity to the appearance of an inflorescence. 2013-04-09T06:02:05Z quality PATO:0002456 inflorescence-like PATO:0002456 A quality inhering in a bearer by virtue of the bearer's similarity to the appearance of an inflorescence. PATOC:JL A structural quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a leaf. 2013-04-09T06:02:58Z quality PATO:0002457 leaf-like PATO:0002457 A structural quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a leaf. PATOC:JL A quality inhering in a bearer by virtue of the bearer being thin and lacking outgrowths. 2013-04-09T06:03:56Z quality PATO:0002458 pin-like PATO:0002458 A quality inhering in a bearer by virtue of the bearer being thin and lacking outgrowths. PATOC:JL A structural quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a sepal, 2013-04-09T06:04:36Z quality PATO:0002459 sepal-like PATO:0002459 A structural quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a sepal, PATOC:JL A structural quality inhering in a bearer by virtue of the bearer being smaller and contracted, especially due to loss of moisture. 2013-04-09T06:05:18Z quality PATO:0002460 shriveled PATO:0002460 A structural quality inhering in a bearer by virtue of the bearer being smaller and contracted, especially due to loss of moisture. PATOC:JL To bend or hang downwards due to loss of water 2013-04-09T06:06:14Z quality PATO:0002461 wilty PATO:0002461 A composition quality inhering in an bearer by virtue of the bearer's consisting of collagen. 2013-09-15T11:34:15Z quality PATO:0002462 collagenous PATO:0002462 A composition quality inhering in an bearer by virtue of the bearer's consisting of collagen. PATOC:WD A positional quality inhering in a bearer by virtue of some aspect of the bearer extending to the position of another entity. 2013-09-15T11:41:00Z quality PATO:0002463 extends to PATO:0002463 A positional quality inhering in a bearer by virtue of some aspect of the bearer extending to the position of another entity. PATOC:WD A positional quality inhering in a bearer by virtue of some aspect of the bearer extending past the position of another entity. 2013-09-15T11:42:15Z quality PATO:0002464 extends beyond PATO:0002464 A positional quality inhering in a bearer by virtue of some aspect of the bearer extending past the position of another entity. PATOC:WD A quality inhering in a bearer by virtue of the bearer's resembling a prism. 2013-09-15T11:44:03Z quality tent shaped PATO:0002465 prism shaped PATO:0002465 A shape quality inhering in a bearer by virtue of the bearer resembling a keyhole. 2013-09-15T11:45:53Z quality PATO:0002466 keyhole shaped PATO:0002466 A shape quality inhering in a bearer by virtue of the bearer resembling a keyhole. PATOC:WD A shape quality inhering in a bearer by virtue of the bearer resembling a thin narrow strip. 2013-09-15T11:47:11Z quality PATO:0002467 lathlike PATO:0002467 A shape quality inhering in a bearer by virtue of the bearer resembling a thin narrow strip. PATOC:WD A structure quality inhering in a bearer by virtue of the bearer's being capable of swelling or stretching. 2013-09-15T11:48:26Z quality PATO:0002468 distensible PATO:0002468 A structure quality inhering in a bearer by virtue of the bearer's being capable of swelling or stretching. PATOC:WD Structural quality inhering in a bearer in which a joint has apposed bony surfaces united by fibrous tissue, permitting no movement; found only between bones. 2013-09-15T11:55:50Z quality PATO:0002469 sutured to PATO:0002469 Structural quality inhering in a bearer in which a joint has apposed bony surfaces united by fibrous tissue, permitting no movement; found only between bones. PATOC:WD A morphological quality between two bearers inhering that one bearer is subject to change the nature, function, or condition of itself to become the other. 2013-09-15T12:01:57Z quality PATO:0002470 transformed to PATO:0002470 A morphological quality between two bearers inhering that one bearer is subject to change the nature, function, or condition of itself to become the other. PATOC:LC A physical quality inhering in a bearer by virtue of the bearer's increased rate of change of the position. 2013-09-15T12:03:45Z quality PATO:0002471 increased velocity PATO:0002471 A physical quality inhering in a bearer by virtue of the bearer's increased rate of change of the position. PATOC:NV A physical quality inhering in a bearer by virtue of the bearer's decreased rate of change of the position. 2013-09-15T12:05:06Z quality PATO:0002472 decreased velocity PATO:0002472 A physical quality inhering in a bearer by virtue of the bearer's decreased rate of change of the position. PATOC:NV A disposition inhering in a tumour by virtue of the bearer's disposition to spontaneously arise. 2013-09-15T12:07:08Z quality PATO:0002473 neoplastic, spontaneous PATO:0002473 A disposition inhering in a tumour by virtue of the bearer's disposition to spontaneously arise. PATOC:NV A flavor quality inhering in a bearer by virtue of the bearer's having an acrid, sharp, or disagreeable flavor. 2013-09-15T12:09:15Z quality PATO:0002474 bitter PATO:0002474 A flavor quality inhering in a bearer by virtue of the bearer's having an acrid, sharp, or disagreeable flavor. PATOC:LC A position quality inhering in a bearer by virtue of the bearer's existing near the end of another entity. 2013-09-15T12:17:41Z quality PATO:0002475 subterminal PATO:0002475 A position quality inhering in a bearer by virtue of the bearer's existing near the end of another entity. PATOC:WD A position quality inhering in a bearer by virtue of the bearer's forming the end of another entity. 2013-09-15T12:18:08Z quality PATO:0002476 terminal PATO:0002476 A position quality inhering in a bearer by virtue of the bearer's forming the end of another entity. PATOC:WD A structural quality inhering in a bearer by virtue of the bearer's disposition to breaks without significant deformation (strain) when subjected to stress. 2013-09-15T12:25:03Z quality PATO:0002477 brittle PATO:0002477 A structural quality inhering in a bearer by virtue of the bearer's disposition to breaks without significant deformation (strain) when subjected to stress. wikipedia:http://en.wikipedia.org/wiki/Brittleness A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel, that are oriented transversely relative to the long axis of the bearer. 2013-09-15T12:29:15Z quality PATO:0002478 transversely striated PATO:0002478 A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel, that are oriented transversely relative to the long axis of the bearer. PATOC:DS A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel, that are oriented obliquely relative to the long axis of the bearer. 2013-09-15T12:29:42Z quality PATO:0002479 obliquely striated PATO:0002479 A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel, that are oriented obliquely relative to the long axis of the bearer. PATOC:DS A quality inhering in an bearer by virtue of the bearer's possessing only minor levels of ossification. 2013-09-30T05:47:07Z quality PATO:0002480 poorly ossified PATO:0002480 A quality inhering in an bearer by virtue of the bearer's possessing only minor levels of ossification. PATOC:AD An orientation quality inhering in a bearer by virtue of the bearer having a slanting direction or position : neither perpendicular nor parallel. 2013-09-30T05:49:50Z quality PATO:0002481 oblique orientation PATO:0002481 An orientation quality inhering in a bearer by virtue of the bearer having a slanting direction or position : neither perpendicular nor parallel. merriam-wester:http://www.merriam-webster.com/dictionary/oblique Shape quality inhering in a bearer by virtue of the bearer exhibiting a narrow and elongate opening. 2013-09-30T05:51:39Z quality PATO:0002482 slit-like PATO:0002482 Shape quality inhering in a bearer by virtue of the bearer exhibiting a narrow and elongate opening. PATOC:WD Positional quality in which an entity is located outside of another entity. 2013-09-30T06:06:27Z quality PATO:0002483 external to PATO:0002483 Positional quality in which an entity is located outside of another entity. PATOC:WD An angular shape quality inhering in a bearer by virtue of the bearer's having a single angle in its length giving the bearer the form of an inverted letter V. 2013-10-10T03:55:44Z chevron shaped quality PATO:0002484 inverted-V shaped PATO:0002484 An angular shape quality inhering in a bearer by virtue of the bearer's having a single angle in its length giving the bearer the form of an inverted letter V. PATOC:WD A shape quality inhering in a bearer by virtue of the bearer's possessing two sides that are at the same continuous distance relative to each other. 2013-10-10T03:58:37Z quality PATO:0002485 parallel-sided PATO:0002485 A shape quality inhering in a bearer by virtue of the bearer's possessing two sides that are at the same continuous distance relative to each other. PATOC:WD A quality inhering in a process by virtue of that process having two or more organisms as participants. 2013-10-10T04:08:44Z quality PATO:0002486 multi-organismal process quality PATO:0002486 A quality inhering in a process by virtue of that process having two or more organisms as participants. PATOC:DS A quality inhering in a process by virtue of that process having exactly one organism as a participant. 2013-10-10T04:09:51Z quality PATO:0002487 single organismal process quality PATO:0002487 A quality inhering in a process by virtue of that process having exactly one organism as a participant. PATOC:DS Overlap with quality inhering in a bearer by virtue of the bearer's being positioned over another entity so as to cover some portion of it. 2013-10-10T04:12:22Z quality PATO:0002488 overlapping PATO:0002488 Overlap with quality inhering in a bearer by virtue of the bearer's being positioned over another entity so as to cover some portion of it. PATOC:WD Overlap with quality inhering in a bearer by virtue of the bearer's being positioned under another entity so as to be covered by some portion of it. 2013-10-10T04:13:04Z quality PATO:0002489 overlapped by PATO:0002489 Overlap with quality inhering in a bearer by virtue of the bearer's being positioned under another entity so as to be covered by some portion of it. PATOC:WD An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anteriorly. 2013-10-10T05:11:26Z anteriorly directly quality PATO:0002490 anterior orientation PATO:0002490 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anteriorly. PATOC:WD An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anterodorsally. 2013-10-10T05:12:15Z anterodorsally directed quality PATO:0002491 anterodorsal orientation PATO:0002491 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anterodorsally. PATOC:WD An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anterolaterally. 2013-10-10T05:13:17Z anterolaterally directed quality PATO:0002492 anterolateral orientation PATO:0002492 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anterolaterally. PATOC:WD An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anteroventrally. 2013-10-10T05:13:55Z anteroventrally directed quality PATO:0002493 anteroventral orientation PATO:0002493 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anteroventrally. PATOC:WD An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed distally. 2013-10-10T05:14:37Z distally directed quality PATO:0002494 distal orientation PATO:0002494 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed distally. PATOC:WD An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed dorsally. 2013-10-10T05:15:24Z dorsally directed quality PATO:0002495 dorsal orientation PATO:0002495 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed dorsally. PATOC:WD An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed dorsolaterally. 2013-10-10T05:16:04Z dorsolaterally directed quality PATO:0002496 dorsolateral orientation PATO:0002496 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed dorsolaterally. PATOC:WD An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed laterally. 2013-10-10T05:16:45Z laterally directed quality PATO:0002497 lateral orientation PATO:0002497 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed laterally. PATOC:WD An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed medially. 2013-10-10T05:17:30Z medially directed quality PATO:0002498 medial orientation PATO:0002498 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed medially. PATOC:WD An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posteriorly. 2013-10-10T05:18:21Z posteriorly directed quality PATO:0002499 posterior orientation PATO:0002499 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posteriorly. PATOC:WD An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed ventrolaterally. 2013-10-10T05:19:16Z ventrolaterally directed quality PATO:0002500 ventrolaterally orientation PATO:0002500 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed ventrolaterally. PATOC:WD An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed ventrally. 2013-10-10T05:19:22Z ventrally directed quality PATO:0002501 ventral orientation PATO:0002501 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed ventrally. PATOC:WD An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed transversely. 2013-10-10T05:19:25Z transversely oriented quality PATO:0002502 transverse orientation PATO:0002502 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed transversely. PATOC:WD An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posterolaterally. 2013-10-10T05:19:28Z posterolaterally directed quality PATO:0002503 posterolateral orientation PATO:0002503 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posterolaterally. PATOC:WD An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posterodorsally. 2013-10-10T05:19:36Z posterodorsally directed quality PATO:0002504 posterodorsal orientation PATO:0002504 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posterodorsally. PATOC:WD A nucleate quality inhering in a bearer by virtue of the bearer's having one or more nucleus. 2013-10-21T05:44:34Z quality PATO:0002505 nucleated PATO:0002505 A nucleate quality inhering in a bearer by virtue of the bearer's having one or more nucleus. PATOC:GVG A surface feature shape quality inhering in a bearer by virtue of the bearer's not having undulating edges forming lobes. 2013-10-25T04:42:40Z quality PATO:0002506 alobate PATO:0002506 A surface feature shape quality inhering in a bearer by virtue of the bearer's not having undulating edges forming lobes. PATOC:DOS A composition quality inhering in a bearer by virtue of the bearer's consisting of keratin. 2014-02-04T12:38:14Z quality PATO:0002507 keratinous PATO:0002507 A composition quality inhering in a bearer by virtue of the bearer's consisting of keratin. PATOC:EJS A positional quality inhering in a bearer by virtue of the bearer being hidden from view. 2014-02-04T01:30:21Z quality PATO:0002508 concealed PATO:0002508 A positional quality inhering in a bearer by virtue of the bearer being hidden from view. PATOC:EJS A 2-D shape quality inhering in a bearer by virtue of the bearer's having six angles and six sides. 2014-02-04T01:50:05Z quality PATO:0002509 hexagonal PATO:0002509 A 2-D shape quality inhering in a bearer by virtue of the bearer's having six angles and six sides. Merriam-Webster:hexagonal A concave 3-D shape quality inhering in a bearer by virtue of the bearer being divided into multiple parts. 2014-02-06T01:15:28Z quality PATO:0002510 multipartite PATO:0002510 A concave 3-D shape quality inhering in a bearer by virtue of the bearer being divided into multiple parts. PATOC:EJS A shape quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a cane. 2014-02-06T02:04:35Z quality cane-shaped PATO:0002511 cane-like PATO:0002511 A shape quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a cane. PATOC:EJS A positional quality inhering in a bearer by virtue of the bearer flowing or coming together with another entity. 2014-02-06T02:28:39Z quality PATO:0002512 confluent with PATO:0002512 A positional quality inhering in a bearer by virtue of the bearer flowing or coming together with another entity. Merriam-Webster:confluent A positional quality inhering in a bearer by virtue of the bearer's having a slanting direction (neither perpendicular nor parallel) relative to another entity. 2014-02-06T02:54:16Z quality PATO:0002513 oblique to PATO:0002513 A positional quality inhering in a bearer by virtue of the bearer's having a slanting direction (neither perpendicular nor parallel) relative to another entity. PATOC:EJS An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anteromedially. 2014-02-07T12:59:10Z medioanterior orientation quality PATO:0002514 anteromedial orientation PATO:0002514 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anteromedially. PATOC:EJS An elevation quality inhering in a bearer by virtue the bearer's being in a high position relative to another entity. 2014-02-07T01:12:48Z quality PATO:0002515 increased elevation relative to PATO:0002515 An elevation quality inhering in a bearer by virtue the bearer's being in a high position relative to another entity. PATOC:EJS A positional quality inhering in a bearer by virtue of the bearer being hidden from view or covered by another entity. 2014-02-10T01:13:53Z quality PATO:0002516 concealed by PATO:0002516 A positional quality inhering in a bearer by virtue of the bearer being hidden from view or covered by another entity. PATOC:EJS A shape quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a saddle. 2014-02-10T01:23:13Z quality PATO:0002517 saddle-shaped PATO:0002517 A shape quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a saddle. PATOC:EJS A positional quality inhering in a bearer by virtue of the bearer being level or even with another surface. 2014-02-10T01:26:50Z quality PATO:0002518 flush PATO:0002518 A positional quality inhering in a bearer by virtue of the bearer being level or even with another surface. WordReference:flush A structural quality inhering in a bearer by virtue of the bearer's having an open, latticed, or porous structure; used especially of bone. 2014-02-10T01:33:14Z quality PATO:0002519 cancellous PATO:0002519 A structural quality inhering in a bearer by virtue of the bearer's having an open, latticed, or porous structure; used especially of bone. TheFreeDictionary:cancellous A shape quality inhering in a bearer by virtue of the bearer being shaped like a scute or an osteoderm. 2014-02-10T01:37:47Z quality PATO:0002520 scute-like PATO:0002520 A shape quality inhering in a bearer by virtue of the bearer being shaped like a scute or an osteoderm. PATOC:EJS A shape quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a funnel. 2014-02-10T01:40:05Z quality PATO:0002521 funnel-shaped PATO:0002521 A shape quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a funnel. PATOC:EJS A shape quality inhering in a bearer by virtue of the bearer having an elongate structure, similar to a ridge, that extends longitudinally along an anatomical entity. 2014-02-10T01:46:38Z quality PATO:0002522 keel-shaped PATO:0002522 A shape quality inhering in a bearer by virtue of the bearer having an elongate structure, similar to a ridge, that extends longitudinally along an anatomical entity. PATOC:EJS A positional quality inhering in a bearer by virtue of the bearer's being located at a right angle relative to another entity and to the horizon. 2014-02-10T02:25:42Z quality PATO:0002523 vertical to PATO:0002523 A positional quality inhering in a bearer by virtue of the bearer's being located at a right angle relative to another entity and to the horizon. PATOC:EJS An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed mesiolaterally. 2014-02-10T02:37:42Z quality PATO:0002524 mesiolateral orientation PATO:0002524 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed mesiolaterally. PATOC:EJS A structural quality inhering in a bearer by virtue of the bearer being in a position that produces a separation in, or acting to separate, another entity. 2014-02-10T02:48:15Z quality PATO:0002525 separating PATO:0002525 A structural quality inhering in a bearer by virtue of the bearer being in a position that produces a separation in, or acting to separate, another entity. PATOC:EJS An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anterodistally. 2014-03-11T11:28:39Z antero-distal orientation quality PATO:0002526 anterodistal orientation PATO:0002526 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anterodistally. PATOC:EJS An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posterodistally. 2014-03-11T11:29:22Z postero-distal orientation quality PATO:0002527 posterodistal orientation PATO:0002527 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posterodistally. PATOC:EJS quality PATO:0002528 obsoleted because the ID was accidentally reused obsolete borderline intensity true PATO:0002528 quality PATO:0002529 obsoleted because the ID was accidentally reused obsolete profound intensity true PATO:0002529 quality PATO:0002530 obsoleted because the ID was accidentally reused obsolete episodic true PATO:0002530 quality PATO:0002531 obsoleted because the ID was accidentally reused obsolete refractory true PATO:0002531 quality PATO:0002532 obsoleted because the ID was accidentally reused obsolete secondary true PATO:0002532 A multipartite quality inhering in a bearer by virtue of the bearer being divided into two parts. 2014-08-12T11:12:13Z quality PATO:0002533 bipartite PATO:0002533 A multipartite quality inhering in a bearer by virtue of the bearer being divided into two parts. PATOC:WD A shape quality inhering in a bearer by virtue of the bearer's being shaped like a plowshare. 2014-08-12T11:23:12Z Image:http://2.bp.blogspot.com/_TbkIC-eqFNM/S66IJ3omNWI/AAAAAAAAFSk/pzThLJPvYZw/s1600/ard-detail.gif plow-share shaped quality PATO:0002534 plowshare shaped PATO:0002534 A shape quality inhering in a bearer by virtue of the bearer's being shaped like a plowshare. PATOC:WD A shape quality inhering in a bearer by virtue of the bearer's having a short and stout cylindrical shape. 2014-08-12T11:30:08Z quality PATO:0002535 peg-like PATO:0002535 A shape quality inhering in a bearer by virtue of the bearer's having a short and stout cylindrical shape. PATOC:WD A shape quality inhering in a bearer by virtue of the bearer's having a shape like a boomerang, with two arms connected at an angle. 2014-08-12T11:32:16Z quality PATO:0002536 boomerang shaped PATO:0002536 A shape quality inhering in a bearer by virtue of the bearer's having a shape like a boomerang, with two arms connected at an angle. PATOC:WD A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting a shape not quite ovoid. approximately ovoid. 2014-08-12T11:51:38Z quality PATO:0002537 subovoid PATO:0002537 A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting a shape not quite ovoid. approximately ovoid. merriam-webster:http://www.merriam-webster.com/dictionary/subovoid A shape quality that obtains by virtue of the bearer being concave on one side and convex on the other. 2014-08-12T11:56:13Z concavoconvex quality PATO:0002538 concavo-convex PATO:0002538 A shape quality that obtains by virtue of the bearer being concave on one side and convex on the other. merriam-webster:http://www.merriam-webster.com/dictionary/concavo-convex A shape quality inhering in a bearer by virtue of the bearer's having a shape like a ring (a circular shape enclosing a space). 2014-08-12T12:01:56Z annular ring-shaped quality PATO:0002539 ring shaped PATO:0002539 A shape quality inhering in a bearer by virtue of the bearer's having a shape like a ring (a circular shape enclosing a space). PATOC:WD A shape quality inhering in a bearer by virtue of the bearer's possessing a small, spike-like shape. 2014-08-12T12:07:44Z quality PATO:0002540 spur shaped PATO:0002540 A shape quality inhering in a bearer by virtue of the bearer's possessing a small, spike-like shape. PATOC:WD Pertaining to the ability or tendency of an organism or cell to maintain internal equilibrium by adjusting its physiological processes. 2014-12-01T16:07:28Z quality PATO:0002541 homeostatic PATO:0002541 Pertaining to the ability or tendency of an organism or cell to maintain internal equilibrium by adjusting its physiological processes. GO:0042592 An intensity which is borderline in it its effect or force as compared to baseline or normal. 2014-05-26T06:42:21Z quality PATO:0002628 borderline intensity PATO:0002628 An intensity which is characterized by being very severe. 2014-05-26T06:44:11Z quality PATO:0002629 profound intensity PATO:0002629 An intensity which is characterized by being very severe. PATO:MAH An occurrence quality inhering in a bearer by virtue of the bearer's having a course that occurs occasionally. 2014-05-26T06:50:16Z quality PATO:0002630 episodic PATO:0002630 An occurrence quality inhering in a bearer by virtue of the bearer's having a course that occurs occasionally. PATO:MAH An occurrence of a process during which time there is an inability to change the course, extent, or repetition of the process. 2014-05-26T13:09:29Z quality PATO:0002631 refractory PATO:0002631 An occurrence of a process during which time there is an inability to change the course, extent, or repetition of the process. PATO:MAH A quality in which the effect or outcome is not primary or the focus of the observation. 2014-05-26T13:17:45Z quality PATO:0002632 secondary PATO:0002632 A quality in which the effect or outcome is not primary or the focus of the observation. PATO:MAH A 3-D shape that is half of a sphere. 2014-09-09T12:25:08Z quality PATO:0005000 hemispheroid PATO:0005000 A 3-D shape that is half of a sphere. PATOC:WD A variability quality inhering in the bearer by virtue of the bearer having a variable number or count of an entity. 2014-09-09T12:27:33Z quality variable number PATO:0005001 variability of count PATO:0005001 A variability quality inhering in the bearer by virtue of the bearer having a variable number or count of an entity. PATOC:WD Having the shape of a pear; tapering near the top and bulging toward the base or bottom. From thefreedictionary.com 2014-09-09T12:30:02Z quality PATO:0005002 pear shaped PATO:0005002 Having the shape of a pear; tapering near the top and bulging toward the base or bottom. From thefreedictionary.com PATOC:WD A quality inhering in a bearer by virtue of the bearer's resembling the form of a paddle. 2014-09-09T12:34:45Z quality PATO:0005003 paddle shaped PATO:0005003 A quality inhering in a bearer by virtue of the bearer's resembling the form of a paddle. PATOC:WD A shape that is almost an ellipse. 2014-09-09T12:36:15Z quality PATO:0005004 subelliptical PATO:0005004 A shape that is almost an ellipse. PATOC:WD Shape quality inhering in a bearer expanding outward, or having parts expanding outward, from a center point. 2014-09-09T12:37:27Z quality PATO:0005005 radiating PATO:0005005 Shape quality inhering in a bearer expanding outward, or having parts expanding outward, from a center point. PATOC:WD A morphology quality inhering in a bearer by virtue of the bearer's being morphologically distinguishable from another entity. 2014-09-09T12:40:57Z distinct from quality PATO:0005006 differentiated from PATO:0005006 A morphology quality inhering in a bearer by virtue of the bearer's being morphologically distinguishable from another entity. PATOC:WD A 3-D shape inhering in a bearer by virtue of the bearer's having dentition characterized by high-crowned teeth and enamel which extends far past the gum line, which provides extra material for wear and tear. 2014-09-09T12:58:01Z quality PATO:0005007 Need to include axiom: hypsodont inheres_in some ('tooth crown' and bearer_of 'increased height'). hypsodont PATO:0005007 A 3-D shape inhering in a bearer by virtue of the bearer's having dentition characterized by high-crowned teeth and enamel which extends far past the gum line, which provides extra material for wear and tear. DOI:10.1111/j.1469-185X.2011.00176.x A 3-D shape inhering in a bearer by virtue of the bearer's having dentition characterized by low-crowned teeth. Human teeth are brachydont. 2014-09-09T12:59:35Z quality PATO:0005008 Need to include axiom: brachydont inheres_in some ('tooth crown' and bearer_of 'decreased height'). brachydont PATO:0005008 A 3-D shape inhering in a bearer by virtue of the bearer's having dentition characterized by low-crowned teeth. Human teeth are brachydont. DOI:10.1111/j.1469-185X.2011.00176.x A 3-D shape inhering in a bearer by virtue of the bearer's having an entity in the form of a molar tooth. 2014-09-09T13:03:00Z quality PATO:0005009 molariform PATO:0005009 A 3-D shape inhering in a bearer by virtue of the bearer's having an entity in the form of a molar tooth. PATOC:WD A branched quality inhering in a bearer by virtue of the bearer's having many fine filaments or branches that give a feathery appearance: for example, resembling a feather. 2014-09-25T15:03:17Z quality PATO:0005010 plumose PATO:0005010 A branched quality inhering in a bearer by virtue of the bearer's having many fine filaments or branches that give a feathery appearance: for example, resembling a feather. www.oxforddictionaries.com:http://www.oxforddictionaries.com/us/definition/american_english/plumose A positional quality inhering in a bearer by virtue of the bearer possessing an uninterrupted or unbroken connection or spatial distribution relative to the position of another entity. 2014-09-25T15:07:34Z quality PATO:0005011 continuous with PATO:0005011 A positional quality inhering in a bearer by virtue of the bearer possessing an uninterrupted or unbroken connection or spatial distribution relative to the position of another entity. PATOC:WD A structural quality inhering in a bearer by virtue of the bearer being fully formed compared to entities lacking parts. 2014-09-25T15:11:47Z quality PATO:0005012 complete structure PATO:0005012 A structural quality inhering in a bearer by virtue of the bearer being fully formed compared to entities lacking parts. PATOC:WD A structural quality inhering in a bearer by virtue of the bearer's lacking parts or having a reduced form compared to fully formed entities. 2014-09-25T15:12:35Z quality PATO:0005013 incomplete structure PATO:0005013 A structural quality inhering in a bearer by virtue of the bearer's lacking parts or having a reduced form compared to fully formed entities. PATOC:WD A spheroid shape quality inhering in a bearer by virtue of the bearer's being nearly, but not perfectly, spherical. 2014-09-25T15:16:25Z quality PATO:0005014 subspherical PATO:0005014 A spheroid shape quality inhering in a bearer by virtue of the bearer's being nearly, but not perfectly, spherical. PATOC:WD A size quality inhering in an entity or set of entities in which size increases or decreases along the extent of the entity or set. 2014-09-25T15:17:51Z gradient of size quality PATO:0005015 tapered size PATO:0005015 A size quality inhering in an entity or set of entities in which size increases or decreases along the extent of the entity or set. PATOC:WD A positional quality inhering in a bearer by virtue of the bearer's being enclosed on all sides by another entity. 2014-09-25T15:20:55Z enclosed by quality PATO:0005016 surrounded by PATO:0005016 A positional quality inhering in a bearer by virtue of the bearer's being enclosed on all sides by another entity. PATOC:WD A quality inhering in a bearer by virtue of the bearer's being compressed from the side facing the lips to the side facing the tongue. 2014-10-02T11:52:09Z quality PATO:0005017 labiolingually compressed PATO:0005017 A quality inhering in a bearer by virtue of the bearer's being compressed from the side facing the lips to the side facing the tongue. PATOC:WD A quality inhering in a bearer by virtue of the bearer's being compressed from the side facing the midline of the jaw to the side opposite the midline. 2014-10-02T11:53:52Z quality PATO:0005018 mesiodistally compressed PATO:0005018 A quality inhering in a bearer by virtue of the bearer's being compressed from the side facing the midline of the jaw to the side opposite the midline. PATOC:WD A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the tongue. 2014-10-02T12:01:16Z quality PATO:0005019 curved lingually PATO:0005019 A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the tongue. PATOC:WD A shape quality inhering on a bearer by virtue of a bearer's shape lacking in pattern or uniformity; for example, it may have sides of different lengths, different curvatures, or unequal angles. 2014-10-03T10:23:17Z quality PATO:0005020 irregularly shaped PATO:0005020 A shape quality inhering on a bearer by virtue of a bearer's shape lacking in pattern or uniformity; for example, it may have sides of different lengths, different curvatures, or unequal angles. PATOC:WD Cuspidate quality inhering in a bearer by virtue of the bearer's possessing a single cusp. 2014-10-17T14:14:04Z quality PATO:0005021 unicuspidate PATO:0005021 Cuspidate quality inhering in a bearer by virtue of the bearer's possessing a single cusp. PATOC:WD A diameter that remains constant throughout the extent of an entity. 2014-10-17T14:15:59Z quality PATO:0005022 uniform diameter PATO:0005022 A diameter that remains constant throughout the extent of an entity. PATOC:WD An orientation quality inhering in a bearer by virtue of the bearer having a position that is in the parasagittal plane. 2014-10-17T14:21:30Z quality PATO:0005023 parasagittal orientation PATO:0005023 An orientation quality inhering in a bearer by virtue of the bearer having a position that is in the parasagittal plane. PATOC:WD An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed along the longitudinal or anterior-posterior axis. 2014-10-17T14:24:19Z quality PATO:0005024 longitudinal orientation PATO:0005024 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed along the longitudinal or anterior-posterior axis. PATOC:WD A structural quality inhering in the bearer by virtue of the bearer consisting of a single, maximally connected structure. 2014-12-12T08:41:11Z quality PATO:0010000 What counts as maximally connected may be relative to some specification of granularity. maximally connected PATO:0010000 A structural quality inhering in the bearer by virtue of the bearer consisting of a single, maximally connected structure. GOC:dos A structural quality inhering in the bearer by virtue of the bearer consisting of multiple structures lacking any physical connection to each other. 2014-12-12T08:43:17Z quality PATO:0010001 disconnected PATO:0010001 A structural quality inhering in the bearer by virtue of the bearer consisting of multiple structures lacking any physical connection to each other. GOC:dos The velocity of spatial propagation of a process. Examples include the velocity of propagation of an action potential along an axon. 2019-07-18T18:24:15Z quality PATO:0010002 propagation velocity PATO:0010002 The velocity of spatial propagation of a process. Examples include the velocity of propagation of an action potential along an axon. https://orcid.org/0000-0002-7073-9172 A propagation velocity that is higher than normal. 2019-07-18T18:24:25Z quality PATO:0010003 increased propagation velocity PATO:0010003 A propagation velocity that is higher than normal. https://orcid.org/0000-0002-7073-9172 A propagation velocity that is lower than normal. 2019-07-18T18:24:36Z quality PATO:0010004 decreased propagation velocity PATO:0010004 A propagation velocity that is lower than normal. https://orcid.org/0000-0002-7073-9172 A physical quality of a process that is its spatial distribution. For example, bone mineralization follows stereotypical spatial distribution patterns during development, which may be altered in some phenotypes. 2019-07-18T18:49:08Z quality PATO:0010005 spatial distribution of a process PATO:0010005 A physical quality of a process that is its spatial distribution. For example, bone mineralization follows stereotypical spatial distribution patterns during development, which may be altered in some phenotypes. https://orcid.org/0000-0002-7073-9172 A quality of a single cell inhering in the bearer by virtue of the bearer's size or shape or structure. 2021-01-23T11:31:53Z quality PATO:0010006 Use this term for morphologies that can *only* inhere in a cell, e.g. morphological qualities inhering in a cell by virtue of the presence, location or shape of one or more cell parts. cell morphology PATO:0010006 A quality of a single cell inhering in the bearer by virtue of the bearer's size or shape or structure. https://orcid.org/0000-0002-7073-9172 A cellular quality inhering in a bearer by virtue of the bearer's having multiple cilia. 2024-07-23T10:43:20Z quality PATO:0010007 multiciliated PATO:0010007 A cellular quality inhering in a bearer by virtue of the bearer's having multiple cilia. PMID:36924208 A cellular quality inhering in a bearer by virtue of the bearer's having only one cilium. 2024-07-23T10:43:33Z quality PATO:0010008 monociliated PATO:0010008 A cellular quality inhering in a bearer by virtue of the bearer's having only one cilium. PMID:36924208 Absence due to a degenerative process. quality PATO:0015001 absence due to degeneration PATO:0015001 Absence due to a degenerative process. PATOC:PortlandMeetingFeb2015 The ability of a process to produce its output. quality PATO:0015002 process efficacy PATO:0015002 The ability of a process to produce its output. PATOC:PortlandMeetingFeb2015 A decrease in the ability of a process to produce its output. quality PATO:0015003 decreased efficacy PATO:0015003 A decrease in the ability of a process to produce its output. PATOC:PortlandMeetingFeb2015 A increase in the ability of a process to produce its output. quality PATO:0015004 increased efficacy PATO:0015004 A increase in the ability of a process to produce its output. PATOC:PortlandMeetingFeb2015 Slender and spirally coiled. tendrilled quality tendril-like tendril-shaped PATO:0015005 tendrilous PATO:0015005 Slender and spirally coiled. https://en.wiktionary.org/wiki/tendril A quality inhering in a structure by virtue of it consisting of many of repeated, similar or identical subunits, arranged in some orderly array. quality PATO:0015006 A complete coverage of this domain would subclasses homopolymeric, copolymeric, crystalline. polymeric PATO:0015006 A quality inhering in a structure by virtue of it consisting of many of repeated, similar or identical subunits, arranged in some orderly array. GOC:DOS https://github.com/pato-ontology/pato/issues/78 A quality inhering in a bearer by virtue of the degree to which the bearers stands out or projects beyond a surface or line. quality PATO:0015007 prominence PATO:0015007 A quality inhering in a bearer by virtue of the degree to which the bearers stands out or projects beyond a surface or line. GOC:CJM A quality inhering in a bearer by virtue of the extent to which the bearer is capable of being stretched or swollen. quality PATO:0015008 distensibility PATO:0015008 A quality inhering in a bearer by virtue of the extent to which the bearer is capable of being stretched or swollen. GOC:CJM A quality inhering in air by virtue of the partial pressure exerted by the bearer's water vapour content. quality PATO:0015009 humidity PATO:0015009 A quality inhering in air by virtue of the partial pressure exerted by the bearer's water vapour content. https://github.com/pato-ontology/pato/issues/90 An increase in humidity. quality humid PATO:0015010 increased humidity PATO:0015010 An increase in humidity. https://github.com/pato-ontology/pato/issues/90 An decrease in humidity. quality PATO:0015011 decreased humidity PATO:0015011 An decrease in humidity. https://github.com/pato-ontology/pato/issues/90 A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity consisting of roughly equal proportions of positively and negatively charged particles, having neither a defined volume nor defined shape, having internal magnetic fields, and being electrically conductive. quality PATO:0015012 quality of a plasma PATO:0015012 A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity consisting of roughly equal proportions of positively and negatively charged particles, having neither a defined volume nor defined shape, having internal magnetic fields, and being electrically conductive. https://github.com/pato-ontology/pato/issues/88 The degree to which the bearer is exposed to visible light. quality PATO:0015013 degree of illumination PATO:0015013 The degree to which the bearer is exposed to visible light. https://github.com/pato-ontology/pato/issues/89 An increase in illumination. quality illuminated PATO:0015014 increased degree of illumination PATO:0015014 An increase in illumination. https://github.com/pato-ontology/pato/issues/89 An decrease in illumination. quality PATO:0015015 decreased degree of illumination PATO:0015015 An decrease in illumination. https://github.com/pato-ontology/pato/issues/89 Having a shape or form that resembles a step of a stairway (e.g., a ledge or offset margin). quality PATO:0015016 stepped PATO:0015016 Having a shape or form that resembles a step of a stairway (e.g., a ledge or offset margin). http://www.thefreedictionary.com/stepped https://github.com/pato-ontology/pato/issues/82 A physical quality inhering in an entity by virtue of a portion of the bearer's molecular or polymolecular constituents present in one phase being dispersed in a portion of the bearer's constituents present in another phase. quality PATO:0015017 quality of a colloid PATO:0015017 A physical quality inhering in an entity by virtue of a portion of the bearer's molecular or polymolecular constituents present in one phase being dispersed in a portion of the bearer's constituents present in another phase. ENVO:pb https://github.com/pato-ontology/pato/issues/91 https://goldbook.iupac.org/html/C/C01172.html A physical quality inhering in an entity by virtue of the bearer's solid or liquid constituents being suspended in a gas. quality PATO:0015018 quality of an aerosol PATO:0015018 A physical quality inhering in an entity by virtue of the bearer's solid or liquid constituents being suspended in a gas. ENVO:pb https://github.com/pato-ontology/pato/issues/91 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter C. quality PATO:0015019 C-shaped PATO:0015019 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter C. github:mah11 https://github.com/pato-ontology/pato/issues/96 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter J. quality PATO:0015020 J-shaped PATO:0015020 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter J. github:mah11 https://github.com/pato-ontology/pato/issues/96 The propensity of a material to undergo combustion. Combustion encompasses smouldering and flaming combustion. Combustibility is usually applied to solids. quality PATO:0015021 combustibility PATO:0015021 The propensity of a material to undergo combustion. Combustion encompasses smouldering and flaming combustion. Combustibility is usually applied to solids. https://en.wikipedia.org/wiki/Combustibility https://github.com/EnvironmentOntology/envo/issues/384 An increase in combustibility. combustible quality PATO:0015022 increased combustibility PATO:0015022 An decrease in combustibility. quality noncombustible PATO:0015023 decreased combustibility PATO:0015023 An increase in porosity. quality PATO:0015024 increased porosity PATO:0015024 An increase in porosity. https://github.com/pato-ontology/pato/issues/110 An decrease in porosity. quality PATO:0015025 decreased porosity PATO:0015025 An decrease in porosity. https://github.com/pato-ontology/pato/issues/110 quality, state, or degree of being stable. quality PATO:0015026 stability PATO:0015026 quality, state, or degree of being stable. https://github.com/pato-ontology/pato/issues/113 An increase in stability. quality PATO:0015027 increased stability PATO:0015027 An increase in stability. https://github.com/pato-ontology/pato/issues/113 A decrease in stability. quality PATO:0015028 decreased stability PATO:0015028 A decrease in stability. https://github.com/pato-ontology/pato/issues/113 A physical quality inhering in an entity by virtue of the bearer's solid or liquid constituents being transiently dispersed in a solid, liquid, or gas before settling due to gravity or centrifugal forces. quality PATO:0015029 quality of a suspension PATO:0015029 A physical quality inhering in an entity by virtue of the bearer's solid or liquid constituents being transiently dispersed in a solid, liquid, or gas before settling due to gravity or centrifugal forces. ENVO:pb https://github.com/pato-ontology/pato/issues/91 A shape that ineres in a bearer by virtue of the bearer's mass being distributed in a feather-like fashion. feather-shaped plumed quality PATO:0015030 plume-shaped PATO:0015030 A shape that ineres in a bearer by virtue of the bearer's mass being distributed in a feather-like fashion. https://github.com/pato-ontology/pato/issues/122 The presence of a constituent, impurity, or some other undesirable element that spoils, corrupts, infects, makes unfit, or makes inferior a material, physical body, natural environment, place of human occupancy, or other material entity. degree of contamination quality PATO:0015031 contamination PATO:0015031 The presence of a constituent, impurity, or some other undesirable element that spoils, corrupts, infects, makes unfit, or makes inferior a material, physical body, natural environment, place of human occupancy, or other material entity. https://en.wikipedia.org/wiki/Contamination https://github.com/pato-ontology/pato/issues/420 An increase in contamination. contaminated quality PATO:0015032 increased contamination PATO:0015032 An increase in contamination. https://en.wikipedia.org/wiki/Contamination https://github.com/pato-ontology/pato/issues/420 A decrease in contamination. uncontaminated quality PATO:0015033 decreased contamination PATO:0015033 A decrease in contamination. https://en.wikipedia.org/wiki/Contamination https://github.com/pato-ontology/pato/issues/420 A biological sex quality inhering in an individual based upon genotypic composition of sex chromosomes. quality PATO:0020000 Note that the chromosomal constitution of genotypic sex varies in different organisms. In human, we have XY, XX, though abnormal XXY, X0, XYY, and other combinations are possible. genotypic sex PATO:0020000 A biological sex quality inhering in an individual based upon genotypic composition of sex chromosomes. PATOC:MAH A biological sex quality inhering in an individual based upon genotypic composition that confers the capability for an organism to differentiate male gonads. quality PATO:0020001 Note that the chromosomal constitution of genotypic sex varies in different organisms. In human, this would be XY, though abnormal XXY and XYY would also result in a male phenotypic outcome. male genotypic sex PATO:0020001 A biological sex quality inhering in an individual based upon genotypic composition that confers the capability for an organism to differentiate male gonads. PATOC:MAH A biological sex quality inhering in an individual or a population based upon genotypic composition that confers the capability for an organism to differentiate female gonads. quality PATO:0020002 Note that the chromosomal constitution of genotypic sex varies in different organisms. In human, this would be XX, though abnormal X0 and XXX would also result in a female phenotypic outcome. female genotypic sex PATO:0020002 A biological sex quality inhering in an individual or a population based upon genotypic composition that confers the capability for an organism to differentiate female gonads. PATOC:MAH A physical quality inhering in a bearer by virtue of the bearer's disposition to being fit to be used as a safe means of hydration. 2015-09-01T16:16:44Z drinkability quality PATO:0025000 potability PATO:0025000 A physical quality inhering in a bearer by virtue of the bearer's disposition to being fit to be used as a safe means of hydration. Wikipedia:https://en.wikipedia.org/wiki/Drinking_water A physical quality inhering in a bearer by virtue of the bearer not being suitable for use as a safe means of hydration. 2015-09-01T16:18:57Z undrinkable quality PATO:0025001 non-potable PATO:0025001 A physical quality inhering in a bearer by virtue of the bearer not being suitable for use as a safe means of hydration. Wikipedia:https://en.wikipedia.org/wiki/Drinking_water A physical quality inhering in a bearer by virtue of the bearer being suitable for use as a safe means of hydration. 2015-09-01T16:19:02Z drinkable quality PATO:0025002 potable PATO:0025002 A physical quality inhering in a bearer by virtue of the bearer being suitable for use as a safe means of hydration. Wikipedia:https://en.wikipedia.org/wiki/Drinking_water A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally anterior structures and missing some or all of what are normally posterior structures. anterioralized quality PATO:0030000 anteriorized PATO:0030000 A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally anterior structures and missing some or all of what are normally posterior structures. PATOC:EJS A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally dorsal structures and missing some or all of what are normally ventral structures. quality PATO:0030001 dorsalized PATO:0030001 A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally dorsal structures and missing some or all of what are normally ventral structures. PATOC:EJS A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally posterior structures and missing some or all of what are normally anterior structures. posterioralized quality PATO:0030002 posteriorized PATO:0030002 A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally posterior structures and missing some or all of what are normally anterior structures. PATOC:EJS A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally ventral structures and missing some or all of what are normally dorsal structures. quality PATO:0030003 ventralized PATO:0030003 A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally ventral structures and missing some or all of what are normally dorsal structures. PATOC:EJS An anteriorized quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally anterior structures and missing some but not all of what are normally posterior structures. partially anterioralized quality PATO:0030004 partially anteriorized PATO:0030004 An anteriorized quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally anterior structures and missing some but not all of what are normally posterior structures. PATOC:EJS A dorsalized quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally dorsal structures and missing some but not all of what are normally ventral structures. quality PATO:0030005 partially dorsalized PATO:0030005 A dorsalized quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally dorsal structures and missing some but not all of what are normally ventral structures. PATOC:EJS A posteriorized quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally posterior structures and missing some but not all of what are normally anterior structures. partially posterioralized quality PATO:0030006 partially posteriorized PATO:0030006 A posteriorized quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally posterior structures and missing some but not all of what are normally anterior structures. PATOC:EJS A ventralized quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally ventral structures and missing some but not all of what are normally dorsal structures. quality PATO:0030007 partially ventralized PATO:0030007 A ventralized quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally ventral structures and missing some but not all of what are normally dorsal structures. PATOC:EJS A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally dorso-anterior structures and missing some or all of what are normally ventro-posterior structures. quality PATO:0030008 dorso-anteriorized PATO:0030008 A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally dorso-anterior structures and missing some or all of what are normally ventro-posterior structures. PATOC:EJS A dorso-anteriorized quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally dorso-anterior structures and missing some but not all of what are normally ventro-posterior structures. quality PATO:0030009 partially dorso-anteriorized PATO:0030009 A dorso-anteriorized quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally dorso-anterior structures and missing some but not all of what are normally ventro-posterior structures. PATOC:EJS A dorso-anteriorized quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally dorso-anterior structures. quality PATO:0030010 wholly dorso-anteriorized PATO:0030010 A dorso-anteriorized quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally dorso-anterior structures. PATOC:EJS A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally ventro-posterior structures and missing some or all of what are normally dorso-anterior structures. quality PATO:0030011 ventro-posteriorized PATO:0030011 A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally ventro-posterior structures and missing some or all of what are normally dorso-anterior structures. PATOC:EJS A ventro-posteriorized quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally ventro-posterior structures and missing some but not all of what are normally dorso-anterior structures. quality PATO:0030012 partially ventro-posteriorized PATO:0030012 A ventro-posteriorized quality inhering in a bearer by virtue of the bearer's gross morphology containing what are normally ventro-posterior structures and missing some but not all of what are normally dorso-anterior structures. PATOC:EJS A ventro-posteriorized quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally ventro-posterior structures. quality PATO:0030013 wholly ventro-posteriorized PATO:0030013 A ventro-posteriorized quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally ventro-posterior structures. PATOC:EJS An oriented quality inhering in a bearer by virtue of the bearer's being abnormally placed or arranged. 2018-05-21T22:44:38Z quality PATO:0040000 heterotaxic PATO:0040000 An oriented quality inhering in a bearer by virtue of the bearer's being abnormally placed or arranged. http://medical-dictionary.thefreedictionary.com/heterotaxic quality PATO:0040001 obsolete ring-shaped true PATO:0040001 A positional quality inhering in a bearer by virtue of some aspect of that bearer beginning from a position on another entity. 2018-05-24T04:10:53Z quality PATO:0040002 Original label "originates from" changed to current label to differentiate that this term is a positional quality rather than one that connects between an entity and another entity it originates from. position originates from PATO:0040002 The ability of a pathogen to produce an infectious disease or disorder in an another organism. 2018-08-02T04:24:52Z quality PATO:0040003 pathogenicity PATO:0040003 The ability of a pathogen to produce an infectious disease or disorder in an another organism. https://orcid.org/0000-0001-8941-3984 A texture quality inhering in a bearer by virtue of the bearer's being covered or partially covered with hair that has increased thickness and softness. 2018-08-02T04:39:30Z quality PATO:0040004 plush PATO:0040004 A texture quality inhering in a bearer by virtue of the bearer's being covered or partially covered with hair that has increased thickness and softness. https://orcid.org/0000-0001-5208-3432 https://orcid.org/0000-0003-4606-0597 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posteroventrally. 2018-11-12T22:54:16Z posteroventrally oriented quality PATO:0040005 posteroventral orientation PATO:0040005 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posteroventrally. https://orcid.org/0000-0003-3162-7490 A shape quality inhering in a bearer by virtue of the bearer's having a shape like a crown. 2018-11-12T18:09:59Z quality PATO:0040006 crown like PATO:0040006 A shape quality inhering in a bearer by virtue of the bearer's having a shape like a crown. https://orcid.org/0000-0003-3162-7490 A shape quality inhering in a bearer by virtue of the bearer's having a shape like a shell. 2018-11-12T18:12:47Z quality PATO:0040007 shell shaped PATO:0040007 A shape quality inhering in a bearer by virtue of the bearer's having a shape like a shell. https://orcid.org/0000-0003-3162-7490 A shape quality inhering in a bearer by virtue of the bearer's having an ornamental border consisting of short straight or twisted threads or strips hanging from cut or raveled edges or from a separate band. 2018-11-12T18:15:10Z quality PATO:0040008 fringed PATO:0040008 A shape quality inhering in a bearer by virtue of the bearer's having an ornamental border consisting of short straight or twisted threads or strips hanging from cut or raveled edges or from a separate band. https://orcid.org/0000-0003-3162-7490 https://www.merriam-webster.com/dictionary/fringe A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of a bowl. 2018-11-12T18:17:01Z quality PATO:0040009 bowl shaped PATO:0040009 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of a bowl. https://orcid.org/0000-0003-3162-7490 Mobility relative to a second entity. 2018-11-12T18:20:08Z quality PATO:0040010 For example, distinct anteroposterior mobility of palatine relative to mesethmoid. mobile relative to PATO:0040010 Mobility relative to a second entity. https://orcid.org/0000-0003-3162-7490 Immobility relative to a second entity. 2018-11-12T18:21:07Z quality PATO:0040011 For example: distinct anteroposterior immobility of palatine relative to mesethmoid. immobile relative to PATO:0040011 Immobility relative to a second entity. https://orcid.org/0000-0003-3162-7490 A shape that is in the form of a plug, being tube-like and expanded on one end. 2018-11-12T18:24:41Z plug like quality PATO:0040012 plug shaped PATO:0040012 A shape that is in the form of a plug, being tube-like and expanded on one end. https://orcid.org/0000-0003-3162-7490 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed dorsomedially. 2018-11-12T18:27:57Z dorsomedially directed quality PATO:0040013 dorsomedial orientation PATO:0040013 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed dorsomedially. https://orcid.org/0000-0003-3162-7490 A shape that is in the form of a narrow strip encircling an object. 2018-11-12T18:31:51Z band like band-like strip like strip-like quality PATO:0040014 band shaped PATO:0040014 A shape that is in the form of a narrow strip encircling an object. https://orcid.org/0000-0003-3162-7490 https://www.merriam-webster.com/dictionary/band A concave 3-D shape quality inhering in a bearer by virtue of the bearer's shape resembling that of a trough, being narrow, long, and boxlike in shape. 2018-11-12T18:35:51Z trough like trough-like trough-shaped quality PATO:0040015 trough shaped PATO:0040015 A concave 3-D shape quality inhering in a bearer by virtue of the bearer's shape resembling that of a trough, being narrow, long, and boxlike in shape. http://www.dictionary.com/browse/trough https://orcid.org/0000-0003-3162-7490 A shape quality inhering in a bearer by virtue of the bearer's having five angles and five sides. 2018-11-12T18:39:48Z quality PATO:0040016 pentagonal PATO:0040016 A shape quality inhering in a bearer by virtue of the bearer's having five angles and five sides. https://orcid.org/0000-0003-3162-7490 https://www.merriam-webster.com/dictionary/pentagonal A growth quality of occurrent in which the growth of an organism, structure or group of organisms is abnormal. 2018-11-12T19:01:51Z dysgenesis quality PATO:0040017 dysplastic growth PATO:0040017 A growth quality of occurrent in which the growth of an organism, structure or group of organisms is abnormal. https://www.cancer.gov/publications/dictionaries/cancer-terms/def/dysplasia Fibrosis is the formation of excess fibrous connective tissue in an organ or tissue in a reparative or reactive process. 2018-11-12T23:16:17Z quality PATO:0040019 fibrotic PATO:0040019 Fibrosis is the formation of excess fibrous connective tissue in an organ or tissue in a reparative or reactive process. https://en.wikipedia.org/wiki/Fibrosis Female quality of being incapable to reproduce because of functional loss of the ovaries and/or uterus from surgical removal. 2018-11-16T22:52:49Z quality PATO:0040020 spayed female PATO:0040020 The bearer of this quality has_part n=1 of the indicated entity type, where n is bilaterally paired for a comparable organism.. quality PATO:0040021 unpaired PATO:0040021 The bearer of this quality has_part n=1 of the indicated entity type, where n is bilaterally paired for a comparable organism.. https://orcid.org/0000-0003-3162-7490 A shape quality inhering in a bearer by virtue of the bearer being expanded laterally and or opened outward in shape. 2018-11-19T21:49:07Z quality PATO:0040022 flared PATO:0040022 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed distomedially, ie, pertaining to an inside aspect, but also farther away from the center of the body. 2018-11-19T21:54:33Z disto-medial orientation distomedial quality PATO:0040023 distomedial orientation PATO:0040023 An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed distomedially, ie, pertaining to an inside aspect, but also farther away from the center of the body. https://en.wiktionary.org/wiki/distomedial The bearer of this quality has_part n=2 of the indicated entity type, where n is unpaired for a comparable organism. paired quality PATO:0040024 bilaterally paired PATO:0040024 The bearer of this quality has_part n=2 of the indicated entity type, where n is unpaired for a comparable organism. https://orcid.org/0000-0003-3162-7490 A structural quality which is held by a bearer where a localized pathological or traumatic structural change, damage, deformity, or discontinuity of tissue, organ, or body part is present. quality PATO:0040025 lesioned PATO:0040025 A structural quality which is held by a bearer where a localized pathological or traumatic structural change, damage, deformity, or discontinuity of tissue, organ, or body part is present. NCIT:C3824 A structural quality inhering in a bearer by virtue of the bearer's being marked by interruptions or gaps. structurally interrupted quality PATO:0040026 This term is intended for use for terms such as MP:0010461 discontinuous pulmonary artery and MP:0004157 interrupted aortic arch. structurally discontinuous PATO:0040026 A ploidy quality inhering in a bearer by virtue of the bearer's haploid cells undergo chromosome doubling. double haploid double-haploid quality PATO:0040027 doubled haploid PATO:0040027 A ploidy quality inhering in a bearer by virtue of the bearer's haploid cells undergo chromosome doubling. Wikipedia:https://en.wikipedia.org/wiki/Doubled_haploidy An organismal quality of having successfully reproduced. quality PATO:0040028 parous PATO:0040028 An organismal quality of having successfully reproduced. EFO:0002947 A physical quality inhering in a bearer by virtue of that bearer being shielded from visible light. quality PATO:0040029 Shaded does not refer to radiation more generally, as this would be more shielded than shaded. shaded PATO:0040029 A physical quality inhering in a bearer by virtue of that bearer being shielded from visible light. https://orcid.org/0000-0002-4366-3088 A width and length quality which is relatively small, where both width and length are decreased. quality PATO:0040030 decreased width and length PATO:0040030 A width and length quality that is relatively large, where both width and length are increased. quality PATO:0040031 increased width and length PATO:0040031 A distance traveled in a specific time that is relatively high. quality PATO:0040032 increased linear velocity PATO:0040032 A distance traveled in a specific time that is relatively high. https://orcid.org/0000-0002-2244-7917 A distance traveled in a specific time that is relatively low. quality PATO:0040033 decreased linear velocity PATO:0040033 A distance traveled in a specific time that is relatively low. https://orcid.org/0000-0002-2244-7917 A broken quality where an entity is cracked or broken, usually a bone. quality PATO:0040034 fractured PATO:0040034 A broken quality where an entity is cracked or broken, usually a bone. https://medlineplus.gov/fractures.html A fractured quality where the fracture traverses the bone perpendicular to the axis of the bone. fractured, transverse quality PATO:0040035 transversely fractured PATO:0040035 A fractured quality where the fracture traverses the bone perpendicular to the axis of the bone. https://radiopaedia.org/articles/transverse-fracture?lang=us A fractured quality in which one of the fragments is driven into another fragment. fractured, impacted impact fractured quality PATO:0040036 impact-fractured PATO:0040036 A fractured quality in which one of the fragments is driven into another fragment. https://www.dictionary.com/browse/impacted-fracture A fractured quality where the fracture runs parallel to the long axis of a bone. fractured, linear quality PATO:0040037 linearly fractured PATO:0040037 A fractured quality where the fracture runs parallel to the long axis of a bone. https://www.dictionary.com/browse/linear-fracture A fractured quality where the fracture occurs at a plane oblique to the long axis of the bone. fractured, oblique quality PATO:0040038 obliquely fractured PATO:0040038 A fractured quality where the fracture occurs at a plane oblique to the long axis of the bone. https://radiopaedia.org/articles/oblique-fracture?lang=us A fractured quality that occurs when torque (a rotating force) is applied along the axis of a bone. fractured, spiral fractured, torsion quality PATO:0040039 spirally fractured PATO:0040039 A fractured quality that occurs when torque (a rotating force) is applied along the axis of a bone. https://en.wikipedia.org/wiki/Spiral_fracture A fractured quality that is caused by a loss of bone mass (osteoporosis) that occurs as part of aging. compression fractured fractured, compression fractured, wedge wedge fractured quality PATO:0040040 compression-fractured PATO:0040040 A fractured quality that is caused by a loss of bone mass (osteoporosis) that occurs as part of aging. https://www.mayoclinic.org/diseases-conditions/osteoporosis/multimedia/compression-fractures/img-20008995 A fractured quality in which the fragment of bone tears away from the main mass of bone as a result of physical trauma. fractured, avulsion quality PATO:0040041 avulsion fractured PATO:0040041 A fractured quality in which the fragment of bone tears away from the main mass of bone as a result of physical trauma. https://en.wikipedia.org/wiki/Avulsion_fracture A decreased quality inhering in a bearer by virtue of the bearer's decreased magnitude in proportion to the magnitude of another entity. decreased proportion decreased proportionality decreased proportionality to decreased quotient quality PATO:0040042 Example: decreased proportion of CD4 T cells relative to total T cells. decreased ratio PATO:0040042 A decreased quality inhering in a bearer by virtue of the bearer's decreased magnitude in proportion to the magnitude of another entity. https://orcid.org/0000-0001-5208-3432 https://orcid.org/0000-0001-8314-2140 An increased quality inhering in a bearer by virtue of the bearer's increased magnitude in proportion to the magnitude of another entity. increased proportion increased proportionality increased proportionality to increased quotient quality PATO:0040043 Example: increased proportion of CD4 T cells relative to total T cells. increased ratio PATO:0040043 An increased quality inhering in a bearer by virtue of the bearer's increased magnitude in proportion to the magnitude of another entity. https://orcid.org/0000-0001-5208-3432 https://orcid.org/0000-0001-8314-2140 A structural quality inhering in a bearer by virtue of the bearer's components being torn, typically used for soft tissues or membranes. burst quality PATO:0040044 ruptured PATO:0040044 A structural quality inhering in a bearer by virtue of the bearer's components being torn, typically used for soft tissues or membranes. https://orcid.org/0000-0003-4606-0597 The rate or speed of the change in in number of a population. http://orcid.org/0000-0001-5208-3432 quality PATO:0040045 population growth rate PATO:0040045 The rate or speed of the change in in number of a population. https://orcid.org/0000-0002-9900-7880 https://orcid.org/0000-0003-4606-0597 The rate or speed of the change in size of an individual entity. http://orcid.org/0000-0001-5208-3432 quality PATO:0040046 single organismal growth rate PATO:0040046 The rate or speed of the change in size of an individual entity. https://orcid.org/0000-0002-9900-7880 https://orcid.org/0000-0003-4606-0597 Existing or functioning as though broken into separate parts; disorganized; disunified. quality PATO:0040047 Moved to a child of wholeness because broken implies a trauma and fragmented could be caused by a developmental process. See HP:0100168 Fragmented epiphyses as an example. fragmented PATO:0040047 Existing or functioning as though broken into separate parts; disorganized; disunified. https://www.dictionary.com/browse/unfragmented Red due to increase blood circulation in a defined area. erythema skin redness quality PATO:0040048 erythematous PATO:0040048 Red due to increase blood circulation in a defined area. https://orcid.org/0000-0002-0736-9199 A biological sex quality inhering in an individual or a population who are otherwise male of a non-hermaphroditic species who has ambiguous or atypical congenital development of the reproductive system. https://github.com/pato-ontology/pato/issues/482 http://orcid.org/0000-0001-5208-3432 intersex male with differences of sexual differentiation male with disorder of sexual development male, DSD quality PATO:0040049 The term intersex is popular in use, but may be considered offensive when applied to humans. DSD can be expanded multiple ways to 'disorders/differences of sexual development/differentiation'. male with DSD PATO:0040049 A phenotypic sex quality inhering in a plant organism or a population of plants in which the flowers have two stamens. quality PATO:0040050 diandrous PATO:0040050 A phenotypic sex quality inhering in a plant organism or a population of plants in which the flowers have two stamens. http://orcid.org/0000-0002-2908-3327 https://orcid.org/0000-0001-8815-0078 A phenotypic sex quality inhering in a plant organism or a population of plants in which the flowers have only one stamen. quality PATO:0040051 monandrous PATO:0040051 A phenotypic sex quality inhering in a plant organism or a population of plants in which the flowers have only one stamen. http://orcid.org/0000-0002-2908-3327 https://orcid.org/0000-0001-8815-0078 A sequential hermaphroditic quality whereby organisms start out as female and change to male at a later life stage. protogyny quality PATO:0040052 protogynous PATO:0040052 A sequential hermaphroditic quality whereby organisms start out as female and change to male at a later life stage. https://en.wikipedia.org/wiki/Sequential_hermaphroditism http://orcid.org/0000-0002-2908-3327 A sequential hermaphroditic quality whereby organisms start out as male and change to female at a later life stage. protandry quality PATO:0040053 protandrous PATO:0040053 A sequential hermaphroditic quality whereby organisms start out as male and change to female at a later life stage. http://orcid.org/0000-0002-2908-3327 https://en.wikipedia.org/wiki/Sequential_hermaphroditism A protogynous quality whereby organisms start out as female and change to hermaphrodite at a later life stage. protogynous hermaphrodite protogynous hermaphroditic quality PATO:0040054 protogynous hermaphroditism PATO:0040054 A protogynous quality whereby organisms start out as female and change to hermaphrodite at a later life stage. https://en.wikipedia.org/wiki/Sequential_hermaphroditism A protandrous quality whereby organisms start out as male and change to hermaphrodite at a later life stage. protandrous hermaphrodite protandrous hermaphroditic quality PATO:0040055 protandrous hermaphroditism PATO:0040055 A protandrous quality whereby organisms start out as male and change to hermaphrodite at a later life stage. https://en.wikipedia.org/wiki/Sequential_hermaphroditism A biological sex quality inhering in an individual or a population who are otherwise female of a non-hermaphroditic species who has ambiguous or atypical congenital development of the reproductive system. https://github.com/pato-ontology/pato/issues/482 http://orcid.org/0000-0001-5208-3432 intersex female with differences of sexual differentiation female with disorder of sexual development female, DSD quality PATO:0040056 The term intersex is popular in use, but may be considered offensive when applied to humans. DSD can be expanded multiple ways to 'disorders/differences of sexual development/differentiation'. female with DSD PATO:0040056 A quality inhering in a process by virtue of that process having a population or part of a population, where population is defined as a collection of individuals from the same taxonomic class distinguished by one or more characteristics, as participants. http://orcid.org/0000-0001-5208-3432 quality PATO:0040057 population process quality PATO:0040057 A quality inhering in a process by virtue of that process having a population or part of a population, where population is defined as a collection of individuals from the same taxonomic class distinguished by one or more characteristics, as participants. https://www.alliancegenome.org/glossary A quality denoting the lack of a physical entity or object, such as a chemical. http://orcid.org/0000-0001-5208-3432 physical absence quality PATO:0040058 absence of physical object PATO:0040058 A quality denoting the lack of a physical entity or object, such as a chemical. thefreedictionary.:thefreedictionary. A quality denoting the lack of a process or function. http://orcid.org/0000-0001-5208-3432 thefreedictionary.:thefreedictionary. Process absence quality PATO:0040059 absent process PATO:0040059 A quality denoting the lack of an anatomical entity or cellular component. http://orcid.org/0000-0001-5208-3432 anatomical entity absence quality PATO:0040060 Absence of anatomical entity should only be used when all of the entity is absent. For example, absent teeth would mean all teeth are absent not some teeth are absent. absence of anatomical entity PATO:0040060 A quality denoting the lack of an anatomical entity or cellular component. thefreedictionary.:thefreedictionary. A physical quality inhering in a bearer by virtue of the bearer's disposition to deform by heating. quality PATO:0040070 thermoplastic PATO:0040070 A physical quality inhering in a bearer by virtue of the bearer's disposition to deform by heating. http://www.gesamp.org/publications/guidelines-for-the-monitoring-and-assessment-of-plastic-litter-in-the-ocean https://orcid.org/0000-0002-8166-0486 A quality inhering in a cell by virtue of the ratio between the volume of its nucleus and the volume of its cytoplasm. http://orcid.org/0000-0001-5208-3432 N:C ratio quality PATO:0040071 nuclear/cytoplasmic ratio PATO:0040071 A quality inhering in a cell by virtue of the ratio between the volume of its nucleus and the volume of its cytoplasm. Wikipedia:NC_ratio&oldid=931936284 A quality inhering in a cell by virtue of the cell having a high nuclear/cytoplasmic ratio. http://orcid.org/0000-0001-5208-3432 high N:C ratio quality PATO:0040072 A high nuclear/cytolasmic ratio is 70% or higher. high nuclear/cytoplasmic ratio PATO:0040072 A quality inhering in a cell by virtue of the cell having a high nuclear/cytoplasmic ratio. Wikipedia:NC_ratio&oldid=931936284 http://lymerick.net/blood-cells.pdf A rate which is relatively normal. quality PATO:0045000 normal rate PATO:0045000 A quality of an object that has a value that is normal or average. 2017-12-21T14:11:01Z quality PATO:0045001 normal object quality PATO:0045001 An acidity which is relatively normal. quality PATO:0045002 normal acidity PATO:0045002 A adhesivity which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045003 normal adhesivity PATO:0045003 An affinity which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045004 normal affinity PATO:0045004 An age which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045005 normal age PATO:0045005 An avidity which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045006 normal avidity PATO:0045006 A behavioural quality of a process inhering in a bearer by virtue of the bearer's exhibiting normal or average activity. 2017-12-22T14:16:43Z quality PATO:0045007 normal behavioural activity PATO:0045007 A cellular motility which is normal or average. 2017-12-22T14:16:43Z quality PATO:0045008 normal cellular motility PATO:0045008 A coiling which is normal or average. 2017-12-22T14:16:43Z quality PATO:0045009 normal coiling PATO:0045009 A concentration which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045010 normal concentration PATO:0045010 A contractility which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045011 normal contractility PATO:0045011 A coordination which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045012 normal coordination PATO:0045012 A curvature which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045013 normal curvature PATO:0045013 A distance which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045014 normal distance PATO:0045014 An efficiency which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045015 normal efficiency PATO:0045015 An elasticity which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045016 normal elasticity PATO:0045016 A fecundity which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045017 normal fecundity PATO:0045017 A female fertility which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045018 normal female fertility PATO:0045018 A female receptivity which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045019 normal female receptivity PATO:0045019 A fertility which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045020 normal fertility PATO:0045020 A flexibility which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045021 normal flexibility PATO:0045021 A fluid flow which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045022 normal fluid flow PATO:0045022 A fluorescence which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045023 normal fluorescence PATO:0045023 A force which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045024 normal force PATO:0045024 A fragility which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045025 normal fragility PATO:0045025 A life span which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045026 normal life span PATO:0045026 A magnetism which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045027 normal magnetism PATO:0045027 A male fertility which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045028 normal male fertility PATO:0045028 A male receptivity which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045029 normal male receptivity PATO:0045029 A mass which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045030 normal mass PATO:0045030 A density which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045031 normal mass density PATO:0045031 A mobility which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045032 normal mobility PATO:0045032 An odor quality of having relatively normal or average odor. 2017-12-22T14:16:43Z quality PATO:0045033 normal odor PATO:0045033 An osmolality which is relatively normal or average odor. 2017-12-22T14:16:43Z quality PATO:0045034 normal osmolality PATO:0045034 An osmolarity which is relatively normal or average odor. 2017-12-22T14:16:43Z quality PATO:0045035 normal osmolarity PATO:0045035 A permeability which is relatively normal or average. 2017-12-22T14:16:43Z quality PATO:0045036 normal permeability PATO:0045036 A quality inhering in a bearer by virtue of the bearer's being phosphorylated to a normal or average extent. 2017-12-22T14:16:43Z quality PATO:0045037 normal phosphorylation PATO:0045037 A photosensitivity which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045038 normal photosensitivity PATO:0045038 A degree of pigmentation quality which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045039 normal pigmentation PATO:0045039 A position which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045040 normal position PATO:0045040 An angle which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045041 normal angle to PATO:0045041 A distribution which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045042 normal distribution PATO:0045042 An elevation which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045043 normal elevation PATO:0045043 A pressure which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045044 normal pressure PATO:0045044 A radioactivity which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045045 normal radioactivity PATO:0045045 A radiopacity which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045046 normal radiopacity PATO:0045046 A resistance to a stimulus which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045047 normal resistance to PATO:0045047 A sensitivity to irradiation which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045048 normal sensitivity to irradiation PATO:0045048 A sensitivity toward an external stimulus which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045049 normal sensitivity toward PATO:0045049 A size quality which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045050 normal size PATO:0045050 An area which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045051 normal area PATO:0045051 A depth quality which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045052 normal depth PATO:0045052 A height which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045053 normal height PATO:0045053 A length quality which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045054 normal length PATO:0045054 A diameter which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045055 normal diameter PATO:0045055 An anterior-posterior diameter which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045056 normal anterior-posterior diameter PATO:0045056 A perimeter which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045057 normal perimeter PATO:0045057 A circumference which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045058 normal circumference PATO:0045058 A thickness which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045059 normal thickness PATO:0045059 A volume which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045060 normal volume PATO:0045060 A width which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045061 normal width PATO:0045061 A solubility which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045062 normal solubility PATO:0045062 A speed which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045063 normal speed PATO:0045063 A strength which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045064 normal strength PATO:0045064 A fatigability which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045065 normal fatigability PATO:0045065 A susceptibility toward an external stimulus which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045066 normal susceptibility toward PATO:0045066 A temperature which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045067 normal temperature PATO:0045067 A tendency which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045068 normal tendency PATO:0045068 A threshold which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045069 normal threshold PATO:0045069 A tolerance to an external stimulus which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045070 normal tolerance to PATO:0045070 A tonicity which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045071 normal tonicity PATO:0045071 A turgor which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045072 normal turgor PATO:0045072 A quality of a process that has a value that is normal or average. 2017-12-21T14:11:01Z quality PATO:0045073 normal process quality PATO:0045073 A variability which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045074 normal variability PATO:0045074 A variability of color which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045075 normal variability of color PATO:0045075 A variability of rate which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045076 normal variability of rate PATO:0045076 A variability of size which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045077 normal variability of size PATO:0045077 A variability of temperature which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045078 normal variability of temperature PATO:0045078 A velocity which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045079 normal velocity PATO:0045079 A virulence which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045080 normal virulence PATO:0045080 A viscosity which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045081 normal viscosity PATO:0045081 A waxiness which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045082 normal waxiness PATO:0045082 A wetness which is relatively normal or average 2017-12-22T14:16:43Z quality PATO:0045083 normal wetness PATO:0045083 A duration quality of a process which is relatively normal. quality PATO:0045084 normal duration PATO:0045084 A duration quality of temperature quality of a process which is relatively normal. quality PATO:0045085 normal duration of temperature PATO:0045085 An occurrence which is relatively normal. quality PATO:0045086 normal occurrence PATO:0045086 A frequency which is relatively normal. quality PATO:0045087 normal frequency PATO:0045087 A sensitivity of a process which is relatively normal. quality PATO:0045088 normal sensitivity of a process PATO:0045088 A sensitivity of occurrent to oxygen which is relatively normal. quality PATO:0045089 normal sensitivity of a process to oxygen PATO:0045089 The four cardinal directions or cardinal points are the directions north, east, south, and west, commonly denoted by their initials, N, E, S, W. East and west are at right angles to north and south, with east being in the clockwise direction of rotation from north and west being directly opposite east. 2017-12-22T14:16:43Z quality PATO:0045090 cardinal direction PATO:0045090 The four cardinal directions or cardinal points are the directions north, east, south, and west, commonly denoted by their initials, N, E, S, W. East and west are at right angles to north and south, with east being in the clockwise direction of rotation from north and west being directly opposite east. Wikipedia:http://en.wikipedia.org/wiki/Cardinal_direction North is one of the four compass points or cardinal directions. It is the opposite of south and is perpendicular to east and west. 2017-12-22T14:16:43Z quality PATO:0045091 north PATO:0045091 North is one of the four compass points or cardinal directions. It is the opposite of south and is perpendicular to east and west. Wikipedia:http://en.wikipedia.org/wiki/North East is one of the four cardinal directions or points of the compass. It is the opposite direction from west. 2017-12-22T14:16:43Z quality PATO:0045092 east PATO:0045092 East is one of the four cardinal directions or points of the compass. It is the opposite direction from west. Wikipedia:http://en.wikipedia.org/wiki/East South is one of the four cardinal directions or compass points. South is the polar opposite of north and is perpendicular to east and west. 2017-12-22T14:16:43Z quality PATO:0045093 south PATO:0045093 South is one of the four cardinal directions or compass points. South is the polar opposite of north and is perpendicular to east and west. Wikipedia:http://en.wikipedia.org/wiki/South West is one of the four cardinal directions or points of the compass. It is the opposite direction from east. 2017-12-22T14:16:43Z quality PATO:0045094 west PATO:0045094 West is one of the four cardinal directions or points of the compass. It is the opposite direction from east. Wikipedia:http://en.wikipedia.org/wiki/West The number of repeated events per unit time, occurring in a repeating series. (e.g. the number of heart beats occurring over 1 minute) quality PATO:0050000 rate of occurence PATO:0050000 The number of repeated events per unit time, occurring in a repeating series. (e.g. the number of heart beats occurring over 1 minute) https://orcid.org/0000-0002-9943-9018 The rate of output of a continuous process. Example include: growth rate, cell migration rate, enzyme reaction rate. quality PATO:0050001 rate of continuous process PATO:0050001 The rate of output of a continuous process. Example include: growth rate, cell migration rate, enzyme reaction rate. https://orcid.org/0000-0002-9943-9018 A spatial distribution of a process in which the process occupies a smaller length, area, or volume than the reference process. For example, heterochromatin may form over a shorter length of a chromosome in a mutant than in wild type. 2019-07-29T14:22:24Z quality PATO:0055001 decreased spatial extent of a process PATO:0055001 A spatial distribution of a process in which the process occupies a smaller length, area, or volume than the reference process. For example, heterochromatin may form over a shorter length of a chromosome in a mutant than in wild type. https://orcid.org/0000-0003-4148-4606 A spatial distribution of a process in which the process occupies a greater length, area, or volume than the reference process. For example, heterochromatin may form over a shorter length of a chromosome in a mutant than in wild type. 2019-07-29T14:23:31Z quality PATO:0055002 increased spatial extent of a process PATO:0055002 A spatial distribution of a process in which the process occupies a greater length, area, or volume than the reference process. For example, heterochromatin may form over a shorter length of a chromosome in a mutant than in wild type. https://orcid.org/0000-0003-4148-4606 A rate of occurrence that is relatively high. 2020-08-19T09:23:19Z quality PATO:0055003 increased rate of occurrence PATO:0055003 A rate of occurrence that is relatively high. https://orcid.org/0000-0003-4148-4606 A rate of occurrence that is relatively low. 2020-08-19T09:24:35Z quality PATO:0055004 decreased rate of occurrence PATO:0055004 A rate of occurrence that is relatively low. https://orcid.org/0000-0003-4148-4606 A rate of output of a continuous process that is relatively high. 2020-08-19T09:24:56Z quality PATO:0055005 increased rate of continuous process PATO:0055005 A rate of output of a continuous process that is relatively high. https://orcid.org/0000-0003-4148-4606 A rate of output of a continuous process that is relatively low. 2020-08-19T09:25:07Z quality PATO:0055006 decreased rate of continuous process PATO:0055006 A rate of output of a continuous process that is relatively low. https://orcid.org/0000-0003-4148-4606 A quality inhering in a bearer by virtue of the bearer's being present in one sex and absent from the other in members of the same species. 2019-08-23T08:46:30Z quality PATO:0060001 sex-specific PATO:0060001 A quality inhering in a bearer by virtue of the bearer's being present in one sex and absent from the other in members of the same species. http://orcid.org/0000-0002-1373-1705 A quality inhering in a bearer by virtue of the bearer's being present in males and absent from females in members of the same species. 2019-08-23T08:49:59Z quality PATO:0060002 male-specific PATO:0060002 A quality inhering in a bearer by virtue of the bearer's being present in males and absent from females in members of the same species. http://orcid.org/0000-0002-1373-1705 A quality inhering in a bearer by virtue of the bearer's being present in females and absent from males in members of the same species. 2019-08-23T08:51:22Z quality PATO:0060003 female-specific PATO:0060003 A quality inhering in a bearer by virtue of the bearer's being present in females and absent from males in members of the same species. http://orcid.org/0000-0002-1373-1705 The breakdown, disintegration, destruction of an entity due to the breaking of cell membranes by any means. quality PATO:0065001 lysed PATO:0065001 The breakdown, disintegration, destruction of an entity due to the breaking of cell membranes by any means. https://en.wikipedia.org/wiki/Lysis A degree of pigmentation quality that is diversified with patches, or irregularity. quality PATO:0065002 patchy pigmentation PATO:0065002 A degree of pigmentation quality that is diversified with patches, or irregularity. https://medlineplus.gov/ency/article/003224.htm A hermaphroditic quality that inheres in a population or organism where an organism changes is a different sexes during different life stages. sequential hermaphroditic quality PATO:0070000 Sequential hermaphrodity is generally characterized by an organism producing female gametes and male gametes during different life stages. sequential hermaphrodite PATO:0070000 A hermaphroditic quality that inheres in a population or organism where an organism changes is a different sexes during different life stages. http://orcid.org/0000-0002-2908-3327 https://en.wikipedia.org/wiki/Sequential_hermaphroditism https://orcid.org/0000-0001-8815-0078 A cell morphology that inheres in neurons which have a small round soma, a large number of short, smooth, or slightly beaded primary dendrites that give rise to only a few secondary branches, and a branched axon that establishes a dense axonal mesh with thin shafts. ilxtr:NeurogliaformPhenotype quality PATO:0070001 neurogliaform morphology PATO:0070001 A cell morphology that inheres in neurons which have a small round soma, a large number of short, smooth, or slightly beaded primary dendrites that give rise to only a few secondary branches, and a branched axon that establishes a dense axonal mesh with thin shafts. PMID:17122314 A cell morphology that inheres in multipolar neurons with densely branched terminal axonal arborizations that form basket-like structures surrounding and synapsing to the somas of target cells. ILX:0101123 ilxtr:BasketPhenotype nifext:3 quality PATO:0070002 basket cell morphology PATO:0070002 A cell morphology that inheres in multipolar neurons with densely branched terminal axonal arborizations that form basket-like structures surrounding and synapsing to the somas of target cells. WikipediaVersioned:Basket_cell&oldid=951703880 doi:10.1016/b978-0-12-369497-3.10004-4 A basket cell morphology that inheres in neurons with axonal arbors composed of frequent, short, curvy axonal branches that tend to be near their somata and within the same layer. ilxtr:SmallBasketPhenotype quality PATO:0070003 small basket cell morphology PATO:0070003 A basket cell morphology that inheres in neurons with axonal arbors composed of frequent, short, curvy axonal branches that tend to be near their somata and within the same layer. PMID:11884355 A basket cell morphology that inheres in neurons that are large, and typically ascend to give rise to many long horizontally and vertically projecting axon collaterals that traverse neighboring columns and can extend through all cortical layers. ilxtr:LargeBasketPhenotype quality PATO:0070004 large basket cell morphology PATO:0070004 A basket cell morphology that inheres in neurons that are large, and typically ascend to give rise to many long horizontally and vertically projecting axon collaterals that traverse neighboring columns and can extend through all cortical layers. PMID:11884355 A basket cell morphology that inheres in neurons which have simpler dendritic arbors (compared to small or large basket cell morphology), and an axonal plexus of intermediate density, composed of a few long, smooth axonal branches. ilxtr:NestBasketPhenotype quality PATO:0070005 nest basket cell morphology PATO:0070005 A basket cell morphology that inheres in neurons which have simpler dendritic arbors (compared to small or large basket cell morphology), and an axonal plexus of intermediate density, composed of a few long, smooth axonal branches. PMID:11884355 A cell morphology that inheres in neurons which have two principal dendrites that emerge from the soma and begin to branch some distance from it, have few spines, and branch in narrow fields. This is in contrast to bitufted morphology where branching occurs close to the soma. ILX:0101312 ilxtr:BipolarPhenotype nifext:2 quality PATO:0070006 This is specific to cortical bipolar cells and are distinguished from retinal bipolar cell morphology which has an axon and dendrite emerging from opposite ends of the soma. cortical bipolar morphology PATO:0070006 A cell morphology that inheres in neurons which have two principal dendrites that emerge from the soma and begin to branch some distance from it, have few spines, and branch in narrow fields. This is in contrast to bitufted morphology where branching occurs close to the soma. PMID:18568015 doi:10.1016/b978-0-12-369497-3.10004-4 A cell morphology that inheres in neurons which are large and non-spiny, with dendrites radiating in a multipolar or bitufted pattern, often favouring the descending side, and axons that ascend directly from the superficial side of the soma, and travel upward without branching. ilxtr:MartinottiPhenotype quality PATO:0070007 Martinotti morphology PATO:0070007 A cell morphology that inheres in neurons which are large and non-spiny, with dendrites radiating in a multipolar or bitufted pattern, often favouring the descending side, and axons that ascend directly from the superficial side of the soma, and travel upward without branching. doi:10.1016/b978-0-12-369497-3.10004-4 A Martinotti cell morphology that inheres in neurons which have axons that form a horizontal ramification, making it T-shaped. 'T-shaped' Martinotti morphology quality PATO:0070008 T Martinotti morphology PATO:0070008 A Martinotti cell morphology that inheres in neurons which have axons that form a horizontal ramification, making it T-shaped. doi:10.1016/b978-0-12-369497-3.10004-4 A Martinotti cell morphology that inheres in neurons which have axons that form a fan-like plexus. 'fanning-out' Martinotti morphology quality PATO:0070009 fan Martinotti morphology PATO:0070009 A Martinotti cell morphology that inheres in neurons which have axons that form a fan-like plexus. doi:10.1016/b978-0-12-369497-3.10004-4 A cell morphology that inheres in neurons that have dendritic processes radiating from the cell body forming a star-like shape. ILX:0111036 SAO:9271919883 quality PATO:0070010 stellate morphology PATO:0070010 A cell morphology that inheres in neurons that have dendritic processes radiating from the cell body forming a star-like shape. ISBN:9780123973481 A cell morphology that inheres in neurons which are small and round, and make highly specialized synapses with the axon initial segments of pyramidal neurons, wrapping them with candle-shaped synaptic 'cartridges'. ILX:0102028 ilxtr:ChandelierPhenotype nifext:4 quality PATO:0070011 Chandelier cells can be bitufted or multipolar. chandelier cell morphology PATO:0070011 A cell morphology that inheres in neurons which are small and round, and make highly specialized synapses with the axon initial segments of pyramidal neurons, wrapping them with candle-shaped synaptic 'cartridges'. doi:10.1016/b978-0-12-369497-3.10004-4 Chandelier cells can be bitufted or multipolar. DOI:10.1016/B978-0-12-369497-3.10004-4 A cell morphology that inheres in neurons which have two clusters of primary dendrites that originate directly and extend from opposite ends of the soma, and axons that form a plexus which spreads widely. Compared to the narrow vertical axonal projection of bipolar morphology, and the 'horse-tail' axonal cluster of double boquet cells, bitufted morphology has wide horizontal axonal spans, and branching that occur close to the soma. Their vertical projection is also less extensive and crosses mostly to neighboring layers. ilxtr:BituftedPhenotype quality PATO:0070012 bitufted cell morphology PATO:0070012 A cell morphology that inheres in neurons which have two clusters of primary dendrites that originate directly and extend from opposite ends of the soma, and axons that form a plexus which spreads widely. Compared to the narrow vertical axonal projection of bipolar morphology, and the 'horse-tail' axonal cluster of double boquet cells, bitufted morphology has wide horizontal axonal spans, and branching that occur close to the soma. Their vertical projection is also less extensive and crosses mostly to neighboring layers. PMID:15378039 PMID:18568015 doi:10.1016/b978-0-12-369497-3.10004-4 A cell morphology that inheres in neurons which have spiny basal dendrites and resemble pyramidal cells but lose their apical dendrites as they mature. Their axons nearly always emerge from the descending side of the soma, but often recurve and ascend with arc-like collaterals. ilxtr:SpinyStellatePhenotype quality PATO:0070013 spiny stellate cell morphology PATO:0070013 A cell morphology that inheres in neurons which have spiny basal dendrites and resemble pyramidal cells but lose their apical dendrites as they mature. Their axons nearly always emerge from the descending side of the soma, but often recurve and ascend with arc-like collaterals. doi:10.1016/b978-0-12-369497-3.10004-4 A cell morphology that inheres in neurons which have a pyramidal shaped soma, a single axon, a large apical dendrite and multiple basal dendrites. ILX:0109553 SAO:1465673360 quality PATO:0070015 pyramidal family morphology PATO:0070015 A cell morphology that inheres in neurons which have a pyramidal shaped soma, a single axon, a large apical dendrite and multiple basal dendrites. doi:10.1016/b978-0-12-369497-3.10004-4 A pyramidal family morphology that inheres in neurons which have an apical tree which is oriented parallel to the pia. ilxtr:HorizontalPyramidalPhenotype quality PATO:0070016 horizontal pyramidal morphology PATO:0070016 A pyramidal family morphology that inheres in neurons which have an apical tree which is oriented parallel to the pia. PMID:30715238 A pyramidal family morphology that inheres in neurons which have a standard pyramidal shape with its apical dendrite aligned vertically. ilxtr:PyramidalPhenotype pyramidal cell morphology vertical pyramidal morphology quality PATO:0070017 standard pyramidal morphology PATO:0070017 A pyramidal family morphology that inheres in neurons which have a standard pyramidal shape with its apical dendrite aligned vertically. doi:10.1016/b978-0-12-369497-3.10004-4 A pyramidal cell morphology that inheres in neurons which have a distinct tuft formation, distal from the soma. ilxtr:TuftedPyramidalPhenotype quality PATO:0070018 tufted pyramidal morphology PATO:0070018 A pyramidal cell morphology that inheres in neurons which have a distinct tuft formation, distal from the soma. PMID:30715238 A pyramidal cell morphology that inheres in neurons which lack a clear tuft formation but extend to large radial distances. ilxtr:UntuftedPyramidalPhenotype quality PATO:0070019 untufted pyramidal morphology PATO:0070019 A pyramidal cell morphology that inheres in neurons which lack a clear tuft formation but extend to large radial distances. PMID:30715238 A pyramidal cell morphology that inheres in neurons which lack a tuft formation but extend to small radial distances forming a star-like shape. ilxtr:StarPyramidalPhenotype quality PATO:0070020 stellate pyramidal morphology PATO:0070020 A pyramidal cell morphology that inheres in neurons which lack a tuft formation but extend to small radial distances forming a star-like shape. PMID:30715238 A pyramidal cell morphology that inheres in neurons which have an apical tree which is oriented towards the white matter. ilxtr:InvertedPyramidalPhenotype quality PATO:0070021 inverted pyramidal morphology PATO:0070021 A pyramidal cell morphology that inheres in neurons which have an apical tree which is oriented towards the white matter. PMID:30715238 A cell morphology that inheres in neurons with only one process, a neurite, that extends from the cell body. The neurite then branches to form dendritic and axonal processes. quality PATO:0070025 unipolar neuron morphology PATO:0070025 A cell morphology that inheres in neurons with only one process, a neurite, that extends from the cell body. The neurite then branches to form dendritic and axonal processes. WikipediaVersioned:Unipolar_neuron&oldid=994458581 A cell morphology that inheres in neurons which possess three or more neurites, usually a single axon and many dendrites and dendritic branches. ILX:0107196 NLX:378 quality PATO:0070026 multipolar neuron morphology PATO:0070026 A cell morphology that inheres in neurons which possess three or more neurites, usually a single axon and many dendrites and dendritic branches. WikipediaVersioned:Multipolar_neuron&oldid=1022942606 A cell morphology that inheres in neurons with dendrites that are bidirectional, emerging from opposite ends of the soma, with the two arbors extending in radial or tangential directions. quality PATO:0070027 This morphology type is distinct from bitufted cell morphology in that it refers to bitufted dendrite morphology rather than bitufted cell morphology. bitufted dendrite cell morphology PATO:0070027 A cell morphology that inheres in neurons with dendrites that are bidirectional, emerging from opposite ends of the soma, with the two arbors extending in radial or tangential directions. PMID:18568015 A neuron projection quality that is a characteristic of neurons whose soma is located in the telencephalon and that project to structures outside the telencephalon ILX:0770101 ET projecting quality PATO:0070028 extratelencephalic projecting PATO:0070028 A neuron projection quality that is a characteristic of neurons whose soma is located in the telencephalon and that project to structures outside the telencephalon DOI:10.1101/2020.10.19.343129 A neuron projection quality that is a characteristic of neurons with soma in the cerebral cortex and projections to the thalamus. ILX:0770102 CT projecting quality PATO:0070029 corticothalamic projecting PATO:0070029 A neuron projection quality that is a characteristic of neurons with soma in the cerebral cortex and projections to the thalamus. DOI:10.1101/2020.10.19.343129 A neuron projection quality that is a characteristic of neurons with projections that terminate locally rather than distantly. ILX:0770103 NP quality PATO:0070030 near projecting PATO:0070030 A neuron projection quality that is a characteristic of neurons with projections that terminate locally rather than distantly. DOI:10.1101/2020.10.19.343129 A neuron projection quality that is a characteristic of neurons that project to the medulla oblongata from other brain regions. MY projecting quality PATO:0070031 corticomedulla projecting PATO:0070031 A neuron projection quality that is a characteristic of neurons that project to the medulla oblongata from other brain regions. DOI:10.1101/2020.10.19.343129 A physical quality inhering in a neuron by virtue of the relative location of its soma and the regions to which it projects and makes synaptic contacts in. quality PATO:0070033 neuron projection quality PATO:0070033 A physical quality inhering in a neuron by virtue of the relative location of its soma and the regions to which it projects and makes synaptic contacts in. DOI:10.1101/2020.10.19.343129 A neuron projection quality that is a characteristic of neurons with both soma and projections entirely within the telencephalon. ILX:0770100 IT projecting quality PATO:0070034 intratelencephalic projecting PATO:0070034 A neuron projection quality that is a characteristic of neurons with both soma and projections entirely within the telencephalon. DOI:10.1101/2020.10.19.343129 A quality inhering in a neuron's dendrites by virtue of the bearer's physical composition. ILX:0103022 quality PATO:0070036 dendrite quality PATO:0070036 A dendrite quality inhering in a neuron by virtue of the bearer's dendrite having spines. ILX:0110980 quality PATO:0070038 spiny dendrite quality PATO:0070038 A dendrite quality inhering in a neuron by virtue of the bearer's dendrite having a terminal tuft. ILX:0112065 SAO:754373097 quality PATO:0070039 tufted dendrite quality PATO:0070039 A dendrite quality inhering in a neuron by virtue of the bearer's dendrite having a terminal tuft. ILX:0112065 A dendrite quality inhering in a neuron by virtue of the bearer's dendrite having few or no recognizable dendritic spines. ILX:0100932 SAO:128827344 quality PATO:0070040 aspiny dendrite quality PATO:0070040 A dendrite quality inhering in a neuron by virtue of the bearer's dendrite having few or no recognizable dendritic spines. ILX:0100932 A dendrite quality inhering in a neuron by virtue of the bearer's dendrite having numerous swellings or varicosities along their length. ILX:0112263 SAO:1706854098 quality PATO:0070041 varicose dendrite quality PATO:0070041 A dendrite quality inhering in a neuron by virtue of the bearer's dendrite having numerous swellings or varicosities along their length. ILX:0112263 A cell morphology that inheres in retinal neurons which have two principal fibres, an axon and a dendrite, that emerge from opposite end the soma. quality PATO:0070042 This is distinct from cortical bipolar morphology which has two dendrites emerging from opposite ends of the soma, rather than one axon and one dendrite. retinal bipolar morphology PATO:0070042 A cell morphology that inheres in retinal neurons which have two principal fibres, an axon and a dendrite, that emerge from opposite end the soma. WikipediaVersioned:Retina_bipolar_cell&oldid=1033254616 A quality of continuant that exist at the anatomical level of organisation and anything under it. This includes, but is not limited to, cells , tissues, and components. http://orcid.org/0000-0001-7258-9596 quality PATO:0070044 anatomical structure quality PATO:0070044 A quality inhering in an anotomical structure by virtue of its capacity to be stained by specific histological dyes. http://orcid.org/0000-0001-7258-9596 quality PATO:0070045 anatomical histological quality PATO:0070045 An affinity inhering in an anatomical structure by virtue of the bearer exhibiting a molecular interaction that stains and colors, pale-pink, with Wright-Giemsa stain. http://orcid.org/0000-0001-7258-9596 quality PATO:0070046 neutrophillic PATO:0070046 An affinity inhering in an anatomical structure by virtue of the bearer exhibiting a molecular interaction that stains and colors, pale-pink, with Wright-Giemsa stain. GOC:add An affinity inhering in an anatomical structure by virtue of the bearer exhibiting a molecular interaction for both basic and acid stains under specific pH conditions. http://orcid.org/0000-0001-7258-9596 quality PATO:0070047 polychromatophilic PATO:0070047 An affinity inhering in an anatomical structure by virtue of the bearer exhibiting a molecular interaction for both basic and acid stains under specific pH conditions. GOC:add A texture quality inhering in a bearer by virtue of the bearer's being covered by iron oxide as a result of oxidation. quality PATO:0070059 rusty PATO:0070059 A texture quality inhering in a bearer by virtue of the bearer's being covered by iron oxide as a result of oxidation. WikipediaVersioned:Rust&oldid=1072363937 A quality of a substance on which or through which electromagnetic radiation impinges or traverses with respect to radiation. This substance quality changes the quality of the incident radiation with respect to any of: intensity, direction, scatter and wavelength. quality PATO:0070060 quality of interaction of a substance with electromagnetic radiation PATO:0070060 A quality of a substance on which or through which electromagnetic radiation impinges or traverses with respect to radiation. This substance quality changes the quality of the incident radiation with respect to any of: intensity, direction, scatter and wavelength. https://orcid.org/0000-0002-5111-7263 A cell morphology that inheres in neurons with bitufted dendritic morphology but with the special feature of a tight fascicular axonal cylinder that resembles a 'horse tail'. quality PATO:0070061 double bouquet morphology PATO:0070061 A cell morphology that inheres in neurons with bitufted dendritic morphology but with the special feature of a tight fascicular axonal cylinder that resembles a 'horse tail'. PMID:15378039 A cell morphology that inheres in neurons with dendrites that stratify at two and only two locations. quality PATO:0070062 bistratified dendrite cell morphology PATO:0070062 A cell morphology that inheres in neurons with dendrites that stratify at two and only two locations. PMID:34093409 A cell morphology that inheres in neurons with dendrites that stratify at one and only one location. quality PATO:0070063 monostratified dendrite cell morphology PATO:0070063 A cell morphology that inheres in neurons with dendrites that stratify at one and only one location. PMID:34093409 A 3-D extent quality inhering in a bearer by virtue of the spatial region that is defined by the maximal span of the bearer's dendritic arbor. quality PATO:0070064 dendritic field size PATO:0070064 A 3-D extent quality inhering in a bearer by virtue of the spatial region that is defined by the maximal span of the bearer's dendritic arbor. https://orcid.org/0000-0001-7258-9596 https://orcid.org/0000-0002-1373-1705 https://orcid.org/0000-0002-5260-9315 A physical quality inhering in an entity exhibiting the physical charachteristics of a material that flows under applied force. fluidity quality PATO:0080001 quality of a fluid PATO:0080001 A physical quality inhering in an entity exhibiting the physical charachteristics of a material that flows under applied force. WikipediaVersioned:Fluid&oldid=1049126570 An osmolarity quality inhering in a bearer by virtue of the total amount of ionic salts dissolved in the bearer. 2020-10-30T08:08:48Z quality PATO:0085001 salinity PATO:0085001 An osmolarity quality inhering in a bearer by virtue of the total amount of ionic salts dissolved in the bearer. http://db0nus869y26v.cloudfront.net/en/Salinity https://en.wikipedia.org/wiki/Salinity https://rwu.pressbooks.pub/webboceanography/chapter/5-3-salinity-patterns/ https://www.sciencedirect.com/referencework/9780080983004/treatise-on-geochemistry https://www.sciencedirect.com/science/article/pii/B9780857096807500012 Quotient (or ratio) of surface area of an organism divided by the mass of the same organism 2021-05-17T13:13:52Z quality PATO:0095001 organismal area to mass ratio PATO:0095001 An organismal quality inhering in a bearer by virtue of the bearer's morphological and physiological adaptation for running. 2021-05-17T13:19:15Z quality PATO:0095002 cursorial PATO:0095002 An organismal quality inhering in a bearer by virtue of the bearer's morphological and physiological adaptation for digging and living underground. 2021-05-17T13:19:57Z quality PATO:0095003 fossorial PATO:0095003 An organismal quality inhering in a bearer by virtue of the bearer's morphological and physiological adaptation for living in trees. 2021-05-17T13:20:31Z quality PATO:0095004 arboreal PATO:0095004 A quality of a process that happens during dawn and dusk. 2021-05-17T13:22:18Z quality PATO:0095005 crepuscular PATO:0095005 A quality of a process that happens during the hours of darkness. 2021-05-17T13:26:38Z quality PATO:0095006 nocturnal PATO:0095006 A quality of a process that happens during the hours of daylight. 2021-05-17T13:27:09Z quality PATO:0095007 diurnal PATO:0095007 An organismal quality inhering in a bearer by virtue of the bearer's morphological and physiological adaptation for participating in long-distance movement of conspecifics, usually on a seasonal basis. 2021-05-17T13:28:09Z quality PATO:0095008 migratory PATO:0095008 An organismal quality inhering in a bearer by virtue of the bearer's ability to burrow more than 20 cm deep into the soil and make permanent, vertical burrows. 2021-05-17T13:28:41Z quality PATO:0095009 anecic PATO:0095009 A quality of an entity that can be represented numerically, including anything that can be counted, measured, or given a numerical value. https://orcid.org/0000-0001-8314-2140 quality PATO:0103000 quantitative PATO:0103000 A quality of an entity that can be represented numerically, including anything that can be counted, measured, or given a numerical value. https://libguides.macalester.edu/c.php?g=527786&p=3608639 https://www.nnlm.gov/guides/data-glossary/quantitative-data A quantitative quality that represents the sum of all 'mass' qualities of the component parts that constitute a whole entity. The total mass quality inheres in the whole entity and reflects the aggregate measure of mass across all its components, such that changes in the mass of individual components may not necessarily correspond to equivalent changes in the total mass of the whole. Example of usage: "total body mass" represents the sum of the masses of all tissues and organs in the body, while "liver mass" represents only the mass of the liver. An increase in liver mass does not necessarily mean an increase in total body mass, as the mass of other organs or tissues may decrease simultaneously. 2025-04-10T16:14:12Z quality PATO:0103001 total mass PATO:0103001 A total mass which is higher than normal or average. 2025-04-10T16:25:35Z quality PATO:0103002 increased total mass PATO:0103002 A total mass which is lower than normal or average. 2025-04-10T16:29:00Z quality PATO:0103003 decreased total mass PATO:0103003 A quantitative quality that represents the sum of all 'amount' qualities of the component parts that constitute a whole entity. The total amount quality inheres in the whole entity and reflects the aggregate measure across all its components, such that changes in the amount of individual components may not necessarily correspond to equivalent changes in the total amount of the whole. Example of usage: "blood total protein amount" represents the sum of the amounts of all protein types in blood, while "blood leptin amount" represents only the amount of leptin proteins. An increase in blood leptin amount does not necessarily mean an increase in blood total protein amount, as other protein levels may decrease simultaneously. 2025-04-10T16:33:09Z quality PATO:0103004 total amount PATO:0103004 A total amount which is relatively low. 2025-04-10T16:36:36Z quality PATO:0103005 decreased total amount PATO:0103005 A total amount which is relatively high. 2025-04-10T16:37:33Z quality PATO:0103006 increased total amount PATO:0103006 PCO:0000000 A material entity that consists of two or more organisms, viruses, or viroids. May be of the same or different species. collection of organisms PCO:0000001 A collection of organisms, all of the same species, that live in the same place. It is sometimes difficult to define the physical boundaries of a population. In the case of sexually reproducing organisms, the individuals within a population have the potential to reproduce with one another during the course of their lifetimes. 'Community', as often used to describe a group of humans, is a type of population of organisms. Classes for population already exist in IDO ('organism population', IDO_0000509) and OBI ('population', OBI_0000181). The definitions should be standardized across OBO Foundry ontologies and only one term used. population of organisms PCO:0000002 A multi-species collection of organisms of at least two different species, living in a particular area. Must have at least two populations of different species as members. Ecological community is defined broadly here, but includes both ecological interactions (inherited from parent term community) and spatial co-existence. It may be used to describe every organisms living in an area, but is often used to refer only to organisms of a particular taxon or guild (e.g., the plant community, the insect community, the herbivore community). The word community, as it often used to describe a group of humans living together, is a type of single-species collection of organisms, not an ecological community. ecological community PCO:0000003 A quality that inheres in a population of organisms. Includes qualities like population size, population growth rate, carrying capacity, immigration rate, emigration rate, fecundity, and death rate. A population quality may depend on the qualities of individual organisms in the population, but cannot be measured or described for a single organism. This term may be replaced by a PATO term. quality of a population PCO:0000004 A quality that inheres in a community. Includes qualities like diversity, species richness, stability, resilience, community structure, number of trophic levels. A community quality may depend on the qualities of individual organism in the community, but cannot be measured or described for a single individual. quality of an ecological community PCO:0000018 A material entity that has as parts two or more organisms, viruses, or viroids of the same species and no members of any other species. single-species collection of organisms 2 PCO:0000029 A collection of organisms that consists of two or more organisms from at least two species. multi-species collection of organisms PCO:0000031 A material entity that is one or more organisms, viruses or viroids. organismal entity An amino acid chain that is produced de novo by ribosome-mediated translation of a genetically-encoded mRNA, and any derivatives thereof. natural protein native protein protein PR:000000001 The definition above excludes protein complexes, which some also consider a protein. Those who wish to refer to a class representing both senses of the word are directed to CHEBI:36080. Note that the definition allows for experimentally-manipulated genes, and allows for artifically-produced derivatives that mimic those found naturally. Proteins (in the sense defined here) that descended from a common ancestor can be classified into families and superfamilies composed of products of evolutionarily-related genes. The domain architecture of a protein is described by the order of its constituent domains. Proteins with the same domains in the same order are defined as homeomorphic [PRO:WCB). protein PR:000000001 An amino acid chain that is produced de novo by ribosome-mediated translation of a genetically-encoded mRNA, and any derivatives thereof. PRO:DAN PRO:WCB natural protein PRO:DAN native protein IEDB:BP A protein that is a translation product of the human CD19 gene or a 1:1 ortholog thereof. It is composed of an N-terminal extracellular domain containing two Ig-like C2-type (immunoglobulin-like) domains, followed by a single-pass transmembrane segment and a cytoplasmic C-terminal tail. CD19 expression is restricted to members of the B cell lineage. It functions as a co-receptor for B-cell antigen receptor (BCR), regulating signal transduction. IUPHARobj:2764 PIRSF:PIRSF016630 B-lymphocyte surface antigen B4 T-cell surface antigen Leu-12 differentiation antigen CD19 protein PR:000001002 Category=gene. Requested by=CL. CD19 molecule PR:000001002 A protein that is a translation product of the human CD19 gene or a 1:1 ortholog thereof. It is composed of an N-terminal extracellular domain containing two Ig-like C2-type (immunoglobulin-like) domains, followed by a single-pass transmembrane segment and a cytoplasmic C-terminal tail. CD19 expression is restricted to members of the B cell lineage. It functions as a co-receptor for B-cell antigen receptor (BCR), regulating signal transduction. PMID:15778510 A protein that is a translation product of the human CD34 gene or a 1:1 ortholog thereof. It is a leukocyte membrane protein expressed specifically by lymphohematopoietic progenitor cells. It contains a single-pass transmembrane domain and that show distinct expression on early hematopoietic precursors and vascular-associated tissue. Acts as a scaffold that presents selectin carbohydrate ligands in a clustered, tissue specific manner to allow for higher avidity interactions between leukocytes and endothelial cells during the inflammatory process. In common with related sialomucins (endoglycan and podocalyxin), the extracellular region is dominated by an N-terminal mucin-like domain, which is densely substituted with sialylated O-linked carbohydrates. The mucin-like region is followed by a cysteine-containing and presumably globular domain. This domain may fold into an immunoglobulin-like structure as the positions of 2 of the cysteines are conserved in the C2 set of the immunoglobulin superfamily. The cytoplasmic domain is around 73-76 residues long and highly conserved. PIRSF:PIRSF028749 hematopoietic progenitor cell antigen CD34 protein PR:000001003 Category=gene. Requested by=CL. CD34 molecule PR:000001003 A protein that is a translation product of the human CD34 gene or a 1:1 ortholog thereof. It is a leukocyte membrane protein expressed specifically by lymphohematopoietic progenitor cells. It contains a single-pass transmembrane domain and that show distinct expression on early hematopoietic precursors and vascular-associated tissue. Acts as a scaffold that presents selectin carbohydrate ligands in a clustered, tissue specific manner to allow for higher avidity interactions between leukocytes and endothelial cells during the inflammatory process. In common with related sialomucins (endoglycan and podocalyxin), the extracellular region is dominated by an N-terminal mucin-like domain, which is densely substituted with sialylated O-linked carbohydrates. The mucin-like region is followed by a cysteine-containing and presumably globular domain. This domain may fold into an immunoglobulin-like structure as the positions of 2 of the cysteines are conserved in the C2 set of the immunoglobulin superfamily. The cytoplasmic domain is around 73-76 residues long and highly conserved. PMID:16720896 PMID:8983065 A protein that is a translation product of the human CD4 gene or a 1:1 ortholog thereof. CD4 is an accessory protein for MHC class-II antigen/T-cell receptor interaction. It is the primary receptor for HIV-1. CD4 has four immunoglobulin-like domains in its extracellular region that share the same structure, but can differ in sequence. PIRSF:PIRSF001977 T-cell differentiation antigen L3T4 T-cell surface antigen T4/Leu-3 T-cell surface glycoprotein CD4 protein PR:000001004 Category=gene. Requested by=CL. CD4 molecule PR:000001004 A protein that is a translation product of the human CD4 gene or a 1:1 ortholog thereof. CD4 is an accessory protein for MHC class-II antigen/T-cell receptor interaction. It is the primary receptor for HIV-1. CD4 has four immunoglobulin-like domains in its extracellular region that share the same structure, but can differ in sequence. PMID:15326605 An integrin alpha that contains an A domain. A hallmark of this class is the presence of a von Willebrand factor type A domain (Pfam:PF00092) (I-domain) of approximately 200 amino acid residues at the N terminus, which confers divalent cation binding properties. Unlike other integrin alpha proteins, they do not undergo proteolytic cleavage. PIRSF:PIRSF002497 integrin alpha with I domain protein PR:000001005 Category=family. integrin alpha with A domain PR:000001005 An integrin alpha that contains an A domain. A hallmark of this class is the presence of a von Willebrand factor type A domain (Pfam:PF00092) (I-domain) of approximately 200 amino acid residues at the N terminus, which confers divalent cation binding properties. Unlike other integrin alpha proteins, they do not undergo proteolytic cleavage. PIRSF:PIRSF002497 An integrin alpha with A domain that is a translation product of the human ITGAM gene or a 1:1 ortholog thereof. They constitute subunits of the integrin alpha-M/beta-2 receptor. This receptor is implicated in various adhesive interactions of monocytes, macrophages and granulocytes as well as in mediating the uptake of complement-coated particles. It is also a receptor for fibrinogen, factor X and ICAM1. IUPHARobj:2452 CD11 antigen-like family member B CD11b CR-3 alpha chain cell surface glycoprotein MAC-1 subunit alpha leukocyte adhesion receptor MO1 neutrophil adherence receptor protein PR:000001012 Category=gene. Requested by=CL. integrin alpha-M PR:000001012 An integrin alpha with A domain that is a translation product of the human ITGAM gene or a 1:1 ortholog thereof. They constitute subunits of the integrin alpha-M/beta-2 receptor. This receptor is implicated in various adhesive interactions of monocytes, macrophages and granulocytes as well as in mediating the uptake of complement-coated particles. It is also a receptor for fibrinogen, factor X and ICAM1. UniProtKB:P11215 A protein that has a core domain composition consisting of an extracellular N-terminal domain that adopts an immunoglobulin fold, a transmembrane domain, and an intracellular C-terminal domain with a single copy of the Immunoreceptor tyrosine-based activation motif (Pfam:PF02189) (ITAM). It constitutes the invariant subunit of the T cell antigen receptor (TCR). TCR is a surface receptor on T cells responsible for recognizing MHC-restricted antigens and initiating the cellular immune response. PIRSF:PIRSF001993 CD3 subunit with Ig-like domain protein PR:000001018 Category=family. CD3 subunit with immunoglobulin domain PR:000001018 A protein that has a core domain composition consisting of an extracellular N-terminal domain that adopts an immunoglobulin fold, a transmembrane domain, and an intracellular C-terminal domain with a single copy of the Immunoreceptor tyrosine-based activation motif (Pfam:PF02189) (ITAM). It constitutes the invariant subunit of the T cell antigen receptor (TCR). TCR is a surface receptor on T cells responsible for recognizing MHC-restricted antigens and initiating the cellular immune response. PMID:16473826 PMID:1724736 A CD3 subunit with immunoglobulin domain that is a translation product of the human CD3E gene or a 1:1 ortholog thereof. IUPHARobj:2742 CD3e T-cell surface antigen T3/Leu-4 epsilon chain protein PR:000001020 Category=gene. Requested by=CL. CD3 epsilon PR:000001020 A CD3 subunit with immunoglobulin domain that is a translation product of the human CD3E gene or a 1:1 ortholog thereof. PRO:CNA A protein with a domain composition consisting of a large extracellular domain, including five Ig-like C2-type domains followed by two copies of the Fibronectin type-III domain (Pfam:PF00041), a single-pass transmembrane domain and a short cytoplasmic C-terminal domain. PIRSF:PIRSF002507 protein PR:000001022 Category=family. neural cell adhesion molecule PR:000001022 A protein with a domain composition consisting of a large extracellular domain, including five Ig-like C2-type domains followed by two copies of the Fibronectin type-III domain (Pfam:PF00041), a single-pass transmembrane domain and a short cytoplasmic C-terminal domain. PRO:CNA A neural cell adhesion molecule that is involved in neuronal development, synaptic plasticity, and regeneration. PIRSF:PIRSF501037 protein PR:000001023 Category=family. neural cell adhesion molecule NCAM PR:000001023 A neural cell adhesion molecule that is involved in neuronal development, synaptic plasticity, and regeneration. PMID:17975827 A neural cell adhesion molecule NCAM that is a translation product of the human NCAM1 gene or a 1:1 ortholog thereof. IUPHARobj:2769 CD56 N-CAM-1 NCAM-1 protein PR:000001024 Category=gene. Requested by=CL. neural cell adhesion molecule 1 PR:000001024 A neural cell adhesion molecule NCAM that is a translation product of the human NCAM1 gene or a 1:1 ortholog thereof. PRO:CNA A protein that is a translation product of the human CD2 gene or a 1:1 ortholog thereof. IUPHARobj:2600 PIRSF:PIRSF001984 LFA-2 LFA-3 receptor T-cell surface antigen CD2 T-cell surface antigen T11/Leu-5 T-cell surface glycoprotein CD2 erythrocyte receptor ly-37 lymphocyte antigen 37 rosette receptor protein PR:000001083 Category=gene. Requested by=CL. CD2 molecule PR:000001083 A protein that is a translation product of the human CD2 gene or a 1:1 ortholog thereof. PRO:CNA A protein that is a translation product of the human CD8A gene or a 1:1 ortholog thereof. CD8 is a transmembrane that is a co-receptor for MHC class-I antigen/T-cell receptor interaction. The most common form of CD8 is composed of a CD8 alpha and a CD8 beta chain. CD8a T-cell surface glycoprotein Lyt-2 T-lymphocyte differentiation antigen T8/Leu-2 protein PR:000001084 Category=gene. Requested by=CL. T-cell surface glycoprotein CD8 alpha chain PR:000001084 A protein that is a translation product of the human CD8A gene or a 1:1 ortholog thereof. CD8 is a transmembrane that is a co-receptor for MHC class-I antigen/T-cell receptor interaction. The most common form of CD8 is composed of a CD8 alpha and a CD8 beta chain. PMID:11114424 PRO:CNA Wikipedia:CD8 A protein that is a translation product of the human MS4A1 gene or a 1:1 ortholog thereof. IUPHARobj:2628 PIRSF:PIRSF001995 B-cell differentiation antigen Ly-44 B-cell surface antigen CD20 B-lymphocyte antigen CD20 B-lymphocyte surface antigen B1 Bp35 leukocyte surface antigen Leu-16 lymphocyte antigen 44 protein PR:000001289 Category=gene. Requested by=CL. membrane-spanning 4-domains subfamily A member 1 PR:000001289 A protein that is a translation product of the human MS4A1 gene or a 1:1 ortholog thereof. PRO:WCB A protein that has a core domain structure of signal sequence, propeptide, five Cadherin domains (Pfam:PF00028), a transmembrane region, and a Cadherin cytoplasmic region (Pfam:PF01049). Cadherins function as adhesion molecules that mediate Ca2+-dependent cell-cell adhesion in solid tissues. PIRSF:PIRSF002504 protein PR:000001327 Category=family. cadherin PR:000001327 A protein that has a core domain structure of signal sequence, propeptide, five Cadherin domains (Pfam:PF00028), a transmembrane region, and a Cadherin cytoplasmic region (Pfam:PF01049). Cadherins function as adhesion molecules that mediate Ca2+-dependent cell-cell adhesion in solid tissues. PRO:WCB A cadherin that is a translation product of the human CDH5 gene or a 1:1 ortholog thereof. 7B4 antigen CD144 VE-cadherin vascular endothelial cadherin protein PR:000001444 Category=gene. Requested by=CL. cadherin-5 PR:000001444 A cadherin that is a translation product of the human CDH5 gene or a 1:1 ortholog thereof. PRO:WCB A protein that is a translation product of the human CD5 gene or a 1:1 ortholog thereof. Lyt-1 ly-1 lymphocyte antigen 1 lymphocyte antigen T1/Leu-1 protein PR:000001839 Category=gene. Requested by=CL. T-cell surface glycoprotein CD5 PR:000001839 A protein that is a translation product of the human CD5 gene or a 1:1 ortholog thereof. PRO:WCB A protein that is a translation product of the human IL7R gene or a 1:1 ortholog thereof. IUPHARobj:1698 PIRSF:PIRSF001960 CD127 CDw127 IL-7 receptor subunit alpha IL-7R subunit alpha IL-7R-alpha IL-7RA protein PR:000001869 Category=gene. Requested by=CL. interleukin-7 receptor subunit alpha PR:000001869 A protein that is a translation product of the human IL7R gene or a 1:1 ortholog thereof. PRO:WCB A protein that is a translation product of the human CD14 gene or a 1:1 ortholog thereof. PIRSF:PIRSF002017 monocyte differentiation antigen CD14 myeloid cell-specific leucine-rich glycoprotein protein PR:000001889 Category=gene. Requested by=CL. CD14 molecule PR:000001889 A protein that is a translation product of the human CD14 gene or a 1:1 ortholog thereof. PRO:WCB A protein that is a translation product of the human TFRC gene or a 1:1 ortholog thereof. p90 CD71 T9 TfR TfR1 protein TR PR:000001945 Category=gene. Requested by=CL. transferrin receptor protein 1 PR:000001945 A protein that is a translation product of the human TFRC gene or a 1:1 ortholog thereof. PRO:WCB p90 PRO:DNx A protein with core architecture consisting of a signal sequence, followed by 7 Ig-like domains (Pfam:PF00047, Pfam:PF07679, or Pfam:PF07686), a transmembrane region, and a cytoplasmic Protein tyrosine kinase domain. PIRSF:PIRSF038502 protein PR:000001971 Category=family. vascular endothelial growth factor receptor PR:000001971 A protein with core architecture consisting of a signal sequence, followed by 7 Ig-like domains (Pfam:PF00047, Pfam:PF07679, or Pfam:PF07686), a transmembrane region, and a cytoplasmic Protein tyrosine kinase domain. PRO:WCB A vascular endothelial growth factor receptor that is a translation product of the human KDR gene or a 1:1 ortholog thereof. IUPHARobj:1813 CD309 FLK-1 VEGFR-2 fetal liver kinase 1 kinase NYK kinase insert domain receptor protein-tyrosine kinase receptor flk-1 protein PR:000002112 Category=gene. Requested by=CL. vascular endothelial growth factor receptor 2 PR:000002112 A vascular endothelial growth factor receptor that is a translation product of the human KDR gene or a 1:1 ortholog thereof. PRO:WCB A protein that is the translation product of any of the LY6 genes (LY6A-LY6I). PIRSF:PIRSF002021 protein PR:000002976 Category=family. Ly-6-like protein PR:000002976 A protein that is the translation product of any of the LY6 genes (LY6A-LY6I). PRO:CNA An Ly-6-like protein that is a translation product of the mouse Ly6g gene or a 1:1 ortholog thereof. Ly-6G Ly-6G.1 protein PR:000002978 Category=gene. Requested by=CL. lymphocyte antigen 6G PR:000002978 An Ly-6-like protein that is a translation product of the mouse Ly6g gene or a 1:1 ortholog thereof. PRO:CNA A protein that is a translation product of the Ly76 gene in mouse. ter-119 ter119 protein PR:000002981 Category=organism-gene. Requested by=CL. lymphocyte antigen 76 (mouse) PR:000002981 A protein that is a translation product of the Ly76 gene in mouse. PMID:10848813 PRO:DAN A protein that is a translation product of the human FGF8 gene or a 1:1 ortholog thereof. FGF-8 androgen-induced growth factor protein HBGF-8 heparin-binding growth factor 8 PR:000007499 Category=gene. fibroblast growth factor 8 PR:000007499 A protein that is a translation product of the human FGF8 gene or a 1:1 ortholog thereof. PRO:DNx A protein that is a translation product of the human SHH gene or a 1:1 ortholog thereof. HHG-1 Shh unprocessed N-terminal signaling and C-terminal autoprocessing domains ShhNC protein PR:000014841 Category=gene. sonic hedgehog protein PR:000014841 A protein that is a translation product of the human SHH gene or a 1:1 ortholog thereof. PRO:DNx A protein that is a translation product of the human TAL1 gene or a 1:1 ortholog thereof. T-cell leukemia/lymphoma protein 5 TAL-1 bHLHa17 class A basic helix-loop-helix protein 17 stem cell protein protein PR:000016043 Category=gene. Requested by=CL. T-cell acute lymphocytic leukemia protein 1 PR:000016043 A protein that is a translation product of the human TAL1 gene or a 1:1 ortholog thereof. PRO:DNx 2 An organic amino compound that consists of amino acid residues (unmodified amino-acid residues and/or modified amino-acid residues) linked by peptide bonds or derivatives of such bonds. peptide polypeptide protein PR:000018263 Category=polymer. amino acid chain PR:000018263 An organic amino compound that consists of amino acid residues (unmodified amino-acid residues and/or modified amino-acid residues) linked by peptide bonds or derivatives of such bonds. PRO:DAN PRO:JSG peptide PRO:DAN polypeptide PRO:DAN A protein that is composed of a long N-terminal extracellular domain, a transmembrane domain and a short cytoplasmic C-terminal domain. The N-terminal domain contains beta-propeller repeats (interrupted by an A domain in a subset of integrins alpha), while the C-terminal domain contains a GFFxR motif. protein PR:000025796 Category=family. Integrins are heterodimeric complexes of an alpha and a beta subunit. They are a structurally elaborate family of adhesion molecules that transmit signals bidirectionally across the plasma membrane by undergoing large-scale structural rearrangements. By regulating cell-cell and cell-matrix contacts, integrins participate in a wide-range of biological interactions including development, tissue repair, angiogenesis, inflammation and hemostasis. [PMID:10402956, PMID:11988479, PMID:9676575]. integrin alpha PR:000025796 A protein that is composed of a long N-terminal extracellular domain, a transmembrane domain and a short cytoplasmic C-terminal domain. The N-terminal domain contains beta-propeller repeats (interrupted by an A domain in a subset of integrins alpha), while the C-terminal domain contains a GFFxR motif. PMID:19693543 A protein that is encoded in the genome of Mus musculus. protein PR:000029032 Mus musculus protein PR:000029032 A protein that is encoded in the genome of Mus musculus. PRO:DAN A protein that is encoded in the genome of some Eukaryota. Eukaryota protein protein PR:000036194 eukaryotic protein PR:000036194 A protein that is encoded in the genome of some Eukaryota. PRO:DAN Eukaryota protein PRO:DAN A molecular entity that minimally consists of a protein. protein protein aggregate protein complex protein-containing complex protein PR:000064867 Note: This includes single proteins and derivatives thereof (PR:000000001), protein-containing complexes (GO:0032991), and protein aggregates (PR:000050565). protein-containing molecular entity PR:000064867 A molecular entity that minimally consists of a protein. PRO:DAN protein PRO:DAN protein aggregate PRO:DAN protein complex PRO:DAN protein-containing complex PRO:DAN A T-cell surface glycoprotein CD8 alpha chain that is encoded in the genome of mouse. UniProtKB:P01731 CD8a (mouse) T-cell surface glycoprotein Lyt-2 (mouse) protein PR:P01731 Category=organism-gene. T-cell surface glycoprotein CD8 alpha chain (mouse) PR:P01731 A T-cell surface glycoprotein CD8 alpha chain that is encoded in the genome of mouse. OMA:P01731 PRO:DNx CD8a (mouse) UniProtKB:P01731 T-cell surface glycoprotein Lyt-2 (mouse) UniProtKB:P01731 An integrin alpha-M that is encoded in the genome of mouse. UniProtKB:P05555 CD11 antigen-like family member B (mouse) CD11b (mouse) CR-3 alpha chain (mouse) cell surface glycoprotein MAC-1 subunit alpha (mouse) leukocyte adhesion receptor MO1 (mouse) protein PR:P05555 Category=organism-gene. integrin alpha-M (mouse) PR:P05555 An integrin alpha-M that is encoded in the genome of mouse. PRO:DNx UniProtKB:P05555 CD11 antigen-like family member B (mouse) UniProtKB:P05555 CD11b (mouse) UniProtKB:P05555 CR-3 alpha chain (mouse) UniProtKB:P05555 cell surface glycoprotein MAC-1 subunit alpha (mouse) UniProtKB:P05555 leukocyte adhesion receptor MO1 (mouse) UniProtKB:P05555 A CD4 molecule that is encoded in the genome of mouse. UniProtKB:P06332 CD4 (mouse) T-cell differentiation antigen L3T4 (mouse) T-cell surface antigen T4/Leu-3 (mouse) protein PR:P06332 Category=organism-gene. T-cell surface glycoprotein CD4 (mouse) PR:P06332 A CD4 molecule that is encoded in the genome of mouse. OMA:P06332 PRO:DNx CD4 (mouse) UniProtKB:P06332 T-cell differentiation antigen L3T4 (mouse) UniProtKB:P06332 T-cell surface antigen T4/Leu-3 (mouse) UniProtKB:P06332 A CD2 molecule that is encoded in the genome of mouse. UniProtKB:P08920 CD2 (mouse) LFA-2 (mouse) LFA-3 receptor (mouse) T-cell surface antigen T11/Leu-5 (mouse) lymphocyte antigen 37 (mouse) protein PR:P08920 Category=organism-gene. T-cell surface antigen CD2 (mouse) PR:P08920 A CD2 molecule that is encoded in the genome of mouse. OMA:P08920 PRO:DNx CD2 (mouse) UniProtKB:P08920 LFA-2 (mouse) UniProtKB:P08920 LFA-3 receptor (mouse) UniProtKB:P08920 T-cell surface antigen T11/Leu-5 (mouse) UniProtKB:P08920 lymphocyte antigen 37 (mouse) UniProtKB:P08920 A CD14 molecule that is encoded in the genome of mouse. UniProtKB:P10810 CD14 (mouse) myeloid cell-specific leucine-rich glycoprotein (mouse) protein PR:P10810 Category=organism-gene. monocyte differentiation antigen CD14 (mouse) PR:P10810 A CD14 molecule that is encoded in the genome of mouse. OMA:P10810 PRO:WCB CD14 (mouse) UniProtKB:P10810 myeloid cell-specific leucine-rich glycoprotein (mouse) UniProtKB:P10810 A T-cell surface glycoprotein CD5 that is encoded in the genome of mouse. UniProtKB:P13379 CD5 (mouse) Lyt-1 (mouse) lymphocyte antigen 1 (mouse) protein PR:P13379 Category=organism-gene. T-cell surface glycoprotein CD5 (mouse) PR:P13379 A T-cell surface glycoprotein CD5 that is encoded in the genome of mouse. OMA:P13379 PRO:DNx CD5 (mouse) UniProtKB:P13379 Lyt-1 (mouse) UniProtKB:P13379 lymphocyte antigen 1 (mouse) UniProtKB:P13379 A neural cell adhesion molecule 1 that is encoded in the genome of mouse. UniProtKB:P13595 CD56 (mouse) N-CAM-1 (mouse) NCAM-1 (mouse) protein PR:P13595 Category=organism-gene. neural cell adhesion molecule 1 (mouse) PR:P13595 A neural cell adhesion molecule 1 that is encoded in the genome of mouse. OMA:P13595 PRO:DNx CD56 (mouse) UniProtKB:P13595 N-CAM-1 (mouse) UniProtKB:P13595 NCAM-1 (mouse) UniProtKB:P13595 An interleukin-7 receptor subunit alpha that is encoded in the genome of mouse. UniProtKB:P16872 CD127 (mouse) IL-7 receptor subunit alpha (mouse) IL-7R subunit alpha (mouse) IL-7R-alpha (mouse) IL-7RA (mouse) protein PR:P16872 Category=organism-gene. interleukin-7 receptor subunit alpha (mouse) PR:P16872 An interleukin-7 receptor subunit alpha that is encoded in the genome of mouse. OMA:P16872 PRO:DNx CD127 (mouse) UniProtKB:P16872 IL-7 receptor subunit alpha (mouse) UniProtKB:P16872 IL-7R subunit alpha (mouse) UniProtKB:P16872 IL-7R-alpha (mouse) UniProtKB:P16872 IL-7RA (mouse) UniProtKB:P16872 A membrane-spanning 4-domains subfamily A member 1 that is encoded in the genome of mouse. UniProtKB:P19437 B-cell differentiation antigen Ly-44 (mouse) CD20 (mouse) lymphocyte antigen 44 (mouse) membrane-spanning 4-domains subfamily A member 1 (mouse) protein PR:P19437 Category=organism-gene. B-lymphocyte antigen CD20 (mouse) PR:P19437 A membrane-spanning 4-domains subfamily A member 1 that is encoded in the genome of mouse. OMA:P19437 PRO:DNx B-cell differentiation antigen Ly-44 (mouse) UniProtKB:P19437 CD20 (mouse) UniProtKB:P19437 lymphocyte antigen 44 (mouse) UniProtKB:P19437 membrane-spanning 4-domains subfamily A member 1 (mouse) UniProtKB:P19437 A T-cell acute lymphocytic leukemia protein 1 that is encoded in the genome of mouse. UniProtKB:P22091 Stem cell protein (mouse) TAL-1 (mouse) protein PR:P22091 Category=organism-gene. T-cell acute lymphocytic leukemia protein 1 homolog (mouse) PR:P22091 A T-cell acute lymphocytic leukemia protein 1 that is encoded in the genome of mouse. OMA:P22091 PRO:DNx Stem cell protein (mouse) UniProtKB:P22091 TAL-1 (mouse) UniProtKB:P22091 A CD3 epsilon that is encoded in the genome of mouse. UniProtKB:P22646 CD3e (mouse) T-cell surface antigen T3/Leu-4 epsilon chain (mouse) protein PR:P22646 Category=organism-gene. T-cell surface glycoprotein CD3 epsilon chain (mouse) PR:P22646 A CD3 epsilon that is encoded in the genome of mouse. OMA:P22646 PRO:DNx CD3e (mouse) UniProtKB:P22646 T-cell surface antigen T3/Leu-4 epsilon chain (mouse) UniProtKB:P22646 A CD19 molecule that is encoded in the genome of mouse. UniProtKB:P25918 CD19 (mouse) differentiation antigen CD19 (mouse) protein PR:P25918 Category=organism-gene. B-lymphocyte antigen CD19 (mouse) PR:P25918 A CD19 molecule that is encoded in the genome of mouse. OMA:P25918 PRO:DNx CD19 (mouse) UniProtKB:P25918 differentiation antigen CD19 (mouse) UniProtKB:P25918 A lymphocyte antigen 6G that is encoded in the genome of mouse. UniProtKB:P35461 Ly-6G (mouse) Ly-6G.1 (mouse) protein PR:P35461 Category=organism-gene. lymphocyte antigen 6G (mouse) PR:P35461 A lymphocyte antigen 6G that is encoded in the genome of mouse. PRO:CNA UniProtKB:P35461 Ly-6G (mouse) UniProtKB:P35461 Ly-6G.1 (mouse) UniProtKB:P35461 A vascular endothelial growth factor receptor 2 that is encoded in the genome of mouse. UniProtKB:P35918 CD309 (mouse) FLK-1 (mouse) VEGFR-2 (mouse) fetal liver kinase 1 (mouse) kinase NYK (mouse) protein-tyrosine kinase receptor flk-1 (mouse) protein PR:P35918 Category=organism-gene. vascular endothelial growth factor receptor 2 (mouse) PR:P35918 A vascular endothelial growth factor receptor 2 that is encoded in the genome of mouse. OMA:P35918 PRO:DNx CD309 (mouse) UniProtKB:P35918 FLK-1 (mouse) UniProtKB:P35918 VEGFR-2 (mouse) UniProtKB:P35918 fetal liver kinase 1 (mouse) UniProtKB:P35918 kinase NYK (mouse) UniProtKB:P35918 protein-tyrosine kinase receptor flk-1 (mouse) UniProtKB:P35918 A fibroblast growth factor 8 that is encoded in the genome of mouse. UniProtKB:P37237 AIGF (mouse) FGF-8 (mouse) androgen-induced growth factor (mouse) protein HBGF-8 (mouse) heparin-binding growth factor 8 (mouse) PR:P37237 Category=organism-gene. fibroblast growth factor 8 (mouse) PR:P37237 A fibroblast growth factor 8 that is encoded in the genome of mouse. OMA:P37237 PRO:DNx AIGF (mouse) UniProtKB:P37237 FGF-8 (mouse) UniProtKB:P37237 androgen-induced growth factor (mouse) UniProtKB:P37237 HBGF-8 (mouse) UniProtKB:P37237 heparin-binding growth factor 8 (mouse) UniProtKB:P37237 A cadherin-5 that is encoded in the genome of mouse. UniProtKB:P55284 CD144 (mouse) VE-cadherin (mouse) vascular endothelial cadherin (mouse) protein PR:P55284 Category=organism-gene. cadherin-5 (mouse) PR:P55284 A cadherin-5 that is encoded in the genome of mouse. OMA:P55284 PRO:DNx CD144 (mouse) UniProtKB:P55284 VE-cadherin (mouse) UniProtKB:P55284 vascular endothelial cadherin (mouse) UniProtKB:P55284 A sonic hedgehog protein that is encoded in the genome of mouse. UniProtKB:Q62226 HHG-1 (mouse) SHH (mouse) Shh unprocessed N-terminal signaling and C-terminal autoprocessing domains (mouse) ShhNC (mouse) protein PR:Q62226 Category=organism-gene. sonic hedgehog protein (mouse) PR:Q62226 A sonic hedgehog protein that is encoded in the genome of mouse. OMA:Q62226 PRO:DNx HHG-1 (mouse) UniProtKB:Q62226 SHH (mouse) UniProtKB:Q62226 Shh unprocessed N-terminal signaling and C-terminal autoprocessing domains (mouse) UniProtKB:Q62226 ShhNC (mouse) UniProtKB:Q62226 A transferrin receptor protein 1 that is encoded in the genome of mouse. UniProtKB:Q62351 CD71 (mouse) TfR (mouse) TfR1 (mouse) protein TR (mouse) PR:Q62351 Category=organism-gene. transferrin receptor protein 1 (mouse) PR:Q62351 A transferrin receptor protein 1 that is encoded in the genome of mouse. OMA:Q62351 PRO:DNx CD71 (mouse) UniProtKB:Q62351 TfR (mouse) UniProtKB:Q62351 TfR1 (mouse) UniProtKB:Q62351 TR (mouse) UniProtKB:Q62351 A CD34 molecule that is encoded in the genome of mouse. UniProtKB:Q64314 CD34 (mouse) protein PR:Q64314 Category=organism-gene. hematopoietic progenitor cell antigen CD34 (mouse) PR:Q64314 A CD34 molecule that is encoded in the genome of mouse. OMA:Q64314 PRO:DNx CD34 (mouse) UniProtKB:Q64314 RO:0002577 A material entity consisting of multiple components that are causally integrated. system SO:0000704 An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity. BFO:0000003 uberon UBERON:0000000 processual entity UBERON:0000000 An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity. span:ProcessualEntity chemosensory sensory organ uberon UBERON:0000005 chemosensory organ UBERON:0000005 chemosensory sensory organ FBbt:00005157 A layer of dense irregular connective tissue that lines organs and supports the mucosa, as well as joins the mucosa to the bulk of underlying smooth muscle. [WP,unvetted]. BTO:0002107 FMA:85391 FMA:85392 NCIT:C13167 SCTID:68439008 Wikipedia:Submucosa organ submucosa region of submucosa submucosa of organ submucosa of region of organ uberon submucous layer tela submucosa tunica submucosa UBERON:0000009 submucosa UBERON:0000009 A layer of dense irregular connective tissue that lines organs and supports the mucosa, as well as joins the mucosa to the bulk of underlying smooth muscle. [WP,unvetted]. Wikipedia:Submucosa organ submucosa FMA:85391 region of submucosa FMA:85392 submucosa of organ FMA:85391 submucosa of region of organ FMA:85392 submucous layer BTO:0002107 tela submucosa BTO:0002107 A major division of the nervous system that contains nerves which connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands. AAO:0000429 BAMS:PNS BILA:0000081 BIRNLEX:1111 BTO:0001028 CALOHA:TS-0808 EFO:0000891 EHDAA2:0001445 EHDAA:2893 EMAPA:16665 EV:0100335 FMA:9903 GAID:715 MA:0000218 MAT:0000338 MESH:D017933 MIAA:0000338 NCIT:C12465 SCTID:362292005 TAO:0000142 VHOG:0000399 Wikipedia:Peripheral_nervous_system XAO:0000178 ZFA:0000142 neuronames:3232 uberon UBERON:0000010 peripheral nervous system UBERON:0000010 A major division of the nervous system that contains nerves which connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands. GO:0007422 The parasympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia[GO]. AAO:0010488 BIRNLEX:2517 BTO:0001833 CALOHA:TS-2094 EFO:0000894 EHDA:10096 EHDAA2:0001402 EHDAA:4655 EMAPA:17270 FMA:9907 GAID:708 MA:0000223 MAT:0000101 MESH:D010275 MIAA:0000101 NCIT:C12764 SCTID:362496006 TAO:0001575 VHOG:0000755 Wikipedia:Parasympathetic_nervous_system ZFA:0001575 PNS - parasympathetic parasympathetic part of autonomic division of nervous system uberon UBERON:0000011 parasympathetic nervous system UBERON:0000011 The parasympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia[GO]. GO:0048486 Part of peripheral nervous system that includes the somatic parts of the cranial and spinal nerves and their ganglia and the peripheral sensory receptors. EFO:0000892 FMA:9904 MA:0002850 MAT:0000099 MIAA:0000099 NLXANAT:100301 Wikipedia:Somatic_nervous_system PNS - somatic somatic nervous system, somatic division somatic part of peripheral nervous system somatic peripheral nervous system uberon UBERON:0000012 somatic nervous system UBERON:0000012 Part of peripheral nervous system that includes the somatic parts of the cranial and spinal nerves and their ganglia and the peripheral sensory receptors. NLXANAT:100301 somatic nervous system, somatic division NLXANAT:100301 somatic part of peripheral nervous system UBERON:cjm somatic peripheral nervous system NLXANAT:100301 The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter [GO]. AAO:0010487 BIRNLEX:2516 BTO:0001832 CALOHA:TS-2050 EFO:0000893 EHDAA2:0001971 EHDAA:3769 EMAPA:16985 FMA:9906 GAID:710 MA:0000225 MESH:D013564 MIAA:0000100 NCIT:C12795 SCTID:362484004 TAO:0001576 VHOG:0000384 Wikipedia:Sympathetic_nervous_system ZFA:0001576 sympathetic nervous system sympathetic part of autonomic division of nervous system uberon UBERON:0000013 sympathetic nervous system UBERON:0000013 The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter [GO]. GO:0048485 Any portion of the organ that covers that body and consists of a layer of epidermis and a layer of dermis. EHDAA:6530 EV:0100152 FMA:86166 GAID:933 MA:0000151 MAT:0000284 MESH:D012867 MIAA:0000284 SCTID:20795001 VHOG:0000860 Wikipedia:Skin portion of skin region of skin skin skin region skin zone uberon UBERON:0000014 zone of skin UBERON:0000014 Any portion of the organ that covers that body and consists of a layer of epidermis and a layer of dermis. Wikipedia:Skin http://orcid.org/0000-0002-6601-2165 skin MA:0000151 A non-material anatomical entity of two dimensions. Anatomical boundaries are contiguous structures. AEO:0000192 CARO:0000010 FMA:50705 anatomical boundary uberon UBERON:0000015 Except in the case of abstracted fiat boundaries such as the midline plane of an organism, all 2D anatomical entities have a 3 dimensional projection. For example, the surface of the shell of a muscle has a distinct shape that projects into the third dimension. Note that boundaries are 2D structures. They have no thickness - and so can not be sites of gene expression or gene product localisation. For this, use boundary region terms. non-material anatomical boundary UBERON:0000015 A non-material anatomical entity of two dimensions. Anatomical boundaries are contiguous structures. CARO:0000010 anatomical boundary CARO:0000010 A light sensing organ composed of ommatidia. BTO:0001921 HAO:0000217 TGMA:0000024 Wikipedia:Compound_eye uberon Facettenauge Komplexauge adult compound eye faceted eye insect eye zusammengesetztes Auge UBERON:0000018 compound eye UBERON:0000018 A light sensing organ composed of ommatidia. FB:gg Wikipedia:Compound_eye Facettenauge BTO:0001921 Komplexauge BTO:0001921 zusammengesetztes Auge BTO:0001921 An organ of sight that includes the camera-type eyeball and supporting structures such as the lacrimal apparatus, the conjunctiva, the eyelid. eye AAO:0010340 BIRNLEX:1169 BTO:0004688 EHDAA2:0000484 EHDAA:936 EMAPA:16198 FMA:54448 MA:0000261 NCIT:C12401 SCTID:181143004 TAO:0000107 VHOG:0000275 XAO:0000179 ZFA:0000107 vertebrate eye uberon camera-type eye plus associated structures orbital part of face orbital region UBERON:0000019 camera-type eye UBERON:0000019 An organ of sight that includes the camera-type eyeball and supporting structures such as the lacrimal apparatus, the conjunctiva, the eyelid. GO:0043010 https://orcid.org/0000-0002-6601-2165 eye FMA:54448 orbital part of face FMA:54448 orbital region FMA:54448 An organ that is capable of transducing sensory stimulus to the nervous system. AEO:0000094 BSA:0000121 BTO:0000202 CALOHA:TS-2043 EHDAA2:0001824 EHDAA:500 EMAPA:35955 GAID:63 HAO:0000930 MA:0000017 MESH:D012679 NCIT:C33224 SCTID:244485009 VHOG:0001407 WBbt:0006929 organ of sense organ system organ of sensory organ system organ of sensory system sense organ system organ sensory organ sensory organ system organ sensory system organ sensillum uberon Sinnesorgan sensor UBERON:0000020 sense organ UBERON:0000020 An organ that is capable of transducing sensory stimulus to the nervous system. https://github.com/obophenotype/uberon/issues/549 https://orcid.org/0000-0002-6601-2165 organ of sense organ system OBOL:accepted organ of sensory organ system OBOL:accepted organ of sensory system OBOL:accepted sense organ system organ OBOL:automatic sensory organ system organ OBOL:automatic sensory system organ OBOL:accepted sensillum WBbt:0006929 Sinnesorgan BTO:0000202 Appendage that is shaped in order to produce lift for flight through the air. BTO:0001463 EFO:0000885 GAID:1217 MAT:0000202 MESH:D014921 MIAA:0000202 Wikipedia:Wing aliform appendage uberon UBERON:0000023 wing UBERON:0000023 Appendage that is shaped in order to produce lift for flight through the air. http://orcid.org/0000-0002-6601-2165 aliform appendage http://orcid.org/0000-0002-6601-2165 Any hollow cylindrical anatomical structure containing a lumen through which substances are transported. galen:Tube anatomical tube duct uberon UBERON:0000025 tube UBERON:0000025 Any hollow cylindrical anatomical structure containing a lumen through which substances are transported. http://orcid.org/0000-0002-6601-2165 Major subdivision of an organism that protrudes from the body[DOS, CARO]. AEO:0000193 BILA:0000018 BTO:0001492 CARO:0010003 EFO:0000799 EHDAA2:0003193 EV:0100155 HAO:0000144 MAT:0000023 MESH:D005121 MIAA:0000023 NCIT:C61460 VSAO:0000075 Wikipedia:Appendage XAO:0000218 uberon extremitaet extremity limbs/digits/tail UBERON:0000026 appendage UBERON:0000026 Major subdivision of an organism that protrudes from the body[DOS, CARO]. CARO:DOS extremitaet BTO:0001492 limbs/digits/tail MP:0000001 A thin layer of loose connective tissue which lies beneath the epithelium and together with the epithelium constitutes the mucosa[WP]. The lamina propria contains capillaries and a central lacteal (lymph vessel) in the small intestine, as well as lymphoid tissue. Lamina propria also contains glands with the ducts opening on to the mucosal epithelium, that secrete mucus and serous secretions. BTO:0002330 FMA:62517 NCIT:C32918 SCTID:298225002 Wikipedia:Lamina_propria lamina propria mucosa lamina propria mucosae uberon tunica propria UBERON:0000030 lamina propria UBERON:0000030 A thin layer of loose connective tissue which lies beneath the epithelium and together with the epithelium constitutes the mucosa[WP]. The lamina propria contains capillaries and a central lacteal (lymph vessel) in the small intestine, as well as lymphoid tissue. Lamina propria also contains glands with the ducts opening on to the mucosal epithelium, that secrete mucus and serous secretions. Wikipedia:Lamina_propria tunica propria BTO:0002330 A lamina propria that is part of a respiratory airway. EMAPA:35877 FMA:265157 MA:0001858 NCIT:C49305 lamina propria mucosa of trachea lamina propria mucosa of windpipe lamina propria mucosae of trachea lamina propria mucosae of windpipe lamina propria of windpipe trachea lamina propria trachea lamina propria mucosa trachea lamina propria mucosae tracheal lamina propria windpipe lamina propria windpipe lamina propria mucosa windpipe lamina propria mucosae uberon UBERON:0000031 lamina propria of trachea UBERON:0000031 A lamina propria that is part of a respiratory airway. OBOL:automatic lamina propria mucosa of trachea OBOL:automatic lamina propria mucosa of windpipe OBOL:automatic lamina propria mucosae of trachea OBOL:automatic lamina propria mucosae of windpipe OBOL:automatic lamina propria of windpipe OBOL:automatic trachea lamina propria mucosa OBOL:automatic trachea lamina propria mucosae OBOL:automatic windpipe lamina propria OBOL:automatic windpipe lamina propria mucosa OBOL:automatic windpipe lamina propria mucosae OBOL:automatic The head is the anterior-most division of the body [GO]. AAO:0010335 AEO:0000106 BILA:0000115 BIRNLEX:1230 BTO:0000282 CALOHA:TS-0436 EFO:0000964 EHDAA2:0003106 EMAPA:31858 FMA:7154 GAID:61 HAO:0000397 MA:0000023 MAT:0000294 MESH:D006257 MIAA:0000294 NCIT:C12419 SCTID:302548004 SPD:0000016 TAO:0001114 TGMA:0000002 VHOG:0001644 WBbt:0005739 Wikipedia:Head XAO:0003024 galen:Head head (volume) adult head uberon cephalic area UBERON:0000033 head UBERON:0000033 The head is the anterior-most division of the body [GO]. GO:0060322 Wikipedia:Head head (volume) FMA:7154 cephalic area SPD:0000016 Multi-tissue structure that is comprised of a secretory epithelial layer (mesothelium) and a connective tissue layer. FMA:9581 GAID:19 MESH:D012704 NCIT:C13169 SCTID:362878009 TAO:0005425 Wikipedia:Serous_membrane ZFA:0005425 wall of serous sac uberon serosa UBERON:0000042 serous membrane UBERON:0000042 Multi-tissue structure that is comprised of a secretory epithelial layer (mesothelium) and a connective tissue layer. Wikipedia:Serous_membrane https://github.com/obophenotype/uberon/issues/86 wall of serous sac FMA:9581 serosa Wikipedia:Serous_membrane Dense regular connective tissue that connects muscle to bone[VSAO]. AEO:0000091 BTO:0001356 CALOHA:TS-1021 EHDAA2:0003091 EMAPA:35854 EV:0100149 FMA:9721 GAID:276 MA:0000115 MESH:D013710 NCIT:C13045 SCTID:256667004 VHOG:0001286 VSAO:0000073 Wikipedia:Tendon XAO:0000173 ZFA:0005647 galen:Tendon uberon sinew UBERON:0000043 tendon UBERON:0000043 Dense regular connective tissue that connects muscle to bone[VSAO]. GO_REF:0000034 VSAO:0000073 Wikipedia:Tendon http://dx.plos.org/10.1371/journal.pone.0051070 sinew Wikipedia:Tendon A biological tissue mass, most commonly a mass of nerve cell bodies. AAO:0010426 AEO:0000135 BAMS:G BTO:0000497 CALOHA:TS-0397 EFO:0000899 EHDAA2:0003135 EHDAA:2897 EHDAA:4662 EHDAA:5621 EHDAA:918 EMAPA:32846 EV:0100372 FMA:5884 MA:0002406 MAT:0000207 MAT:0000343 MESH:D005724 MIAA:0000207 MIAA:0000343 NCIT:C12719 NLXANAT:100302 TAO:0000190 TGMA:0001016 VHOG:0000156 WBbt:0005189 Wikipedia:Ganglion XAO:0000209 ZFA:0000190 uberon ganglia neural ganglion UBERON:0000045 ganglion UBERON:0000045 A biological tissue mass, most commonly a mass of nerve cell bodies. Wikipedia:Ganglion https://github.com/obophenotype/uberon/issues/300 neural ganglion BTO:0000497 An eye with one concave chamber. Note that 'simple' does not imply a reduced level of complexity or acuity. TGMA:0000729 Wikipedia:Eye#Simple_eyes uberon UBERON:0000047 simple eye UBERON:0000047 An eye with one concave chamber. Note that 'simple' does not imply a reduced level of complexity or acuity. Wikipedia:Eye#Simple_eyes A tubular structure that contains, conveys body fluid, such as blood or lymph. uberon UBERON:0000055 vessel UBERON:0000055 A tubular structure that contains, conveys body fluid, such as blood or lymph. https://orcid.org/0000-0002-6601-2165 A tubular structure that transports secreted or excreted substances. AAO:0011123 FMA:30320 NCIT:C12948 SCTID:91726008 TAO:0005171 Wikipedia:Duct_(anatomy) XAO:0004000 ZFA:0005171 galen:Duct anatomical duct exocrine duct exocrine gland duct uberon UBERON:0000058 duct UBERON:0000058 A tubular structure that transports secreted or excreted substances. http://orcid.org/0000-0002-6601-2165 http://www.siumed.edu/~dking2/intro/glands.htm#ducts Organ component adjacent to an organ cavity and which consists of a maximal aggregate of organ component layers. UBERON:0009915 wall FMA:82482 galen:Wall wall of organ uberon organ wall UBERON:0000060 anatomical wall UBERON:0000060 Organ component adjacent to an organ cavity and which consists of a maximal aggregate of organ component layers. FMA:82482 wall of organ FMA:82482 organ wall FMA:82482 Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome. AAO:0010825 AEO:0000003 BILA:0000003 CARO:0000003 EHDAA2:0003003 EMAPA:0 FMA:305751 FMA:67135 GAID:781 HAO:0000003 MA:0003000 MESH:D000825 SCTID:362889002 TAO:0000037 TGMA:0001823 VHOG:0001759 XAO:0003000 ZFA:0000037 http://dbpedia.org/ontology/AnatomicalStructure biological structure connected biological structure uberon UBERON:0000061 anatomical structure UBERON:0000061 Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome. CARO:0000003 connected biological structure CARO:0000003 Anatomical structure that performs a specific function or group of functions [WP]. BIRNLEX:4 CARO:0020004 EFO:0000634 EMAPA:35949 ENVO:01000162 FMA:67498 MA:0003001 NCIT:C13018 SCTID:272625005 WBbt:0003760 Wikipedia:Organ_(anatomy) uberon anatomical unit body organ element UBERON:0000062 organ UBERON:0000062 Anatomical structure that performs a specific function or group of functions [WP]. Wikipedia:Organ_(anatomy) element http://orcid.org/0000-0002-6601-2165 A part of an organ that constitutes a distinct modular sub-unit. In some cases, the organ may also contain other sub-units of identical or similar types, in other cases this may be a distinct entity. FMA:86140 uberon organ region with fixed fiat boundary organ segment segment of organ UBERON:0000063 organ subunit UBERON:0000063 A part of an organ that constitutes a distinct modular sub-unit. In some cases, the organ may also contain other sub-units of identical or similar types, in other cases this may be a distinct entity. http://orcid.org/0000-0002-6601-2165 organ region with fixed fiat boundary FMA:86140 organ segment FMA:86140 segment of organ FMA:86140 A multicellular structure that is a part of an organ. AAO:0011124 BIRNLEX:16 EFO:0000635 FMA:82472 SCTID:113343008 SCTID:91717005 cardinal organ part uberon regional part of organ UBERON:0000064 organ part UBERON:0000064 A multicellular structure that is a part of an organ. http://orcid.org/0000-0002-6601-2165 cardinal organ part FMA:82472 regional part of organ BIRNLEX:16 Anatomical structure that is part of the respiratory system. In mammals consists of upper and lower tracts. EHDAA2:0001606 EHDAA:1568 EHDAA:2219 EMAPA:16737 FMA:265130 SCTID:361110005 VHOG:0000393 uberon UBERON:0000065 respiratory tract UBERON:0000065 Anatomical structure that is part of the respiratory system. In mammals consists of upper and lower tracts. https://orcid.org/0000-0002-6601-2165 The stage of development at which the animal is fully formed, including immaturity and maturity. Includes both sexually immature stage, and adult stage. adult stage BTO:0001043 BilaDO:0000004 EFO:0001272 FBdv:00005369 WBls:0000041 XtroDO:0000084 fully formed animal stage juvenile-adult stage uberon UBERON:0000066 fully formed stage UBERON:0000066 The stage of development at which the animal is fully formed, including immaturity and maturity. Includes both sexually immature stage, and adult stage. https://orcid.org/0000-0002-6601-2165 A life cycle stage that starts with fertilization and ends with the fully formed embryo. BilaDO:0000002 EV:0300001 FBdv:00005289 FMA:72652 OGES:000000 OGES:000022 SCTID:296280003 WBls:0000003 WBls:0000092 WBls:0000102 XAO:1000012 embryonic stage uberon embryogenesis UBERON:0000068 embryo stage UBERON:0000068 A life cycle stage that starts with fertilization and ends with the fully formed embryo. http://orcid.org/0000-0002-6601-2165 End of the life of an organism. XAO:0000437 XtroDO:0000085 uberon death UBERON:0000071 death stage UBERON:0000071 End of the life of an organism. XAO:0000437 An section of a respiratory tract. FMA:45660 MA:0000434 uberon respiratory tract subdivision of respiratory tract UBERON:0000072 proximo-distal subdivision of respiratory tract UBERON:0000072 An section of a respiratory tract. http://orcid.org/0000-0002-6601-2165 respiratory tract MA:0000434 Any part or collection of parts of the central or peripheral nervous system. Parts may span both CNS and PNS. 2009-06-18T09:00:04Z BIRNLEX:1157 NCIT:C13040 SCTID:25087005 part of nervous system uberon UBERON:0000073 regional part of nervous system UBERON:0000073 Any part or collection of parts of the central or peripheral nervous system. Parts may span both CNS and PNS. BIRNLEX:1157 part of nervous system BIRNLEX:1157 Anatomical cluster consisting of the skeletal elements and articular elements that are part of an individual subdivision of the organism. UBERON:0010322 FMA:85544 NCIT:C34076 SCTID:118966000 galen:ComplexSkeletalStructure skeletal system subdivision uberon skeletal system part UBERON:0000075 subdivision of skeletal system UBERON:0000075 Anatomical cluster consisting of the skeletal elements and articular elements that are part of an individual subdivision of the organism. UBERONREF:0000003 https://orcid.org/0000-0002-6601-2165 skeletal system subdivision FMA:85544 The surface (external) layer of ectoderm which begins to proliferate shortly after separation from the neuroectoderm. EHDAA2:0001968 EHDAA:1494 EHDAA:350 EHDAA:4784 EHDAA:4790 EHDAA:4796 EHDAA:7860 EMAPA:16096 FMA:87656 NCIT:C34309 Wikipedia:External_ectoderm surface (external) ectoderm surface ectoderm uberon UBERON:0000076 external ectoderm UBERON:0000076 The surface (external) layer of ectoderm which begins to proliferate shortly after separation from the neuroectoderm. MGI:anna MP:0012532 surface ectoderm MP:0012532 An anatomical structure that develops from the endoderm and the mesoderm. uberon UBERON:0000077 mixed endoderm/mesoderm-derived structure UBERON:0000077 An anatomical structure that develops from the endoderm and the mesoderm. https://orcid.org/0000-0002-6601-2165 An anatomical structure that develops from the ectoderm, mesoderm and endoderm. uberon UBERON:0000078 mixed ectoderm/mesoderm/endoderm-derived structure UBERON:0000078 An anatomical structure that develops from the ectoderm, mesoderm and endoderm. https://orcid.org/0000-0002-6601-2165 A spherical embryonic mass of blastomeres formed before the blastula and resulting from cleavage of the fertilized ovum. BTO:0001508 EHDAA2:0000005 FMA:292334 GAID:1295 MESH:D009028 NCIT:C34212 SCTID:361474003 Wikipedia:Morula uberon morula (2-16 cells) UBERON:0000085 morula UBERON:0000085 A spherical embryonic mass of blastomeres formed before the blastula and resulting from cleavage of the fertilized ovum. MP:0012130 morula (2-16 cells) EHDAA2:0000005 A glycoprotein membrane surrounding the plasma membrane of an oocyte. It is a vital constitutive part of the latter, external but not extraneous to it. The zona pellucida first appears in multilaminar primary oocytes. zona pellucida - vitelline membrane BTO:0003135 EHDAA2:0002220 EHDAA:31 EHDAA:62 EMAPA:16035 FMA:18674 GAID:410 MA:0001715 MESH:D015044 NCIT:C33896 TAO:0001111 Wikipedia:Zona_pellucida ZFA:0001111 uberon oolemma pellucid zone striated membrane vitelline envelope vitelline membrane zona radiata zona striata UBERON:0000086 zona pellucida UBERON:0000086 A glycoprotein membrane surrounding the plasma membrane of an oocyte. It is a vital constitutive part of the latter, external but not extraneous to it. The zona pellucida first appears in multilaminar primary oocytes. Wikipedia:Zona_pellucida zona pellucida - vitelline membrane VHOG:0000720 oolemma BTO:0003135 pellucid zone BTO:0003135 striated membrane BTO:0003135 zona radiata BTO:0003135 zona striata BTO:0003135 A mass of cells that develop into the body of the embryo and some extraembryonic tissues. EFO:0000547 EHDAA2:0000830 EHDAA:40 EMAPA:16041 FMA:86557 NCIT:C13740 SCTID:361456007 VHOG:0000742 Wikipedia:Inner_cell_mass uberon ICM early embryoblast embryoblast pluriblast UBERON:0000087 inner cell mass UBERON:0000087 A mass of cells that develop into the body of the embryo and some extraembryonic tissues. ISBN:0-683-40008-8 MGI:pvb ICM VHOG:0000742 early embryoblast FMA:86557 The mesectodermal cell layer arising from the trophectoderm that erodes the uterine mucosa and contributes to the formation of the placenta. BTO:0001079 CALOHA:TS-1070 EV:0100120 FMA:83029 GAID:1152 MESH:D014327 NCIT:C93292 SCTID:362839005 Wikipedia:Trophoblast trophoblast layer uberon trophoderm UBERON:0000088 Aggregate of cells forming the outer layer of a blastocyst, which provide nutrients to the embryo and develop into a large part of the placenta. They are formed during the first stage of pregnancy and are the first cells to differentiate from the fertilized egg. [Wikipedia:Trophoblast] trophoblast UBERON:0000088 The mesectodermal cell layer arising from the trophectoderm that erodes the uterine mucosa and contributes to the formation of the placenta. ISBN:0-683-40008-8 MP:0005031 trophoblast layer MP:0005031 trophoderm BTO:0001079 A flattened, almost circular bilaminar plate of cells formed when the inner cell mass (aka embryoblast) forms two epithelial layers, each of a distinct lineage, separated by an extracellular basement membrane: the external (dorsal) layer is called the epiblast and the internal (ventral) layer is called the hypoblast (aka primitive endoderm); together, they compose the bilaminar embryonic disc. embryonic disc embryonic shield germinal disc germinal disk FMA:293863 NCIT:C34112 Wikipedia:Bilaminar_disc bilaminary embryonic disc bilaminary germ disc uberon bilaminar disk UBERON:0000091 bilaminar disc UBERON:0000091 A flattened, almost circular bilaminar plate of cells formed when the inner cell mass (aka embryoblast) forms two epithelial layers, each of a distinct lineage, separated by an extracellular basement membrane: the external (dorsal) layer is called the epiblast and the internal (ventral) layer is called the hypoblast (aka primitive endoderm); together, they compose the bilaminar embryonic disc. MP:0003886 embryonic disc MP:0003886 embryonic shield MP:0003886 germinal disc MP:0003886 germinal disk MP:0003886 bilaminary germ disc ISBN:9780878932504 bilaminar disk Wikipedia:Bilaminar_disc Stage succeeding embryo, including mature structure. BilaDO:0000003 OGES:000010 OGES:000014 OGES:000024 WBls:0000022 WBls:0000093 WBls:0000103 postembryonic stage post-hatching stage uberon postembryonic UBERON:0000092 post-embryonic stage UBERON:0000092 Stage succeeding embryo, including mature structure. https://orcid.org/0000-0002-6601-2165 Nonparenchymatous organ that primarily consists of dense connective tissue organized into a sheet which interconnects two or more organs, separates two or more body spaces from one another, or surrounds an organ or body part. Examples: interosseous membrane of forearm, obturator membrane, tympanic membrane, fibrous pericardium, fascia lata, dura mater. [FMA]. 2009-07-30T05:19:13Z membrane FMA:7145 membrane of organ uberon UBERON:0000094 membrane organ UBERON:0000094 Nonparenchymatous organ that primarily consists of dense connective tissue organized into a sheet which interconnects two or more organs, separates two or more body spaces from one another, or surrounds an organ or body part. Examples: interosseous membrane of forearm, obturator membrane, tympanic membrane, fibrous pericardium, fascia lata, dura mater. [FMA]. FMA:7145 Portion of neural crest that develops from the dorsal neural tube. It overlaps the vagal neural crest and migrates to populate the pharyngeal arches 3, 4 and 6 (producing structures in the head) and to the heart, forming connective tissue that separates the great vessels of the heart. [Wikipedia]. 2009-07-30T07:57:38Z TAO:0002173 Wikipedia:Cardiac_neural_crest XAO:0004190 ZFA:0001648 uberon cardiac neural crest complex complexus cristae neuralis cardiacus UBERON:0000095 cardiac neural crest UBERON:0000095 Portion of neural crest that develops from the dorsal neural tube. It overlaps the vagal neural crest and migrates to populate the pharyngeal arches 3, 4 and 6 (producing structures in the head) and to the heart, forming connective tissue that separates the great vessels of the heart. [Wikipedia]. Wikipedia:Cardiac_neural_crest cardiac neural crest complex Wikipedia:Cardiac_neural_crest complexus cristae neuralis cardiacus Wikipedia:Cardiac_neural_crest The lung vasculature is composed of the tubule structures that carry blood or lymph in the lungs[GO]. FMA:73750 lung vascular network pulmonary vasculature vascular network of lung vasculature of lung uberon UBERON:0000102 lung vasculature UBERON:0000102 The lung vasculature is composed of the tubule structures that carry blood or lymph in the lungs[GO]. GOC:GO lung vascular network OBOL:automatic pulmonary vasculature FMA:73750 vascular network of lung OBOL:automatic vasculature of lung OBOL:automatic An entire span of an organism's life. In metazoans, commences with the zygote stage and ends with the death of the organism. FBdv:00000000 OGES:000011 ncithesaurus:Life entire life cycle entire lifespan life lifespan uberon UBERON:0000104 life cycle UBERON:0000104 An entire span of an organism's life. In metazoans, commences with the zygote stage and ends with the death of the organism. https://orcid.org/0000-0002-6601-2165 A spatiotemporal region encompassing some part of the life cycle of an organism. BILS:0000105 EFO:0000399 FBdv:00007012 FMA:24120 MESH:D008018 PdumDv:0000090 WBls:0000002 XAO:1000000 ZFS:0000000 ZFS:0100000 ncithesaurus:Developmental_Stage developmental stage stage uberon UBERON:0000105 life cycle stage UBERON:0000105 A spatiotemporal region encompassing some part of the life cycle of an organism. https://orcid.org/0000-0002-6601-2165 A stage at which the organism is a single cell produced by means of sexual reproduction. BILS:0000106 BilaDO:0000005 EFO:0001322 EHDAA:27 FBdv:00005288 NCIT:C12601 PdumDv:0000100 VHOG:0000745 Wikipedia:Zygote XAO:1000001 ZFS:0000001 1-cell stage fertilized egg stage one cell stage uberon fertilized egg stage one-cell stage zygote UBERON:0000106 zygote stage UBERON:0000106 A stage at which the organism is a single cell produced by means of sexual reproduction. Wikipedia:Zygote fertilized egg stage BTO:0000854 one-cell stage VHOG:0000745 zygote VHOG:0000745 The first few specialized divisions of an activated animal egg; Stage consisting of division of cells in the early embryo. The zygotes of many species undergo rapid cell cycles with no significant growth, producing a cluster of cells the same size as the original zygote. The different cells derived from cleavage are called blastomeres and form a compact mass called the morula. Cleavage ends with the formation of the blastula. BILS:0000107 BilaDO:0000006 EFO:0001290 FBdv:00000054 MESH:D002970 OGES:000015 OGES:000020 PdumDv:0000200 Wikipedia:Cleavage_(embryo) XAO:1000004 ZFS:0000046 uberon UBERON:0000107 cleavage stage UBERON:0000107 The first few specialized divisions of an activated animal egg; Stage consisting of division of cells in the early embryo. The zygotes of many species undergo rapid cell cycles with no significant growth, producing a cluster of cells the same size as the original zygote. The different cells derived from cleavage are called blastomeres and form a compact mass called the morula. Cleavage ends with the formation of the blastula. GO:0040016 Wikipedia:Cleavage_(embryo) An early stage of embryonic development in animals. It is produced by cleavage of a fertilized ovum and consists of a spherical layer of around 128 cells surrounding a central fluid-filled cavity called the blastocoel. The blastula follows the morula and precedes the gastrula in the developmental sequence. BILS:0000108 BilaDO:0000007 EFO:0001282 OGES:000003 OGES:000016 OGES:000021 WBls:0000005 Wikipedia:Blastula XAO:1000003 ZFS:0000045 uberon UBERON:0000108 blastula stage UBERON:0000108 An early stage of embryonic development in animals. It is produced by cleavage of a fertilized ovum and consists of a spherical layer of around 128 cells surrounding a central fluid-filled cavity called the blastocoel. The blastula follows the morula and precedes the gastrula in the developmental sequence. Wikipedia:Blastula A stage defined by complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm. BILS:0000109 BilaDO:0000008 EFO:0001296 FBdv:00005317 OGES:000004 OGES:000019 WBls:0000010 XAO:1000005 ZFS:0000047 uberon blastocystis trilaminaris stage trilaminar blastocyst stage trilaminar blastoderm stage trilaminar disk stage trilaminar germ stage trilaminar stage UBERON:0000109 gastrula stage UBERON:0000109 A stage defined by complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm. GO:0007369 blastocystis trilaminaris stage https://orcid.org/0000-0002-6601-2165 trilaminar blastocyst stage https://orcid.org/0000-0002-6601-2165 trilaminar blastoderm stage https://orcid.org/0000-0002-6601-2165 trilaminar disk stage https://orcid.org/0000-0002-6601-2165 trilaminar germ stage https://orcid.org/0000-0002-6601-2165 trilaminar stage https://orcid.org/0000-0002-6601-2165 A chordate developmental stage defined by the formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system. BILS:0000110 BilaDO:0000009 XAO:1000006 uberon UBERON:0000110 neurula stage UBERON:0000110 A chordate developmental stage defined by the formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system. GO:0001841 A stage at which the ectoderm, endoderm, and mesoderm develop into the internal organs of the organism. BILS:0000111 BilaDO:0000010 OGES:000005 OGES:000032 Wikipedia:Organogenesis uberon segmentation stage UBERON:0000111 organogenesis stage UBERON:0000111 A stage at which the ectoderm, endoderm, and mesoderm develop into the internal organs of the organism. Wikipedia:Organogenesis The connective tissue located between the respiratory (airway and alveolar) epithelium, the capillary endothelium and pleural mesothelium; it contains basement membrane composed of collagen, elastin, proteoglycans, and fibronectin. EMAPA:35521 FMA:27533 MA:0001782 SCTID:201609008 connective tissue of lung pulmonary interstitium uberon lung interstitial tissue lung interstitium pulmonary connective tissue pulmonary interstitial tissue UBERON:0000114 lung connective tissue UBERON:0000114 The connective tissue located between the respiratory (airway and alveolar) epithelium, the capillary endothelium and pleural mesothelium; it contains basement membrane composed of collagen, elastin, proteoglycans, and fibronectin. ISBN:0-683-40008-8 MGI:anna MP:0002276 PMID:14635660 connective tissue of lung OBOL:automatic pulmonary interstitium FMA:27533 lung interstitial tissue MA:0001782 pulmonary connective tissue EMAPA:35521 The epithelial layer of the lung. BTO:0001653 EMAPA:32860 MA:0001783 epithelial tissue of lung epithelium of lung lung epithelial tissue uberon pulmonary epithelium UBERON:0000115 lung epithelium UBERON:0000115 The epithelial layer of the lung. MP:0006382 epithelial tissue of lung OBOL:automatic epithelium of lung OBOL:automatic lung epithelial tissue OBOL:automatic pulmonary epithelium BTO:0001653 A tube in the respiratory system. Examples: bronchus, bronchiole, trachea. FMA:12224 segment of tracheobronchial tree respiratory conducting tube segment of tracheobronchial tree tracheobronchial tree segment uberon airway UBERON:0000117 respiratory tube UBERON:0000117 A tube in the respiratory system. Examples: bronchus, bronchiole, trachea. GO:0030323 http://orcid.org/0000-0002-6601-2165 segment of tracheobronchial tree FMA:12224 respiratory conducting tube MP:0004391 segment of tracheobronchial tree FMA:12224 tracheobronchial tree segment FMA:12224 Structure derived from foregut that becomes a lung[GO]. BTO:0001643 EHDAA2:0004089 NCIT:C34260 NCIT:C34282 SCTID:361427007 Wikipedia:Respiratory_bud uberon primary lung bud respiratory diverticulum UBERON:0000118 lung bud UBERON:0000118 Structure derived from foregut that becomes a lung[GO]. GO:0060431 Wikipedia:Respiratory_bud primary lung bud GO:0060572 respiratory diverticulum Wikipedia:Lung_buds A fasciculated bundle of neuron projections (GO:0043005), largely or completely lacking synapses. UBERON:0005163 CARO:0001001 NLX:147821 funiculus nerve fiber bundle neural fiber bundle uberon UBERON:0000122 neuron projection bundle UBERON:0000122 A fasciculated bundle of neuron projections (GO:0043005), largely or completely lacking synapses. CARO:0001001 FBC:DOS FBbt:00005099 nerve fiber bundle FBbt:00005099 A spatially aggregated collection of nerve cell bodies in the CNS, consisting of one or more subpopulations that share cell type, chemical phenotype, and connections, and including nearby cells that share the same cell type, chemical phenotype, and connections. (CUMBO). nucleus AEO:0000136 FMA:83686 NCIT:C13197 NLX:28443 Wikipedia:Nucleus_(neuroanatomy) nervous system nucleus neuraxis nucleus neuronal nucleus nucleus of CNS uberon nucleus of neuraxis UBERON:0000125 neural nucleus UBERON:0000125 A spatially aggregated collection of nerve cell bodies in the CNS, consisting of one or more subpopulations that share cell type, chemical phenotype, and connections, and including nearby cells that share the same cell type, chemical phenotype, and connections. (CUMBO). NLX:28443 neuraxis nucleus FMA:83686 neuronal nucleus AEO:0000136 nucleus of CNS NLX:28443 Nucleus that receives projections from or contains neurons that send projections through one of the cranial nerves. FMA:54501 NLX:28532 SCTID:280160003 Wikipedia:Cranial_nerve_nucleus cranial neural nucleus nucleus of cranial nerve uberon UBERON:0000126 cranial nerve nucleus UBERON:0000126 Nucleus that receives projections from or contains neurons that send projections through one of the cranial nerves. NLX:28532 cranial neural nucleus FMA:54501 uberon UBERON:0000153 anterior region of body UBERON:0000153 uberon UBERON:0000154 posterior region of body UBERON:0000154 membrane FMA:30322 FMA:82500 MESH:D008566 NCIT:C12749 membranous organ component uberon UBERON:0000158 membranous layer UBERON:0000158 membranous organ component FMA:82500 Anatomical conduit that connects two adjacent body spaces (or a body space with the space surrounding the organism)[FMA,modified]. anatomical ostium ostium FMA:3724 SCTID:91837002 anatomical orifice hilum uberon UBERON:0000161 orifice UBERON:0000161 Anatomical conduit that connects two adjacent body spaces (or a body space with the space surrounding the organism)[FMA,modified]. FMA:3724 anatomical ostium FMA:3724 anatomical orifice FMA:3724 The proximal portion of the digestive tract, containing the oral cavity and bounded by the oral opening. In vertebrates, this extends to the pharynx and includes gums, lips, tongue and parts of the palate. Typically also includes the teeth, except where these occur elsewhere (e.g. pharyngeal jaws) or protrude from the mouth (tusks). AAO:0010355 BTO:0001090 BTO:0004698 CALOHA:TS-1315 EFO:0000825 EHDAA2:0001326 EHDAA:542 EMAPA:16262 FMA:49184 GAID:75 MA:0000341 MA:0002474 MAT:0000038 MESH:D009055 MIAA:0000038 SCTID:21082005 TADS:0000040 TAO:0000547 TAO:0000590 TGMA:0000131 VHOG:0000280 VHOG:0000812 Wikipedia:Mouth XAO:0003029 ZFA:0000547 ZFA:0000590 galen:Mouth http://purl.obolibrary.org/obo/uberon/images/lamprey_sucker_rosava_3238889218.jpg adult mouth uberon cavitas oris cavum oris mouth cavity oral region oral vestibule rima oris stoma stomatodaeum trophic apparatus vestibule of mouth vestibulum oris UBERON:0000165 mouth UBERON:0000165 The proximal portion of the digestive tract, containing the oral cavity and bounded by the oral opening. In vertebrates, this extends to the pharynx and includes gums, lips, tongue and parts of the palate. Typically also includes the teeth, except where these occur elsewhere (e.g. pharyngeal jaws) or protrude from the mouth (tusks). Wikipedia:Mouth https://github.com/obophenotype/uberon/wiki/The-digestive-tract cavitas oris BTO:0001090 cavum oris BTO:0001090 mouth cavity BTO:0001090 oral region EHDAA2:0001326 oral vestibule BTO:0001090 rima oris BTO:0001090 stomatodaeum VHOG:0000812 trophic apparatus http://orcid.org/0000-0002-6601-2165 vestibule of mouth BTO:0001090 vestibulum oris BTO:0001090 The orifice that connects the mouth to the exterior of the body. FMA:59806 oral fissure oral orifice uberon oral part of face UBERON:0000166 oral opening UBERON:0000166 The orifice that connects the mouth to the exterior of the body. https://github.com/obophenotype/uberon/wiki/The-digestive-tract oral fissure FMA:59806 oral orifice FMA:59806 Anatomical cavity at the start of the digestive tract that that is enclosed by the mouth. The boundaries and contents vary depending on the species. In vertebrates, the boundaries are the oral opening, the cheeks, the palate and (if present) the palatoglossal arch - if this is not present then the mouth and pharynx form the oropharyngeal cavity. The buccal cavity contains the teeth, tongue and palate (when present). AAO:0000053 AAO:0000960 BSA:0000107 CALOHA:TS-1315 EFO:0001975 EHDAA2:0001324 EHDAA:6970 EMAPA:17411 EMAPA:18399 EV:0100057 FMA:20292 HAO:0000669 NCIT:C12421 SCTID:181220002 TAO:0001027 TGMA:0000102 VHOG:0000188 WBbt:0005255 XAO:0000126 ZFA:0001027 buccal cavity cavity of mouth uberon bucca UBERON:0000167 oral cavity UBERON:0000167 Anatomical cavity at the start of the digestive tract that that is enclosed by the mouth. The boundaries and contents vary depending on the species. In vertebrates, the boundaries are the oral opening, the cheeks, the palate and (if present) the palatoglossal arch - if this is not present then the mouth and pharynx form the oropharyngeal cavity. The buccal cavity contains the teeth, tongue and palate (when present). ISBN:0073040584 https://github.com/obophenotype/uberon/wiki/The-digestive-tract https://orcid.org/0000-0002-6601-2165 buccal cavity FMA:20292 ISBN:0073040584 1 1 The pair of anatomical structures comprised of a left lung and right lung. FMA:68877 lungs lungs pair set of lungs uberon UBERON:0000170 pair of lungs UBERON:0000170 The pair of anatomical structures comprised of a left lung and right lung. http://orcid.org/0000-0002-6601-2165 Organ that functions in gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. SCTID:272626006 SPD:0000428 TGMA:0001247 apparatus respiratorius organ breathing organ organ of apparatus respiratorius organ of respiratory system respiratory organ respiratory system organ uberon gas exchange organ UBERON:0000171 respiration organ UBERON:0000171 Organ that functions in gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. GO:0007585 apparatus respiratorius organ OBOL:automatic organ of apparatus respiratorius OBOL:automatic organ of respiratory system OBOL:automatic respiratory system organ OBOL:automatic A fluid that is composed of blood plasma and erythrocytes. AAO:0000046 BTO:0000089 CALOHA:TS-0079 EFO:0000296 EHDAA2:0000176 EHDAA:418 EMAPA:16332 ENVO:02000027 EV:0100047 FMA:9670 GAID:965 MA:0000059 MESH:D001769 MIAA:0000315 NCIT:C12434 TAO:0000007 VHOG:0000224 Wikipedia:Blood XAO:0000124 ZFA:0000007 galen:Blood portion of blood vertebrate blood uberon whole blood UBERON:0000178 blood UBERON:0000178 A fluid that is composed of blood plasma and erythrocytes. FMA:9670 Wikipedia:Blood http://orcid.org/0000-0002-6601-2165 https://github.com/obophenotype/uberon/issues/9 whole blood BTO:0000089 Circulating fluid that is part of the hemolymphoid system. Blood, lymph, interstitial fluid or its analogs. 2009-04-08T04:38:19Z CARO:0000081 uberon blood or blood analog circulating fluid UBERON:0000179 haemolymphatic fluid UBERON:0000179 Circulating fluid that is part of the hemolymphoid system. Blood, lymph, interstitial fluid or its analogs. http://orcid.org/0000-0002-6601-2165 Dorsal part (roof region) of the telencephalon[GO]. 2009-04-18T12:03:09Z UBERON:0007333 BTO:0003399 DMBA:15903 EFO:0003534 SCTID:369224000 TAO:0000505 TAO:0007007 Wikipedia:Avian_pallium Wikipedia:Pallium_(neuroanatomy) ZFA:0000505 neuronames:3240 area dorsalis telencephali dorsal part of telencephalon dorsal telencephalic area dorsal telencephalon uberon UBERON:0000203 pallium UBERON:0000203 Dorsal part (roof region) of the telencephalon[GO]. GO:0021543 ISBN:0471888893 Wikipedia:Pallium_(neuroanatomy) https://github.com/obophenotype/uberon/issues/287 area dorsalis telencephali ZFA:0000505 dorsal part of telencephalon ISBN:0471888893 dorsal telencephalic area ZFA:0000505 dorsal telencephalon ZFA:0000505 A layer of membrane around a tendon. It has 2 layers: synovial sheath + fibrous tendon sheath. BTO:0000051 FMA:45087 FMA:76715 NCIT:C96299 SCTID:361885006 Wikipedia:Tendon_sheath synovial tendon sheath uberon UBERON:0000304 tendon sheath UBERON:0000304 A layer of membrane around a tendon. It has 2 layers: synovial sheath + fibrous tendon sheath. Wikipedia:Tendon_sheath synovial tendon sheath FMA:45087 Organism at the blastula stage - an early stage of embryonic development in animals. It is produced by cleavage of a fertilized ovum and consists of a spherical layer of around 128 cells surrounding a central fluid-filled cavity called the blastocoel. The blastula follows the morula and precedes the gastrula in the developmental sequence. UBERON:0007011 BILA:0000059 BTO:0000128 GAID:1294 MESH:D036703 OGEM:000006 Wikipedia:Blastula blastula embryo uberon blastosphere UBERON:0000307 blastula UBERON:0000307 Organism at the blastula stage - an early stage of embryonic development in animals. It is produced by cleavage of a fertilized ovum and consists of a spherical layer of around 128 cells surrounding a central fluid-filled cavity called the blastocoel. The blastula follows the morula and precedes the gastrula in the developmental sequence. Wikipedia:Blastula blastula embryo BILA:0000059 blastosphere Wikipedia:Blastula The branched tubular glands found in the mucosa of the fundus and body of the stomach which contain parietal cells that secrete hydrochloric acid and zymogenic cells that produce pepsin. BTO:0000503 EMAPA:27181 FMA:14919 uberon UBERON:0000325 gastric gland UBERON:0000325 The branched tubular glands found in the mucosa of the fundus and body of the stomach which contain parietal cells that secrete hydrochloric acid and zymogenic cells that produce pepsin. MGI:anna The wall of the digestive tract. This encompasses all parts of the digestive tract with the exception of the lumen (cavity). BTO:0000547 FMA:45653 digestive tract wall wall of digestive tract wall of gut uberon wall of alimentary tract UBERON:0000328 gut wall UBERON:0000328 The wall of the digestive tract. This encompasses all parts of the digestive tract with the exception of the lumen (cavity). http://orcid.org/0000-0002-6601-2165 wall of gut FMA:45653 Bone marrow in which the fat cells predominate in the meshes of the reticular network. BTO:0000635 FMA:74596 SCTID:328639002 SCTID:5023006 yellow marrow uberon fat marrow UBERON:0000332 yellow bone marrow UBERON:0000332 Bone marrow in which the fat cells predominate in the meshes of the reticular network. http://medical-dictionary.thefreedictionary.com/Yellow+Marrow yellow marrow BTO:0000635 fat marrow BTO:0000635 A lining of mostly endodermal origin, covered in epithelium, which is involved in absorption and secretion. They line various body cavities that are exposed to the external environment and internal organs. It is at several places continuous with skin: at the nostrils, the lips, the ears, the genital area, and the anus. The sticky, thick fluid secreted by the mucous membranes and gland is termed mucus. The term mucous membrane refers to where they are found in the body and not every mucous membrane secretes mucus[WP]. AEO:0000199 BTO:0000886 CALOHA:TS-2031 EHDAA2_RETIRED:0003234 EV:0100382 FMA:85355 FMA:85358 GAID:297 MESH:D009092 NCIT:C13166 SCTID:361693009 Wikipedia:Mucous_membrane galen:Mucosa mucosa of organ mucosa of organ part mucosal region mucous membrane organ mucosa uberon region of mucosa UBERON:0000344 mucosa UBERON:0000344 A lining of mostly endodermal origin, covered in epithelium, which is involved in absorption and secretion. They line various body cavities that are exposed to the external environment and internal organs. It is at several places continuous with skin: at the nostrils, the lips, the ears, the genital area, and the anus. The sticky, thick fluid secreted by the mucous membranes and gland is termed mucus. The term mucous membrane refers to where they are found in the body and not every mucous membrane secretes mucus[WP]. Wikipedia:Mucous_membrane mucosa of organ FMA:85355 mucosa of organ part FMA:85358 mucosal region FMA:85358 mucous membrane FMA:85355 organ mucosa FMA:85355 region of mucosa FMA:85358 Functional part of an organ in the body. This is in contrast to the stroma, which refers to the structural tissue of organs, being exactly, connective tissues. EHDAA:3015 EHDAA:3905 EHDAA:3999 EHDAA:4005 EHDAA:6899 EHDAA:6903 EHDAA:6994 EHDAA:8086 EHDAA:9182 EHDAA:9190 EHDAA:9196 EHDAA:9202 FMA:45732 NCIT:C74601 Wikipedia:Parenchyma uberon UBERON:0000353 parenchyma UBERON:0000353 Functional part of an organ in the body. This is in contrast to the stroma, which refers to the structural tissue of organs, being exactly, connective tissues. Wikipedia:Parenchyma A mucosa that is part of a pharynx [Automatically generated definition]. UBERON:0003344 BTO:0001047 EMAPA:26957 FMA:55031 MA:0003143 SCTID:362121003 mucosa of organ of pharynx mucosa of pharynx mucous membrane of pharynx organ mucosa of pharynx pharynx mucosa pharynx mucosa of organ pharynx mucous membrane pharynx organ mucosa tunica mucosa pharyngis uberon mucous membrane of the pharynx UBERON:0000355 pharyngeal mucosa UBERON:0000355 A mucosa that is part of a pharynx [Automatically generated definition]. OBOL:automatic mucosa of organ of pharynx OBOL:automatic mucosa of pharynx OBOL:automatic mucous membrane of pharynx FMA:55031 OBOL:automatic organ mucosa of pharynx OBOL:automatic pharynx mucosa OBOL:automatic pharynx mucosa of organ OBOL:automatic pharynx mucous membrane OBOL:automatic pharynx organ mucosa OBOL:automatic mucous membrane of the pharynx BTO:0001047 The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm[GO]. BTO:0001099 CALOHA:TS-0076 EFO:0000295 EMAPA:36035 EV:0100394 FMA:83041 GAID:1153 MESH:D001755 NCIT:C13739 SCTID:308837009 Wikipedia:Blastocyst uberon blastula UBERON:0000358 blastocyst UBERON:0000358 The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm[GO]. GO:0001824 Wikipedia:Blastocyst blastula FMA:83041 The red vascular substance consisting of connective tissue and blood vessels, containing primitive blood cells, macrophages, megakaryocytes, and fat cells. Red marrow is found in the cavities of many bones. It manufactures and releases leukocytes and erythrocytes into the bloodstream. BTO:0001160 FMA:74595 SCTID:328538003 SCTID:75330005 parenchymal red marrow red marrow uberon parenchyma of none marrow marrow UBERON:0000361 red bone marrow UBERON:0000361 The red vascular substance consisting of connective tissue and blood vessels, containing primitive blood cells, macrophages, megakaryocytes, and fat cells. Red marrow is found in the cavities of many bones. It manufactures and releases leukocytes and erythrocytes into the bloodstream. http://medical-dictionary.thefreedictionary.com/red+marrow parenchymal red marrow http://orcid.org/0000-0002-6601-2165 red marrow BTO:0001160 parenchyma of none marrow marrow http://orcid.org/0000-0002-6601-2165 Extraembryonic cells of trophoblastic shell surrounding embryo, outside the cytotrophoblast layer, involved with implantation of the blastocyst by eroding extracellular matrix surrounding maternal endometrial cells at site of implantation, also contribute to villi. (dark staining, multinucleated). BTO:0001335 EHDAA:129 EHDAA:91 EMAPA:16068 FMA:83040 NCIT:C33918 SCTID:256965005 Wikipedia:Syncytiotrophoblast syncytial trophoblast syntrophoblast layer uberon syncitiotrophoblast syntrophoblast UBERON:0000371 syncytiotrophoblast UBERON:0000371 Extraembryonic cells of trophoblastic shell surrounding embryo, outside the cytotrophoblast layer, involved with implantation of the blastocyst by eroding extracellular matrix surrounding maternal endometrial cells at site of implantation, also contribute to villi. (dark staining, multinucleated). Wikipedia:Syncytiotrophoblast http://embryology.med.unsw.edu.au/Notes/placenta5.htm syncytial trophoblast FMA:83040 syntrophoblast layer ISBN:0073040584 The motor and sensory nerve subdivision of the trigeminal nerve that transmits sensory information from the auricle, the external acoustic meatus, tympanic membrane, temporal region, the cheek, the skin overlying the mandible, the anterior portion of the tongue, the floor of the mouth, lower teeth and gingiva and transmits motor information from the muscles of mastication, the mylohyoid muscle and digastric muscle and the muscles tensor tympani and tensor veli palatini. AAO:0010688 AAO:0010703 BTO:0001375 EHDAA2:0002086 EMAPA:17798 FMA:52996 GAID:834 MA:0001101 MESH:D008340 NCIT:C32779 SCTID:280212008 VHOG:0001345 Wikipedia:Mandibular_nerve inferior maxillary nerve mandibular division [V3] mandibular division [Vc] mandibular division of fifth cranial nerve mandibular division of trigeminal nerve [Vc; V3] mandibular nerve [V3] mandibular nerve [Vc] nervus mandibularis [Vc; V3] ramus mandibularis (ramus V3) third division of fifth cranial nerve third division of trigeminal nerve trigeminal V nerve mandibular division uberon nervus mandibularis trigeminal nerve mandibular division UBERON:0000375 mandibular nerve UBERON:0000375 The motor and sensory nerve subdivision of the trigeminal nerve that transmits sensory information from the auricle, the external acoustic meatus, tympanic membrane, temporal region, the cheek, the skin overlying the mandible, the anterior portion of the tongue, the floor of the mouth, lower teeth and gingiva and transmits motor information from the muscles of mastication, the mylohyoid muscle and digastric muscle and the muscles tensor tympani and tensor veli palatini. MP:0009800 Wikipedia:Mandibular_nerve inferior maxillary nerve FMA:52996 mandibular division [V3] FMA:52996 mandibular division [Vc] FMA:52996 mandibular division of fifth cranial nerve FMA:52996 mandibular division of trigeminal nerve [Vc; V3] FMA:52996 mandibular nerve [V3] FMA:52996 mandibular nerve [Vc] FMA:52996 nervus mandibularis [Vc; V3] FMA:52996 ramus mandibularis (ramus V3) AAO:0010688 third division of fifth cranial nerve FMA:52996 third division of trigeminal nerve FMA:52996 trigeminal V nerve mandibular division MA:0001101 nervus mandibularis BTO:0001375 trigeminal nerve mandibular division EMAPA:17798 The sensory nerve subdivision of the trigeminal nerve that transmits sensory information from the palate, upper teeth and gingiva, the skin between the palpebral fissure and the mouth, and from the nasal cavity and maxillary sinuses. AAO:0010670 BTO:0001378 EHDAA2:0002087 EMAPA:17799 FMA:52724 GAID:836 MA:0001103 MESH:D008442 SCTID:280211001 VHOG:0001346 Wikipedia:Maxillary_nerve maxillary division [V2] maxillary division [Vb] maxillary division of fifth cranial nerve maxillary division of trigeminal nerve (Vb; V2) maxillary nerve [V2] maxillary nerve [Vb] nervus maxillaris (Vb; V2) ramus maxillaris (ramus V2) second division of fifth cranial nerve second division of trigeminal nerve trigeminal V nerve maxillary division uberon nervus maxillaris trigeminal nerve maxillary division UBERON:0000377 maxillary nerve UBERON:0000377 The sensory nerve subdivision of the trigeminal nerve that transmits sensory information from the palate, upper teeth and gingiva, the skin between the palpebral fissure and the mouth, and from the nasal cavity and maxillary sinuses. MP:0009799 Wikipedia:Maxillary_nerve maxillary division [V2] FMA:52724 maxillary division [Vb] FMA:52724 maxillary division of fifth cranial nerve FMA:52724 maxillary division of trigeminal nerve (Vb; V2) FMA:52724 maxillary nerve [V2] FMA:52724 maxillary nerve [Vb] FMA:52724 nervus maxillaris (Vb; V2) FMA:52724 ramus maxillaris (ramus V2) AAO:0010670 second division of fifth cranial nerve FMA:52724 second division of trigeminal nerve FMA:52724 trigeminal V nerve maxillary division MA:0001103 nervus maxillaris BTO:0001378 trigeminal nerve maxillary division EMAPA:17799 The muscular portion of the tongue. BTO:0001386 EHDAA2:0002065 EHDAA:9146 EMAPA:17883 FMA:46689 MA:0001596 NCIT:C49301 NCIT:C52707 SCTID:244781004 VHOG:0001390 Wikipedia:Muscles_of_tongue muscle of tongue muscle organ of tongue skeletal muscle tissue of tongue tongue skeletal muscle tongue skeletal muscle tissue uberon UBERON:0000378 tongue muscle UBERON:0000378 The muscular portion of the tongue. MP:0004136 Wikipedia:Muscles_of_tongue muscle of tongue FMA:46689 muscle organ of tongue OBOL:accepted skeletal muscle tissue of tongue OBOL:automatic tongue skeletal muscle OBOL:automatic tongue skeletal muscle tissue OBOL:automatic A mucosa that is part of a respiratory airway. BTO:0001390 FMA:7471 SCTID:660006 mucosa of organ of trachea mucosa of organ of windpipe mucosa of trachea mucosa of windpipe mucous membrane of trachea mucous membrane of windpipe organ mucosa of trachea organ mucosa of windpipe trachea mucosa trachea mucosa of organ trachea mucous membrane trachea organ mucosa tracheal mucous membrane tunica mucosa (tracheae) windpipe mucosa windpipe mucosa of organ windpipe mucous membrane windpipe organ mucosa uberon UBERON:0000379 tracheal mucosa UBERON:0000379 A mucosa that is part of a respiratory airway. OBOL:automatic mucosa of organ of trachea OBOL:automatic mucosa of organ of windpipe OBOL:automatic mucosa of trachea OBOL:automatic mucosa of windpipe OBOL:automatic mucous membrane of trachea FMA:7471 OBOL:automatic mucous membrane of windpipe OBOL:automatic organ mucosa of trachea OBOL:automatic organ mucosa of windpipe OBOL:automatic trachea mucosa OBOL:automatic trachea mucosa of organ OBOL:automatic trachea mucous membrane OBOL:automatic trachea organ mucosa OBOL:automatic tracheal mucous membrane FMA:7471 tunica mucosa (tracheae) FMA:7471 windpipe mucosa OBOL:automatic windpipe mucosa of organ OBOL:automatic windpipe mucous membrane OBOL:automatic windpipe organ mucosa OBOL:automatic The subdivision of the musculoskeletal system that consists of all the muscles of the body[VSAO, modified]. AAO:0000307 BILA:0000088 BTO:0001369 BTO:0001485 EFO:0000801 FMA:72954 MA:0002888 MAT:0000025 MIAA:0000025 VSAO:0000033 XAO:0004042 muscle system muscle system of body muscular system musculature system set of all muscles set of muscles of body vertebrate muscular system uberon muskelsystem UBERON:0000383 musculature of body UBERON:0000383 The subdivision of the musculoskeletal system that consists of all the muscles of the body[VSAO, modified]. VSAO:0000033 muscular system FMA:72954 musculature system BILA:0000088 set of all muscles FMA:72954 set of muscles of body FMA:72954 vertebrate muscular system BTO:0001369 muskelsystem BTO:0001485 Tissue that surrounds the lens nucleus. BTO:0001632 CALOHA:TS-0542 FMA:58970 MESH:D007904 SCTID:280626006 cortex of lens uberon UBERON:0000389 lens cortex UBERON:0000389 Tissue that surrounds the lens nucleus. http://www.thefreedictionary.com/lens+cortex cortex of lens FMA:58970 The core of the crystalline lens, surrounded by the cortex. BTO:0001633 FMA:58971 MESH:D007907 SCTID:280628007 nucleus of lens uberon UBERON:0000390 lens nucleus UBERON:0000390 The core of the crystalline lens, surrounded by the cortex. BTO:0001633 nucleus of lens FMA:58971 A gland in which the principal secretory cells are serous secreting cells. BTO:0001837 FMA:62889 Wikipedia:Serous_gland uberon UBERON:0000409 serous gland UBERON:0000409 A gland in which the principal secretory cells are serous secreting cells. http://orcid.org/0000-0002-6601-2165 http://www.siumed.edu/~dking2/intro/glands.htm A mucosa that is part of a bronchus [Automatically generated definition]. BTO:0001846 FMA:62652 SCTID:30802009 bronchi mucosa bronchi mucosa of organ bronchi mucous membrane bronchi organ mucosa bronchial trunk mucosa bronchial trunk mucosa of organ bronchial trunk mucous membrane bronchial trunk organ mucosa bronchus mucosa bronchus mucosa of organ bronchus mucous membrane bronchus organ mucosa mucosa of bronchi mucosa of bronchial trunk mucosa of bronchus mucosa of organ of bronchi mucosa of organ of bronchial trunk mucosa of organ of bronchus mucous membrane of bronchi mucous membrane of bronchial trunk mucous membrane of bronchus organ mucosa of bronchi organ mucosa of bronchial trunk organ mucosa of bronchus uberon UBERON:0000410 bronchial mucosa UBERON:0000410 A mucosa that is part of a bronchus [Automatically generated definition]. OBOL:automatic bronchi mucosa OBOL:automatic bronchi mucosa of organ OBOL:automatic bronchi mucous membrane OBOL:automatic bronchi organ mucosa OBOL:automatic bronchial trunk mucosa OBOL:automatic bronchial trunk mucosa of organ OBOL:automatic bronchial trunk mucous membrane OBOL:automatic bronchial trunk organ mucosa OBOL:automatic bronchus mucosa OBOL:automatic bronchus mucosa of organ OBOL:automatic bronchus mucous membrane OBOL:automatic bronchus organ mucosa OBOL:automatic mucosa of bronchi OBOL:automatic mucosa of bronchial trunk OBOL:automatic mucosa of bronchus OBOL:automatic mucosa of organ of bronchi OBOL:automatic mucosa of organ of bronchial trunk OBOL:automatic mucosa of organ of bronchus OBOL:automatic mucous membrane of bronchi OBOL:automatic mucous membrane of bronchial trunk OBOL:automatic mucous membrane of bronchus FMA:62652 OBOL:automatic organ mucosa of bronchi OBOL:automatic organ mucosa of bronchial trunk OBOL:automatic organ mucosa of bronchus OBOL:automatic An anatomical wall that is part of an artery [Automatically generated definition]. BTO:0002009 FMA:14155 galen:ArterialWall arterial wall wall of artery uberon UBERON:0000415 artery wall UBERON:0000415 An anatomical wall that is part of an artery [Automatically generated definition]. OBOL:automatic arterial wall FMA:14155 wall of artery FMA:14155 A portion of organism substance that is produced by exocrine glands. UBERON:0006540 secretion AEO:0001005 BTO:0002977 BTO:0002979 EMAPA:36535 FMA:9675 MA:0002504 MESH:D012634 NCIT:C34062 galen:Secretion bodily secretion exocrine gland fluid/secretion secreted substance uberon exocrine gland fluid exocrine gland fluid or secretion exocrine gland secretion external secretion UBERON:0000456 secretion of exocrine gland UBERON:0000456 A portion of organism substance that is produced by exocrine glands. http://orcid.org/0000-0002-6601-2165 secretion FMA:9675 bodily secretion MESH:D012634 exocrine gland fluid/secretion MA:0002504 external secretion BTO:0002977 Any of several small branches of the internal carotid artery that supply the trigeminal ganglion and the walls of the cavernous and petrosal sinuses. BTO:0002996 FMA:70527 cavernous branch of cavernous part of internal carotid artery uberon UBERON:0000457 cavernous artery UBERON:0000457 Any of several small branches of the internal carotid artery that supply the trigeminal ganglion and the walls of the cavernous and petrosal sinuses. BTO:0002996 cavernous branch of cavernous part of internal carotid artery FMA:70527 Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body. AAO:0010839 AEO:0000004 BILA:0000004 CALOHA:TS-2101 CARO:0000004 EHDAA2:0003004 EMAPA:35178 FMA:9669 HAO:0000004 MA:0002450 NCIT:C13236 SPD:0000008 TAO:0001487 TGMA:0001824 VHOG:0001726 XAO:0004001 ZFA:0001487 galen:BodySubstance body fluid or substance body substance organism substance portion of body substance portion of organism substance uberon UBERON:0000463 organism substance UBERON:0000463 Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body. http://orcid.org/0000-0001-9114-8737 body fluid or substance MA:0002450 body substance FMA:9669 organism substance CARO:0000004 portion of body substance FMA:9669 portion of organism substance ZFA:0001487 Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures. lumen space AAO:0010110 AEO:0000005 BILA:0000005 CARO:0000005 EHDAA2:0003005 FMA:5897 HAO:0000005 NCIT:C94478 TAO:0001668 TGMA:0001825 VHOG:0001728 XAO:0003190 ZFA:0001643 lumen space uberon UBERON:0000464 anatomical space UBERON:0000464 Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures. http://orcid.org/0000-0001-9114-8737 Anatomical entity that has mass. AAO:0010264 AEO:0000006 BILA:0000006 CARO:0000006 EHDAA2:0003006 FMA:67165 HAO:0000006 TAO:0001836 TGMA:0001826 VHOG:0001721 uberon UBERON:0000465 material anatomical entity UBERON:0000465 Anatomical entity that has mass. http://orcid.org/0000-0001-9114-8737 Anatomical entity that has no mass. AAO:0010265 AEO:0000007 BILA:0000007 CARO:0000007 EHDAA2:0003007 FMA:67112 HAO:0000007 TAO:0001835 TGMA:0001827 VHOG:0001727 immaterial physical anatomical entity uberon UBERON:0000466 immaterial anatomical entity UBERON:0000466 Anatomical entity that has no mass. http://orcid.org/0000-0001-9114-8737 immaterial physical anatomical entity FMA:67112 Multicellular, connected anatomical structure that has multiple organs as parts and whose parts work together to achieve some shared function. system AAO:0000007 AEO:0000011 BILA:0000011 BIRNLEX:14 BSA:0000049 CALOHA:TS-2088 CARO:0000011 EHDAA2:0003011 EHDAA:392 EMAPA:16103 EV:0100000 FMA:7149 HAO:0000011 MA:0000003 NCIT:C12919 SCTID:278195005 TAO:0001439 TGMA:0001831 VHOG:0001725 WBbt:0005746 WBbt:0005763 Wikipedia:Organ_system XAO:0003002 ZFA:0001439 galen:AnatomicalSystem body system connected anatomical system organ system uberon UBERON:0000467 anatomical system UBERON:0000467 Multicellular, connected anatomical structure that has multiple organs as parts and whose parts work together to achieve some shared function. CARO:0000011 system GO:0048731 body system BIRNLEX:14 connected anatomical system CARO:0000011 Anatomical structure that is an individual member of a species and consists of more than one cell. organism AAO:0010026 AEO:0000191 BILA:0000012 BIRNLEX:18 BSA:0000038 BTO:0000042 CARO:0000012 EFO:0002906 EHDAA2:0003103 EHDAA2:0003191 EHDAA:1 EMAPA:25765 EV:0100016 FMA:256135 HAO:0000012 NCIT:C13041 SCTID:243928005 TADS:0000001 TAO:0001094 TGMA:0001832 VHOG:0000671 WBbt:0007833 Wikipedia:Multi-cellular_organism XAO:0003004 ZFA:0001094 galen:Organism ncithesaurus:Whole_Organism multi-cellular organism uberon Koerper body whole body whole organism UBERON:0000468 multicellular organism UBERON:0000468 Anatomical structure that is an individual member of a species and consists of more than one cell. CARO:0000012 Wikipedia:Multi-cellular_organism http://orcid.org/0000-0001-9114-8737 organism FBbt:00000001 VHOG:0000671 WBbt:0007833 multi-cellular organism CARO:0000012 Koerper BTO:0001489 body AEO:0000103 BIRNLEX:18 FMA:256135 NCIT:C13041 whole body BTO:0001489 whole organism FBbt:00000001 The organs and associated structures associated with bearing offspring in a female animal. BTO:0000083 CALOHA:TS-1303 EFO:0000969 EHDAA2:0000506 EHDAA:8116 EMAPA:17959 EV:0100110 FMA:45663 GAID:364 HAO:0000324 MA:0000381 MESH:D005836 MIAA:0000028 NCIT:C12402 SCTID:361386004 TGMA:0000635 VHOG:0000726 Wikipedia:Female_genitalia WikipediaCategory:Female_reproductive_system XAO:0000156 female organism genitalia female organism reproductive system genitalia of female organism reproductive system of female organism uberon female genital system female genital tract female genitalia female reproductive tract gynaecological tissue systema genitale femininum UBERON:0000474 female reproductive system UBERON:0000474 The organs and associated structures associated with bearing offspring in a female animal. MP:0001119 Wikipedia:Female_genitalia http://orcid.org/0000-0002-6601-2165 female organism genitalia OBOL:automatic female organism reproductive system OBOL:automatic genitalia of female organism OBOL:automatic reproductive system of female organism OBOL:automatic female reproductive tract MA:0000381 gynaecological tissue BTO:0000083 systema genitale femininum BTO:0000083 Anatomical structure which is a subdivision of a whole organism, consisting of components of multiple anatomical systems, largely surrounded by a contiguous region of integument. AAO:0010053 AEO:0000032 BILA:0000032 BIRNLEX:7 CALOHA:TS-2084 CARO:0000032 EFO:0000808 EHDAA2:0003032 EMAPA:36031 FMA:7153 HAO:0000032 MA:0002433 MAT:0000293 MESH:D001829 MIAA:0000293 NCIT:C32221 TAO:0001308 TGMA:0001840 VHOG:0001758 Wikipedia:Body_part XAO:0003013 ZFA:0001308 galen:BodyPart anatomic region uberon body part body region cardinal body part UBERON:0000475 organism subdivision UBERON:0000475 Anatomical structure which is a subdivision of a whole organism, consisting of components of multiple anatomical systems, largely surrounded by a contiguous region of integument. CARO:0000032 CARO:DOS http://orcid.org/0000-0001-9114-8737 anatomic region MA:0002433 body region FMA:7153 cardinal body part FMA:7153 Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue. AAO:0010268 AEO:0000040 BILA:0000040 CARO:0000040 EHDAA2:0003040 FMA:63863 HAO:0000040 TAO:0000382 TGMA:0001841 XAO:0003162 ZFA:0000382 uberon UBERON:0000476 acellular anatomical structure UBERON:0000476 Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue. http://orcid.org/0000-0001-9114-8737 Anatomical group whose component anatomical structures lie in close proximity to each other. VHOG:0001737 uberon UBERON:0000477 anatomical cluster UBERON:0000477 Anatomical group whose component anatomical structures lie in close proximity to each other. FBbt:00007277 A multicellular anatomical structure that is associated with an embryo and derived from the zygote from which it develops, but which does not contribute to the embryo proper or to structures that are part of the same organism after embryogenesis. AAO:0010020 AEO:0000042 BILA:0000042 CALOHA:TS-2119 CARO:0000042 EHDAA2:0003042 EHDAA:46 FMA:85537 HAO:0000042 NCIT:C34055 SCTID:314908006 TAO:0000020 TGMA:0001843 VHOG:0000292 XAO:0004005 ZFA:0000020 extra-embryonic structure uberon extraembryonic tissue UBERON:0000478 see also conceptus extraembryonic component in EHDAA2. extraembryonic structure UBERON:0000478 A multicellular anatomical structure that is associated with an embryo and derived from the zygote from which it develops, but which does not contribute to the embryo proper or to structures that are part of the same organism after embryogenesis. CARO:DOS http://orcid.org/0000-0001-9114-8737 https://cedar.bio.indiana.edu/trac/env/ontologies/ticket/279 Multicellular anatomical structure that consists of many cells of one or a few types, arranged in an extracellular matrix such that their long-range organisation is at least partly a repetition of their short-range organisation. AAO:0000607 AAO:0010054 AEO:0000043 BILA:0000043 BIRNLEX:19 CALOHA:TS-2090 CARO:0000043 EHDAA2:0003043 EMAPA:35868 FMA:9637 HAO:0000043 MA:0003002 MESH:D014024 NCIT:C12801 TAO:0001477 TGMA:0001844 VHOG:0001757 WBbt:0005729 XAO:0003040 ZFA:0001477 galen:Tissue portion of tissue tissue portion simple tissue uberon UBERON:0000479 tissue UBERON:0000479 Multicellular anatomical structure that consists of many cells of one or a few types, arranged in an extracellular matrix such that their long-range organisation is at least partly a repetition of their short-range organisation. CARO:0000043 portion of tissue CARO:0000043 simple tissue AEO:0000043 Anatomical structure that has as its parts two or more portions of tissue of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types. AAO:0010048 AEO:0000055 BILA:0000055 CARO:0000055 EHDAA2:0003055 HAO:0000055 TAO:0001488 TGMA:0001847 VHOG:0001762 XAO:0003037 ZFA:0001488 uberon UBERON:0000481 multi-tissue structure UBERON:0000481 Anatomical structure that has as its parts two or more portions of tissue of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types. CARO:0000055 http://orcid.org/0000-0001-9114-8737 Acellular anatomical structure that consists of a thin sheet of fibrous proteins that underlie and support the cells of an epithelium. It separates the cells of an epithelium from any underlying tissue. AAO:0010269 AEO:0000065 BILA:0000065 CARO:0000065 EHDAA2:0003065 FMA:62918 HAO:0000065 MESH:D001485 NCIT:C32186 NIF_Subcellular:sao1397492660 TAO:0001485 TGMA:0001850 VHOG:0001592 WBbt:0005756 Wikipedia:Basal_lamina XAO:0003163 ZFA:0001485 basal lamina of connective tissue uberon basal lamina UBERON:0000482 basal lamina of epithelium UBERON:0000482 Acellular anatomical structure that consists of a thin sheet of fibrous proteins that underlie and support the cells of an epithelium. It separates the cells of an epithelium from any underlying tissue. http://orcid.org/0000-0001-9114-8737 basal lamina of connective tissue FMA:62918 basal lamina CARO:0000065 Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina. Examples: simple squamous epithelium, glandular cuboidal epithelium, transitional epithelium, myoepithelium[CARO]. AAO:0000144 AAO:0010055 AEO:0000066 BILA:0000066 BTO:0000416 CALOHA:TS-0288 CARO:0000066 EHDAA2:0003066 EMAPA:32738 FMA:9639 GAID:402 HAO:0000066 MA:0003060 MESH:D004848 NCIT:C12710 SCTID:31610004 TAO:0001486 VHOG:0000387 Wikipedia:Epithelium XAO:0003045 ZFA:0001486 epithelial tissue portion of epithelium uberon UBERON:0000483 Editor note: surface epithelium may contain non-epithelial cells, such as melanocytes, lymphocytes and dendritic cells, within the sheet of epithelial cells. Do we consider these part of the epithelium, or located-in it? epithelium UBERON:0000483 Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina. Examples: simple squamous epithelium, glandular cuboidal epithelium, transitional epithelium, myoepithelium[CARO]. Wikipedia:Epithelium http://orcid.org/0000-0001-9114-8737 portion of epithelium FMA:9639 Unilaminar epithelium that consists of a single layer of cuboidal cells. AAO:0010064 AEO:0000067 BILA:0000067 CARO:0000067 EHDAA2:0003067 FMA:45566 HAO:0000067 NCIT:C33553 TAO:0001497 Wikipedia:Simple_cuboidal_epithelium XAO:0004009 ZFA:0001497 epithelium simplex cuboideum uberon UBERON:0000484 simple cuboidal epithelium UBERON:0000484 Unilaminar epithelium that consists of a single layer of cuboidal cells. Wikipedia:Simple_cuboidal_epithelium http://orcid.org/0000-0001-9114-8737 Unilaminar epithelium, which consists of a single layer of columnar cells. Examples: ciliated columnar epithelium, gastric epithelium, microvillus columnar epithelium.[FMA]. columnar epithelium columnar epithlium AAO:0010063 AEO:0000068 BILA:0000068 CARO:0000068 EHDAA2_RETIRED:0003068 FMA:45567 HAO:0000068 NCIT:C33552 SCTID:32210007 TAO:0001496 Wikipedia:Simple_columnar_epithelium XAO:0004008 ZFA:0001496 epithelium simplex columnare simple columnar epithelium uberon UBERON:0000485 simple columnar epithelium UBERON:0000485 Unilaminar epithelium, which consists of a single layer of columnar cells. Examples: ciliated columnar epithelium, gastric epithelium, microvillus columnar epithelium.[FMA]. FMA:FMA Wikipedia:Simple_columnar_epithelium http://orcid.org/0000-0001-9114-8737 columnar epithelium EHDAA2:0003068 columnar epithlium AEO:0000068 Epithelium which consists of more than one layer of epithelial cells that may or may not be in contact with a basement membrane. Examples: keratinized stratified squamous epithelium, ciliated stratified columnar epithelium.[FMA]. AAO:0010059 AEO:0000069 BILA:0000069 BTO:0002074 CARO:0000069 EHDAA2:0003069 FMA:45562 HAO:0000069 NCIT:C33622 SCTID:309044005 TAO:0001494 Wikipedia:Stratified_epithelium XAO:0004006 ZFA:0001494 stratified epithelium uberon laminated epithelium UBERON:0000486 multilaminar epithelium UBERON:0000486 Epithelium which consists of more than one layer of epithelial cells that may or may not be in contact with a basement membrane. Examples: keratinized stratified squamous epithelium, ciliated stratified columnar epithelium.[FMA]. FMA:FMA Wikipedia:Stratified_epithelium http://orcid.org/0000-0001-9114-8737 laminated epithelium BTO:0002074 Unilaminar epithelium which consists of a single layer of squamous cells. Examples: pulmonary alveolar epithelium, endothelium.[FMA]. AAO:0010066 AEO:0000070 BILA:0000070 BTO:0002073 CARO:0000070 EHDAA2:0003070 FMA:45565 HAO:0000070 NCIT:C13178 TAO:0001498 Wikipedia:Simple_squamous_epithelium XAO:0004010 ZFA:0001498 epithelium simplex squamosum uberon UBERON:0000487 simple squamous epithelium UBERON:0000487 Unilaminar epithelium which consists of a single layer of squamous cells. Examples: pulmonary alveolar epithelium, endothelium.[FMA]. FMA:45565 Wikipedia:Simple_squamous_epithelium http://orcid.org/0000-0001-9114-8737 Epithelium that consists of epithelial cells not arranged in one ore more layers. AAO:0010057 AEO:0000071 BILA:0000071 CARO:0000071 EHDAA2:0003071 FMA:61741 HAO:0000071 TAO:0001493 XAO:0004004 ZFA:0001493 heterogenous epithelium uberon UBERON:0000488 atypical epithelium UBERON:0000488 Epithelium that consists of epithelial cells not arranged in one ore more layers. http://orcid.org/0000-0001-9114-8737 Compound organ that contains one or more macroscopic anatomical spaces. AAO:0010016 AEO:0000072 BILA:0000072 CARO:0000072 EHDAA2:0003072 FMA:55671 HAO:0000072 TAO:0001490 TGMA:0001857 VHOG:0001730 XAO:0003165 ZFA:0001490 cavitated organ uberon UBERON:0000489 cavitated compound organ UBERON:0000489 Compound organ that contains one or more macroscopic anatomical spaces. http://orcid.org/0000-0001-9114-8737 cavitated organ FMA:55671 Epithelium which consists of a single layer of epithelial cells. Examples: endothelium, mesothelium, glandular squamous epithelium.[FMA]. AAO:0010062 AEO:0000073 BILA:0000073 BTO:0002073 CARO:0000073 EHDAA2:0003073 FMA:45561 HAO:0000073 NCIT:C33554 SCTID:309043004 TAO:0001495 XAO:0004007 ZFA:0001495 simple epithelium uberon UBERON:0000490 unilaminar epithelium UBERON:0000490 Epithelium which consists of a single layer of epithelial cells. Examples: endothelium, mesothelium, glandular squamous epithelium.[FMA]. FMA:45561 http://orcid.org/0000-0001-9114-8737 simple epithelium FMA:45561 Subdivision of trunk that lies between the head and the abdomen. EMAPA:35862 FMA:259209 MA:0000022 SCTID:302551006 Wikipedia:Thorax thorax uberon anterior subdivision of trunk upper body upper trunk UBERON:0000915 thoracic segment of trunk UBERON:0000915 Subdivision of trunk that lies between the head and the abdomen. http://orcid.org/0000-0002-6601-2165 thorax MA:0000022 upper trunk FMA:259209 The subdivision of the vertebrate body between the thorax and pelvis. The ventral part of the abdomen contains the abdominal cavity and visceral organs. The dorsal part includes the abdominal section of the vertebral column. BTO:0000020 CALOHA:TS-0001 EFO:0000968 EMAPA:35102 EV:0100011 FMA:9577 GAID:16 MA:0000029 MAT:0000298 MESH:D000005 MIAA:0000298 SCTID:302553009 Wikipedia:Abdomen galen:Abdomen abdominopelvic region abdominopelvis uberon adult abdomen belly celiac region UBERON:0000916 abdomen UBERON:0000916 The subdivision of the vertebrate body between the thorax and pelvis. The ventral part of the abdomen contains the abdominal cavity and visceral organs. The dorsal part includes the abdominal section of the vertebral column. http://orcid.org/0000-0002-6601-2165 abdominopelvic region FMA:9577 abdominopelvis FMA:9577 Anatomical entity that comprises the organism in the early stages of growth and differentiation that are characterized by cleavage, the laying down of fundamental tissues, and the formation of primitive organs and organ systems. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant. AAO:0011035 AEO:0000169 BILA:0000056 BSA:0000039 BTO:0000379 CALOHA:TS-0229 EFO:0001367 EHDAA2:0000002 EHDAA2_RETIRED:0003236 EHDAA:38 EMAPA:16039 FMA:69068 GAID:963 MAT:0000226 MESH:D004622 MIAA:0000019 NCIT:C28147 OGEM:000001 SCTID:57991002 VHOG:0001766 Wikipedia:Embryo XAO:0000113 ZFA:0000103 http://neurolex.org/wiki/Category:Embryonic_organism embryonic organism uberon developing organism developmental tissue UBERON:0000922 embryo UBERON:0000922 Anatomical entity that comprises the organism in the early stages of growth and differentiation that are characterized by cleavage, the laying down of fundamental tissues, and the formation of primitive organs and organ systems. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant. BTO:0000379 FB:FBrf0039741 FB:FBrf0041814 GO:0009790 Wikipedia:Embryo embryonic organism BILA:0000056 developing organism BILA:0000056 A layer of cells produced during the process of gastrulation during the early development of the animal embryo, which is distinct from other such layers of cells, as an early step of cell differentiation. The three types of germ layers are the endoderm, ectoderm, and mesoderm. embryonic tissue AAO:0000480 BILA:0000035 BTO:0000556 EMAPA:36033 FMA:69069 GAID:1303 MESH:D005855 NCIT:C12950 NCIT:C54105 TAO:0001122 VHOG:0001223 Wikipedia:Germ_layer XAO:0003011 ZFA:0001122 germinal layer primary germ layer uberon embryonic germ layer embryonic germ layers UBERON:0000923 Classically the germ layers are ectoderm, mesoderm and endoderm. Alternatively: primary = ectoderm, endoderm; secondary=mesoderm; tertiary=dorsal mesoderm, NC[https://github.com/obophenotype/uberon/wiki/The-neural-crest] germ layer UBERON:0000923 A layer of cells produced during the process of gastrulation during the early development of the animal embryo, which is distinct from other such layers of cells, as an early step of cell differentiation. The three types of germ layers are the endoderm, ectoderm, and mesoderm. Wikipedia:Germ_layer https://github.com/obophenotype/uberon/issues/203 embryonic tissue FMA:69069 germinal layer ncithesaurus:Germinal_Layer primary germ layer GO:0001704 ZFA:0001122 Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue. AAO:0000137 BILA:0000036 BTO:0000315 CALOHA:TS-0216 EFO:0000414 EHDAA2:0000428 EMAPA:16069 EV:0100003 FMA:69070 GAID:1304 MAT:0000155 MAT:0000173 MESH:D004475 MIAA:0000173 NCIT:C12703 SCTID:362851007 TAO:0000016 VHOG:0000153 Wikipedia:Ectoderm XAO:0000001 ZFA:0000016 embryonic ectoderm uberon UBERON:0000924 ectoderm UBERON:0000924 Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue. Wikipedia:Ectoderm embryonic ectoderm VHOG:0000153 Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut. AAO:0000139 BILA:0000038 BTO:0000800 CALOHA:TS-0273 EFO:0002545 EHDAA2:0000436 EMAPA:16062 EV:0100005 FMA:69071 GAID:1305 MAT:0000175 MESH:D004707 MIAA:0000175 NCIT:C12706 SCTID:362855003 TAO:0000017 VHOG:0000154 Wikipedia:Endoderm XAO:0000090 ZFA:0000017 uberon UBERON:0000925 endoderm UBERON:0000925 Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut. Wikipedia:Endoderm The middle germ layer of the embryo, between the endoderm and ectoderm. UBERON:0003263 AAO:0000304 BILA:0000037 BTO:0000839 CALOHA:TS-0623 EFO:0001981 EHDAA2:0001128 EHDAA:124 EHDAA:160 EHDAA:183 EMAPA:16083 EV:0100006 FMA:69072 GAID:522 MAT:0000174 MESH:D008648 MIAA:0000174 NCIT:C12750 SCTID:362854004 TAO:0000041 VHOG:0000152 Wikipedia:Mesoderm XAO:0000050 ZFA:0000041 uberon embryonic mesoderm entire mesoderm mesodermal mantle UBERON:0000926 mesoderm UBERON:0000926 The middle germ layer of the embryo, between the endoderm and ectoderm. Wikipedia:Mesoderm embryonic mesoderm VHOG:0000152 entire mesoderm SCTID:362854004 https://orcid.org/0000-0002-6601-2165 Anterior part of the embryonic digestive tract that develops into a mouth. The stomodeum includes as parts an invagination of the ectoderm and the stomodeal cavity. stomodeal-hypophyseal primordium BTO:0004224 EHDAA2:0001929 EMAPA:16263 FMA:295846 NCIT:C34306 TAO:0001290 TGMA:0000135 Wikipedia:Stomodeum XAO:0000269 ZFA:0001290 mouth primordium primitive oral cavity stomatodeum stomodaeum uberon mouth pit oral ectoderm oral pit UBERON:0000930 stomodeum UBERON:0000930 Anterior part of the embryonic digestive tract that develops into a mouth. The stomodeum includes as parts an invagination of the ectoderm and the stomodeal cavity. Wikipedia:Stomodeum http://orcid.org/0000-0002-6601-2165 https://github.com/obophenotype/uberon/issues/326 stomodeal-hypophyseal primordium XAO:0000269 mouth primordium XAO:0000269 primitive oral cavity https://orcid.org/0000-0002-6601-2165 stomatodeum Wikipedia:Stomodeum mouth pit EMAPA:16263 oral ectoderm ZFA:0001290 ZFIN:ZDB-PUB-100726-23 oral pit EMAPA:16263 An expanded region of the vertebrate alimentary tract that serves as a food storage compartment and digestive organ. A stomach is lined, in whole or in part by a glandular epithelium. AAO:0000579 ANISEED:1235297 BTO:0001307 CALOHA:TS-0980 EFO:0000837 EHDAA2:0001915 EHDAA:2993 EMAPA:17021 EV:0100070 FMA:7148 GAID:293 MA:0000353 MAT:0000051 MESH:D013270 MIAA:0000051 NCIT:C12391 SCTID:181246003 TAO:0002121 VHOG:0000408 Wikipedia:Stomach XAO:0000128 galen:Stomach stomach chamber uberon anterior intestine gaster mesenteron UBERON:0000945 stomach UBERON:0000945 An expanded region of the vertebrate alimentary tract that serves as a food storage compartment and digestive organ. A stomach is lined, in whole or in part by a glandular epithelium. ISBN:0073040584 Wikipedia:Stomach https://orcid.org/0000-0002-6601-2165 gaster BTO:0001307 The main trunk of the systemic arterial system that carries blood from the heart to all the organs and other structures of the body, bringing oxygenated blood to all parts of the body in the systemic circulation. AAO:0010213 BTO:0000135 CALOHA:TS-0046 EFO:0000265 EMAPA:18601 EV:0100027 FMA:3734 GAID:469 MA:0000062 MAT:0000035 MESH:D001011 MIAA:0000035 NCIT:C12669 SCTID:181298001 VHOG:0001523 Wikipedia:Aorta XAO:0003010 galen:Aorta trunk of aortic tree trunk of systemic arterial tree uberon UBERON:0000947 aorta UBERON:0000947 The main trunk of the systemic arterial system that carries blood from the heart to all the organs and other structures of the body, bringing oxygenated blood to all parts of the body in the systemic circulation. ISBN:0-683-40008-8 MESH:A07.231.114.056 MP:0000272 Wikipedia:Aorta http://orcid.org/0000-0002-6601-2165 A myogenic muscular circulatory organ found in the vertebrate cardiovascular system composed of chambers of cardiac muscle. It is the primary circulatory organ. AAO:0010210 BILA:0000020 BTO:0000562 CALOHA:TS-0445 EFO:0000815 EHDAA2:0000738 EHDAA:420 EMAPA:16105 EV:0100018 FMA:7088 GAID:174 MA:0000072 MAT:0000036 MESH:D006321 MIAA:0000036 NCIT:C12727 SCTID:302509004 TAO:0000114 VHOG:0000276 Wikipedia:Heart XAO:0000064 ZFA:0000114 galen:Heart chambered heart vertebrate heart uberon cardium UBERON:0000948 Taxon notes:" the ascidian tube-like heart lacks chambers....The ascidian heart is formed after metamorphosis as a simple tube-like structure with a single-layered myoepithelium that is continuous with a single-layered pericar- dial wall. It lacks chambers and endocardium.... The innovation of the chambered heart was a key event in vertebrate evolution, because the chambered heart generates one-way blood flow with high pressure, a critical requirement for the efficient blood supply of large-body vertebrates... all extant vertebrates have hearts with two or more chambers (Moorman and Christoffels 2003)" DOI:10.1101/gad.1485706 heart UBERON:0000948 A myogenic muscular circulatory organ found in the vertebrate cardiovascular system composed of chambers of cardiac muscle. It is the primary circulatory organ. Wikipedia:Heart http://orcid.org/0000-0002-6601-2165 chambered heart https://orcid.org/0000-0002-6601-2165 cardium EMAPA:16105 Anatomical system that consists of the glands and parts of glands that produce endocrine secretions and help to integrate and control bodily metabolic activity. AAO:0010279 CALOHA:TS-1301 EFO:0002969 EHDAA2:0002224 EMAPA:35306 EV:0100128 FMA:9668 GAID:439 MA:0000012 MESH:D004703 NCIT:C12705 SCTID:278876000 TAO:0001158 VHOG:0000098 Wikipedia:Endocrine_system XAO:0000158 ZFA:0001158 endocrine glandular system endocrine system systema endocrinum uberon UBERON:0000949 endocrine system UBERON:0000949 Anatomical system that consists of the glands and parts of glands that produce endocrine secretions and help to integrate and control bodily metabolic activity. NLM:endocrine+system Wikipedia:Endocrine_system endocrine glandular system EHDAA2:0002224 The brain is the center of the nervous system in all vertebrate, and most invertebrate, animals. Some primitive animals such as jellyfish and starfish have a decentralized nervous system without a brain, while sponges lack any nervous system at all. In vertebrates, the brain is located in the head, protected by the skull and close to the primary sensory apparatus of vision, hearing, balance, taste, and smell[WP]. AAO:0010478 ABA:Brain BAMS:Br BAMS:Brain BILA:0000135 BIRNLEX:796 BTO:0000142 CALOHA:TS-0095 DHBA:10155 EFO:0000302 EHDAA2:0000183 EHDAA:2641 EHDAA:6485 EMAPA:16894 EV:0100164 FMA:50801 GAID:571 HBA:4005 MA:0000168 MAT:0000098 MBA:8 MBA:997 MESH:D001921 MIAA:0000098 NCIT:C12439 PBA:3999 SCTID:258335003 TAO:0000008 VHOG:0000157 Wikipedia:Brain XAO:0000010 ZFA:0000008 galen:Brain uberon encephalon suprasegmental levels of nervous system suprasegmental structures synganglion the brain UBERON:0000955 brain UBERON:0000955 The brain is the center of the nervous system in all vertebrate, and most invertebrate, animals. Some primitive animals such as jellyfish and starfish have a decentralized nervous system without a brain, while sponges lack any nervous system at all. In vertebrates, the brain is located in the head, protected by the skull and close to the primary sensory apparatus of vision, hearing, balance, taste, and smell[WP]. Wikipedia:Brain https://github.com/obophenotype/uberon/issues/300 encephalon BTO:0000142 suprasegmental levels of nervous system NeuroNames:21 suprasegmental structures NeuroNames:21 the brain NeuroNames:21 The thin layer of gray matter on the surface of the cerebral hemisphere that develops from the telencephalon. It consists of the neocortex (6 layered cortex or isocortex), the hippocampal formation and the olfactory cortex. BAMS:C BAMS:CTX BAMS:Cerebral_cortex BAMS:Cx BIRNLEX:1494 BM:Tel-Cx BTO:0000233 CALOHA:TS-0091 DHBA:10159 EFO:0000328 EHDAA2:0000234 EHDAA:5464 EMAPA:17544 EV:0100166 FMA:61830 GAID:629 HBA:4008 MA:0000185 MAT:0000108 MBA:688 MESH:D002540 MIAA:0000108 NCIT:C12443 PBA:128011354 SCTID:362880003 VHOG:0000722 Wikipedia:Cerebral_cortex cortex of cerebral hemisphere uberon brain cortex cortical plate (CTXpl) cortical plate (areas) pallium of the brain UBERON:0000956 cerebral cortex UBERON:0000956 The thin layer of gray matter on the surface of the cerebral hemisphere that develops from the telencephalon. It consists of the neocortex (6 layered cortex or isocortex), the hippocampal formation and the olfactory cortex. BIRNLEX:1494 cortex of cerebral hemisphere BTO:0000233 FMA:61830 brain cortex BTO:0000233 cortical plate (CTXpl) NeuroNames:39 cortical plate (areas) NeuroNames:39 pallium of the brain BTO:0000233 Any thin layer or plate. Wikipedia:Lamina_of_the_vertebral_arch laminar tissue uberon UBERON:0000957 lamina UBERON:0000957 Any thin layer or plate. Wikipedia:Lamina_of_the_vertebral_arch The cervical nerves are the spinal nerves from the cervical vertebrae. Although there are seven cervical vertebrae (C1-C7), there are eight cervical nerves (C1-C8). All nerves except C8 emerge above their corresponding vertebrae, while the C8 nerve emerges below the C7 vertebra. (In the other portions of the spine, the nerve emerges below the vertebra with the same name. Dorsal (posterior) distribution includes the greater occipital (C2) and third occipital (C3). Ventral (anterior) distribution includes the cervical plexus (C1-C4) and brachial plexus (C5-C8) [WP,unvetted]. BAMS:cern FMA:5859 NCIT:C32299 NLXANAT:20090207 SCTID:360497008 Wikipedia:Cervical_nerves neuronames:2351 cervical nerve cervical nerve tree cervical spinal nerve uberon UBERON:0000962 Innervates: sternohyoid muscle, sternothyroid muscle, omohyoid muscle[WP] nerve of cervical vertebra UBERON:0000962 The cervical nerves are the spinal nerves from the cervical vertebrae. Although there are seven cervical vertebrae (C1-C7), there are eight cervical nerves (C1-C8). All nerves except C8 emerge above their corresponding vertebrae, while the C8 nerve emerges below the C7 vertebra. (In the other portions of the spine, the nerve emerges below the vertebra with the same name. Dorsal (posterior) distribution includes the greater occipital (C2) and third occipital (C3). Ventral (anterior) distribution includes the cervical plexus (C1-C4) and brachial plexus (C5-C8) [WP,unvetted]. Wikipedia:Cervical_nerves cervical nerve FMA:5859 MAT:0000204 MIAA:0000204 uberon UBERON:0000963 head sensillum UBERON:0000963 The transparent anterior portion of the fibrous coat of the eye that serves as the chief refractory structure. AAO:0010344 BTO:0000286 CALOHA:TS-0171 EFO:0000377 EHDAA2:0000316 EHDAA:10199 EMAPA:17161 EV:0100341 FMA:58238 GAID:892 MA:0000266 MESH:D003315 NCIT:C12342 SCTID:181162001 TAO:0000640 VHOG:0000164 Wikipedia:Cornea XAO:0000180 ZFA:0000640 cornea of camera-type eye uberon tunica cornea UBERON:0000964 cornea UBERON:0000964 The transparent anterior portion of the fibrous coat of the eye that serves as the chief refractory structure. ISBN:0-683-40008-8 MESH:A09.371.060.217 MP:0001312 cornea of camera-type eye GO:0061303 A transparent and refractive lens located posterior to the iris. The lens of camera-type eye refracts light to be focused on the retina. AAO:0010348 BTO:0000723 CALOHA:TS-0545 EHDAA:9057 EMAPA:17838 EV:0100343 FMA:58241 MA:0000275 MAT:0000141 MESH:D007908 MIAA:0000141 NCIT:C12743 RETIRED_EHDAA2:0000975 SCTID:181169005 TAO:0000035 VHOG:0000169 Wikipedia:Lens_(anatomy) XAO:0000008 ZFA:0000035 camera-type eye lens lens crystallina uberon crystalline lens ocular lens UBERON:0000965 The lens is avascular and nourished by diffusion from the aqueous and vitreous humors. lens of camera-type eye UBERON:0000965 A transparent and refractive lens located posterior to the iris. The lens of camera-type eye refracts light to be focused on the retina. Wikipedia:Lens_(anatomy) http://orcid.org/0000-0002-6601-2165 camera-type eye lens GO:0002088 lens crystallina Wikipedia:Lens_(anatomy) crystalline lens BTO:0000723 PMID:36055924 ocular lens BTO:0000723 The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. AAO:0010352 BAMS:R BIRNLEX:1153 BTO:0001175 CALOHA:TS-0865 EFO:0000832 EHDAA2:0001627 EHDAA:4757 EMAPA:17168 EV:0100348 FMA:58301 GAID:755 MA:0000276 MAT:0000142 MBA:304325711 MESH:D012160 MIAA:0000142 NCIT:C12343 NIFSTD_RETIRED:birnlex_1156 SCTID:181171005 TAO:0000152 VHOG:0000229 Wikipedia:Retina XAO:0000009 ZFA:0000152 neuronames:1862 inner layer of eyeball retina of camera-type eye tunica interna of eyeball uberon Netzhaut UBERON:0000966 Currently this class encompasses only verteberate AOs but could in theory also include cephalopod - we may want to make a more specific class for vertebrate retina. note that this class excludes ommatidial retinas, as the retina must be part of an eyeball. Use the parent class photoreceptor array / light-sensitive tissue for arthropods retina UBERON:0000966 The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. Wikipedia:Retina ZFIN:curator retina of camera-type eye GO:0060041 Netzhaut BTO:0001175 An organ that detects light. BILA:0000017 BTO:0000439 CALOHA:TS-0309 EFO:0000827 EV:0100336 GAID:69 MAT:0000140 MESH:D005123 MIAA:0000140 Wikipedia:Eye uberon light-detecting organ visual apparatus UBERON:0000970 eye UBERON:0000970 An organ that detects light. https://orcid.org/0000-0002-6601-2165 visual apparatus EV:0100336 The smallest morphological and functional unit of the compound eye that consists of a usually limited and often constant number of rhabdomeric photoreceptor cells, cornea-secreting epithelial cells, and interommatidial pigment cells, and may additionally contain crystalline cone cells. BTO:0001922 HAO:0000666 MAT:0000143 MIAA:0000143 Wikipedia:Ommatidium omatidium uberon UBERON:0000971 ommatidium UBERON:0000971 The smallest morphological and functional unit of the compound eye that consists of a usually limited and often constant number of rhabdomeric photoreceptor cells, cornea-secreting epithelial cells, and interommatidial pigment cells, and may additionally contain crystalline cone cells. PMID:21062451 An organism subdivision that extends from the head to the pectoral girdle, encompassing the cervical vertebral column. AEO:0000108 BTO:0000420 CALOHA:TS-2045 EFO:0000967 EHDAA2:0003108 EMAPA:35587 FMA:7155 GAID:86 MA:0000024 MAT:0000297 MESH:D009333 MIAA:0000297 NCIT:C13063 SCTID:302550007 Wikipedia:Neck galen:Neck uberon neck (volume) UBERON:0000974 neck UBERON:0000974 An organism subdivision that extends from the head to the pectoral girdle, encompassing the cervical vertebral column. http://orcid.org/0000-0002-6601-2165 neck (volume) FMA:7155 The invaginated serous membrane that surrounds the lungs (the visceral portion) and lines the walls of the pleural cavity (parietal portion). BTO:0001791 CALOHA:TS-2081 EFO:0001980 EV:0100044 FMA:9583 GAID:360 MA:0000433 MESH:D010994 NCIT:C12469 SCTID:181609007 VHOG:0000394 Wikipedia:Pleura wall of pleural sac uberon pleura pleural tissue UBERON:0000977 pleura UBERON:0000977 The invaginated serous membrane that surrounds the lungs (the visceral portion) and lines the walls of the pleural cavity (parietal portion). ISBN:0-683-40008-8 MP:0010820 UBERON:cjm Wikipedia:Pulmonary_pleurae https://github.com/obophenotype/uberon/issues/1231 pleural tissue BTO:0001791 NCIT:C12469 Anatomical structure that consists of two or more adjacent skeletal structures, which may be interconnected by various types of tissue[VSAO]. articulation joint AEO:0000182 BTO:0001686 CALOHA:TS-2023 EFO:0000948 EMAPA:35456 FMA:7490 GAID:102 MA:0000319 MAT:0000188 MESH:D007596 MIAA:0000188 NCIT:C13044 RETIRED_EHDAA2:0003182 SCTID:302536002 TAO:0000367 VHOG:0001276 VSAO:0000101 Wikipedia:Joint XAO:0000171 ZFA:0001596 galen:Joint uberon articular joint UBERON:0000982 skeletal joint UBERON:0000982 Anatomical structure that consists of two or more adjacent skeletal structures, which may be interconnected by various types of tissue[VSAO]. GO_REF:0000034 VSAO:0000101 Wikipedia:Joint http://dx.plos.org/10.1371/journal.pone.0051070 articulation VSAO:0000101 joint FMA:7490 VSAO:0000101 articular joint BTO:0001686 The part of the central nervous system lying between the medulla oblongata and the midbrain, ventral to the cerebellum. BAMS:PONS BAMS:Pons BIRNLEX:733 BM:Pons BTO:0001101 CALOHA:TS-0813 DHBA:10661 EFO:0001394 EHDAA2:0004394 EMAPA:17563 EV:0100253 FMA:67943 GAID:578 HBA:9131 MA:0000204 MAT:0000115 MBA:771 MESH:D011149 MIAA:0000115 NCIT:C12511 SCTID:279103004 VHOG:0001176 Wikipedia:Pons pons Varolii pons of Varolius uberon UBERON:0000988 pons UBERON:0000988 The part of the central nervous system lying between the medulla oblongata and the midbrain, ventral to the cerebellum. VHOG:0001176 pons Varolii ncithesaurus:Pons_Varolii Anatomical system that has as its parts the organs concerned with reproduction. 2022-06-10T18:22:34Z AAO:0010258 BILA:0000103 BTO:0000081 CALOHA:TS-1318 EFO:0000809 EHDAA2:0001603 EHDAA:5923 EMAPA:17381 EV:0100100 FMA:7160 GAID:363 HAO:0000374 HAO:0000895 MA:0000326 MIAA:0000305 NCIT:C12841 SCTID:278875001 TAO:0000632 VHOG:0000182 WBbt:0005747 Wikipedia:Reproductive_system XAO:0000142 ZFA:0000632 genital system uberon Geschlechtsorgan animal reproductive system genital tract organa genitalia reproductive tissue reproductive tract UBERON:0000990 reproductive system UBERON:0000990 Anatomical system that has as its parts the organs concerned with reproduction. Wikipedia:Reproductive_system Geschlechtsorgan BTO:0000081 animal reproductive system BTO:0000081 organa genitalia BTO:0000081 reproductive tissue BTO:0000081 Reproductive organ that produces and releases eggs (ovary) or sperm (testis). AAO:0000213 BILA:0000123 BSA:0000079 BTO:0000534 EMAPA:17383 FMA:18250 GAID:368 HAO:0000379 MA:0002420 MESH:D006066 NCIT:C12725 SCTID:304623008 TAO:0000413 VHOG:0000397 WBbt:0005175 Wikipedia:Gonad XAO:0003146 ZFA:0000413 gonada uberon UBERON:0000991 gonad UBERON:0000991 Reproductive organ that produces and releases eggs (ovary) or sperm (testis). ISBN:0140512888 Wikipedia:Gonad ZFA:0000413 ZFIN:curator The gonad of a female organism which contains germ cells. AAO:0000371 BILA:0000125 BSA:0000080 BTO:0000975 CALOHA:TS-0730 EFO:0000973 EHDAA2:0001360 EHDAA:8124 EMAPA:17962 EV:0100111 FMA:7209 GAID:367 MA:0000384 MESH:D010053 MIAA:0000125 NCIT:C12404 SCTID:181464007 TAO:0000403 VHOG:0000251 Wikipedia:Ovary XAO:0000258 ZFA:0000403 animal ovary female gonad female organism genitalia gonad female organism genitalia gonada female organism reproductive system gonad female organism reproductive system gonada female reproductive system gonad female reproductive system gonada genitalia of female organism gonad genitalia of female organism gonada gonad of female organism genitalia gonad of female organism reproductive system gonad of female reproductive system gonad of genitalia of female organism gonad of reproductive system of female organism gonada of female organism genitalia gonada of female organism reproductive system gonada of female reproductive system gonada of genitalia of female organism gonada of reproductive system of female organism reproductive system of female organism gonad reproductive system of female organism gonada uberon UBERON:0000992 ovary UBERON:0000992 The gonad of a female organism which contains germ cells. ISBN:0-683-40008-8 MP:0001126 Wikipedia:Ovary animal ovary EFO:0000973 female organism genitalia gonad OBOL:automatic female organism genitalia gonada OBOL:automatic female organism reproductive system gonad OBOL:automatic female organism reproductive system gonada OBOL:automatic female reproductive system gonad OBOL:automatic female reproductive system gonada OBOL:automatic genitalia of female organism gonad OBOL:automatic genitalia of female organism gonada OBOL:automatic gonad of female organism genitalia OBOL:automatic gonad of female organism reproductive system OBOL:automatic gonad of female reproductive system OBOL:automatic gonad of genitalia of female organism OBOL:automatic gonad of reproductive system of female organism OBOL:automatic gonada of female organism genitalia OBOL:automatic gonada of female organism reproductive system OBOL:automatic gonada of female reproductive system OBOL:automatic gonada of genitalia of female organism OBOL:automatic gonada of reproductive system of female organism OBOL:automatic reproductive system of female organism gonad OBOL:automatic reproductive system of female organism gonada OBOL:automatic The outer epithelial layer of the skin that is superficial to the dermis. epidermis skin AAO:0000143 BTO:0000404 CALOHA:TS-0283 EFO:0000954 EMAPA:17528 EV:0100153 FMA:70596 GAID:932 MA:0000153 MAT:0000154 MESH:D004817 MIAA:0000154 NCIT:C12708 SCTID:361694003 TAO:0000105 VHOG:0000077 Wikipedia:Epidermis_(skin) XAO:0000028 ZFA:0000105 vertebrate epidermis uberon UBERON:0001003 skin epidermis UBERON:0001003 The outer epithelial layer of the skin that is superficial to the dermis. ISBN:0073040584 http://orcid.org/0000-0002-6601-2165 Functional system which consists of structures involved in respiration. AAO:0000541 BTO:0000203 CALOHA:TS-1319 EFO:0000804 EHDAA2:0001604 EHDAA:2203 EMAPA:16727 EV:0100036 FMA:7158 GAID:78 MA:0000327 MAT:0000030 MESH:D012137 MIAA:0000030 NCIT:C12779 SCTID:278197002 TAO:0000272 VHOG:0000202 Wikipedia:Respiratory_system XAO:0000117 ZFA:0000272 apparatus respiratorius respiratory system uberon Atmungssystem apparatus respiratorius UBERON:0001004 respiratory system UBERON:0001004 Functional system which consists of structures involved in respiration. Wikipedia:Respiratory_system http://orcid.org/0000-0002-6601-2165 Atmungssystem BTO:0000203 apparatus respiratorius BTO:0000203 An airway through which respiratory air passes in organisms. airway SCTID:361380005 Wikipedia:Trachea uberon UBERON:0001005 respiratory airway UBERON:0001005 An airway through which respiratory air passes in organisms. Wikipedia:Trachea airway http://orcid.org/0000-0002-6601-2165 Anatomical system that has as its parts the organs devoted to the ingestion, digestion, and assimilation of food and the discharge of residual wastes. AAO:0000129 BILA:0000082 BTO:0000058 CALOHA:TS-1293 EFO:0000793 FMA:7152 GAID:278 MA:0002431 MAT:0000018 MESH:D004064 MIAA:0000018 SCTID:278859004 TADS:0000170 TAO:0000339 WBbt:0005748 Wikipedia:Digestive_system XAO:0000125 ZFA:0000339 galen:DigestiveSystem ncithesaurus:Digestive_System uberon alimentary system alimentary tract gastrointestinal system gut UBERON:0001007 digestive system UBERON:0001007 Anatomical system that has as its parts the organs devoted to the ingestion, digestion, and assimilation of food and the discharge of residual wastes. FB:gg NLM:alimentary+system Wikipedia:Digestive_system Organ system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells, etc. to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis[WP]. AAO:0000959 CALOHA:TS-2103 VHOG:0001248 Wikipedia:Circulatory_system uberon UBERON:0001009 circulatory system UBERON:0001009 Organ system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells, etc. to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis[WP]. Wikipedia:Circulatory_system Portion of connective tissue composed of adipocytes enmeshed in areolar tissue. AAO:0000001 AEO:000020 BTO:0001487 CALOHA:TS-0013 EFO:0000790 EHDAA2:0003120 EMAPA:35112 EV:0100381 FMA:20110 GAID:920 MA:0000009 MAT:0000015 MESH:D000273 MIAA:0000015 NCIT:C12472 SCTID:55603005 TAO:0002134 VHOG:0001284 Wikipedia:Adipose_tissue XAO:0003049 ZFA:0005345 galen:FattyTissue fat fat tissue fatty tissue uberon adipose bodyfat fatty depot UBERON:0001013 adipose tissue UBERON:0001013 Portion of connective tissue composed of adipocytes enmeshed in areolar tissue. MESH:A10.165.114 MGI:cwg MP:0000003 Wikipedia:Adipose_tissue http://orcid.org/0000-0002-6601-2165 fat MA:0000009 adipose BTO:0001487 bodyfat BTO:0001487 A subdivision of the muscular system corresponding to a subdisivision of an organism. BTO:0000887 EFO:0001949 EMAPA:35577 FMA:32558 MA:0000165 NCIT:C13056 TAO:0000548 VSAO:0005038 WBbt:0005737 Wikipedia:Muscular_system ZFA:0000548 muscle group muscles set musculature set of muscles set of skeletal muscles uberon muscle system muscles musculature system UBERON:0001015 musculature UBERON:0001015 A subdivision of the muscular system corresponding to a subdisivision of an organism. Wikipedia:Muscular_system https://orcid.org/0000-0002-6601-2165 set of muscles FMA:32558 set of skeletal muscles MA:0000165 The nervous system is an organ system containing predominantly neuron and glial cells. In bilaterally symmetrical organism, it is arranged in a network of tree-like structures connected to a central body. The main functions of the nervous system are to regulate and control body functions, and to receive sensory input, process this information, and generate behavior [CUMBO]. AAO:0000324 BILA:0000079 BIRNLEX:844 BTO:0001484 CALOHA:TS-1313 EFO:0000802 EHDAA2:0001246 EHDAA:826 EMAPA:16469 EV:0100162 FMA:7157 GAID:466 MA:0000016 MAT:0000026 MESH:D009420 MIAA:0000026 NCIT:C12755 SCTID:278196006 TAO:0000396 VHOG:0000402 WBbt:0005735 Wikipedia:Nervous_system XAO:0000177 ZFA:0000396 neuronames:3236 neurological system nerve net uberon UBERON:0001016 nervous system UBERON:0001016 The nervous system is an organ system containing predominantly neuron and glial cells. In bilaterally symmetrical organism, it is arranged in a network of tree-like structures connected to a central body. The main functions of the nervous system are to regulate and control body functions, and to receive sensory input, process this information, and generate behavior [CUMBO]. BIRNLEX:844 ISBN:0-14-051288-8 ISBN:3110148986 NLM:nervous+system WB:rynl Wikipedia:Nervous_system ZFIN:curator neurological system GO:0050877 nerve net Wikipedia:Nerve_net The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord. AAO:0000090 BAMS:CNS BILA:0000080 BIRNLEX:1099 BTO:0000227 CALOHA:TS-0150 EFO:0000908 EHDAA2:0000225 EHDAA:828 EMAPA:16470 EMAPA:16754 EV:0100163 FMA:55675 GAID:570 MA:0000167 MAT:0000457 MESH:D002490 NCIT:C12438 SCTID:278199004 TAO:0000012 VHOG:0000293 Wikipedia:Central_nervous_system XAO:0000215 ZFA:0000012 neuronames:854 cerebrospinal axis uberon neuraxis UBERON:0001017 central nervous system UBERON:0001017 The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord. GO:0021551 http://www.frontiersinzoology.com/content/7/1/29 https://sourceforge.net/p/geneontology/ontology-requests/11422/ cerebrospinal axis FMA:55675 neuraxis FMA:55675 A slender neuron projection bundle[FBbt]; A bundle of anatomical fibers, as of muscle or nerve (American Heritage Dictionary 4th ed). fascicle BIRNLEX:872 BTO:0002191 EMAPA:36605 FMA:12235 NCIT:C32586 TGMA:0000088 Wikipedia:Nervous_system_fascicle nerve bundle nerve fasciculus neural fasciculus uberon nerve fiber tract UBERON:0001019 EDITOR_NOTE note FBbt class not disjoint from tract. Consider merging with 'neuron projection bundle' nerve fasciculus UBERON:0001019 A slender neuron projection bundle[FBbt]; A bundle of anatomical fibers, as of muscle or nerve (American Heritage Dictionary 4th ed). BIRNLEX:872 FBbt:00005101 fascicle FBbt:00005101 nerve bundle FMA:12235 nerve fasciculus FMA:12235 neural fasciculus FMA:12235 nerve fiber tract BTO:0002191 An enclosed, cable-like bundle of axons in the peripheral nervous system originating in a nerve root in the central nervous system (or a condensed nervous structure) connecting with peripheral structures. AAO:0011070 AEO:0000137 BAMS:n BIRNLEX:1615 BSA:0000098 BTO:0000925 BTO:0001027 CALOHA:TS-0772 EHDAA2:0003137 EHDAA:2851 EHDAA:3776 EHDAA:4657 EMAPA:32808 EMAPA:32815 EV:0100371 FMA:65132 FMA:65239 GAID:747 GAID:758 MA:0000217 MA:0000228 MESH:D010525 NCIT:C12466 NCIT:C12768 NLX:147826 SCTID:244457007 SCTID:256864008 TAO:0007009 VHOG:0000901 Wikipedia:Nervous_system XAO:0000204 XAO:0003047 ZFA:0007009 galen:Nerve peripheral nerve uberon neural subtree UBERON:0001021 nerve UBERON:0001021 An enclosed, cable-like bundle of axons in the peripheral nervous system originating in a nerve root in the central nervous system (or a condensed nervous structure) connecting with peripheral structures. FBbt:00005105 http://orcid.org/0000-0002-6601-2165 peripheral nerve http://orcid.org/0000-0002-6601-2165 neural subtree FMA:65132 A nerve that transmits from sensory receptors on the surface of the body to the central nervous system. AEO:0000201 EHDAA2:0003200 FMA:5868 Wikipedia:Sensory_nerve uberon afferent nerve UBERON:0001027 sensory nerve UBERON:0001027 A nerve that transmits from sensory receptors on the surface of the body to the central nervous system. UBERON:cjm Wikipedia:Sensory_nerve Anatomical system that overlaps the nervous system and is responsible for receiving and processing sensory information. AAO:0000555 BAMS:SEN BILA:0000099 EFO:0000805 EHDAA2:0003094 EMAPA:16192 FMA:75259 MA:0002442 MAT:0000031 MIAA:0000031 NLXANAT:090816 TAO:0000282 VHOG:0001674 Wikipedia:Sensory_system XAO:0003194 ZFA:0000282 sense organ subsystem sense organs sense organs set sensory subsystem uberon sensory organ system set of sense organs UBERON:0001032 sensory system UBERON:0001032 Anatomical system that overlaps the nervous system and is responsible for receiving and processing sensory information. Wikipedia:Sensory_system sense organs FMA:75259 sense organs set FMA:75259 set of sense organs FMA:75259 The sensory system for the sense of taste. AAO:0010577 BILA:0000143 EFO:0000830 FMA:7194 MA:0002446 MAT:0000275 MIAA:0000275 NLXANAT:090803 SCTID:423940004 TAO:0001101 Wikipedia:Gustatory_system XAO:0003197 ZFA:0001101 neuronames:2889 gustatory organ system taste system uberon UBERON:0001033 gustatory system UBERON:0001033 The sensory system for the sense of taste. NLXANAT:090803 A sac-like expansion of the ventral wall of the intestine, narrowed into a yolk stalk near the body[Hyman's]. Membranous sac attached to an embryo, providing early nourishment in the form of yolk in bony fishes, sharks, reptiles, birds, and primitive mammals. It functions as the developmental circulatory system of the human embryo, before internal circulation begins. In the mouse, the yolk sac is the first site of blood formation, generating primitive macrophages and erythrocytes[WP]. BTO:0001471 CALOHA:TS-1130 EFO:0003078 EHDAA2:0002212 EHDAA:164 EMAPA:16085 FMA:87180 GAID:1301 MESH:D015017 NCIT:C14128 SCTID:362845002 VHOG:0000830 Wikipedia:Yolk_sac uberon UBERON:0001040 yolk sac UBERON:0001040 A sac-like expansion of the ventral wall of the intestine, narrowed into a yolk stalk near the body[Hyman's]. Membranous sac attached to an embryo, providing early nourishment in the form of yolk in bony fishes, sharks, reptiles, birds, and primitive mammals. It functions as the developmental circulatory system of the human embryo, before internal circulation begins. In the mouse, the yolk sac is the first site of blood formation, generating primitive macrophages and erythrocytes[WP]. Wikipedia:Yolk_sac Anterior subdivision of a digestive tract. AAO:0011042 BILA:0000085 BTO:0000507 EHDAA2:0000557 EHDAA:520 EMAPA:16548 FMA:45616 MA:0001526 NCIT:C34180 SCTID:361409009 TGMA:0001014 VHOG:0000285 Wikipedia:Foregut XAO:0000232 uberon UBERON:0001041 foregut UBERON:0001041 Anterior subdivision of a digestive tract. http://orcid.org/0000-0002-6601-2165 A portion of the respiratory and digestive tracts; its distal limit is the superior part of the esophagus and it connects the nasal and oral cavities with the esophagus and larynx; it contains the valleculae and the pyriform recesses; its upper limits are the nasal cavity and cranial base.[FEED]. AAO:0000967 BTO:0001049 CALOHA:TS-0785 EFO:0000836 EHDAA2:0001458 EHDAA:2947 EMAPA:16706 EV:0100065 FMA:46688 GAID:155 MA:0000432 MESH:D010614 NCIT:C12425 SCTID:181211006 TAO:0000056 VHOG:0000462 Wikipedia:Pharynx XAO:0003227 ZFA:0000056 galen:Pharynx uberon UBERON:0001042 Consider generalizing to deuterostome pharynx chordate pharynx UBERON:0001042 A portion of the respiratory and digestive tracts; its distal limit is the superior part of the esophagus and it connects the nasal and oral cavities with the esophagus and larynx; it contains the valleculae and the pyriform recesses; its upper limits are the nasal cavity and cranial base.[FEED]. http://www.feedexp.org Tube that connects the pharynx to the stomach. In mammals, the oesophagus connects the buccal cavity with the stomach. The stratified squamous non-keratinised epithelium lining the buccal cavity is continued through the pharynx down into the oesophagus. The lowest part of the oesophagus (ca. 2 cm) is lined with gastric mucosa and covered by peritoneum. The main body of the oesophagus is lined with small, simple mucous glands. Each gland opens into the lumen by a long duct which pierces the muscularis mucosae (Wilson and Washington, 1989). A sphincter is situated at the point where the oesophagus enters the stomach to prevent gastro-oesophageal reflux, i.e. to prevent acidic gastric contents from reaching stratified epithelia of the oesophagus, where they can cause inflammation and irritation (Wilson and Washington, 1989; Brown et al., 1993). AAO:0000145 ANISEED:1235301 BTO:0000959 CALOHA:TS-0700 EFO:0000835 EHDAA2:0001285 EHDAA:2937 EMAPA:16833 EV:0100069 FMA:7131 GAID:291 MA:0000352 MAT:0000048 MESH:D004947 MIAA:0000048 NCIT:C12389 SCTID:181245004 TAO:0000204 VHOG:0000450 Wikipedia:Esophagus XAO:0000127 ZFA:0000204 galen:Esophagus gullet oesophagus uberon UBERON:0001043 esophagus UBERON:0001043 Tube that connects the pharynx to the stomach. In mammals, the oesophagus connects the buccal cavity with the stomach. The stratified squamous non-keratinised epithelium lining the buccal cavity is continued through the pharynx down into the oesophagus. The lowest part of the oesophagus (ca. 2 cm) is lined with gastric mucosa and covered by peritoneum. The main body of the oesophagus is lined with small, simple mucous glands. Each gland opens into the lumen by a long duct which pierces the muscularis mucosae (Wilson and Washington, 1989). A sphincter is situated at the point where the oesophagus enters the stomach to prevent gastro-oesophageal reflux, i.e. to prevent acidic gastric contents from reaching stratified epithelia of the oesophagus, where they can cause inflammation and irritation (Wilson and Washington, 1989; Brown et al., 1993). Wikipedia:Esophagus http://www.rivm.nl/interspeciesinfo/inter/oesophagus/ Primordia are populations of contiguous cells that are morphologically distinct and already correspond in extent to a later organ/tissue[FBbt, Hartenstein, V. (2004)]. AEO:0000171 BTO:0001886 EFO:0001652 EHDAA2:0003171 FMA:86589 MAT:0000482 NCIT:C34275 Wikipedia:Primordium XAO:0003043 uberon bud future organ placode rudiment UBERON:0001048 primordium UBERON:0001048 Primordia are populations of contiguous cells that are morphologically distinct and already correspond in extent to a later organ/tissue[FBbt, Hartenstein, V. (2004)]. BTO:0001886 FB:DJS FB:FBrf0089570 http://flybase.org/reports/FBrf0178740.html placode FBbt:00005495 In the developing vertebrate, the neural tube is the embryo's precursor to the central nervous system, which comprises the brain and spinal cord. The neural groove gradually deepens as the neural folds become elevated, and ultimately the folds meet and coalesce in the middle line and convert the groove into a closed tube, the neural tube or neural canal (which strictly speaking is the center of the neural tube), the ectodermal wall of which forms the rudiment of the nervous system. [WP,unvetted]. AAO:0010617 BTO:0001057 CALOHA:TS-2371 DHBA:10154 EHDAA2:0001254 EHDAA:2869 EHDAA:908 EMAPA:16164 EMAPA:16757 FMA:293882 MAT:0000069 MIAA:0000069 NCIT:C34226 SCTID:362852000 TAO:0001135 VHOG:0000307 Wikipedia:Neural_tube XAO:0003204 ZFA:0001135 neuronames:1365 uberon neural primordium presumptive central nervous system UBERON:0001049 neural tube UBERON:0001049 In the developing vertebrate, the neural tube is the embryo's precursor to the central nervous system, which comprises the brain and spinal cord. The neural groove gradually deepens as the neural folds become elevated, and ultimately the folds meet and coalesce in the middle line and convert the groove into a closed tube, the neural tube or neural canal (which strictly speaking is the center of the neural tube), the ectodermal wall of which forms the rudiment of the nervous system. [WP,unvetted]. Wikipedia:Neural_tube Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species. AAO:0010841 AEO:0000000 BFO:0000004 BILA:0000000 BIRNLEX:6 CARO:0000000 EHDAA2:0002229 FMA:62955 HAO:0000000 MA:0000001 NCIT:C12219 TAO:0100000 TGMA:0001822 WBbt:0000100 XAO:0000000 ZFA:0100000 uberon UBERON:0001062 anatomical entity UBERON:0001062 Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species. FMA:62955 http://orcid.org/0000-0001-9114-8737 A zone of skin that is part of a back [Automatically generated definition]. EMAPA:36392 FMA:10462 FMA:22985 MA:0000498 SCTID:181492002 back skin back zone of skin skin, dorsal region zone of skin of back uberon UBERON:0001068 EDITOR_NOTE TODO - distinguish between entire skin of region and arbitrary zone of skin on region skin of back UBERON:0001068 A zone of skin that is part of a back [Automatically generated definition]. OBOL:automatic back zone of skin OBOL:automatic skin, dorsal region https://orcid.org/0000-0002-6601-2165 zone of skin of back OBOL:automatic A terminal branch of the left or right common carotid artery which supplies oxygenated blood to to the throat, neck glands, tongue, face, mouth, ear, scalp and dura mater of the meninges[MP]. AAO:0010218 AAO:0010416 BTO:0004696 EFO:0001953 EHDAA2:0000461 EMAPA:18611 FMA:10635 GAID:480 MA:0001929 MESH:D002342 NCIT:C32551 SCTID:362044002 VHOG:0000265 Wikipedia:External_carotid_artery XAO:0000345 external carotid uberon UBERON:0001070 external carotid artery UBERON:0001070 A terminal branch of the left or right common carotid artery which supplies oxygenated blood to to the throat, neck glands, tongue, face, mouth, ear, scalp and dura mater of the meninges[MP]. MGI:anna external carotid AAO:0010218 It ascends beneath the anterior margin of the trapezius, distributing branches to it, and to the neighboring muscles and lymph glands in the neck, and anastomosing with the superficial branch of the descending branch of the occipital artery. FMA:10665 MA:0002052 NCIT:C53005 SCTID:161746006 Wikipedia:Superficial_part_of_transverse_cervical_artery superficial branch of transverse cervical artery uberon UBERON:0001071 The transverse cervical artery splits into two branches, a superficial one and a deep one[WP] superficial cervical artery UBERON:0001071 It ascends beneath the anterior margin of the trapezius, distributing branches to it, and to the neighboring muscles and lymph glands in the neck, and anastomosing with the superficial branch of the descending branch of the occipital artery. Wikipedia:Superficial_part_of_transverse_cervical_artery superficial branch of transverse cervical artery Wikipedia:Superficial_part_of_transverse_cervical_artery A vein that carries deoxygenated blood from the lower half of the body into the right atrium of the heart. AAO:0011083 BTO:0002682 EHDAA2:0000611 EMAPA:18416 FMA:10951 GAID:548 MA:0000480 MESH:D014682 NCIT:C12815 SCTID:181369003 VHOG:0001194 Wikipedia:Inferior_vena_cava XAO:0000388 galen:InferiorVenaCava inferior caval vein posterior vena cava uberon caudal vena cava postcava UBERON:0001072 inferior vena cava UBERON:0001072 A vein that carries deoxygenated blood from the lower half of the body into the right atrium of the heart. Wikipedia:Inferior_vena_cava http://orcid.org/0000-0002-6601-2165 inferior caval vein http://orcid.org/0000-0002-6601-2165 posterior vena cava PMID:21154280 caudal vena cava VHOG:0001194 A potential space between the visceral and parietal layers of the pericardium. BSA:0000091 EHDAA2:0001434 EMAPA:16131 EMAPA:16132 FMA:11350 MA:0000053 NCIT:C38662 SCTID:362027001 TAO:0002220 VHOG:0000556 Wikipedia:Pericardial_cavity ZFA:0001655 galen:PericardialSpace cavity of pericardial sac pericardial space uberon UBERON:0001074 pericardial cavity UBERON:0001074 A potential space between the visceral and parietal layers of the pericardium. Wikipedia:Pericardium pericardial space Wikipedia:Pericardial_cavity Endocardium that is part of the cardiac ventricle. EMAPA:32747 FMA:12148 MA:0000079 SCTID:192172004 TAO:0002247 VHOG:0000607 ZFA:0001615 cardiac ventricle endocardium endocardium of cardiac ventricle endocardium of heart ventricle endocardium of lower chamber of heart endocardium of ventricle of heart heart ventricle endocardium lower chamber of heart endocardium ventricle endocardium ventricle of heart endocardium ventricular endocardium uberon ventricle endocardial tissue UBERON:0001081 endocardium of ventricle UBERON:0001081 Endocardium that is part of the cardiac ventricle. ZFIN:curator cardiac ventricle endocardium OBOL:automatic endocardium of cardiac ventricle OBOL:automatic endocardium of heart ventricle OBOL:automatic endocardium of lower chamber of heart OBOL:automatic endocardium of ventricle of heart OBOL:automatic heart ventricle endocardium OBOL:automatic lower chamber of heart endocardium OBOL:automatic ventricle of heart endocardium OBOL:automatic ventricle endocardial tissue VHOG:0000607 An epicardial layer that lines a cardiac ventricle. FMA:12150 TAO:0005058 ZFA:0005058 cardiac ventricle epicardium ventricular epicardium uberon UBERON:0001082 epicardium of ventricle UBERON:0001082 An epicardial layer that lines a cardiac ventricle. http://orcid.org/0000-0002-6601-2165 cardiac ventricle epicardium OBOL:automatic Muscular layer of the cardiac ventricle composed of a compact myocardial layer surrounding the trabecular layer. EFO:0003088 EMAPA:32748 FMA:12151 MA:0000082 SCTID:192084000 TAO:0005061 VHOG:0000604 ZFA:0005061 ventricle myocardium ventricular myocardium uberon ventricle cardiac muscle UBERON:0001083 myocardium of ventricle UBERON:0001083 Muscular layer of the cardiac ventricle composed of a compact myocardial layer surrounding the trabecular layer. ZFIN:curator ventricle cardiac muscle VHOG:0000604 A zone of skin that is part of a head [Automatically generated definition]. FMA:12166 FMA:24756 MA:0000582 NCIT:C52757 SCTID:181484006 adult head zone of skin head skin head zone of skin zone of skin of adult head zone of skin of head uberon UBERON:0001084 EDITOR_NOTE TODO - distinguish between entire skin of region and arbitrary zone of skin on region skin of head UBERON:0001084 A zone of skin that is part of a head [Automatically generated definition]. OBOL:automatic adult head zone of skin OBOL:automatic head zone of skin OBOL:automatic zone of skin of adult head OBOL:automatic zone of skin of head OBOL:automatic A zone of skin that is part of a trunk [Automatically generated definition]. FMA:12167 FMA:23093 MA:0000517 NCIT:C12295 SCTID:181489001 torso zone of skin trunk skin trunk zone of skin zone of skin of torso zone of skin of trunk uberon UBERON:0001085 EDITOR_NOTE TODO - distinguish between entire skin of region and arbitrary zone of skin on region skin of trunk UBERON:0001085 A zone of skin that is part of a trunk [Automatically generated definition]. OBOL:automatic torso zone of skin OBOL:automatic trunk zone of skin OBOL:automatic zone of skin of torso OBOL:automatic zone of skin of trunk OBOL:automatic Transudate contained in the pleural cavity. BTO:0003080 FMA:12273 MA:0002532 MAT:0000500 Wikipedia:Pleural_fluid ncithesaurus:Pleural_Fluid uberon UBERON:0001087 pleural fluid UBERON:0001087 Transudate contained in the pleural cavity. FMA:12273 Joint fluid is a transudate of plasma that is actively secreted by synovial cells. BTO:0001339 CALOHA:TS-0996 ENVO:02000039 FMA:12277 GAID:265 MA:0002544 MESH:D013582 NCIT:C33718 TAO:0005154 Wikipedia:Synovial_fluid ZFA:0005154 galen:SynovialFluid joint fluid uberon UBERON:0001090 synovial fluid UBERON:0001090 Joint fluid is a transudate of plasma that is actively secreted by synovial cells. https://www.ncbi.nlm.nih.gov/books/NBK274/ joint fluid https://www.ncbi.nlm.nih.gov/books/NBK274/ An anatomical wall that is part of a esophagus [Automatically generated definition]. EMAPA:35326 FMA:12611 MA:0002691 anatomical wall of esophagus anatomical wall of gullet anatomical wall of oesophagus esophageal wall esophagus anatomical wall esophagus wall gullet anatomical wall gullet wall oesophagus anatomical wall oesophagus wall wall of gullet wall of oesophagus uberon UBERON:0001096 wall of esophagus UBERON:0001096 An anatomical wall that is part of a esophagus [Automatically generated definition]. OBOL:automatic anatomical wall of esophagus OBOL:automatic anatomical wall of gullet OBOL:automatic anatomical wall of oesophagus OBOL:automatic esophagus anatomical wall OBOL:automatic gullet anatomical wall OBOL:automatic gullet wall OBOL:automatic oesophagus anatomical wall OBOL:automatic oesophagus wall OBOL:automatic wall of gullet OBOL:automatic wall of oesophagus OBOL:automatic A thin musculomebranous barrier that separates the abdominal and thoracic cavities. Often used for breathing control. BTO:0000341 CALOHA:TS-0198 EFO:0000937 EHDAA2:0003495 EMAPA:17701 EV:0100376 FMA:13295 GAID:158 MA:0001904 MAT:0000502 MESH:D003964 NCIT:C12702 SCTID:181614006 VHOG:0000713 Wikipedia:Thoracid_diaphragm diaphragm muscle diaphragm of thorax thoracic diaphragm uberon midriff phren UBERON:0001103 diaphragm UBERON:0001103 A thin musculomebranous barrier that separates the abdominal and thoracic cavities. Often used for breathing control. MP:0002279 diaphragm muscle BTO:0000341 midriff BTO:0000341 phren BTO:0000341 Muscle tissue composed of cardiac muscle cells, forming the muscles of the heart[ZFA,modified]. UBERON:0007096 AAO:0010245 AEO:0000142 BILA:0000134 BTO:0000199 CALOHA:TS-0440 EHDAA2:0003142 EMAPA:32688 FMA:14068 TAO:0005280 Wikipedia:Cardiac_muscle ZFA:0005280 galen:CardiacMuscle galen:CardiacMuscleTissue ncithesaurus:Heart_Muscle cardiac muscle cardiac muscle muscle tissue cardiac muscle textus muscularis heart muscle muscle tissue heart muscle textus muscularis heart myocardium muscle tissue heart myocardium textus muscularis muscle of heart muscle tissue muscle of heart textus muscularis muscle tissue of cardiac muscle muscle tissue of heart muscle muscle tissue of heart myocardium muscle tissue of muscle of heart muscle tissue of myocardium myocardium muscle tissue myocardium textus muscularis textus muscularis of cardiac muscle textus muscularis of heart muscle textus muscularis of heart myocardium textus muscularis of muscle of heart textus muscularis of myocardium uberon cardiac musculature UBERON:0001133 cardiac muscle tissue UBERON:0001133 Muscle tissue composed of cardiac muscle cells, forming the muscles of the heart[ZFA,modified]. ZFA:0005280 cardiac muscle muscle tissue OBOL:automatic cardiac muscle textus muscularis OBOL:automatic heart muscle muscle tissue OBOL:automatic heart muscle textus muscularis OBOL:automatic heart myocardium muscle tissue OBOL:automatic heart myocardium textus muscularis OBOL:automatic muscle of heart muscle tissue OBOL:automatic muscle of heart textus muscularis OBOL:automatic muscle tissue of cardiac muscle OBOL:automatic muscle tissue of heart muscle OBOL:automatic muscle tissue of heart myocardium OBOL:automatic muscle tissue of muscle of heart OBOL:automatic muscle tissue of myocardium OBOL:automatic myocardium muscle tissue OBOL:automatic myocardium textus muscularis OBOL:automatic textus muscularis of cardiac muscle OBOL:automatic textus muscularis of heart muscle OBOL:automatic textus muscularis of heart myocardium OBOL:automatic textus muscularis of muscle of heart OBOL:automatic textus muscularis of myocardium OBOL:automatic cardiac musculature BILA:0000134 Muscle tissue that consists primarily of skeletal muscle fibers. skeletal muscle EMAPA:32716 FMA:14069 MA:0002439 NCIT:C13050 SCTID:426215008 Wikipedia:Skeletal_striated_muscle uberon skeletal muscle system somatic muscle UBERON:0001134 skeletal muscle tissue UBERON:0001134 Muscle tissue that consists primarily of skeletal muscle fibers. https://github.com/obophenotype/uberon/issues/324 skeletal muscle system BTO:0001103 somatic muscle BTO:0001103 Muscle tissue which is unstriated, composed primarily of smooth muscle fibers surrounded by a reticulum of collagen and elastic fibers. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length[GO]. AAO:0010244 AEO:0000141 BTO:0001260 CALOHA:TS-0943 EFO:0000889 EHDAA2:0003141 EMAPA:32717 EV:0100378 FMA:14070 GAID:167 MA:0000166 MAT:0000303 MESH:D009130 MIAA:0000303 NCIT:C12437 TAO:0005274 VHOG:0001246 WBbt:0005781 Wikipedia:Smooth_muscle_tissue XAO:0000175 ZFA:0005274 galen:SmoothMuscle galen:SmoothMuscleTissue involuntary muscle non-striated muscle smooth muscle uberon UBERON:0001135 smooth muscle tissue UBERON:0001135 Muscle tissue which is unstriated, composed primarily of smooth muscle fibers surrounded by a reticulum of collagen and elastic fibers. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length[GO]. GO:0006939 Wikipedia:Smooth_muscle_tissue Simple squamous epithelium of mesodermal origin which lines serous membranes. Examples: mesothelium of pleura, mesothelium of peritoneum[FMA]. Wikipedia: The mesothelium is a membrane that forms the lining of several body cavities: the pleura (thoracal cavity), peritoneum (abdominal cavity including the mesentery) and pericardium (heart sac). Mesothelial tissue also surrounds the male internal reproductive organs (the tunica vaginalis testis) and covers the internal reproductive organs of women (the tunica serosa uteri). AEO:0000111 BTO:0002422 CALOHA:TS-1183 EHDAA2_RETIRED:0003111 EHDAA:2331 EHDAA:2349 EHDAA:295 EHDAA:6073 EHDAA:640 EHDAA:646 EMAPA:32856 FMA:14074 MA:0000565 NCIT:C33105 SCTID:361918002 Wikipedia:Mesothelium uberon UBERON:0001136 mesothelium UBERON:0001136 Simple squamous epithelium of mesodermal origin which lines serous membranes. Examples: mesothelium of pleura, mesothelium of peritoneum[FMA]. Wikipedia: The mesothelium is a membrane that forms the lining of several body cavities: the pleura (thoracal cavity), peritoneum (abdominal cavity including the mesentery) and pericardium (heart sac). Mesothelial tissue also surrounds the male internal reproductive organs (the tunica vaginalis testis) and covers the internal reproductive organs of women (the tunica serosa uteri). FMA:14074 Wikipedia:Mesothelium A major subdivision of an organism that is the entire part of the organism dorsal to a horizontal plane and bounded on one side by the same transverse plane. In vertebrares this includes the vertebral column.. BTO:0001713 CALOHA:TS-2223 EFO:0001405 FMA:14181 GAID:30 MESH:D001415 NCIT:C13062 SCTID:123961009 Wikipedia:Dorsum_(anatomy) galen:Back back back of body proper dorsal part of organism uberon UBERON:0001137 dorsum UBERON:0001137 A major subdivision of an organism that is the entire part of the organism dorsal to a horizontal plane and bounded on one side by the same transverse plane. In vertebrares this includes the vertebral column.. BSPO:0000063 UBERONREF:0000006 Wikipedia:Dorsum_(anatomy) back FMA:14181 back of body proper FMA:14181 A vein that carries deoxygenated blood from its corresponding ovary to inferior vena cava or one of its tributaries. EMAPA:18644 FMA:14346 MA:0002186 NCIT:C53058 SCTID:278193003 Wikipedia:Ovarian_vein female reproductive system gonad vein female reproductive system gonada vein gonad of female reproductive system vein gonada of female reproductive system vein ovary vein vein of female reproductive system gonad vein of female reproductive system gonada vein of gonad of female reproductive system vein of gonada of female reproductive system vein of ovary uberon UBERON:0001145 ovarian vein UBERON:0001145 A vein that carries deoxygenated blood from its corresponding ovary to inferior vena cava or one of its tributaries. Wikipedia:Ovarian_vein female reproductive system gonad vein OBOL:automatic female reproductive system gonada vein OBOL:automatic gonad of female reproductive system vein OBOL:automatic gonada of female reproductive system vein OBOL:automatic ovary vein OBOL:automatic vein of female reproductive system gonad OBOL:automatic vein of female reproductive system gonada OBOL:automatic vein of gonad of female reproductive system OBOL:automatic vein of gonada of female reproductive system OBOL:automatic vein of ovary OBOL:automatic The layered structure that makes up the stomach, typiclly consists of a serous coat, a muscular coat, a mucous membrane, and other tissue layers in between. EMAPA:35826 FMA:14582 MA:0002692 SCTID:279995000 galen:WallOfStomach anatomical wall of stomach anatomical wall of ventriculus gastric wall stomach anatomical wall stomach wall ventriculus anatomical wall ventriculus wall wall of ventriculus uberon UBERON:0001167 wall of stomach UBERON:0001167 The layered structure that makes up the stomach, typiclly consists of a serous coat, a muscular coat, a mucous membrane, and other tissue layers in between. MGI:csmith MP:0010783 anatomical wall of stomach OBOL:automatic anatomical wall of ventriculus OBOL:automatic stomach anatomical wall OBOL:automatic ventriculus anatomical wall OBOL:automatic ventriculus wall OBOL:automatic wall of ventriculus OBOL:automatic The inner layer of peritoneum that is wrapped around organs located inside the intraperitoneal space. EMAPA:16592 FMA:14703 SCTID:362702003 TAO:0005132 VHOG:0001528 Wikipedia:Visceral_peritoneum ZFA:0005132 visceral serous membrane of peritoneum uberon UBERON:0001178 visceral peritoneum UBERON:0001178 The inner layer of peritoneum that is wrapped around organs located inside the intraperitoneal space. Wikipedia:Peritoneum#Types http://orcid.org/0000-0002-6601-2165 visceral serous membrane of peritoneum UBERON:cjm Anatomical cavity bounded by visceral and parietal peritoneum. BTO:0001782 EHDAA2:0001446 EMAPA:16138 FMA:14704 GAID:24 MA:0000054 MESH:D010529 NCIT:C12769 SCTID:181616008 VHOG:0000852 Wikipedia:Peritoneal_cavity uberon UBERON:0001179 peritoneal cavity UBERON:0001179 Anatomical cavity bounded by visceral and parietal peritoneum. Wikipedia:Peritoneal_cavity http://orcid.org/0000-0002-6601-2165 https://github.com/obophenotype/uberon/issues/86 An artery that supplies an ovary. EMAPA:18620 FMA:14761 MA:0002012 NCIT:C33242 SCTID:244280002 Wikipedia:Ovarian_artery ovarian arterial tree uberon UBERON:0001190 ovarian artery UBERON:0001190 An artery that supplies an ovary. OBOL:automatic The mucosal layer that lines the stomach. BTO:0001308 CALOHA:TS-0404 EMAPA:35817 FMA:14907 GAID:321 MA:0002683 MESH:D005753 NCIT:C32656 SCTID:362131005 Wikipedia:Gastric_mucosa galen:GastricMucosa gastric mucosa gastric mucous membrane mucosa of organ of stomach mucosa of organ of ventriculus mucosa of ventriculus mucous membrane of stomach mucous membrane of ventriculus organ mucosa of stomach organ mucosa of ventriculus stomach mucosa stomach mucosa of organ stomach mucous membrane stomach organ mucosa tunica mucosa (gaster) ventriculus mucosa ventriculus mucosa of organ ventriculus mucous membrane ventriculus organ mucosa uberon Magenschleimhaut UBERON:0001199 mucosa of stomach UBERON:0001199 The mucosal layer that lines the stomach. http://orcid.org/0000-0002-6601-2165 mucosa of organ of stomach OBOL:automatic mucosa of organ of ventriculus OBOL:automatic mucosa of ventriculus OBOL:automatic mucous membrane of ventriculus OBOL:automatic organ mucosa of stomach OBOL:automatic organ mucosa of ventriculus OBOL:automatic stomach mucosa of organ OBOL:automatic stomach mucous membrane OBOL:automatic stomach organ mucosa OBOL:automatic ventriculus mucosa OBOL:automatic ventriculus mucosa of organ OBOL:automatic ventriculus mucous membrane OBOL:automatic ventriculus organ mucosa OBOL:automatic Magenschleimhaut BTO:0001308 The fibrous connective tissue layer beneath the stomach mucosa. BTO:0002110 EMAPA:35825 FMA:14908 MA:0002685 NCIT:C32663 SCTID:52459002 gastric submucosa stomach submucosa submucosa of ventriculus tela submucosa (gaster) ventriculus submucosa uberon submucous layer of stomach tela submucosa ventriculi UBERON:0001200 submucosa of stomach UBERON:0001200 The fibrous connective tissue layer beneath the stomach mucosa. MGI:csmith MP:0010794 submucosa of ventriculus OBOL:automatic ventriculus submucosa OBOL:automatic submucous layer of stomach BTO:0002110 tela submucosa ventriculi BTO:0002110 The outermost layer of the stomach wall, consisting of layers of connective tissue continuous with the peritoneum. EMAPA:35822 FMA:14914 MA:0001626 NCIT:C32662 SCTID:1353004 anatomical wall of stomach serosa anatomical wall of stomach serous membrane anatomical wall of ventriculus serosa anatomical wall of ventriculus serous membrane gastric wall serosa gastric wall serous membrane serosa of anatomical wall of stomach serosa of anatomical wall of ventriculus serosa of gastric wall serosa of stomach anatomical wall serosa of stomach wall serosa of ventriculus anatomical wall serosa of ventriculus wall serosa of wall of stomach serosa of wall of ventriculus serous coat of stomach serous membrane of anatomical wall of stomach serous membrane of anatomical wall of ventriculus serous membrane of gastric wall serous membrane of stomach anatomical wall serous membrane of stomach wall serous membrane of ventriculus anatomical wall serous membrane of ventriculus wall serous membrane of wall of stomach serous membrane of wall of ventriculus stomach anatomical wall serosa stomach anatomical wall serous membrane stomach serosa stomach wall serosa stomach wall serous membrane tunica serosa (gaster) ventriculus anatomical wall serosa ventriculus anatomical wall serous membrane ventriculus wall serosa ventriculus wall serous membrane visceral peritoneum of stomach wall of stomach serosa wall of stomach serous membrane wall of ventriculus serosa wall of ventriculus serous membrane uberon gastric serosa UBERON:0001201 serosa of stomach UBERON:0001201 The outermost layer of the stomach wall, consisting of layers of connective tissue continuous with the peritoneum. MGI:csmith MP:0010793 anatomical wall of stomach serosa OBOL:automatic anatomical wall of stomach serous membrane OBOL:automatic anatomical wall of ventriculus serosa OBOL:automatic anatomical wall of ventriculus serous membrane OBOL:automatic gastric wall serosa OBOL:automatic gastric wall serous membrane OBOL:automatic serosa of anatomical wall of stomach OBOL:automatic serosa of anatomical wall of ventriculus OBOL:automatic serosa of gastric wall OBOL:automatic serosa of stomach anatomical wall OBOL:automatic serosa of stomach wall OBOL:automatic serosa of ventriculus anatomical wall OBOL:automatic serosa of ventriculus wall OBOL:automatic serosa of wall of stomach OBOL:automatic serosa of wall of ventriculus OBOL:automatic serous membrane of anatomical wall of stomach OBOL:automatic serous membrane of anatomical wall of ventriculus OBOL:automatic serous membrane of gastric wall OBOL:automatic serous membrane of stomach anatomical wall OBOL:automatic serous membrane of stomach wall OBOL:automatic serous membrane of ventriculus anatomical wall OBOL:automatic serous membrane of ventriculus wall OBOL:automatic serous membrane of wall of stomach OBOL:automatic serous membrane of wall of ventriculus OBOL:automatic stomach anatomical wall serosa OBOL:automatic stomach anatomical wall serous membrane OBOL:automatic stomach wall serosa OBOL:automatic stomach wall serous membrane OBOL:automatic ventriculus anatomical wall serosa OBOL:automatic ventriculus anatomical wall serous membrane OBOL:automatic ventriculus wall serosa OBOL:automatic ventriculus wall serous membrane OBOL:automatic wall of stomach serosa OBOL:automatic wall of stomach serous membrane OBOL:automatic wall of ventriculus serosa OBOL:automatic wall of ventriculus serous membrane OBOL:automatic Transudate contained in the peritoneal cavity. BTO:0001031 EMAPA:35683 FMA:16515 MA:0002531 Wikipedia:Peritoneal_fluid ncithesaurus:Peritoneal_Fluid uberon UBERON:0001268 peritoneal fluid UBERON:0001268 Transudate contained in the peritoneal cavity. FMA:16515 The epithelial layer of the stomach . BTO:0000500 CALOHA:TS-2068 EHDAA2:0001918 EMAPA:17023 FMA:17091 MA:0001610 SCTID:64977002 VHOG:0001433 epithelial tissue of stomach epithelial tissue of ventriculus epithelium of ventriculus stomach epithelial tissue stomach epithelium ventriculus epithelial tissue ventriculus epithelium uberon gastric epithelium UBERON:0001276 epithelium of stomach UBERON:0001276 The epithelial layer of the stomach . MP:0000471 epithelial tissue of stomach OBOL:automatic epithelial tissue of ventriculus OBOL:automatic epithelium of ventriculus OBOL:automatic stomach epithelial tissue OBOL:automatic stomach epithelium OBOL:automatic ventriculus epithelial tissue OBOL:automatic ventriculus epithelium OBOL:automatic gastric epithelium BTO:0000500 The outer layer of peritoneum that is attached to the abdominal and pelvic walls. UBERON:0004459 AAO:0010816 EMAPA:16591 FMA:21451 SCTID:362700006 TAO:0005131 VHOG:0001527 Wikipedia:Parietal_peritoneum ZFA:0005131 parietal serous membrane of peritoneum uberon peritoneal cavity lining UBERON:0001366 parietal peritoneum UBERON:0001366 The outer layer of peritoneum that is attached to the abdominal and pelvic walls. Wikipedia:Peritoneum#Types http://orcid.org/0000-0002-6601-2165 parietal serous membrane of peritoneum UBERON:cjm A zone of skin that is part of an abdomen [Automatically generated definition]. EFO:0000214 FMA:22988 FMA:23000 MA:0000523 NCIT:C52758 SCTID:361707007 abdomen skin abdomen zone of skin abdominal skin skin of abdomen proper zone of skin of abdomen uberon UBERON:0001416 skin of abdomen UBERON:0001416 A zone of skin that is part of an abdomen [Automatically generated definition]. OBOL:automatic abdomen zone of skin OBOL:automatic skin of abdomen proper FMA:22988 zone of skin of abdomen OBOL:automatic A zone of skin that is part of a neck [Automatically generated definition]. FMA:23021 FMA:23022 MA:0000590 NCIT:C52756 SCTID:361705004 neck (volume) zone of skin neck skin neck zone of skin zone of skin of neck zone of skin of neck (volume) uberon UBERON:0001417 skin of neck UBERON:0001417 A zone of skin that is part of a neck [Automatically generated definition]. OBOL:automatic neck (volume) zone of skin OBOL:automatic neck zone of skin OBOL:automatic zone of skin of neck OBOL:automatic zone of skin of neck (volume) OBOL:automatic A zone of skin that is part of a thorax [Automatically generated definition]. FMA:23028 FMA:23029 MA:0000564 SCTID:281723000 thoracic skin thorax skin thorax zone of skin zone of skin of thorax uberon upper body skin UBERON:0001418 skin of thorax UBERON:0001418 A zone of skin that is part of a thorax [Automatically generated definition]. OBOL:automatic thorax zone of skin OBOL:automatic zone of skin of thorax OBOL:automatic An organism subdivision that includes the pectoral girdle skeleton and associated soft tissue. Note that this includes both the skeletal elements and associated tissues (integument, muscle, etc). Examples: There are only two instances in an organism, right and left pectoral girdle regions. FMA:23217 SCTID:229759004 VSAO:0000305 galen:ShoulderGirdle girdle - pectoral cingulum membri superioris shoulder girdle upper limb girdle uberon pectoral girdle pectoral region UBERON:0001421 pectoral girdle region UBERON:0001421 An organism subdivision that includes the pectoral girdle skeleton and associated soft tissue. Note that this includes both the skeletal elements and associated tissues (integument, muscle, etc). Examples: There are only two instances in an organism, right and left pectoral girdle regions. FMA:23217 UBERONREF:0000003 https://orcid.org/0000-0002-6601-2165 cingulum membri superioris FMA:TA shoulder girdle FMA:23217 upper limb girdle FMA:23217 Anatomical system that is a multi-element, multi-tissue anatomical cluster that consists of the skeleton and the articular system. AAO:0000566 BTO:0001486 CALOHA:TS-1320 EFO:0000806 EHDAA2:0003168 EMAPA:35773 FMA:23881 MA:0000018 NCIT:C12788 TAO:0000434 VHOG:0001254 VSAO:0000027 XAO:0003060 ZFA:0000434 skeleton system uberon Skelettsystem UBERON:0001434 skeletal system UBERON:0001434 Anatomical system that is a multi-element, multi-tissue anatomical cluster that consists of the skeleton and the articular system. GO_REF:0000034 VSAO:0000027 http://dx.plos.org/10.1371/journal.pone.0051070 Skelettsystem BTO:0001486 FMA:24218 SCTID:123852005 XAO:0000040 head subdivision uberon head region region of head UBERON:0001444 subdivision of head UBERON:0001444 A subdivision of the head that has as parts the layers deep to the surface of the anterior surface, including the mouth, eyes, and nose (when present). In vertebrates, this includes the facial skeleton and structures superficial to the facial skeleton (cheeks, mouth, eyeballs, skin of face, etc). BTO:0003369 CALOHA:TS-2216 EMAPA:32763 FMA:24728 GAID:64 HAO:0000316 MA:0002473 MESH:D005145 NCIT:C13071 SCTID:302549007 Wikipedia:Face galen:Face uberon visage UBERON:0001456 face UBERON:0001456 A subdivision of the head that has as parts the layers deep to the surface of the anterior surface, including the mouth, eyes, and nose (when present). In vertebrates, this includes the facial skeleton and structures superficial to the facial skeleton (cheeks, mouth, eyeballs, skin of face, etc). http://orcid.org/0000-0002-6601-2165 visage BTO:0003369 A zone of skin that is part of a lip [Automatically generated definition]. FMA:24764 MA:0001579 NCIT:C12291 SCTID:244092005 lip skin lip zone of skin zone of skin of lip uberon UBERON:0001458 skin of lip UBERON:0001458 A zone of skin that is part of a lip [Automatically generated definition]. OBOL:automatic lip zone of skin OBOL:automatic zone of skin of lip OBOL:automatic Skeletal element that is composed of bone tissue. AAO:0000047 AEO:0000082 BTO:0000140 CALOHA:TS-0088 EFO:0000298 EHDAA2:0003082 EMAPA:32782 ENVO:00002039 EV:0100140 FMA:30317 FMA:5018 GAID:92 MA:0001459 MAT:0000299 MIAA:0000299 NCIT:C12366 SCTID:90780006 TAO:0001514 VHOG:0001190 VSAO:0000057 Wikipedia:Bone XAO:0000169 ZFA:0001514 galen:Bone bone organ uberon bone UBERON:0001474 bone element UBERON:0001474 Skeletal element that is composed of bone tissue. GO_REF:0000034 PSPUB:0000170 VSAO:0000057 http://dx.plos.org/10.1371/journal.pone.0051070 https://github.com/obophenotype/uberon/issues/277 bone organ FMA:5018 bone AEO:0000082 BTO:0000140 MA:0001459 VHOG:0001190 An articular capsule (or joint capsule) is an envelope surrounding a synovial joint. [WP,unvetted]. FMA:34836 GAID:263 MA:0001519 MESH:D017746 NCIT:C32259 NCIT:C84388 SCTID:182238002 Wikipedia:Articular_capsule galen:JointCapsule fibrous capsule of joint joint capsule joint fibrous capsule uberon UBERON:0001484 articular capsule UBERON:0001484 An articular capsule (or joint capsule) is an envelope surrounding a synovial joint. [WP,unvetted]. Wikipedia:Articular_capsule The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta[GO]. A portion of the aorta commencing at the upper part of the base of the left ventricle, on a level with the lower border of the third costal cartilage behind the left half of the sternum; it passes obliquely upward, forward, and to the right, in the direction of the heart's axis, as high as the upper border of the second right costal cartilage, describing a slight curve in its course, and being situated, about 6 cm behind the posterior surface of the sternum. The total length is about 5 cm in length [Wikipedia]. EHDAA2:0000147 EHDAA:9828 EMAPA:17014 FMA:3736 MA:0002570 NCIT:C32150 SCTID:181299009 Wikipedia:Ascending_aorta ascending thoracic aorta pars ascendens aortae uberon UBERON:0001496 ascending aorta UBERON:0001496 The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta[GO]. A portion of the aorta commencing at the upper part of the base of the left ventricle, on a level with the lower border of the third costal cartilage behind the left half of the sternum; it passes obliquely upward, forward, and to the right, in the direction of the heart's axis, as high as the upper border of the second right costal cartilage, describing a slight curve in its course, and being situated, about 6 cm behind the posterior surface of the sternum. The total length is about 5 cm in length [Wikipedia]. GO:0035905 Wikipedia:Ascending_aorta ascending thoracic aorta EMAPA:17014 The convex portion of the aorta between the ascending and descending parts of the aorta; branches from it include the brachiocephalic trunk, the left common carotid artery, and the left subclavian artery; the brachiocephalic trunk further splits to form the right subclavian artery and the right common carotid artery. BTO:0000157 EFO:0002526 EHDAA2:0000132 EMAPA:17613 FMA:3768 GAID:471 MA:0000475 SCTID:181300001 VHOG:0001196 Wikipedia:Arch_of_aorta uberon aortic arch thoracic aorta UBERON:0001508 arch of aorta UBERON:0001508 The convex portion of the aorta between the ascending and descending parts of the aorta; branches from it include the brachiocephalic trunk, the left common carotid artery, and the left subclavian artery; the brachiocephalic trunk further splits to form the right subclavian artery and the right common carotid artery. ISBN:0-683-40008-8 MP:0004113 aortic arch FMA:3768 thoracic aorta GAID:471 The descending aorta is the portion of the aorta in a two-pass circulatory system from the arch of aorta to the point where it divides into the common iliac arteries[GO]. The descending aorta is part of the aorta, the largest artery in the body. The descending aorta is the part of the aorta beginning at the aortic arch that runs down through the chest and abdomen. The descending aorta is divided into two portions, the thoracic and abdominal, in correspondence with the two great cavities of the trunk in which it is situated. Within the abdomen, the descending aorta branches into the two common iliac arteries which serve the legs. [WP,unvetted]. EMAPA:18606 FMA:3784 MA:0002571 NCIT:C32455 SCTID:261399002 Wikipedia:Descending_aorta pars descendens aortae uberon UBERON:0001514 descending aorta UBERON:0001514 The descending aorta is the portion of the aorta in a two-pass circulatory system from the arch of aorta to the point where it divides into the common iliac arteries[GO]. The descending aorta is part of the aorta, the largest artery in the body. The descending aorta is the part of the aorta beginning at the aortic arch that runs down through the chest and abdomen. The descending aorta is divided into two portions, the thoracic and abdominal, in correspondence with the two great cavities of the trunk in which it is situated. Within the abdomen, the descending aorta branches into the two common iliac arteries which serve the legs. [WP,unvetted]. GO:0035906 Wikipedia:Descending_aorta pars descendens aortae FMA:3784 The part of the aorta that extends from the origin at the heart to the diaphragm, and from which arises numerous branches that supply oxygenated blood to the chest cage and the organs within the chest. BTO:0000157 EFO:0002525 EMAPA:18603 FMA:3786 GAID:471 MA:0002569 MESH:D001013 NCIT:C33766 SCTID:302510009 Wikipedia:Thoracic_aorta galen:ThoracicAorta thoracic part of aorta uberon UBERON:0001515 thoracic aorta UBERON:0001515 The part of the aorta that extends from the origin at the heart to the diaphragm, and from which arises numerous branches that supply oxygenated blood to the chest cage and the organs within the chest. MP:0010468 http://www.medterms.com Abdominal part of aorta: the distal part of the descending aorta, which is the continuation of the thoracic part and gives rise to the inferior phrenic, lumbar, median sacral, superior and inferior mesenteric, middle suprarenal, renal, and testicular or ovarian arteries, and celiac trunk[BTO]. The abdominal aorta is the largest artery in the abdominal cavity. As part of the aorta, it is a direct continuation of descending aorta(of the thorax). [WP,unvetted]. BTO:0002976 EFO:0002524 EMAPA:17856 FMA:3789 GAID:470 MA:0000474 MESH:D001012 NCIT:C32038 SCTID:244231007 Wikipedia:Abdominal_aorta galen:AbdominalAorta abdominal part of aorta descending abdominal aorta pars abdominalis aortae uberon abdominal part of aorta UBERON:0001516 abdominal aorta UBERON:0001516 Abdominal part of aorta: the distal part of the descending aorta, which is the continuation of the thoracic part and gives rise to the inferior phrenic, lumbar, median sacral, superior and inferior mesenteric, middle suprarenal, renal, and testicular or ovarian arteries, and celiac trunk[BTO]. The abdominal aorta is the largest artery in the abdominal cavity. As part of the aorta, it is a direct continuation of descending aorta(of the thorax). [WP,unvetted]. BTO:0002976 Wikipedia:Abdominal_aorta abdominal part of aorta FMA:3789 descending abdominal aorta FMA:3789 pars abdominalis aortae FMA:3789 abdominal part of aorta BTO:0002976 The short first aortic arch branch and divides into the right subclavian artery and the right common carotid artery. innominate EFO:0002550 EHDAA2:0000835 EMAPA:17615 FMA:3932 GAID:476 MA:0001922 MESH:D016122 NCIT:C32814 SCTID:244244002 Wikipedia:Brachiocephalic_artery galen:BrachioCephalicArtery brachiocephalic trunk innominate artery uberon UBERON:0001529 brachiocephalic artery UBERON:0001529 The short first aortic arch branch and divides into the right subclavian artery and the right common carotid artery. MGI:csmith MP:0010663 innominate Wikipedia:Brachiocephalic_artery brachiocephalic trunk MA:0001922 innominate artery Wikipedia:Brachiocephalic_artery A bilaterally paired branched artery that originates from the aortic arches and divides into and includes as parts the internal and external carotid arteries[cjm]. carotid artery CALOHA:TS-0116 EHDAA2:0000217 EHDAA:7331 EMAPA:17855 FMA:3939 GAID:479 MA:0001926 MESH:D017536 NCIT:C32352 SCTID:362041005 VHOG:0000272 Wikipedia:Common_carotid_artery carotid artery system trunk of common carotid tree uberon UBERON:0001530 common carotid artery plus branches UBERON:0001530 A bilaterally paired branched artery that originates from the aortic arches and divides into and includes as parts the internal and external carotid arteries[cjm]. Wikipedia:Common_carotid_artery carotid artery FMA:3939 carotid artery system EHDAA2:0000217 trunk of common carotid tree FMA:3939 The rightmost of the two common carotid arteries, originating from in the neck from the brachiocephalic trunk. EMAPA:35749 FMA:3941 MA:0001928 NCIT:C33473 SCTID:362042003 Wikipedia:Right_common_carotid_artery right common carotid artery trunk of right common carotid tree uberon right common carotid artery UBERON:0001531 right common carotid artery plus branches UBERON:0001531 The rightmost of the two common carotid arteries, originating from in the neck from the brachiocephalic trunk. UBERON:cjm right common carotid artery MA:0001928 trunk of right common carotid tree FMA:3941 right common carotid artery FMA:3941 A terminal branch of the left or right common carotid artery which supplies oxygenated blood to the brain and eyes[MP]. AAO:0010219 AAO:0011054 BTO:0004697 EFO:0001952 EHDAA2:0000873 EHDAA:408 EHDAA:6389 EMAPA:16328 FMA:3947 GAID:481 MA:0001930 MESH:D002343 NCIT:C32836 SCTID:362045001 TAO:0005081 VHOG:0000267 Wikipedia:Internal_carotid_artery XAO:0000366 ZFA:0005081 cranial carotid artery internal carotid uberon UBERON:0001532 internal carotid artery UBERON:0001532 A terminal branch of the left or right common carotid artery which supplies oxygenated blood to the brain and eyes[MP]. MGI:anna cranial carotid artery ZFA:0005081 internal carotid AAO:0010219 One of two laterally paired arteries that supplies the pectoral appendages, usually branching from the dorsal aorta. AAO:0010232 EHDAA2:0001933 EHDAA:4357 EMAPA:17617 FMA:3951 GAID:511 MA:0002045 MESH:D013348 NCIT:C33643 SCTID:265790007 TAO:0005086 Wikipedia:Subclavian_artery XAO:0000365 ZFA:0005086 arterial tree of upper limb pectoral artery subclavian arterial tree uberon UBERON:0001533 subclavian artery UBERON:0001533 One of two laterally paired arteries that supplies the pectoral appendages, usually branching from the dorsal aorta. ISBN:0073040584 https://orcid.org/0000-0002-6601-2165 The subclavian artery that supplies the right pectoral appendage. EHDAA2:0004514 FMA:3953 MA:0002047 NCIT:C33490 SCTID:244246000 Wikipedia:Subclavian_artery uberon UBERON:0001534 right subclavian artery UBERON:0001534 The subclavian artery that supplies the right pectoral appendage. http://orcid.org/0000-0002-6601-2165 The leftmost of the two common carotid arteries, originating from the aortic arch in the thorax. EMAPA:35491 FMA:4058 MA:0001927 NCIT:C32956 SCTID:362043008 Wikipedia:Left_common_carotid_artery left common carotid artery trunk of left common carotid tree uberon left common carotid artery UBERON:0001536 left common carotid artery plus branches UBERON:0001536 The leftmost of the two common carotid arteries, originating from the aortic arch in the thorax. UBERON:cjm left common carotid artery MA:0001927 trunk of left common carotid tree FMA:4058 left common carotid artery FMA:4058 A tube extending from the mouth to the anus. gut AAO:0010023 BILA:0000083 BTO:0000511 BTO:0000545 EHDAA2:0000726 EHDAA:518 EMAPA:16247 FMA:45615 MA:0000917 NCIT:C34082 TAO:0000112 TGMA:0001819 VHOG:0000309 WBbt:0005743 ZFA:0000112 galen:AlimentaryTract digestive tube enteric tract alimentary canal alimentary tract uberon digestive canal gut tube UBERON:0001555 digestive tract UBERON:0001555 A tube extending from the mouth to the anus. Wikipedia:Talk:Human_gastrointestinal_tract https://github.com/geneontology/go-ontology/issues/7549 enteric tract ZFA:0000112 digestive canal BTO:0000058 The segment of the respiratory tract that starts proximally with the trachea and includes all distal structures including the lungs[WP,modified]. EHDAA2:0001036 EMAPA:16738 FMA:45662 MA:0000435 SCTID:281488008 VHOG:0000382 Wikipedia:Lower_respiratory_tract lower respiratory system uberon UBERON:0001558 lower respiratory tract UBERON:0001558 The segment of the respiratory tract that starts proximally with the trachea and includes all distal structures including the lungs[WP,modified]. Wikipedia:Lower_respiratory_tract http://orcid.org/0000-0002-6601-2165 The muscles associated with the larynx. BTO:0001626 EMAPA:35473 FMA:46562 GAID:144 MA:0001768 MESH:D007821 NCIT:C32934 SCTID:181744001 Wikipedia:Muscles_of_larynx laryngeal muscle larynx muscle larynx muscle organ muscle organ of larynx musculi laryngeales uberon UBERON:0001568 muscle of larynx UBERON:0001568 The muscles associated with the larynx. MP:0002263 larynx muscle organ OBOL:automatic muscle organ of larynx OBOL:automatic Either of a pair of lingual muscles with origin in the mandible, with insertion to the lingual fascia below the mucous membrane and epiglottis, with nerve supply from the hypoglossal nerve, and whose action depresses and protrudes the tongue. AAO:0010660 EHDAA2:0000704 EHDAA:9150 EMAPA:18276 FMA:46690 MA:0002307 NCIT:C52928 SCTID:244784007 VHOG:0000847 Wikipedia:Genioglossus_muscle genioglossus m. genioglossus musculus genioglossus uberon UBERON:0001571 genioglossus muscle UBERON:0001571 Either of a pair of lingual muscles with origin in the mandible, with insertion to the lingual fascia below the mucous membrane and epiglottis, with nerve supply from the hypoglossal nerve, and whose action depresses and protrudes the tongue. VHOG:0000847 Wikipedia:Genioglossus_muscle A muscle that attaches to the hyopid bone and to the tongue and is innervated by cranial nerve XII. AAO:0010663 EMAPA:18277 FMA:46691 MA:0002317 MFMO:0000064 NCIT:C53161 SCTID:244785008 Wikipedia:Hyoglossus_muscle hyoglossus m. hyoglossus uberon UBERON:0001572 hyoglossus muscle UBERON:0001572 A muscle that attaches to the hyopid bone and to the tongue and is innervated by cranial nerve XII. FEED:rd hyoglossus Wikipedia:Hyoglossus A muscle organ that attaches the tongue to some other structure. EHDAA2:0002063 EHDAA:9148 EMAPA:18275 FMA:46699 MA:0002296 SCTID:244782006 VHOG:0000825 extrinsic lingual muscle extrinsic tongue muscle uberon UBERON:0001575 extrinsic muscle of tongue UBERON:0001575 A muscle organ that attaches the tongue to some other structure. Wikipedia:Muscles_of_tongue https://github.com/obophenotype/uberon/issues/331 The intrinsic tongue muscles are an integral part of the tongue and completely contained within the tongue that are innervated by Cranial Nerve XII. EHDAA2:0002064 EHDAA:9152 EMAPA:18280 FMA:46701 MA:0002327 SCTID:244788005 VHOG:0000748 intrinsic lingual muscle intrinsic tongue muscle uberon UBERON:0001576 intrinsic muscle of tongue UBERON:0001576 The intrinsic tongue muscles are an integral part of the tongue and completely contained within the tongue that are innervated by Cranial Nerve XII. http://www.feedexp.org/wiki/Mammalian_Muscle_Ontology_Workshop The subclavian artery that supplies the left pectoral appendage. FMA:4694 MA:0002046 NCIT:C32972 SCTID:244245001 Wikipedia:Subclavian_artery uberon UBERON:0001584 left subclavian artery UBERON:0001584 The subclavian artery that supplies the left pectoral appendage. http://orcid.org/0000-0002-6601-2165 A vein that carries deoxygenated blood from the upper half of the body into the right atrium of the heart. BTO:0002683 EHDAA2:0001962 EHDAA:8726 EMAPA:18417 FMA:4720 GAID:549 MA:0000481 MESH:D014683 NCIT:C12816 SCTID:181368006 VHOG:0001195 Wikipedia:Superior_vena_cava galen:SuperiorVenaCava superior caval vein superior vena cava uberon cranial vena cava precava UBERON:0001585 anterior vena cava UBERON:0001585 A vein that carries deoxygenated blood from the upper half of the body into the right atrium of the heart. Wikipedia:Superior_vena_cava http://orcid.org/0000-0002-6601-2165 superior caval vein http://orcid.org/0000-0002-6601-2165 superior vena cava FMA:4720 cranial vena cava VHOG:0001195 One of two jugular veins that collect the blood from the brain, the superficial parts of the face, and the neck. [WP,unvetted]. AAO:0010236 EHDAA2:0000877 EHDAA:5407 EMAPA:17620 FMA:4724 MA:0002157 NCIT:C32849 RETIRED_EHDAA2:0000878 SCTID:181372005 Wikipedia:Internal_jugular_vein XAO:0000382 galen:InternalJugularVein internal jugular internal jugular venous tree uberon UBERON:0001586 internal jugular vein UBERON:0001586 One of two jugular veins that collect the blood from the brain, the superficial parts of the face, and the neck. [WP,unvetted]. Wikipedia:Internal_jugular_vein internal jugular EHDAA2:0000877 The bronchial veins are small vessels that return blood from the larger bronchi and structures at the roots of the lungs. The right side drains into the azygos vein, while the left side drains into the left superior intercostal vein or the accessory hemiazygos vein. The bronchial veins are counterparts to the bronchial arteries. The veins, however, do not return all of the blood supplied by the arteries; much of the blood that is carried in the bronchial arteries is returned to the heart via the pulmonary veins. [WP,unvetted]. EMAPA:36284 FMA:4749 MA:0002088 NCIT:C53031 SCTID:198293000 Wikipedia:Bronchial_veins bronchial venous tree uberon UBERON:0001592 bronchial vein UBERON:0001592 The bronchial veins are small vessels that return blood from the larger bronchi and structures at the roots of the lungs. The right side drains into the azygos vein, while the left side drains into the left superior intercostal vein or the accessory hemiazygos vein. The bronchial veins are counterparts to the bronchial arteries. The veins, however, do not return all of the blood supplied by the arteries; much of the blood that is carried in the bronchial arteries is returned to the heart via the pulmonary veins. [WP,unvetted]. Wikipedia:Bronchial_veins The ciliary muscle is a ring of smooth muscle in the middle layer of the eye that controls the eye's accommodation for viewing objects at varying distances and regulates the flow of aqueous humour through Schlemm's canal. [WP,unvetted]. BTO:0000654 EMAPA:35240 FMA:49151 MA:0001269 NCIT:C32315 SCTID:280862009 Wikipedia:Ciliary_muscle musculus ciliarus uberon Bowman`s muscles ciliaris UBERON:0001605 ciliary muscle UBERON:0001605 The ciliary muscle is a ring of smooth muscle in the middle layer of the eye that controls the eye's accommodation for viewing objects at varying distances and regulates the flow of aqueous humour through Schlemm's canal. [WP,unvetted]. Wikipedia:Ciliary_muscle musculus ciliarus BTO:0000654 Bowman`s muscles BTO:0000654 ciliaris Wikipedia:Ciliary_muscle FMA:49154 MA:0001287 SCTID:280888007 Wikipedia:Iris_muscle iris muscle iris muscle organ muscle organ of iris uberon UBERON:0001606 muscle of iris UBERON:0001606 iris muscle organ OBOL:automatic muscle organ of iris OBOL:automatic The lingual artery arises from the external carotid between the superior thyroid and facial artery[WP]. AAO:0010492 EMAPA:36324 FMA:49526 MA:0001992 NCIT:C52961 SCTID:181327002 Wikipedia:Lingual_artery lingual branch of external carotid artery uberon UBERON:0001610 lingual artery UBERON:0001610 The lingual artery arises from the external carotid between the superior thyroid and facial artery[WP]. Wikipedia:Lingual_artery A branch of the external carotid artery that supplies structures of the face. [WP,unvetted]. EMAPA:19213 FMA:49549 MA:0001950 NCIT:C32578 SCTID:181328007 Wikipedia:Facial_artery uberon external maxillary artery UBERON:0001612 facial artery UBERON:0001612 A branch of the external carotid artery that supplies structures of the face. [WP,unvetted]. Wikipedia:Facial_artery An artery that supplies deep structures of the face. It comes just out behind the neck of the mandible. [WP,unvetted]. EHDAA2:0001069 EHDAA:7357 EMAPA:17311 FMA:49675 GAID:498 MA:0001919 MESH:D008438 NCIT:C34205 SCTID:181326006 Wikipedia:Maxillary_artery uberon internal maxillary artery UBERON:0001616 maxillary artery UBERON:0001616 An artery that supplies deep structures of the face. It comes just out behind the neck of the mandible. [WP,unvetted]. Wikipedia:Maxillary_artery One of a pair of right-sided and left-sided blood vessels in the circle of Willis. It connects the three cerebral arteries of the same side. Anteriorly, it is one portion of the terminal trifurcation of the internal carotid artery. The anterior cerebral artery and the middle cerebral artery are the other two branches of the trifurcation. Posteriorly, it communicates with the posterior cerebral artery. EHDAA2:0004518 EHDAA:3352 EMAPA:18600 FMA:50084 MA:0002023 NCIT:C33357 RETIRED_EHDAA2:0001487 SCTID:181314001 TAO:0005001 Wikipedia:Posterior_communicating_artery ZFA:0005001 caudal communicating segment posterior communicating segment of the basilar artery uberon PCA PCS UBERON:0001628 posterior communicating artery UBERON:0001628 One of a pair of right-sided and left-sided blood vessels in the circle of Willis. It connects the three cerebral arteries of the same side. Anteriorly, it is one portion of the terminal trifurcation of the internal carotid artery. The anterior cerebral artery and the middle cerebral artery are the other two branches of the trifurcation. Posteriorly, it communicates with the posterior cerebral artery. Wikipedia:Posterior_communicating_artery caudal communicating segment ZFA:0005001 posterior communicating segment of the basilar artery ZFA:0005001 Organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work[GO]. muscle EV:0100146 FMA:5022 GAID:131 MA:0000015 SCTID:71616004 TAO:0005145 VHOG:0001245 XAO:0000172 ZFA:0005145 galen:Muscle uberon UBERON:0001630 muscle organ UBERON:0001630 Organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work[GO]. GO:0007517 muscle ZFA:0005145 An epithelial tube or tree of tibes that transports blood away from the heart[modified from AEO definition]. AAO:0010211 AEO:0000208 BTO:0000573 CALOHA:TS-0054 EFO:0000814 EHDAA2:0003253 EMAPA:35147 EV:0100026 FMA:50720 GAID:468 MA:0000064 MAT:0000034 MESH:D001158 MIAA:0000034 NCIT:C12372 SCTID:362877004 TAO:0000005 VHOG:0001251 Wikipedia:Artery XAO:0000114 ZFA:0000005 galen:Artery arterial subtree arterial tree organ part uberon arterial system arterial vessel UBERON:0001637 artery UBERON:0001637 An epithelial tube or tree of tibes that transports blood away from the heart[modified from AEO definition]. AEO:JB Any of the tubular branching vessels that carry blood from the capillaries toward the heart. venous subtree venous vessel AAO:0010212 AEO:0000209 BTO:0000234 CALOHA:TS-1108 EFO:0000816 EHDAA2:0003254 EMAPA:35906 EV:0100031 FMA:50723 GAID:492 MA:0000067 MAT:0000037 MESH:D014680 MIAA:0000037 NCIT:C12814 SCTID:181367001 TAO:0000082 VHOG:0001743 Wikipedia:Vein XAO:0000115 ZFA:0000082 galen:Vein venous tree organ part uberon vascular element UBERON:0001638 vein UBERON:0001638 Any of the tubular branching vessels that carry blood from the capillaries toward the heart. Wikipedia:Vein vascular element EMAPA:th Cranial nerve that has three branches - the ophthalmic (supplying the skin of the nose and upper jaw), the maxillary and the mandibular (supplying the lower jaw). AAO:0010470 BAMS:5n BAMS:Vn BAMS:nV BIRNLEX:869 BM:VN BTO:0001072 EFO:0001402 EHDAA2:0002084 EHDAA:3738 EMAPA:17576 FMA:50866 GAID:726 MA:0001100 MBA:901 MESH:D014276 MFMO:0000093 NCIT:C12806 SCTID:362459002 TAO:0000697 VHOG:0000704 Wikipedia:Trigeminal_nerve XAO:0003092 ZFA:0000697 fifth cranial nerve trigeminal V trigeminal nerve [V] trigeminal nerve tree trigeminal v nerve uberon CN-V cranial nerve V nerve V nervus trigeminus trigeminus UBERON:0001645 trigeminal nerve UBERON:0001645 Cranial nerve that has three branches - the ophthalmic (supplying the skin of the nose and upper jaw), the maxillary and the mandibular (supplying the lower jaw). ISBN:0471209627 Wikipedia:Trigeminal_nerve trigeminal V EHDAA2:0002084 nerve V NeuroNames:549 nervus trigeminus BTO:0001072 trigeminus BTO:0001072 Cranial nerve that branches into the ramus communicans (to the skin), the pretrematic (to the walls of the pharynx and mouth, viscero-sensory fibers), and the larval post-trematic branch (lost in the adult). AAO:0010474 BAMS:9n BAMS:IXn BIRNLEX:899 BTO:0004979 EHDAA2:0000709 EHDAA:3733 EMAPA:17268 FMA:50870 GAID:827 MA:0001093 MBA:808 MESH:D005930 NCIT:C12723 SCTID:362465002 TAO:0000668 VHOG:0000701 Wikipedia:Glossopharyngeal_nerve XAO:0003096 ZFA:0000668 glossopharyngeal IX glossopharyngeal IX nerve glossopharyngeal nerve [IX] glossopharyngeal nerve tree nervus glossopharyngeus ninth cranial nerve uberon cranial nerve IX nerve IX UBERON:0001649 glossopharyngeal nerve UBERON:0001649 Cranial nerve that branches into the ramus communicans (to the skin), the pretrematic (to the walls of the pharynx and mouth, viscero-sensory fibers), and the larval post-trematic branch (lost in the adult). ISBN:0471209627 Wikipedia:Glossopharyngeal_nerve glossopharyngeal IX EHDAA2:0000709 nervus glossopharyngeus ZFA:0000668 nerve IX NeuroNames:701 Cranial nerve that innervates the muscles of the tongue. AAO:0010477 BAMS:12n BAMS:XIIn BAMS:nXII BIRNLEX:820 BTO:0003386 EHDAA2:0000798 EHDAA:2859 EMAPA:17269 FMA:50871 GAID:828 MA:0001094 MBA:813 MESH:D007002 NCIT:C12732 SCTID:362471008 VHOG:0000693 Wikipedia:Hypoglossal_nerve XAO:0004215 cranial nerve XII hypoglossal XII hypoglossal XII nerve hypoglossal nerve [XII] hypoglossal nerve tree twelfth cranial nerve uberon CN-XII hypoglossal nerve/ root nerve XII UBERON:0001650 hypoglossal nerve UBERON:0001650 Cranial nerve that innervates the muscles of the tongue. ISBN:080184780X VHOG:0000693 http://orcid.org/0000-0002-6601-2165 cranial nerve XII BIRNLEX:820 hypoglossal XII EHDAA2:0000798 CN-XII VHOG:0000693 hypoglossal nerve/ root BAMS:12n nerve XII NeuroNames:704 The pulmonary artery that supplies the right lung. FMA:50872 MA:0002500 NCIT:C33489 SCTID:244235003 Wikipedia:Right_pulmonary_artery galen:RightPulmonaryArtery right main pulmonary artery right pulmonary arterial tree uberon UBERON:0001651 right pulmonary artery UBERON:0001651 The pulmonary artery that supplies the right lung. UBERON:cjm The pulmonary artery that supplies the left lung. FMA:50873 MA:0002032 NCIT:C32971 SCTID:244234004 Wikipedia:Left_pulmonary_artery galen:LeftPulmonaryArtery left main pulmonary artery left pulmonary arterial tree uberon UBERON:0001652 left pulmonary artery UBERON:0001652 The pulmonary artery that supplies the left lung. UBERON:cjm The anterior facial vein (facial vein) commences at the side of the root of the nose, and is a direct continuation of the angular vein where it also receives a small nasal branch. It lies behind the facial artery and follows a less tortuous course. It receives blood from the external palatine vein before it either joins the anterior branch of the retromandibular vein to form the common facial vein, or drains directly into the internal jugular vein. [WP,unvetted]. AAO:0010513 EMAPA:19220 FMA:50874 MA:0002115 NCIT:C32579 SCTID:181374006 Wikipedia:Facial_vein face vein vein of face uberon UBERON:0001653 facial vein UBERON:0001653 The anterior facial vein (facial vein) commences at the side of the root of the nose, and is a direct continuation of the angular vein where it also receives a small nasal branch. It lies behind the facial artery and follows a less tortuous course. It receives blood from the external palatine vein before it either joins the anterior branch of the retromandibular vein to form the common facial vein, or drains directly into the internal jugular vein. [WP,unvetted]. Wikipedia:Facial_vein face vein OBOL:automatic vein of face OBOL:automatic The cerebral veins are divisible into external and internal groups according to the outer surfaces or the inner parts of the hemispheres they drain into. The external veins are the superior cerebral veins, inferior cerebral veins, and middle cerebral vein. [WP,unvetted]. FMA:50981 GAID:530 MA:0002096 MESH:D002550 NCIT:C53037 SCTID:244392000 Wikipedia:Cerebral_veins XAO:0004160 uberon UBERON:0001663 cerebral vein UBERON:0001663 The cerebral veins are divisible into external and internal groups according to the outer surfaces or the inner parts of the hemispheres they drain into. The external veins are the superior cerebral veins, inferior cerebral veins, and middle cerebral vein. [WP,unvetted]. Wikipedia:Cerebral_veins The cranial ganglion that is associated with and extends fibers into the trigeminal nerve. AAO:0011107 BAMS:5Gn BAMS:GV BTO:0001231 EFO:0000903 EHDAA2:0002085 EHDAA:2113 EMAPA:16797 FMA:52618 GAID:725 MA:0001080 MAT:0000511 MESH:D012668 NCIT:C62642 SCTID:244449009 TAO:0000295 VHOG:0000694 Wikipedia:Trigeminal_ganglion XAO:0000427 XAO:0000428 ZFA:0000295 neuronames:1402 5th ganglion Gasserian ganglion fifth ganglion ganglion of trigeminal complex semilunar ganglion trigeminal V ganglion uberon Gasser's ganglion gV ganglion of trigeminal nerve trigeminus ganglion UBERON:0001675 trigeminal ganglion UBERON:0001675 The cranial ganglion that is associated with and extends fibers into the trigeminal nerve. http://orcid.org/0000-0002-6601-2165 http://www.ncbi.nlm.nih.gov/books/NBK53171 https://github.com/obophenotype/uberon/issues/693 5th ganglion ZFA:0000295 Gasserian ganglion Wikipedia:Trigeminal_ganglion fifth ganglion ZFA:0000295 ganglion of trigeminal complex http://orcid.org/0000-0002-6601-2165 semilunar ganglion ISBN:0471888893 trigeminal V ganglion MA:0001080 Gasser's ganglion BTO:0001231 ganglion of trigeminal nerve BTO:0001231 The bone at the lower, posterior part of the skull. EMAPA:25112 FMA:52735 GAID:227 MA:0001468 MESH:D009777 NCIT:C12757 SCTID:181796003 Wikipedia:Occipital_bone uberon occipital complex occipital squama UBERON:0001676 occipital bone UBERON:0001676 The bone at the lower, posterior part of the skull. ISBN:0-683-40008-8 MP:0005269 occipital complex http://palaeos.com/vertebrates/bones/braincase/occiput.html The large, irregular bone located at the base and side of the skull; consists of three parts at birth: squamous, tympanic, and petrous. EHDAA:6035 EMAPA:17682 FMA:52737 GAID:232 MA:0001476 MESH:D013701 NCIT:C12797 SCTID:181795004 VHOG:0000800 Wikipedia:Temporal_bone uberon UBERON:0001678 temporal bone UBERON:0001678 The large, irregular bone located at the base and side of the skull; consists of three parts at birth: squamous, tympanic, and petrous. ISBN:0-683-40008-8 MP:0005272 A horseshoe shaped bone situated in the anterior midline of the neck between the chin and the thyroid cartilage. The hyoid bone provides attachment to the muscles of the floor of the mouth and the tongue above, the larynx below, and the epiglottis and pharynx behind. [WP,modified]. AAO:0000684 EMAPA:18650 FMA:52749 GAID:197 MA:0001484 MESH:D006928 NCIT:C32752 SCTID:263352000 VHOG:0001325 Wikipedia:Hyoid_bone uberon hyoid hyoid bone hyoideum lingual bone UBERON:0001685 hyoid bone UBERON:0001685 A horseshoe shaped bone situated in the anterior midline of the neck between the chin and the thyroid cartilage. The hyoid bone provides attachment to the muscles of the floor of the mouth and the tongue above, the larynx below, and the epiglottis and pharynx behind. [WP,modified]. Wikipedia:Hyoid_bone hyoid Wikipedia:Hyoid_bone hyoid bone Wikipedia:Hyoid_bone hyoideum Wikipedia:Hyoid_bone lingual bone Wikipedia:Hyoid_bone The group of neuron cell bodies associated with the ninth cranial nerve. EHDAA2:0000710 EHDAA:2838 EMAPA:16795 FMA:53471 MA:0001077 SCTID:244451008 TAO:0001301 VHOG:0000702 ZFA:0001301 ganglion of glossopharyngeal nerve ganglion of glosspharyngeal nerve glossopharyngeal IX ganglion petrosal ganglion uberon gIX UBERON:0001701 glossopharyngeal ganglion UBERON:0001701 The group of neuron cell bodies associated with the ninth cranial nerve. MP:0001096 ganglion of glosspharyngeal nerve FMA:53471 glossopharyngeal IX ganglion MA:0001077 petrosal ganglion ZFA:0001301 Subdivision of skeletal system that surrounds and protects the brain. Includes the skull base, sensory capsules and the central part of the skull roof. FMA:53672 MA:0000317 SCTID:361731002 TAO:0001580 Wikipedia:Neuroranium XAO:0003170 ZFA:0001580 brain box uberon brain case brain pan braincase UBERON:0001703 neurocranium UBERON:0001703 Subdivision of skeletal system that surrounds and protects the brain. Includes the skull base, sensory capsules and the central part of the skull roof. PMID:11523816 TAO:MAH Wikipedia:Neuroranium ZFA:0001580 brain case ZFA:0001580 brain pan http://www.thefreedictionary.com/braincase braincase ZFA:0001580 Subdivision of skeleton which includes upper and lower jaw skeletons. AAO:0000988 BTO:0001749 EMAPA:35455 FMA:54396 GAID:214 MA:0001905 MESH:D007568 NCIT:C48821 SCTID:181811001 TAO:0001227 Wikipedia:Jaw ZFA:0001227 galen:Jaw jaw jaw cartilage mandibular arch skeleton uberon anterior splanchnocranium jaws mandibular arch oral jaw skeleton pharyngeal arch 1 skeleton visceral arch 1 UBERON:0001708 jaw skeleton UBERON:0001708 Subdivision of skeleton which includes upper and lower jaw skeletons. Wikipedia:Jaw https://orcid.org/0000-0002-6601-2165 jaw MA:0001905 jaw cartilage ZFA:0001227 mandibular arch skeleton ZFA:0001227 mandibular arch TAO:0001227 Subdivision of head that consists of the lower jaw skeletal elements plus associated soft tissue (skin, lips, muscle)[cjm]. AAO:0000272 EFO:0003660 EHDAA2:0001018 EHDAA:7995 EMAPA:17906 FMA:59398 MESH:D008334 SCTID:362637005 VHOG:0000453 Wikipedia:Lower_jaw ncithesaurus:Lower_Jaw mandibular part of mouth uberon lower part of mouth mandibular series UBERON:0001710 See notes for jaw w.r.t skeletal element vs subdivision of head lower jaw region UBERON:0001710 Subdivision of head that consists of the lower jaw skeletal elements plus associated soft tissue (skin, lips, muscle)[cjm]. Wikipedia:Lower_jaw mandibular part of mouth FMA:59398 The groups of nerve cell bodies associated with the twelve cranial nerves. UBERON:0003213 UBERON:0026601 BIRNLEX:2597 BTO:0000106 EFO:0000902 EMAPA:16659 FMA:54502 MA:0000213 MA:0000214 MAT:0000200 MIAA:0000200 SCTID:244448001 TAO:0000013 VHOG:0000076 Wikipedia:Cranial_nerve_ganglion XAO:0000027 ZFA:0000013 cranial ganglion cranial ganglion part of peripheral nervous system cranial ganglion/nerve cranial nerve ganglion cranial neural ganglion cranial neural tree organ ganglion ganglion of cranial nerve ganglion of cranial neural tree organ uberon cranial ganglia head ganglion presumptive cranial ganglia UBERON:0001714 cranial ganglion UBERON:0001714 The groups of nerve cell bodies associated with the twelve cranial nerves. ISBN:0-683-40008-8 MGI:csmith MP:0001081 PMID:9362461 cranial ganglion part of peripheral nervous system BIRNLEX:2597 cranial neural tree organ ganglion OBOL:automatic ganglion of cranial nerve FMA:54502 ganglion of cranial neural tree organ OBOL:automatic presumptive cranial ganglia ZFA:0000013 A muscular organ in the floor of the mouth. AAO:0010360 BTO:0001385 CALOHA:TS-1050 EFO:0000833 EHDAA2:0002062 EHDAA:9144 EMAPA:17185 EV:0100058 FMA:54640 GAID:816 MA:0000347 MAT:0000040 MESH:D014059 MIAA:0000040 NCIT:C12422 SCTID:181226008 TAO:0005333 VHOG:0000419 Wikipedia:Tongue XAO:0000446 ZFA:0005333 uberon glossus UBERON:0001723 tongue UBERON:0001723 A muscular organ in the floor of the mouth. FEED:rd https://github.com/obophenotype/uberon/issues/256 glossus Wikipedia:Tongue The cartilaginous joints of the skull; these include sphenoethmoidal synchondrosis, sphenooccipital synchondrosis, sphenopetrosal synchondrosis, petrooccipital synchondrosis, anterior intraoccipital synchondrosis and posterior intraoccipital synchondrosis. EMAPA:35264 FMA:54816 MA:0001502 SCTID:314228003 uberon UBERON:0001725 cranial synchondrosis UBERON:0001725 The cartilaginous joints of the skull; these include sphenoethmoidal synchondrosis, sphenooccipital synchondrosis, sphenopetrosal synchondrosis, petrooccipital synchondrosis, anterior intraoccipital synchondrosis and posterior intraoccipital synchondrosis. http://www.medilexicon.com/medicaldictionary.php?t=87514 BIRNLEX:4102 EMAPA:32777 FMA:54819 MA:0001593 NCIT:C33258 SCTID:368728006 lingual papilla tongue papilla uberon UBERON:0001726 papilla of tongue UBERON:0001726 A specialized receptor organ that is a collection of cells spanning the gustatory epithelium. AAO:0010573 BIRNLEX:4101 BTO:0000989 CALOHA:TS-1015 EMAPA:35850 FMA:54825 GAID:815 MA:0001591 MESH:D013650 NCIT:C96518 SCTID:362099006 TAO:0001074 VHOG:0000130 Wikipedia:Taste_bud XAO:0000445 ZFA:0001074 http://uri.neuinfo.org/nif/nifstd/nifext_14 tastebud uberon taste-bud UBERON:0001727 taste bud UBERON:0001727 A specialized receptor organ that is a collection of cells spanning the gustatory epithelium. http://periowiki.wikispot.org/Taste_bud_histology tastebud Wikipedia:Taste_bud taste-bud Wikipedia:Taste_bud An anatomical space that is enclosed by a pharynx. AAO:0010435 BSA:0000113 BTO:0002097 EMAPA:18381 FMA:54935 SCTID:180543003 XAO:0000105 lumen of pharynx pharyngeal cavity uberon cavitas pharyngis UBERON:0001731 cavity of pharynx UBERON:0001731 An anatomical space that is enclosed by a pharynx. OBOL:automatic cavitas pharyngis BTO:0002097 A continuation of the pharynx that is involved in breathing, sound production, and protecting the trachea against food aspiration. AAO:0000268 BTO:0001208 CALOHA:TS-0532 EFO:0000838 EHDAA2:0004063 EMAPA:18333 EV:0100039 FMA:55097 GAID:108 MA:0000414 MAT:0000187 MESH:D007830 MIAA:0000187 NCIT:C12420 SCTID:181212004 VHOG:0001279 Wikipedia:Larynx XAO:0003081 galen:Larynx uberon UBERON:0001737 larynx UBERON:0001737 A continuation of the pharynx that is involved in breathing, sound production, and protecting the trachea against food aspiration. Wikipedia:Larynx http://orcid.org/0000-0002-6601-2165 The cartilaginous structures that support the larynx. BTO:0003660 EHDAA:8157 EMAPA:18697 FMA:55108 GAID:107 MA:0001758 MESH:D007817 NCIT:C12281 SCTID:263482005 VHOG:0001550 cartilage of larynx larynx cartilage uberon UBERON:0001739 laryngeal cartilage UBERON:0001739 The cartilaginous structures that support the larynx. MP:0002256 cartilage of larynx FMA:55108 larynx cartilage VHOG:0001550 Cranial nerve that branches into the lateral (to body sense organs) and the intestino-accessorial (to the skin, muscles of shoulder, hyoid, larynx, gut, lungs, and heart). AAO:0010475 BAMS:10n BAMS:Xn BIRNLEX:801 BTO:0003472 EFO:0002549 FMA:5731 GAID:721 MA:0001106 MBA:917 MESH:D014630 NCIT:C12812 SCTID:362466001 TAO:0000453 VHOG:0000737 Wikipedia:Vagus_nerve XAO:0003097 ZFA:0000453 galen:VagusNerve tenth cranial nerve vagus vagus X nerve vagus nerve [X] vagus nerve tree uberon CN-X cranial nerve X nerve X pneuomgastric nerve vagal nerve vagus nerve or its root UBERON:0001759 vagus nerve UBERON:0001759 Cranial nerve that branches into the lateral (to body sense organs) and the intestino-accessorial (to the skin, muscles of shoulder, hyoid, larynx, gut, lungs, and heart). ISBN:0471209627 Wikipedia:Vagus_nerve vagus X nerve MA:0001106 nerve X NeuroNames:702 pneuomgastric nerve BTO:0003472 vagus nerve or its root BAMS:10n The space in the eye, filled with aqueous humor, and bounded anteriorly by the cornea and a small portion of the sclera and posteriorly by a small portion of the ciliary body, the iris, and part of the crystalline lens. BTO:0002084 EHDAA2:0000129 EHDAA:9033 EMAPA:18231 FMA:58078 GAID:889 MA:0000262 MESH:D000867 NCIT:C12667 SCTID:181160009 VHOG:0001431 Wikipedia:Anterior_chamber_of_eyeball anterior chamber anterior chamber of eye camera anterior eye anterior chamber uberon camera anterior bulbi camera oculi anterior UBERON:0001766 anterior chamber of eyeball UBERON:0001766 The space in the eye, filled with aqueous humor, and bounded anteriorly by the cornea and a small portion of the sclera and posteriorly by a small portion of the ciliary body, the iris, and part of the crystalline lens. MESH:A09.371.060.067 MP:0005205 anterior chamber HP:0000593 MP:0010709 camera anterior bulbi BTO:0002084 camera oculi anterior BTO:0002084 The pigmented middle of the three concentric layers that make up an eye, consisting of the iris, ciliary body and choroid[WP,edited]. CALOHA:TS-2228 EMAPA:35901 FMA:58103 GAID:912 MA:0002480 MESH:D014602 NCIT:C12811 SCTID:280648000 Wikipedia:Uvea tunica vasculosa of eyeball uvea uveal tract uberon pars iridica retinae tunica vasculatis oculi vascular layer of eyeball UBERON:0001768 uvea UBERON:0001768 The pigmented middle of the three concentric layers that make up an eye, consisting of the iris, ciliary body and choroid[WP,edited]. MP:0005197 Wikipedia:Uvea tunica vasculosa of eyeball FMA:58103 uvea FMA:58103 uveal tract FMA:58103 pars iridica retinae Wikipedia:Uvea tunica vasculatis oculi Wikipedia:Uvea vascular layer of eyeball FMA:58103 The adjustable membrane, composed of the stroma and pigmented epithelium, located just in front of the crystalline lens within the eye. AAO:0010347 BTO:0000653 CALOHA:TS-0491 EFO:0004245 EMAPA:19154 EV:0100345 FMA:58235 GAID:917 MA:0000273 MESH:D007498 NCIT:C12737 SCTID:181164000 TAO:0001238 VHOG:0000101 Wikipedia:Iris_(anatomy) XAO:0000185 ZFA:0001238 uberon anterior uvea UBERON:0001769 iris UBERON:0001769 The adjustable membrane, composed of the stroma and pigmented epithelium, located just in front of the crystalline lens within the eye. ISBN:0-683-40008-8 MP:0001322 The smooth stratified squamous epithelium that covers the outer surface of the cornea. BTO:0000287 CALOHA:TS-0173 EFO:0001917 EHDAA2:0000319 EMAPA:17162 FMA:58263 GAID:895 MA:0001243 MESH:D019573 NCIT:C12928 SCTID:368825001 TAO:0002187 Wikipedia:Corneal_epithelium ZFA:0001683 anterior corneal epithelium cornea epithelial tissue cornea epithelium epithelial tissue of cornea epithelium anterius (cornea) epithelium corneæ anterior layer epithelium of cornea external epithelium of cornea uberon anterior endothelium of cornea endothelium anterius corneae endothelium camerae anterioris bulbi endothelium corneale epithelium posterius corneae UBERON:0001772 corneal epithelium UBERON:0001772 The smooth stratified squamous epithelium that covers the outer surface of the cornea. MESH:A09.371.060.217.325 MGI:smb MP:0006000 cornea epithelial tissue OBOL:automatic cornea epithelium OBOL:automatic epithelial tissue of cornea OBOL:automatic anterior endothelium of cornea BTO:0000287 endothelium anterius corneae BTO:0000287 endothelium camerae anterioris bulbi BTO:0000287 endothelium corneale BTO:0000287 epithelium posterius corneae BTO:0000287 Opaque fibrous outer layer of the eyeball[ZFA,Kardong,WP]. AAO:0010354 BTO:0001606 EMAPA:19027 EV:0100342 FMA:58269 GAID:911 MA:0000280 MESH:D012590 NCIT:C12784 SCTID:181163006 VHOG:0001274 Wikipedia:Sclera XAO:0000183 ZFA:0005563 uberon scleral capsule UBERON:0001773 Disease notes: implicated in rheumatoid arthritis. sclera UBERON:0001773 Opaque fibrous outer layer of the eyeball[ZFA,Kardong,WP]. Wikipedia:Sclera ZFIN:ZDB-PUB-050701-15 A skeletal muscle organ that is part of the trunk region. AAO:0000611 EMAPA:35888 FMA:58274 MA:0000514 TAO:0000473 XAO:0003230 ZFA:0000473 body musculature muscle of trunk muscle organ of torso muscle organ of trunk torso muscle organ trunk muscle trunk muscle organ trunk musculature uberon UBERON:0001774 skeletal muscle of trunk UBERON:0001774 A skeletal muscle organ that is part of the trunk region. http://orcid.org/0000-0002-6601-2165 body musculature ZFA:0000473 muscle of trunk FMA:58274 muscle organ of torso OBOL:automatic muscle organ of trunk OBOL:automatic torso muscle organ OBOL:automatic trunk muscle organ OBOL:automatic The thickened portion of the vascular tunic, which lies between the choroid and the iris, composed of ciliary muscle and ciliary processes. AAO:0010341 BTO:0000260 CALOHA:TS-0694 EMAPA:19065 EV:0100346 FMA:58295 GAID:916 MA:0000264 MESH:D002924 NCIT:C12345 SCTID:263340007 VHOG:0000102 Wikipedia:Ciliary_body XAO:0000186 neuronames:1571 ocular ciliary body uberon anterior uvea UBERON:0001775 ciliary body UBERON:0001775 The thickened portion of the vascular tunic, which lies between the choroid and the iris, composed of ciliary muscle and ciliary processes. ISBN:0-683-40008-8 MP:0005099 Wikipedia:Ciliary_body Vascular layer containing connective tissue, of the eye lying between the retina and the sclera. The choroid provides oxygen and nourishment to the outer layers of the retina. Along with the ciliary body and iris, the choroid forms the uveal tract[WP]. BTO:0001829 CALOHA:TS-2054 EMAPA:19077 EV:0100347 FMA:58298 GAID:913 MA:0000263 MESH:D002829 NCIT:C12344 SCTID:181172003 TAO:0005229 VHOG:0001568 Wikipedia:Choroid ZFA:0005229 choroid choroid coat choroidea eye choroid posterior uvea uberon chorioid optic choroid UBERON:0001776 optic choroid UBERON:0001776 Vascular layer containing connective tissue, of the eye lying between the retina and the sclera. The choroid provides oxygen and nourishment to the outer layers of the retina. Along with the ciliary body and iris, the choroid forms the uveal tract[WP]. Wikipedia:Choroid choroid MA:0000263 choroid coat Wikipedia:Choroid choroidea Wikipedia:Choroid eye choroid VHOG:0001568 posterior uvea Wikipedia:Uvea#Regions chorioid BTO:0001829 optic choroid ZFA:0005229 The lamellated connective tissue of the cornea between the Bowman and Descemet membranes. substantia propria CALOHA:TS-1138 EFO:0002514 EMAPA:17602 FMA:58306 GAID:893 MA:0001245 MESH:D003319 NCIT:C12699 SCTID:362511000 TAO:0002189 Wikipedia:Corneal_stroma ZFA:0001685 corneal stroma stroma of cornea uberon UBERON:0001777 substantia propria of cornea UBERON:0001777 The lamellated connective tissue of the cornea between the Bowman and Descemet membranes. ISBN:0-683-40008-8 MESH:A09.371.060.217.228 MP:0005300 corneal stroma MA:0001245 A double layer covering the ciliary body that produces aqueous humor. BTO:0001770 CALOHA:TS-0695 EMAPA:35239 FMA:58464 MA:0001238 NCIT:C32314 SCTID:280870004 Wikipedia:Ciliary_body#Ciliary_epithelium ciliary body epithelium epithelium of ciliary body ocular ciliary epithelium uberon UBERON:0001778 ciliary epithelium UBERON:0001778 A double layer covering the ciliary body that produces aqueous humor. Wikipedia:Ciliary_body#Ciliary_epithelium ciliary body epithelium FMA:58464 epithelium of ciliary body FMA:58464 The delicate vascular connective tissue that lies between the anterior surface of the iris and the pars iridica retinae. EMAPA:35451 FMA:58526 MA:0002777 SCTID:280882008 Wikipedia:Iris_stroma ZFA:0005569 iridial stroma stroma of iris uberon UBERON:0001779 iris stroma UBERON:0001779 The delicate vascular connective tissue that lies between the anterior surface of the iris and the pars iridica retinae. Wikipedia:Iris_stroma http://www.drugs.com/dict/stroma-of-iris.html The any of the paired peripheral nerves formed by the union of the dorsal and ventral spinal roots from each spinal cord segment[MP,modified]. AAO:0011101 BAMS:spin BTO:0000870 EHDAA2:0001898 EMAPA:16989 FMA:5858 GAID:841 MA:0000233 MESH:D013127 NCIT:C12792 SCTID:361099009 VHOG:0000824 Wikipedia:Spinal_nerve XAO:0003101 neuronames:1228 backbone nerve nerve of backbone nerve of spinal column nerve of spine nerve of vertebral column spinal column nerve spinal nerve tree spine nerve vertebral column nerve uberon UBERON:0001780 spinal nerve UBERON:0001780 The any of the paired peripheral nerves formed by the union of the dorsal and ventral spinal roots from each spinal cord segment[MP,modified]. MESH:A08.800.800.720 MP:0001077 backbone nerve OBOL:automatic nerve of backbone OBOL:automatic nerve of spinal column OBOL:automatic nerve of spine OBOL:automatic nerve of vertebral column OBOL:automatic spinal column nerve OBOL:automatic spine nerve OBOL:automatic vertebral column nerve OBOL:automatic Any of the layers that make up the retina[MP]. AAO:0010353 EMAPA:35742 FMA:58617 MA:0001319 NCIT:C49328 SCTID:280657006 XAO:0000266 retina layer retina neuronal layer retinal layer retinal neuronal layer uberon UBERON:0001781 layer of retina UBERON:0001781 Any of the layers that make up the retina[MP]. MP:0003727 retina neuronal layer MP:0006069 retinal neuronal layer MP:0006069 Cranial nerves are nerves that emerge directly from the brain, in contrast to spinal nerves, which emerge from segments of the spinal cord. AAO:0000108 BAMS:cran BIRNLEX:1623 BTO:0001104 EHDAA2:0000323 EMAPA:17264 FMA:5865 GAID:802 MA:0000215 MBA:967 MESH:D003391 NCIT:C12700 SCTID:244447006 TAO:0000641 VHOG:0000279 Wikipedia:Cranial_nerve XAO:0000429 XAO:0003089 ZFA:0000641 neuronames:1227 cranial neural tree organ uberon cranial nerves UBERON:0001785 cranial nerve UBERON:0001785 Cranial nerves are nerves that emerge directly from the brain, in contrast to spinal nerves, which emerge from segments of the spinal cord. Wikipedia:Cranial_nerve A thick watery refractive medium that fills the space between the lens and the cornea[WP]. EHDAA2:0000139 EHDAA:10196 EMAPA:18232 ENVO:02000024 FMA:58819 GAID:890 MA:0001236 MESH:D001082 NCIT:C13190 SCTID:280587006 VHOG:0000548 Wikipedia:Aqueous_humor ZFA:0005564 aqueous humor aqueous humour uberon UBERON:0001796 aqueous humor of eyeball UBERON:0001796 A thick watery refractive medium that fills the space between the lens and the cornea[WP]. Wikipedia:Aqueous_humor aqueous humour EHDAA2:0000139 The clusters of neurons in the somatic peripheral nervous system which contain the cell bodies of sensory nerve axons, interneurons and non-neuronal supporting cells. AEO:0001000 BTO:0005630 EMAPA:36596 FMA:5885 MA:0002566 MESH:D017950 NCIT:C13060 uberon UBERON:0001800 sensory ganglion UBERON:0001800 The clusters of neurons in the somatic peripheral nervous system which contain the cell bodies of sensory nerve axons, interneurons and non-neuronal supporting cells. MP:0000960 Any of the parts of the eye that lie in front of, or ventral to, the lens (inclusive). EMAPA:36594 FMA:58865 MA:0002484 MESH:D000869 NCIT:C12668 SCTID:280658001 Wikipedia:Anterior_segment_of_eyeball ZFA:0005566 anterior eye segment anterior segment eye anterior segment of eye anterior segment of the eye eye anterior segment segmentum anterius (bulbus oculi) uberon UBERON:0001801 anterior segment of eyeball UBERON:0001801 Any of the parts of the eye that lie in front of, or ventral to, the lens (inclusive). ISBN:0-683-40008-8 MESH:A09.371.060 MP:0005193 anterior segment eye ZFA:0005566 Any of the parts of the eye that lie in back of, or dorsal to, the lens (but not inclusive). EMAPA:36595 FMA:58868 MA:0002485 NCIT:C12906 SCTID:280659009 Wikipedia:Posterior_segment_of_eyeball ZFA:0005567 eye posterior segment posterior eye segment posterior segment eye posterior segment of eye posterior segment of the eye segmentum posterius (bulbus oculi) uberon UBERON:0001802 posterior segment of eyeball UBERON:0001802 Any of the parts of the eye that lie in back of, or dorsal to, the lens (but not inclusive). ISBN:0-683-40008-8 MP:0005195 posterior segment eye ZFA:0005567 A layer of epithelial cells that is part of the eye. BTO:0001873 CALOHA:TS-0543 EMAPA:32871 FMA:58871 MA:0001301 SCTID:362523006 TAO:0001326 Wikipedia:Lens_(anatomy)#Lens_Epithelium XAO:0004094 ZFA:0001326 epithelial tissue of eye lens epithelial tissue of lens epithelium of eye lens eye lens epithelial tissue eye lens epithelium lens epithelial tissue lens epithelium uberon UBERON:0001803 epithelium of lens UBERON:0001803 A layer of epithelial cells that is part of the eye. http://orcid.org/0000-0002-6601-2165 epithelial tissue of eye lens OBOL:automatic epithelial tissue of lens OBOL:automatic epithelium of eye lens OBOL:automatic eye lens epithelial tissue OBOL:automatic eye lens epithelium OBOL:automatic lens epithelial tissue OBOL:automatic The elastic, clear, membrane-like structure, that is outer most layer of the lens. EHDAA2:0000977 EMAPA:18237 FMA:58881 MA:0001300 NCIT:C32975 SCTID:244500004 VHOG:0000550 Wikipedia:Lens_(anatomy)#Lens_capsule ZFA:0005574 lens capsule uberon UBERON:0001804 capsule of lens UBERON:0001804 The elastic, clear, membrane-like structure, that is outer most layer of the lens. MGI:smb MP:0003236 PMID:15483628 Ganglion that has dendrites that form a junction between autonomic nerves originating from the central nervous system and autonomic nerves innervating their target organs in the periphery. There are two subtypes, sympathetic ganglion and parasympathetic ganglion. AEO:0001001 CALOHA:TS-2340 EMAPA:18221 FMA:5889 MA:0000220 MESH:D005725 NCIT:C12720 Wikipedia:Autonomic_ganglion autonomic nervous system ganglion ganglion of autonomic nervous system ganglion of visceral nervous system visceral nervous system ganglion uberon UBERON:0001805 autonomic ganglion UBERON:0001805 Ganglion that has dendrites that form a junction between autonomic nerves originating from the central nervous system and autonomic nerves innervating their target organs in the periphery. There are two subtypes, sympathetic ganglion and parasympathetic ganglion. Wikipedia:Autonomic_ganglion autonomic nervous system ganglion OBOL:automatic ganglion of autonomic nervous system OBOL:automatic ganglion of visceral nervous system OBOL:automatic visceral nervous system ganglion OBOL:automatic A ganglion of the sympathetic nervous system. Examples: paravertebral and the prevertebral ganglia, which include the sympathetic chain ganglia, the superior, middle, and inferior cervical ganglia, and the aorticorenal, celiac, and stellate ganglia. AAO:0010773 BTO:0001333 CALOHA:TS-0994 EHDAA2:0001969 EMAPA:17157 FMA:5890 MA:0000226 NCIT:C12467 SCTID:362485003 Wikipedia:Sympathetic_ganglion ganglion of sympathetic nervous system ganglion of sympathetic part of autonomic division of nervous system ganglion sympatheticum sympathetic nervous system ganglion sympathetic part of autonomic division of nervous system ganglion uberon UBERON:0001806 sympathetic ganglion UBERON:0001806 A ganglion of the sympathetic nervous system. Examples: paravertebral and the prevertebral ganglia, which include the sympathetic chain ganglia, the superior, middle, and inferior cervical ganglia, and the aorticorenal, celiac, and stellate ganglia. MP:0001008 http://orcid.org/0000-0002-6601-2165 ganglion of sympathetic nervous system OBOL:automatic ganglion of sympathetic part of autonomic division of nervous system OBOL:automatic sympathetic nervous system ganglion OBOL:automatic sympathetic part of autonomic division of nervous system ganglion OBOL:automatic Ganglion containing neurons that receive innervation from parasympathetic neurons in the central nervous system and subserves parasympathetic functions through innervation of smooth muscle, cardiac muscle and glands. BTO:0001256 EHDAA2:0001400 EMAPA:32813 FMA:5894 MA:0002469 NCIT:C52557 NLXANAT:100303 SCTID:279284004 Wikipedia:Parasympathetic_ganglion uberon UBERON:0001808 parasympathetic ganglion UBERON:0001808 Ganglion containing neurons that receive innervation from parasympathetic neurons in the central nervous system and subserves parasympathetic functions through innervation of smooth muscle, cardiac muscle and glands. NLXANAT:100303 The mucous lining of the larynx, which is composed of squamous epithelium in the upper larynx and ciliated columnar epithelium in the lower larynx. EMAPA:18334 FMA:59662 GAID:301 MA:0001766 MESH:D007820 NCIT:C49246 SCTID:361940006 laryngeal mucosa larynx mucosa larynx mucosa of organ larynx mucous membrane larynx organ mucosa mucosa of organ of larynx mucous membrane of larynx organ mucosa of larynx uberon laryngeal mucous membrane UBERON:0001824 mucosa of larynx UBERON:0001824 The mucous lining of the larynx, which is composed of squamous epithelium in the upper larynx and ciliated columnar epithelium in the lower larynx. MP:0002261 larynx mucosa of organ OBOL:automatic larynx mucous membrane OBOL:automatic larynx organ mucosa OBOL:automatic mucosa of organ of larynx OBOL:automatic organ mucosa of larynx OBOL:automatic laryngeal mucous membrane EMAPA:18334 One of the two fleshy folds which surround the opening of the mouth. BTO:0001647 CALOHA:TS-0558 EMAPA:32839 FMA:59816 GAID:76 MA:0000343 MESH:D008046 NCIT:C12220 SCTID:181221003 TAO:0007006 VHOG:0000677 Wikipedia:Lip ZFA:0007006 galen:Lip uberon lips UBERON:0001833 lip UBERON:0001833 One of the two fleshy folds which surround the opening of the mouth. Wikipedia:Lip http://www.medterms.com/script/main/art.asp?articlekey=9458 Lip that covers the lower portion of the mouth.[TAO]. UBERON:0003392 EMAPA:17909 FMA:59818 MA:0000921 NCIT:C94572 SCTID:245777007 TAO:0002060 Wikipedia:Lower_lip ZFA:0005225 lower jaw lip uberon UBERON:0001835 lower lip UBERON:0001835 Lip that covers the lower portion of the mouth.[TAO]. TAO:0002060 Wikipedia:Lower_lip lower jaw lip https://orcid.org/0000-0002-6601-2165 One of two bilateral, largely symmetrical organ subdivisions within the telencephalon which contain the cerebral cortex and cerebral white matter.[FMA]. AAO:0010480 BAMS:HEM BIRNLEX:1042 BTO:0000231 CALOHA:TS-2007 DMBA:15739 EFO:0002521 EMAPA:16653 FMA:61817 MA:0000133 MBA:403 NCIT:C12351 SCTID:278251007 VHOG:0001639 Wikipedia:Cerebral_hemisphere galen:CerebralHemisphere uberon cerebrum hemisphere hemispheric regions medial amygdalar nucleus UBERON:0001869 cerebral hemisphere UBERON:0001869 One of two bilateral, largely symmetrical organ subdivisions within the telencephalon which contain the cerebral cortex and cerebral white matter.[FMA]. FMA:61817 Wikipedia:Cerebral_hemisphere cerebrum MA:0000133 VHOG:0001639 https://github.com/obophenotype/uberon/issues/1208 hemisphere VHOG:0001639 hemispheric regions BAMS:HEM medial amygdalar nucleus NeuroNames:241 A nerve that arises from the caudal cervical nerves and is primarily the motor nerve of the diaphragm but also sends sensory fibers to the pericardium. BAMS:phn BTO:0001063 EHDAA:4677 EMAPA:17813 FMA:6191 GAID:848 MA:0001170 MESH:D010791 NCIT:C52813 SCTID:280344009 VHOG:0000728 Wikipedia:Phrenic_nerve uberon diaphragmatic nerve phrenic UBERON:0001884 phrenic nerve UBERON:0001884 A nerve that arises from the caudal cervical nerves and is primarily the motor nerve of the diaphragm but also sends sensory fibers to the pericardium. VHOG:0000728 diaphragmatic nerve BTO:0001063 phrenic BTO:0001063 The most anterior region of the brain including both the telencephalon and diencephalon. AAO:0010147 BAMS:FB BAMS:Forebrain BIRNLEX:1509 BTO:0000478 CALOHA:TS-0380 DHBA:10156 DMBA:15566 EFO:0000909 EHDAA2:0000556 EHDAA:3470 EMAPA:16895 FMA:61992 MA:0000170 MAT:0000105 MESH:D016548 MIAA:0000105 NCIT:C40185 SCTID:362291003 TAO:0000109 VHOG:0000383 Wikipedia:Forebrain XAO:0000011 ZFA:0000109 uberon prosencephalon UBERON:0001890 forebrain UBERON:0001890 The most anterior region of the brain including both the telencephalon and diencephalon. Wikipedia:Forebrain ZFIN:ZDB-PUB-961014-576 The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles)[GO]. AAO:0010149 BAMS:MES BIRNLEX:1667 BM:MB BTO:0000138 CALOHA:TS-0630 DHBA:10648 DMBA:16649 EFO:0000919 EHDAA2:0001162 EHDAA:3694 EMAPA:16974 EV:0100242 FMA:61993 HBA:9001 MA:0000207 MAT:0000106 MBA:313 MESH:D008636 MIAA:0000106 NCIT:C12510 RETIRED_EHDAA2:0001104 SCTID:279099009 TAO:0000128 VHOG:0000069 Wikipedia:Midbrain XAO:0000014 ZFA:0000128 uberon UBERON:0001891 midbrain UBERON:0001891 The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles)[GO]. GO:0030901 A segment of the developing hindbrain[ZFA]. In the vertebrate embryo, a rhombomere is a transiently divided segment of the developing neural tube, within the hindbrain region (a neuromere) in the area that will eventually become the rhombencephalon. The rhombomeres appear as a series of slightly constricted swellings in the neural tube, caudal to the cephalic flexure.[WP]. hindbrain segment segment of hindbrain DHBA:12664 EFO:0003617 EMAPA:16148 FMA:295666 MAT:0000272 MIAA:0000272 RETIRED_EHDAA2:0000669 TAO:0001064 VHOG:0000672 Wikipedia:Rhombomere XAO:0004079 ZFA:0001064 hindbrain neuromere rhombomere uberon future rhombencephalon UBERON:0001892 rhombomere UBERON:0001892 A segment of the developing hindbrain[ZFA]. In the vertebrate embryo, a rhombomere is a transiently divided segment of the developing neural tube, within the hindbrain region (a neuromere) in the area that will eventually become the rhombencephalon. The rhombomeres appear as a series of slightly constricted swellings in the neural tube, caudal to the cephalic flexure.[WP]. Wikipedia:Rhombomere ZFIN:curator hindbrain segment ZFA:0001064 segment of hindbrain ZFA:0001064 future rhombencephalon MIAA:0000272 Part of the forebrain consisting of paired olfactory bulbs and cerebral hemispheres. supratentorial region AAO:0010479 BAMS:CB BAMS:CH BAMS:IV BAMS:Tel BIRNLEX:1115 BM:Tel BTO:0000239 CALOHA:TS-1018 DHBA:10158 EFO:0000912 EHDAA2:0001982 EMAPA:16910 EV:0100165 FMA:62000 GAID:621 HBA:4007 MA:0000183 MAT:0000421 MBA:567 MESH:D013687 MIAA:0000421 PBA:128011350 SCTID:263353005 TAO:0000079 VHOG:0000283 Wikipedia:Telencephalon XAO:0000012 ZFA:0000079 cerebrum endbrain uberon UBERON:0001893 telencephalon UBERON:0001893 Part of the forebrain consisting of paired olfactory bulbs and cerebral hemispheres. AAO:0010479 XAO:0000012 supratentorial region Wikipedia:Tentorium_cerebelli cerebrum BTO:0000239 EMAPA:16910 FMA:62000 Wikipedia:Talk:Cerebrum/Archive_1 https://github.com/obophenotype/uberon/issues/1208 endbrain Swanson:2004 neuronames:31 The division of the forebrain that develops from the foremost primary cerebral vesicle. AAO:0010481 BAMS:DI BAMS:Di BAMS:DiE BAMS:IB BAMS:Zh. BIRNLEX:1503 BM:Die BTO:0000342 CALOHA:TS-0199 DHBA:10389 DMBA:16308 EFO:0000911 EHDAA2:0000385 EHDAA:1969 EHDAA:2645 EHDAA:3472 EMAPA:16896 EV:0100194 FMA:62001 GAID:618 HBA:4391 MA:0000171 MAT:0000420 MBA:1129 MESH:D004027 MIAA:0000420 NCIT:C12456 PBA:128013010 SCTID:279328001 TAO:0000101 VHOG:0000318 Wikipedia:Diencephalon XAO:0000013 ZFA:0000101 between brain interbrain mature diencephalon thalamencephalon uberon betweenbrain UBERON:0001894 diencephalon UBERON:0001894 The division of the forebrain that develops from the foremost primary cerebral vesicle. Wikipedia:Diencephalon interbrain Swanson:2004 mature diencephalon FMA:62001 thalamencephalon MGI:anna betweenbrain BTO:0000342 Rostral segment of the hindbrain that has as its parts the pons (where present) and the cerebellum[WP,modified]. BAMS:Met BIRNLEX:965 BTO:0000673 CALOHA:TS-2029 DHBA:10655 EHDAA2:0001149 EHDAA:5498 EMAPA:17071 FMA:62003 GAID:594 HBA:4833 MA:0000197 MESH:D020540 NCIT:C32741 VHOG:0000741 Wikipedia:Metencephalon epencephalon-2 uberon UBERON:0001895 the terms metencephalon and myelencephalon are only meaningful in mammals and birds[Neuroanatomy of the Zebrafish Brain]. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata and thus these are not distinguished in ZFA[ZFA]. metencephalon UBERON:0001895 Rostral segment of the hindbrain that has as its parts the pons (where present) and the cerebellum[WP,modified]. Wikipedia:Metencephalon https://github.com/obophenotype/uberon/issues/300 epencephalon-2 FMA:62003 Organ component of neuraxis that has as its parts the medullary reticular formation, inferior olivary complex and cochlear nuclear complex, among other structures[FMA]. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate[GO]. bulb medulla AAO:0010486 BAMS:MY BAMS:Md BIRNLEX:957 BM:Me BTO:0000041 CALOHA:TS-0607 DMBA:17352 EFO:0000924 EHDAA2:0001088 EHDAA:7588 EMAPA:17550 EV:0100275 FMA:62004 GAID:590 MA:0000206 MAT:0000111 MAT:0000367 MBA:354 MESH:D008526 MIAA:0000111 NCIT:C12442 SCTID:279104005 TAO:0000545 VHOG:0000181 Wikipedia:Bone_marrow_of_ovary_oblongata XAO:0003100 ZFA:0000545 uberon metepencephalon UBERON:0001896 medulla oblongata UBERON:0001896 Organ component of neuraxis that has as its parts the medullary reticular formation, inferior olivary complex and cochlear nuclear complex, among other structures[FMA]. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate[GO]. FMA:62004 GO:0021550 Wikipedia:Bone_marrow_of_ovary_oblongata medulla ABA:MY metepencephalon FMA:62004 The epithelial lining of the trachea which contains numerous ciliated cells. UBERON:0003227 BTO:0001389 CALOHA:TS-1061 EHDAA2:0002069 EHDAA:5007 EMAPA:16855 EMAPA:18409 FMA:62015 MA:0001862 NCIT:C33797 VHOG:0001045 epithelial tissue of trachea epithelial tissue of windpipe epithelium of windpipe trachea epithelial tissue trachea epithelium tracheal epithelium windpipe epithelial tissue windpipe epithelium uberon UBERON:0001901 epithelium of trachea UBERON:0001901 The epithelial lining of the trachea which contains numerous ciliated cells. ISBN:0-397-51047-0 MGI:cwg MP:0002285 epithelial tissue of trachea OBOL:automatic epithelial tissue of windpipe OBOL:automatic epithelium of windpipe OBOL:automatic trachea epithelial tissue OBOL:automatic windpipe epithelial tissue OBOL:automatic windpipe epithelium OBOL:automatic An endothelium that is part of a capillary [Automatically generated definition]. BTO:0004954 CALOHA:TS-0112 EMAPA:36292 FMA:62114 MA:0000711 NCIT:C49215 blood capillary endothelium capillary endothelium capillary vessel endothelium endothelium of blood capillary endothelium of capillary vessel uberon UBERON:0001915 endothelium of capillary UBERON:0001915 An endothelium that is part of a capillary [Automatically generated definition]. OBOL:automatic blood capillary endothelium OBOL:automatic capillary vessel endothelium OBOL:automatic endothelium of blood capillary OBOL:automatic endothelium of capillary vessel OBOL:automatic An endothelium that is part of an arteriole [Automatically generated definition]. EMAPA:36286 FMA:62115 MA:0000705 NCIT:C49192 arteriole endothelium uberon UBERON:0001916 endothelium of arteriole UBERON:0001916 An endothelium that is part of an arteriole [Automatically generated definition]. OBOL:automatic An endothelium that is part of an artery [Automatically generated definition]. AAO:0011013 BTO:0004757 EMAPA:35148 FMA:62116 MA:0000707 NCIT:C49194 VHOG:0001215 XAO:0000357 arterial endothelium artery endothelium uberon UBERON:0001917 endothelium of artery UBERON:0001917 An endothelium that is part of an artery [Automatically generated definition]. OBOL:automatic An endothelium that is part of a venule [Automatically generated definition]. EMAPA:36290 FMA:62117 MA:0000716 NCIT:C49319 venule endothelium uberon UBERON:0001918 endothelium of venule UBERON:0001918 An endothelium that is part of a venule [Automatically generated definition]. OBOL:automatic An endothelium that is part of a vein [Automatically generated definition]. AAO:0011110 BTO:0004756 EMAPA:36288 FMA:62118 MA:0000712 NCIT:C49317 VHOG:0001216 XAO:0000358 vein endothelium venous endothelium uberon veinous endothelium UBERON:0001919 endothelium of vein UBERON:0001919 An endothelium that is part of a vein [Automatically generated definition]. OBOL:automatic veinous endothelium VHOG:0001216 Ventral part of the midbrain, separated from the hindbrain by the isthmus[ISBN:0471888893]. Subdivision of the midbrain lying anterior to the tectum and posterior to the substantia nigra and cerebral peduncle[FMA] The part of the midbrain extending from the substantia nigra to the cerebral aqueduct in a horizontal section of the midbrain. It forms the floor of the midbrain that surrounds the cerebral aqueduct[WP]. tegmentum BAMS:MTg BIRNLEX:1200 BTO:0003388 DHBA:12195 EFO:0000921 EHDAA2:0004475 EMAPA:18215 FMA:62393 HBA:9002 MA:0000212 MAT:0000452 SCTID:362392007 TAO:0000160 VHOG:0001367 Wikipedia:Midbrain_tegmentum XAO:0004271 ZFA:0000160 tegmentum of midbrain uberon mesencephalic tegmentum UBERON:0001943 'tegmentum' is used generically for the ventral part of the brainstem (ISBN:0471888893). We use the label 'midbrain tegmentum' to denote the midbrain structure. In NIFSTD tegmentum is a composite structure and there is a separate class for midbrain tegmentum and pontine tegmentum midbrain tegmentum UBERON:0001943 Ventral part of the midbrain, separated from the hindbrain by the isthmus[ISBN:0471888893]. Subdivision of the midbrain lying anterior to the tectum and posterior to the substantia nigra and cerebral peduncle[FMA] The part of the midbrain extending from the substantia nigra to the cerebral aqueduct in a horizontal section of the midbrain. It forms the floor of the midbrain that surrounds the cerebral aqueduct[WP]. FMA:FMA ISBN:0471888893 Wikipedia:Midbrain_tegmentum tegmentum ISBN:0471888893 mesencephalic tegmentum VHOG:0001367 A multi-tissue structure that is part of a spinal cord. BIRNLEX:1496 NCIT:C33969 SCTID:244437008 uberon spinal cord part UBERON:0001948 regional part of spinal cord UBERON:0001948 A multi-tissue structure that is part of a spinal cord. OBOL:automatic An area of cerebral cortex defined on the basis of cytoarchitecture that have six layers. Starting from the cortical surface the layers are: molecular layer (I), external granular layer (II), external pyramidal layer (III), internal granular layer (IV), internal pyramidal layer (V), and multiform layer (VI). Neocortex is most prominent in the frontal lobe, the parietal lobe, the temporal lobe and the occipital lobe, less so in the cingulate gyrus, the parahippocampal gyrus and the insula. It is composed of two subdivisions: true isocortex and proisocortex (Carpenter-83)(NN). BAMS:ISO BAMS:Iso-cortex BAMS:NCX BIRNLEX:2547 BTO:0000920 DHBA:10160 EHDAA2:0004662 EMAPA:32842 EMAPA:35589 FMA:62429 GAID:677 MA:0002754 MBA:315 MESH:D019579 PBA:294021746 Wikipedia:Neocortex cerebral neocortex homotypical cortex isocortex (sensu lato) neocortex (isocortex) neopallial cortex neopallium isocortex uberon iso-cortex nonolfactory cortex UBERON:0001950 neocortex UBERON:0001950 An area of cerebral cortex defined on the basis of cytoarchitecture that have six layers. Starting from the cortical surface the layers are: molecular layer (I), external granular layer (II), external pyramidal layer (III), internal granular layer (IV), internal pyramidal layer (V), and multiform layer (VI). Neocortex is most prominent in the frontal lobe, the parietal lobe, the temporal lobe and the occipital lobe, less so in the cingulate gyrus, the parahippocampal gyrus and the insula. It is composed of two subdivisions: true isocortex and proisocortex (Carpenter-83)(NN). BIRNLEX:2547 OldNeuroNames:754 homotypical cortex BIRNLEX:2547 isocortex (sensu lato) FMA:62429 neocortex (isocortex) DHBA:10160 isocortex BRAINSPAN:BRAINSPAN iso-cortex BAMS:iso-cortex nonolfactory cortex BTO:0000920 The hyaline cartilaginous structures that support the bronchi, present as irregular rings in the larger bronchi (and not as regular as in the trachea), and as small plates and islands in the smaller bronchi; as the branching continues through the bronchial tree, the amount of hyaline cartilage in the walls decreases until it is absent in the smallest bronchioles[MP]. EMAPA:35192 FMA:62649 MA:0001835 NCIT:C49209 SCTID:278980009 bronchi cartilage bronchial cartilage bronchial cartilage ring bronchial trunk cartilage bronchus cartilage cartilage of bronchi cartilage of bronchial trunk uberon UBERON:0001956 cartilage of bronchus UBERON:0001956 The hyaline cartilaginous structures that support the bronchi, present as irregular rings in the larger bronchi (and not as regular as in the trachea), and as small plates and islands in the smaller bronchi; as the branching continues through the bronchial tree, the amount of hyaline cartilage in the walls decreases until it is absent in the smallest bronchioles[MP]. MP:0010988 bronchi cartilage OBOL:automatic bronchial cartilage ring MP:0010988 bronchial trunk cartilage OBOL:automatic cartilage of bronchi OBOL:automatic cartilage of bronchial trunk OBOL:automatic A submucosa that is part of a bronchus [Automatically generated definition]. BTO:0002108 FMA:62653 MA:0001837 NCIT:C49214 SCTID:85546005 bronchi submucosa bronchial submucosa bronchial trunk submucosa bronchus submucosa submucosa of bronchi submucosa of bronchial trunk uberon submucous layer of bronchi UBERON:0001957 submucosa of bronchus UBERON:0001957 A submucosa that is part of a bronchus [Automatically generated definition]. OBOL:automatic bronchi submucosa OBOL:automatic bronchial trunk submucosa OBOL:automatic submucosa of bronchi OBOL:automatic submucosa of bronchial trunk OBOL:automatic submucous layer of bronchi BTO:0002108 The liquid component of blood, in which erythrocytes are suspended. plasma portion of plasma BTO:0000131 CALOHA:TS-0800 EFO:0001905 EMAPA:35690 FMA:62970 GAID:1178 MA:0002501 MAT:0000052 MESH:D010949 MIAA:0000052 NCIT:C13356 Wikipedia:Blood_plasma blood plasm portion of blood plasma uberon UBERON:0001969 blood plasma UBERON:0001969 The liquid component of blood, in which erythrocytes are suspended. http://orcid.org/0000-0002-6601-2165 plasma MA:0002501 portion of plasma FMA:62970 BTO:0000501 FMA:62972 GAID:1160 MA:0002519 MESH:D005750 NCIT:C32661 Wikipedia:Gastric_juice galen:GastricJuice stomach secretion uberon succus gastricus UBERON:0001971 gastric juice UBERON:0001971 succus gastricus BTO:0000501 A submucosa that is part of a esophagus [Automatically generated definition]. BTO:0002109 EMAPA:35325 FMA:62997 MA:0002724 SCTID:362128009 esophageal submucosa esophagus submucosa gullet submucosa oesophagus submucosa submucosa of esophagus submucosa of gullet submucosa of oesophagus tela submucosa of esophagus uberon submucous layer of esophagus tela submucosa oesophagi UBERON:0001972 submucosa of esophagus UBERON:0001972 A submucosa that is part of a esophagus [Automatically generated definition]. OBOL:automatic gullet submucosa OBOL:automatic oesophagus submucosa OBOL:automatic submucosa of gullet OBOL:automatic submucosa of oesophagus OBOL:automatic submucous layer of esophagus BTO:0002109 tela submucosa oesophagi BTO:0002109 A lamina propria that is part of a esophagus [Automatically generated definition]. EMAPA:26987 FMA:63050 MA:0001568 NCIT:C49223 esophagus lamina propria esophagus lamina propria mucosa esophagus lamina propria mucosae gullet lamina propria gullet lamina propria mucosa gullet lamina propria mucosae lamina propria mucosa of esophagus lamina propria mucosa of gullet lamina propria mucosa of oesophagus lamina propria mucosae of esophagus lamina propria mucosae of gullet lamina propria mucosae of oesophagus lamina propria of gullet lamina propria of oesophagus oesophagus lamina propria mucosa oesophagus lamina propria mucosae uberon esophageal lamina propria oesophagus lamina propria UBERON:0001974 lamina propria of esophagus UBERON:0001974 A lamina propria that is part of a esophagus [Automatically generated definition]. OBOL:automatic esophagus lamina propria mucosa OBOL:automatic esophagus lamina propria mucosae OBOL:automatic gullet lamina propria OBOL:automatic gullet lamina propria mucosa OBOL:automatic gullet lamina propria mucosae OBOL:automatic lamina propria mucosa of esophagus OBOL:automatic lamina propria mucosa of gullet OBOL:automatic lamina propria mucosa of oesophagus OBOL:automatic lamina propria mucosae of gullet OBOL:automatic lamina propria mucosae of oesophagus OBOL:automatic lamina propria of gullet OBOL:automatic lamina propria of oesophagus OBOL:automatic oesophagus lamina propria mucosa OBOL:automatic oesophagus lamina propria mucosae OBOL:automatic esophageal lamina propria EMAPA:26987 A serous membrane that is part of a esophagus [Automatically generated definition]. EMAPA:35322 FMA:63057 MA:0001571 esophagus serosa esophagus serous membrane gullet serosa gullet serous membrane oesophagus serous membrane serosa of abdominal part of esophagus serosa of gullet serosa of oesophagus serous coat of oesophagus serous membrane of esophagus serous membrane of gullet serous membrane of oesophagus uberon oesophagus serosa UBERON:0001975 serosa of esophagus UBERON:0001975 A serous membrane that is part of a esophagus [Automatically generated definition]. OBOL:automatic esophagus serous membrane OBOL:automatic gullet serosa OBOL:automatic gullet serous membrane OBOL:automatic oesophagus serous membrane OBOL:automatic serosa of gullet OBOL:automatic serous membrane of esophagus OBOL:automatic serous membrane of gullet OBOL:automatic serous membrane of oesophagus OBOL:automatic The epithelial layer that lines the luminal space of the esophagus. BTO:0001578 CALOHA:TS-0698 EFO:0003041 EHDAA2:0001287 EMAPA:16835 FMA:63063 MA:0001565 NCIT:C49221 TAO:0001499 ZFA:0001499 epithelial tissue of esophagus epithelial tissue of gullet epithelial tissue of oesophagus epithelium of gullet epithelium of oesophagus esophageal epithelium esophagus epithelial tissue esophagus epithelium gullet epithelial tissue gullet epithelium oesophagus epithelial tissue uberon oesophagus epithelium UBERON:0001976 epithelium of esophagus UBERON:0001976 The epithelial layer that lines the luminal space of the esophagus. ISBN:0-683-40008-8 MP:0000468 epithelial tissue of esophagus OBOL:automatic epithelial tissue of gullet OBOL:automatic epithelial tissue of oesophagus OBOL:automatic epithelium of gullet OBOL:automatic epithelium of oesophagus OBOL:automatic esophagus epithelial tissue OBOL:automatic gullet epithelial tissue OBOL:automatic gullet epithelium OBOL:automatic oesophagus epithelial tissue OBOL:automatic One of the minute vessels that collect deoxygenated blood from the capillary plexuses returns it to the veins. BTO:0002626 EMAPA:35917 FMA:63130 MA:0000071 MESH:D014699 NCIT:C12818 SCTID:341687009 TAO:0005315 VHOG:0001765 Wikipedia:Venule ZFA:0005315 uberon UBERON:0001979 venule UBERON:0001979 One of the minute vessels that collect deoxygenated blood from the capillary plexuses returns it to the veins. MESH:A07.231.432.952 MP:0004125 The smallest division of the artery located between the muscular arteries and the capillaries[GO]. AAO:0010253 BTO:0001997 EMAPA:35146 FMA:63182 MA:0000063 MESH:D001160 NCIT:C12672 SCTID:337724002 TAO:0002138 VHOG:0001763 Wikipedia:Arteriole ZFA:0005255 uberon UBERON:0001980 arteriole UBERON:0001980 The smallest division of the artery located between the muscular arteries and the capillaries[GO]. GO:0014830 A vessel through which blood circulates in the body. vascular element AAO:0011004 AEO:0000207 BTO:0001102 CALOHA:TS-0080 EFO:0000817 EHDAA2:0003252 EHDAA:240 EMAPA:32743 EMAPA:35993 FMA:50722 FMA:63183 GAID:169 MA:0000060 MAT:0000393 MESH:D001808 NCIT:C12679 NLXANAT:090901 SCTID:361097006 TAO:0002137 VHOG:0001250 Wikipedia:Blood_vessel XAO:0001011 ZFA:0005314 region of vascular tree organ vascular tree organ region uberon UBERON:0001981 blood vessel UBERON:0001981 A vessel through which blood circulates in the body. BTO:0001102 Wikipedia:Blood_vessel vascular element EMAPA:35993 region of vascular tree organ FMA:50722 vascular tree organ region FMA:50722 Any of the smallest blood vessels connecting arterioles with venules. AAO:0010252 BTO:0002045 CALOHA:TS-2006 EFO:0001906 EMAPA:35198 EV:0100035 FMA:63194 MA:0000065 MESH:D002196 NCIT:C12685 NLXANAT:090902 TAO:0005250 VHOG:0001253 Wikipedia:Capillary XAO:0000116 ZFA:0005250 blood capillary capillary vessel uberon UBERON:0001982 capillary UBERON:0001982 Any of the smallest blood vessels connecting arterioles with venules. ISBN:0073040584 Wikipedia:Capillary https://github.com/obophenotype/uberon/issues/137 A monolayer of specialized, flattened, mitochondria-rich cells that lines the posterior surface of the cornea and faces the anterior chamber of the eye[WP]. CALOHA:TS-0172 EMAPA:35935 FMA:63882 GAID:891 MA:0001242 MESH:D004728 NCIT:C12707 SCTID:368827009 TAO:0002186 Wikipedia:Corneal_endothelium ZFA:0001687 cornea endothelium endothelium of cornea uberon UBERON:0001985 corneal endothelium UBERON:0001985 A monolayer of specialized, flattened, mitochondria-rich cells that lines the posterior surface of the cornea and faces the anterior chamber of the eye[WP]. Wikipedia:Corneal_endothelium cornea endothelium OBOL:automatic endothelium of cornea OBOL:automatic A layer of epithelium that lines the heart, blood vessels (endothelium, vascular), lymph vessels (endothelium, lymphatic), and the serous cavities of the body[MESH]. Simple squamous epithelium which lines blood and lymphatic vessels and the heart[FMA]. BTO:0000393 CALOHA:TS-0278 EFO:0002548 FMA:63916 GAID:520 MESH:D004727 NCIT:C12481 SCTID:27168002 galen:Endothelium uberon UBERON:0001986 The term 'endothelium' has been either restricted to the continuous cell layer of the vertebrates, as we are assuming here, or applied to all the cells able to adhere to the luminal surface of the vascular basement membrane (Casley-Smith 1980) endothelium UBERON:0001986 A layer of epithelium that lines the heart, blood vessels (endothelium, vascular), lymph vessels (endothelium, lymphatic), and the serous cavities of the body[MESH]. Simple squamous epithelium which lines blood and lymphatic vessels and the heart[FMA]. FMA:63916 MESH:A10.272.491 https://github.com/obophenotype/uberon/issues/225 Cartilage tissue primarily composed of type II collagen (thin fibrils) and a glassy appearance. EMAPA:35414 FMA:64783 MA:0000109 NCIT:C32746 SCTID:39298000 VSAO:0000094 Wikipedia:Hyaline_cartilage XAO:0004029 hyaline cartilage uberon chondroid cartilage UBERON:0001994 hyaline cartilage tissue UBERON:0001994 Cartilage tissue primarily composed of type II collagen (thin fibrils) and a glassy appearance. GO_REF:0000034 PSPUB:0000170 VSAO:0000094 http://dx.plos.org/10.1371/journal.pone.0051070 hyaline cartilage MA:0000109 chondroid cartilage http://orcid.org/0000-0002-6601-2165 An artery that carries deoxygenated blood from heart to the lungs. They are the only arteries (other than umbilical arteries in the fetus) that carry deoxygenated blood.. AAO:0010221 BTO:0000778 CALOHA:TS-0839 EFO:0001399 EHDAA2:0001575 EHDAA:4351 EMAPA:17008 FMA:66326 GAID:505 MA:0002031 MESH:D011651 NCIT:C12774 SCTID:181380003 VHOG:0000982 Wikipedia:Pulmonary_artery XAO:0004162 galen:PulmonaryArtery pulmonary arterial tree pulmonary arterial tree organ part uberon pulmonary arterial subtree UBERON:0002012 pulmonary artery UBERON:0002012 An artery that carries deoxygenated blood from heart to the lungs. They are the only arteries (other than umbilical arteries in the fetus) that carry deoxygenated blood.. Wikipedia:Pulmonary_artery http://orcid.org/0000-0002-6601-2165 pulmonary arterial tree FMA:66326 pulmonary arterial tree organ part FMA:66326 pulmonary arterial subtree FMA:66326 Pulmonary veins are blood vessels that transport blood from the lungs to the heart[GO]. AAO:0010521 BTO:0001799 CALOHA:TS-0840 EHDAA2:0001579 EHDAA:2629 EMAPA:18645 FMA:66643 GAID:543 MA:0002206 MESH:D011667 NCIT:C12776 SCTID:430160002 VHOG:0001133 Wikipedia:Pulmonary_vein XAO:0000394 galen:PulmonaryVein pulmonary venous tree organ part uberon UBERON:0002016 pulmonary vein UBERON:0002016 Pulmonary veins are blood vessels that transport blood from the lungs to the heart[GO]. GO:0060577 A cranial nerve that originates from neurons in the medulla and in the cervical spinal cord. AAO:0010476 BAMS:11n BAMS:XIn BIRNLEX:812 EHDAA2:0000106 EHDAA:2855 EMAPA:17265 FMA:6720 FMA:80284 GAID:825 MA:0001088 MBA:717 MESH:D000055 NCIT:C32041 SCTID:362469008 VHOG:0000699 Wikipedia:Spinal_accessory_nerve XAO:0004214 neuronames:2085 Willis' nerve accessory XI accessory XI nerve accessory nerve accessory nerve [XI] cervical accessory nerve cranial nerve XI eleventh cranial nerve spinal accessory nerve spinal accessory nerve tree spinal part of accessory nerve uberon CN-XI accessory spinal nerve UBERON:0002019 accessory XI nerve UBERON:0002019 A cranial nerve that originates from neurons in the medulla and in the cervical spinal cord. BIRNLEX:812 http://orcid.org/0000-0002-6601-2165 accessory XI EHDAA2:0000106 cranial nerve XI BIRNLEX:812 eleventh cranial nerve BIRNLEX:812 spinal accessory nerve FMA:6720 CN-XI VHOG:0000699 accessory spinal nerve BAMS:XIn A nervous system structure composed primarily of nerve cell bodies (somas). May also include dendrites and the initial unmyelinated portion of axons. AEO:0001012 EHDAA2:0003136 EHDAA2_RETIRED:0004658 FMA:67242 HBA:4006 MA:0001112 NCIT:C32695 TAO:0002197 VHOG:0001768 Wikipedia:Gray_matter ZFA:0001681 neuronames:2869 gray matter gray matter of neuraxis grey matter grey matter of neuraxis grey substance neuronal grey matter uberon gray mater UBERON:0002020 gray matter UBERON:0002020 A nervous system structure composed primarily of nerve cell bodies (somas). May also include dendrites and the initial unmyelinated portion of axons. Wikipedia:Gray_matter http://orcid.org/0000-0002-6601-2165 gray matter of neuraxis FMA:67242 neuronal grey matter AEO:0001012 gray mater ZFA:0001681 The most posterior of the three principal regions of the brain. In mammals and birds the hindbrain is divided into a rostral metencephalon and a caudal myelencephalon. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata (From: Neuroanatomy of the Zebrafish Brain)[ZFA]. Organ component of neuraxis that has as its parts the pons, cerebellum and medulla oblongata[FMA]. AAO:0010150 BAMS:HB BIRNLEX:942 BTO:0000672 CALOHA:TS-0457 DHBA:10653 DMBA:16808 EFO:0000923 EHDAA2:0000746 EHDAA:3514 EHDAA:6487 EMAPA:16916 FMA:67687 MA:0000195 MAT:0000107 MBA:1065 MESH:D012249 MIAA:0000107 NCIT:C40336 SCTID:303456008 TAO:0000029 VHOG:0000070 Wikipedia:Rhombencephalon XAO:0000015 ZFA:0000029 uberon rhombencephalon UBERON:0002028 hindbrain UBERON:0002028 The most posterior of the three principal regions of the brain. In mammals and birds the hindbrain is divided into a rostral metencephalon and a caudal myelencephalon. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata (From: Neuroanatomy of the Zebrafish Brain)[ZFA]. Organ component of neuraxis that has as its parts the pons, cerebellum and medulla oblongata[FMA]. Wikipedia:Rhombencephalon ZFA:0000029 ZFIN:curator An epithelium that is part of a bronchus [Automatically generated definition]. BTO:0001845 CALOHA:TS-1240 EFO:0000307 EMAPA:32691 FMA:67782 MA:0001839 NCIT:C32231 bronchi epithelial tissue bronchi epithelium bronchial epithelium bronchial trunk epithelial tissue bronchial trunk epithelium bronchus epithelial tissue bronchus epithelium epithelial tissue of bronchi epithelial tissue of bronchial trunk epithelial tissue of bronchus epithelium of bronchi epithelium of bronchial trunk uberon UBERON:0002031 epithelium of bronchus UBERON:0002031 An epithelium that is part of a bronchus [Automatically generated definition]. OBOL:automatic bronchi epithelial tissue OBOL:automatic bronchi epithelium OBOL:automatic bronchial trunk epithelial tissue OBOL:automatic bronchial trunk epithelium OBOL:automatic bronchus epithelial tissue OBOL:automatic epithelial tissue of bronchi OBOL:automatic epithelial tissue of bronchial trunk OBOL:automatic epithelial tissue of bronchus OBOL:automatic epithelium of bronchi OBOL:automatic epithelium of bronchial trunk OBOL:automatic Muscle tissue that contains fibers that are divided by transverse bands into striations. AAO:0010762 AEO:0000140 CALOHA:TS-2047 EHDAA2:0003140 EMAPA:36390 FMA:67905 MA:0002438 NCIT:C12436 WBbt:0005779 Wikipedia:Striated_muscle galen:StriatedMuscle striated muscle uberon UBERON:0002036 striated muscle tissue UBERON:0002036 Muscle tissue that contains fibers that are divided by transverse bands into striations. CL:0000737 GOC:dph GOC:mtg_muscle A systemic artery that supplies the lung with with oxygenated blood. EMAPA:18608 FMA:68109 GAID:477 MA:0001923 MESH:D001981 NCIT:C32230 SCTID:244247009 Wikipedia:Bronchial_artery bronchial arterial tree uberon UBERON:0002040 Although there is much variation, there are usually two bronchial arteries that run to the left lung, and one to the right lung. bronchial artery UBERON:0002040 A systemic artery that supplies the lung with with oxygenated blood. UBERON:cjm Wikipedia:Bronchial_artery The pontine raphe nucleus is one of the raphe nuclei. It is located in the pontine tegmentum. [WP,unvetted]. BAMS:PnR BAMS:RA-PONS BAMS:RPn BIRNLEX:1110 DHBA:12471 DHBA:12475 FMA:68875 HBA:9159 MA:0001022 MBA:238 Wikipedia:Pontine_raphe_nucleus raphe of pons uberon raphe pontis nucleus UBERON:0002047 pontine raphe nucleus UBERON:0002047 The pontine raphe nucleus is one of the raphe nuclei. It is located in the pontine tegmentum. [WP,unvetted]. Wikipedia:Pontine_raphe_nucleus Respiration organ that develops as an outpocketing of the esophagus. AAO:0000275 AAO:0010567 BTO:0000763 CALOHA:TS-0568 EFO:0000934 EHDAA2:0001042 EHDAA:1554 EHDAA:2205 EMAPA:16728 EV:0100042 FMA:7195 GAID:345 MA:0000415 MAT:0000135 MESH:D008168 MIAA:0000135 NCIT:C12468 SCTID:181216001 Wikipedia:Lung XAO:0000119 galen:Lung uberon UBERON:0002048 Snakes and limbless lizards typically possess only the right lung as a major respiratory organ; the left lung is greatly reduced, or even absent. Amphisbaenians, however, have the opposite arrangement, with a major left lung, and a reduced or absent right lung [WP] lung UBERON:0002048 Respiration organ that develops as an outpocketing of the esophagus. http://orcid.org/0000-0002-6601-2165 An interconnected tubular multi-tissue structure contains fluid that is actively transported around the organism[ZFA]. Examples: vasculature of lung, vasculature of face. BTO:0003718 FMA:69050 TAO:0005249 ZFA:0005249 vascular network uberon UBERON:0002049 vasculature UBERON:0002049 An interconnected tubular multi-tissue structure contains fluid that is actively transported around the organism[ZFA]. Examples: vasculature of lung, vasculature of face. ZFA:0005249 vascular network FMA:69050 Anatomical structure that is part of an embryo. AAO:0000138 BILA:0000034 BTO:0000174 CALOHA:TS-2110 EFO:0000461 FMA:69067 GAID:407 MESH:D004628 NCIT:C13229 RETIRED_EHDAA2:0003169 SCTID:667009 TAO:0001105 VSAO:0000178 XAO:0003042 ZFA:0001105 developing embryonic structure embryonic anatomical structure uberon developing structure embryonale Struktur UBERON:0002050 embryonic structure UBERON:0002050 Anatomical structure that is part of an embryo. BTO:0000174 ZFIN:curator developing embryonic structure FBbt:00004208 embryonic anatomical structure RETIRED_EHDAA2:0003169 embryonale Struktur BTO:0000174 An artery that supplies the diaphragm. FMA:69330 MA:0002019 NCIT:C33320 uberon UBERON:0002057 phrenic artery UBERON:0002057 An artery that supplies the diaphragm. https://orcid.org/0000-0002-6601-2165 The truncus arteriosus and bulbus cordis are divided by the aorticopulmonary septum. The truncus arteriosus gives rise to the ascending aorta and the pulmonary trunk. The bulbus cordis gives rise to the smooth parts (outflow tract) of the left and right ventricles. EHDAA2:0004143 EMAPA:35887 FMA:70301 GAID:554 MA:0000103 MESH:D014338 NCIT:C34317 SCTID:308828009 Wikipedia:Truncus_arteriosus_(embryology) uberon UBERON:0002061 truncus arteriosus UBERON:0002061 The truncus arteriosus and bulbus cordis are divided by the aorticopulmonary septum. The truncus arteriosus gives rise to the ascending aorta and the pulmonary trunk. The bulbus cordis gives rise to the smooth parts (outflow tract) of the left and right ventricles. Wikipedia:Truncus_arteriosus_(embryology) The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves[GO]. Swellings of tissue present between the endocardial and myocardial cell layers that will give rise to the interstitial cells of the cardiac valves[ZFA]. EHDAA2:0000434 EHDAA2:0004028 EHDAA:2586 EMAPA:16696 FMA:70302 MA:0000078 TAO:0001317 VHOG:0000932 Wikipedia:Atrioventricular_cushions XAO:0004189 ZFA:0001317 AV cushion atrioventricular cushion cardiac cushion endocardial cushion tissue uberon atrioventricular canal cushion UBERON:0002062 GO graph seems to suggest this is an endothelium. WP: The endocardial cushions are thought to arise from a subset of endothelial cells that undergo epithelial to mesenchymal transformation, a process whereby these cells break cell-to-cell contacts and migrate into the cardiac jelly (towards to interior of the heart tube). Latest (2010-06-01) new def suggested for GO, added above. Note that EHDAA2 has a more detailed model which we may later adopt. JB: Patterning makes the cushions lay down connective tissue in three domains that force out the local endothelial lining and so the leaflets form endocardial cushion UBERON:0002062 The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves[GO]. Swellings of tissue present between the endocardial and myocardial cell layers that will give rise to the interstitial cells of the cardiac valves[ZFA]. GO:0003197 Wikipedia:Atrioventricular_cushions ZFIN:curator atrioventricular cushion Wikipedia:Endocardial_cushion cardiac cushion PMID:15797462 endocardial cushion tissue EHDAA2:0000434 atrioventricular canal cushion FMA:70302 The sinus venosus is a large cardiac chamber at the inflow tract that receives venous blood from systemic circulation. precedes the atrium on the venous side of the chordate heart. inflow tract AAO:0010505 EHDAA2:0001839 EHDAA:480 EMAPA:16237 FMA:70303 NCIT:C34299 NCIT:C34300 TAO:0000154 VHOG:0000177 Wikipedia:Sinus_venosus ZFA:0000154 uberon sinus venarum venarum venarum sinus venosus UBERON:0002063 sinus venosus UBERON:0002063 The sinus venosus is a large cardiac chamber at the inflow tract that receives venous blood from systemic circulation. precedes the atrium on the venous side of the chordate heart. PMID:20735616 Wikipedia:Sinus_venosus inflow tract ZFA:0000154 sinus venarum Wikipedia:Sinus_venosus venarum Wikipedia:Sinus_venosus venarum sinus Wikipedia:Sinus_venosus venosus Wikipedia:Sinus_venosus The dermis is a layer of skin between the epidermis (with which it makes up the skin) and subcutaneous tissues, and is composed of two layers, the papillary and reticular dermis[WP]. AAO:0000128 BTO:0000294 CALOHA:TS-2076 EFO:0000953 EMAPA:17527 EV:0100154 FMA:70323 GAID:1321 MA:0000152 MAT:0000153 MESH:D020405 MIAA:0000153 NCIT:C12701 SCTID:361696001 TAO:0001119 VHOG:0000108 Wikipedia:Dermis XAO:0000217 ZFA:0001119 vertebrate dermis uberon cutis UBERON:0002067 dermis UBERON:0002067 The dermis is a layer of skin between the epidermis (with which it makes up the skin) and subcutaneous tissues, and is composed of two layers, the papillary and reticular dermis[WP]. Wikipedia:Dermis ZFIN:curator cutis BTO:0000294 Lowermost layer of the integumentary system in vertebrates. Types of cells that are found in the hypodermis are fibroblasts, adipose cells, and macrophages. It is derived from the mesoderm, but unlike the dermis, it is not derived from the dermatome region of the mesoderm. The hypodermis is used mainly for fat storage[WP]. BTO:0001314 CALOHA:TS-2366 FMA:70544 NCIT:C33645 TAO:0001136 Wikipedia:Hypodermis ZFA:0001136 hypoderm vertebrate hypodermis uberon sub-tegumental tissue subcutaneous tissue subcutis subtegumental tissue UBERON:0002072 hypodermis UBERON:0002072 Lowermost layer of the integumentary system in vertebrates. Types of cells that are found in the hypodermis are fibroblasts, adipose cells, and macrophages. It is derived from the mesoderm, but unlike the dermis, it is not derived from the dermatome region of the mesoderm. The hypodermis is used mainly for fat storage[WP]. Wikipedia:Hypodermis sub-tegumental tissue BTO:0004525 subcutaneous tissue Wikipedia:Hypodermis subtegumental tissue BTO:0004525 An organ that is located within the body cavity (or in its extension, in the scrotum); it consists of organ parts that are embryologically derived from endoderm, splanchnic mesoderm or intermediate mesoderm; together with other organs, the viscus constitutes the respiratory, gastrointestinal, urinary, reproductive and immune systems, or is the central organ of the cardiovascular system. Examples: heart, lung, esophagus, kidney, ovary, spleen. AAO:0010386 BTO:0001491 EHDAA:512 EMAPA:16245 FMA:7085 MA:0000019 MESH:D014781 NCIT:C28287 RETIRED_EHDAA2:0002201 SCTID:118760003 Wikipedia:Viscus XAO:0003034 visceral organ visceral organ system uberon splanchnic tissue viscera visceral tissue UBERON:0002075 viscus UBERON:0002075 An organ that is located within the body cavity (or in its extension, in the scrotum); it consists of organ parts that are embryologically derived from endoderm, splanchnic mesoderm or intermediate mesoderm; together with other organs, the viscus constitutes the respiratory, gastrointestinal, urinary, reproductive and immune systems, or is the central organ of the cardiovascular system. Examples: heart, lung, esophagus, kidney, ovary, spleen. BTO:0001491 Wikipedia:Viscus https://github.com/obophenotype/mouse-anatomy-ontology/issues/14 visceral organ RETIRED_EHDAA2:0002201 visceral organ system MA:0000019 splanchnic tissue BTO:0001491 visceral tissue BTO:0001491 A cardiac atrium that is in the right side of the heart. It receives deoxygenated blood. In mammals, this comes from the superior and inferior vena cava and the coronary sinus, and pumps it into the right ventricle through the tricuspid valve. AAO:0010248 BTO:0001703 EHDAA2:0000290 EMAPA:17321 FMA:7096 MA:0000075 NCIT:C12868 SCTID:244383003 VHOG:0000328 Wikipedia:Right_atrium XAO:0003192 galen:RightAtrium cardiac right atrium heart right atrium right atrium right atrium of heart right cardiac atrium uberon UBERON:0002078 right cardiac atrium UBERON:0002078 A cardiac atrium that is in the right side of the heart. It receives deoxygenated blood. In mammals, this comes from the superior and inferior vena cava and the coronary sinus, and pumps it into the right ventricle through the tricuspid valve. Wikipedia:Right_atrium http://orcid.org/0000-0002-6601-2165 heart right atrium MA:0000075 right atrium VHOG:0000328 A cardiac atrium that is in the left side of the heart. It receives oxygenated blood from the pulmonary veins, In mammals this is pumped into the left ventricle, via the Mitral valve. AAO:0010247 BTO:0001702 EHDAA2:0000275 EMAPA:17315 FMA:7097 MA:0000074 NCIT:C12869 SCTID:244387002 VHOG:0000369 Wikipedia:Left_atrium XAO:0003191 galen:LeftAtrium cardiac left atrium heart left atrium left atrium left atrium of heart left cardiac atrium uberon UBERON:0002079 left cardiac atrium UBERON:0002079 A cardiac atrium that is in the left side of the heart. It receives oxygenated blood from the pulmonary veins, In mammals this is pumped into the left ventricle, via the Mitral valve. Wikipedia:Left_atrium http://orcid.org/0000-0002-6601-2165 heart left atrium MA:0000074 left atrium VHOG:0000369 A cardiac ventricle that is in the right side of the heart. BTO:0001630 CALOHA:TS-0443 EHDAA2:0000196 EMAPA:17340 FMA:7098 MA:0000093 NCIT:C12870 SCTID:244384009 VHOG:0000717 Wikipedia:Right_ventricle galen:RightVentricle cardiac right ventricle right ventricle right ventricle of heart uberon right cardiac ventricle UBERON:0002080 heart right ventricle UBERON:0002080 A cardiac ventricle that is in the right side of the heart. http://orcid.org/0000-0002-6601-2165 right ventricle FMA:7098 right cardiac ventricle EMAPA:17340 Cardiac chamber in which blood enters the heart. AAO:0010246 BTO:0000903 CALOHA:TS-0437 EFO:0000277 EHDAA2:0000154 EHDAA:1265 EMAPA:16688 EV:0100019 FMA:7099 GAID:555 MA:0000073 MAT:0000496 MESH:D006325 NCIT:C12728 SCTID:261405004 TAO:0000471 VHOG:0000175 Wikipedia:Heart_atrium ZFA:0000471 galen:Atrium atrium atrium of heart heart atrium uberon atrial tissue UBERON:0002081 cardiac atrium UBERON:0002081 Cardiac chamber in which blood enters the heart. Wikipedia:Heart_atrium http://orcid.org/0000-0002-6601-2165 atrium ZFA:0000471 atrial tissue BTO:0000903 Cardiac chamber through which blood leaves the heart. ventricle AAO:0010249 BTO:0000862 CALOHA:TS-0444 EFO:0000317 EHDAA2:0004164 EHDAA:1912 EMAPA:17331 EV:0100020 FMA:7100 GAID:568 MA:0000091 MAT:0000497 MESH:D006352 NCIT:C12730 SCTID:277699000 TAO:0000009 VHOG:0000435 Wikipedia:Ventricle_(heart) XAO:0003193 ZFA:0000009 galen:Ventricle heart ventricle lower chamber of heart ventricle of heart uberon UBERON:0002082 cardiac ventricle UBERON:0002082 Cardiac chamber through which blood leaves the heart. Wikipedia:Ventricle_(heart) http://orcid.org/0000-0002-6601-2165 A cardiac ventricle that is in the left side of the heart. BTO:0001629 CALOHA:TS-0439 EHDAA2:0002178 EMAPA:17337 FMA:7101 MA:0000092 NCIT:C12871 SCTID:244385005 VHOG:0000718 Wikipedia:Left_ventricle galen:LeftVentricle cardiac left ventricle left cardiac ventricle left ventricle left ventricle of heart uberon UBERON:0002084 heart left ventricle UBERON:0002084 A cardiac ventricle that is in the left side of the heart. http://orcid.org/0000-0002-6601-2165 left ventricle FMA:7101 A cardiac septum that divides the left and right atria of the heart. EHDAA2:0000838 EHDAA:1896 EMAPA:17011 FMA:7108 MA:0000084 NCIT:C32818 SCTID:362016003 VHOG:0000385 Wikipedia:Interatrial_septum galen:InteratrialSeptum atrial septum atrium septum interatrial septal wall uberon UBERON:0002085 interatrial septum UBERON:0002085 A cardiac septum that divides the left and right atria of the heart. http://orcid.org/0000-0002-6601-2165 The postcranial subdivision of skeleton structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins; in human consists of the bones of the vertebral column, the thoracic cage and the pelvis[ZFA+FMA]. axial skeleton AAO:0000034 EFO:0000942 EHDAA2:0000161 EHDAA:5049 FMA:71221 MA:0002986 MAT:0000148 MIAA:0000148 TAO:0000317 VHOG:0000317 VSAO:0000093 XAO:0003073 ZFA:0000317 post-cranial axial skeleton uberon UBERON:0002090 previous some AOs had used the term 'axial skeleton' to include the skull. This is being resolved (see tracker items above). Status: MA - fixed. postcranial axial skeleton UBERON:0002090 The postcranial subdivision of skeleton structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins; in human consists of the bones of the vertebral column, the thoracic cage and the pelvis[ZFA+FMA]. ZFA:0000317 https://sourceforge.net/tracker/?func=detail&aid=2983975&group_id=76834&atid=974957 https://sourceforge.net/tracker/?func=detail&atid=1205376&aid=2983977&group_id=76834 axial skeleton FMA:71221 https://github.com/obophenotype/uberon/wiki/The-axial-skeleton Subdivision of skeleton which which consists of all the skeletal elements in in the pectoral and pelvic appendage complexes[cjm]. AAO:0000747 EFO:0000951 EMAPA:32729 FMA:71222 MA:0000290 MAT:0000278 MIAA:0000278 NCIT:C49477 SCTID:322050006 VSAO:0000076 Wikipedia:Appendicular_skeleton XAO:0003166 appendicular skeleton entire appendicular skeleton uberon UBERON:0002091 appendicular skeleton UBERON:0002091 Subdivision of skeleton which which consists of all the skeletal elements in in the pectoral and pelvic appendage complexes[cjm]. UBERONREF:0000003 Wikipedia:Appendicular_skeleton https://orcid.org/0000-0002-6601-2165 entire appendicular skeleton https://github.com/obophenotype/uberon/issues/59 The fibrous membrane forming the outer of the three coverings that surrounds the brain within the cranial cavity; consists of two layers including the periosteal layer and the meningeal layer. EMAPA:32668 FMA:71236 MA:0000815 NCIT:C49332 SCTID:309321003 VHOG:0000270 cranial dura mater dura mater encephali dura mater of brain uberon UBERON:0002092 brain dura mater UBERON:0002092 The fibrous membrane forming the outer of the three coverings that surrounds the brain within the cranial cavity; consists of two layers including the periosteal layer and the meningeal layer. MP:0009025 cranial dura mater FMA:71236 A dura mater that is part of a spinal cord [Automatically generated definition]. EMAPA:17806 FMA:71237 MA:0001132 NCIT:C49799 SCTID:362302001 VHOG:0000411 dura mater of neuraxis of spinal cord dura mater of spinal cord spinal cord dura mater spinal cord dura mater of neuraxis uberon UBERON:0002093 spinal dura mater UBERON:0002093 A dura mater that is part of a spinal cord [Automatically generated definition]. OBOL:automatic dura mater of neuraxis of spinal cord OBOL:automatic spinal cord dura mater of neuraxis OBOL:automatic Cardiac septum which separates the right ventricle from the left ventricle.[FMA]. BTO:0002483 EFO:0001956 EHDAA:2603 EMAPA:17333 FMA:7133 MA:0000085 NCIT:C32874 SCTID:362019005 VHOG:0000386 Wikipedia:Interventricular_septum galen:InterventricularSeptum heart interventricular septum heart ventricular septum uberon interventricular septum of heart interventriculare cordis intraventricular septum septum inferius septum membranaceum ventricle septum ventricular septum UBERON:0002094 interventricular septum UBERON:0002094 Cardiac septum which separates the right ventricle from the left ventricle.[FMA]. FMA:7133 heart interventricular septum MA:0000085 heart ventricular septum MA:0000085 interventricular septum of heart BTO:0002483 interventriculare cordis BTO:0002483 intraventricular septum Wikipedia:Interventricular_septum septum inferius Wikipedia:Interventricular_septum septum membranaceum Wikipedia:Interventricular_septum ventricular septum MA:0000085 Wikipedia:Interventricular_septum The organ covering the body that consists of the dermis and epidermis. BTO:0001253 CALOHA:TS-0934 EFO:0000962 EHDAA2:0001844 EMAPA:17525 FMA:7163 MESH:D012867 MFMO:0000099 NCIT:C12470 SCTID:181469002 Wikipedia:Skin XAO:0000023 galen:Skin entire skin skin organ uberon entire integument integument integumental organ pelt skin UBERON:0002097 skin of body UBERON:0002097 The organ covering the body that consists of the dermis and epidermis. UBERON:cjm The thin membranous structure between the two heart atria or the thick muscular structure between the two heart ventricles. EMAPA:35400 FMA:7180 GAID:562 MA:0000083 MESH:D006346 NCIT:C49485 SCTID:362014000 heart septum septum of heart uberon UBERON:0002099 cardiac septum UBERON:0002099 The thin membranous structure between the two heart atria or the thick muscular structure between the two heart ventricles. MESH:A07.541.459 Organism subdivision which is the part of the body posterior to the cervical region (or head, when cervical region not present) and anterior to the caudal region. Includes the sacrum when present. AAO:0010339 BILA:0000116 BTO:0001493 CALOHA:TS-1071 EFO:0000966 EMAPA:31857 FMA:7181 MA:0000004 MAT:0000296 MIAA:0000296 NCIT:C33816 SCTID:262225004 TAO:0001115 Wikipedia:Torso XAO:0000054 XAO:0003025 ZFA:0001115 galen:Trunk thoracolumbar region torso trunk region uberon Rumpf UBERON:0002100 trunk UBERON:0002100 Organism subdivision which is the part of the body posterior to the cervical region (or head, when cervical region not present) and anterior to the caudal region. Includes the sacrum when present. TAO:0001115 UBERONREF:0000006 Wikipedia:Torso trunk region XAO:0000054 Rumpf BTO:0001493 The sensory system subserving the sense of vision. UBERON:0007036 AAO:0000632 BILA:0000140 EMAPA:36003 FMA:7191 MA:0002444 NCIT:C12888 SCTID:281831001 TAO:0001127 Wikipedia:Visual_system XAO:0003198 ZFA:0001127 http://uri.neuinfo.org/nif/nifstd/FMAID_7191 photosensory system visual organ system uberon UBERON:0002104 visual system UBERON:0002104 The sensory system subserving the sense of vision. NIFSTD:FMAID_7191 photosensory system BILA:0000140 Sensory system responsible for the perception of spatial orientation and auditory stimuli. AAO:0000631 FMA:78500 TAO:0001138 XAO:0003195 ZFA:0001138 auditory organ system vestibuloauditory system uberon auditory system auditory/vestibular system vestibuloauditory system UBERON:0002105 vestibulo-auditory system UBERON:0002105 Sensory system responsible for the perception of spatial orientation and auditory stimuli. ZFA:0001138 A portion of smooth muscle tissue that is part of an artery [Automatically generated definition]. BTO:0000087 CALOHA:TS-1198 EMAPA:36285 FMA:72024 MA:0000708 NCIT:C49195 arterial smooth muscle artery smooth muscle artery smooth muscle tissue smooth muscle of artery uberon arterial smooth muscle cell UBERON:0002111 artery smooth muscle tissue UBERON:0002111 A portion of smooth muscle tissue that is part of an artery [Automatically generated definition]. OBOL:automatic arterial smooth muscle BTO:0000087 smooth muscle of artery FMA:72024 arterial smooth muscle cell BTO:0000087 A portion of smooth muscle tissue that is part of a esophagus [Automatically generated definition]. EMAPA:35323 FMA:72025 MA:0001573 esophageal smooth muscle esophagus involuntary muscle esophagus non-striated muscle esophagus smooth muscle esophagus smooth muscle tissue gullet involuntary muscle gullet non-striated muscle gullet smooth muscle gullet smooth muscle tissue involuntary muscle of esophagus involuntary muscle of gullet involuntary muscle of oesophagus non-striated muscle of esophagus non-striated muscle of gullet non-striated muscle of oesophagus oesophagus involuntary muscle oesophagus non-striated muscle oesophagus smooth muscle tissue smooth muscle of gullet smooth muscle of oesophagus smooth muscle tissue of esophagus smooth muscle tissue of gullet smooth muscle tissue of oesophagus uberon oesophagus smooth muscle UBERON:0002112 smooth muscle of esophagus UBERON:0002112 A portion of smooth muscle tissue that is part of a esophagus [Automatically generated definition]. OBOL:automatic esophagus involuntary muscle OBOL:automatic esophagus non-striated muscle OBOL:automatic esophagus smooth muscle tissue OBOL:automatic gullet involuntary muscle OBOL:automatic gullet non-striated muscle OBOL:automatic gullet smooth muscle OBOL:automatic gullet smooth muscle tissue OBOL:automatic involuntary muscle of esophagus OBOL:automatic involuntary muscle of gullet OBOL:automatic involuntary muscle of oesophagus OBOL:automatic non-striated muscle of esophagus OBOL:automatic non-striated muscle of gullet OBOL:automatic non-striated muscle of oesophagus OBOL:automatic oesophagus involuntary muscle OBOL:automatic oesophagus non-striated muscle OBOL:automatic oesophagus smooth muscle tissue OBOL:automatic smooth muscle of gullet OBOL:automatic smooth muscle of oesophagus OBOL:automatic smooth muscle tissue of esophagus OBOL:automatic smooth muscle tissue of gullet OBOL:automatic smooth muscle tissue of oesophagus OBOL:automatic An ovary that is part of a right side of organism [Automatically generated definition]. FMA:7213 MA:0001705 NCIT:C33487 SCTID:280123002 uberon UBERON:0002118 right ovary UBERON:0002118 An ovary that is part of a right side of organism [Automatically generated definition]. OBOL:automatic An ovary that is part of a left side of organism [Automatically generated definition]. FMA:7214 MA:0001704 NCIT:C32969 SCTID:280124008 uberon UBERON:0002119 left ovary UBERON:0002119 An ovary that is part of a left side of organism [Automatically generated definition]. OBOL:automatic A collection of brainstem nuclei that functions in multiple aspects of hearing and is an important component of the ascending and descending auditory pathways of the auditory system. BAMS:SOC BIRNLEX:1307 DHBA:12462 EMAPA:35840 EV:0100263 FMA:72247 HBA:9177 MA:0001026 MBA:398 VHOG:0001381 Wikipedia:Superior_olivary_complex superior olivary nuclei uberon superior olivary nucleus (Barr & Kiernan) UBERON:0002128 superior olivary complex UBERON:0002128 A collection of brainstem nuclei that functions in multiple aspects of hearing and is an important component of the ascending and descending auditory pathways of the auditory system. ISBN:0-19-502694-2 Wikipedia:Superior_olivary_complex superior olivary nuclei FMA:72247 superior olivary nucleus (Barr & Kiernan) NeuroNames:569 The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic[GO]. Bluish region in the superior angle of the fourth ventricle floor, corresponding to melanin-like pigmented nerve cells which lie lateral to the ponto-mesencephalic central gray (griseum centrale). It is also known as nucleus pigmentosus pontis[GAID]. BAMS:CAE BAMS:LC BIRNLEX:905 BM:Pons-LC BTO:0001408 DHBA:12819 DMBA:16972 EFO:0001963 EMAPA:35502 FMA:72478 GAID:577 HBA:9148 MA:0001017 MBA:147 MESH:D008125 NCIT:C97333 SCTID:369016004 TAO:0000539 Wikipedia:Locus_ceruleus ZFA:0000539 Noradrenergic cell group A6 blue nucleus caerulean nucleus locus caeruleus locus coeruleu locus coeruleus nucleus of locus caeruleus nucleus pigmentosus pontis substantia ferruginea uberon locus cinereus locus coeruleus (Vicq d'Azyr) UBERON:0002148 locus ceruleus UBERON:0002148 The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic[GO]. Bluish region in the superior angle of the fourth ventricle floor, corresponding to melanin-like pigmented nerve cells which lie lateral to the ponto-mesencephalic central gray (griseum centrale). It is also known as nucleus pigmentosus pontis[GAID]. GAID:577 GO:0021703 Wikipedia:Locus_ceruleus Noradrenergic cell group A6 Noradrenergic_cell_group_A6&oldid=981960774 blue nucleus BIRNLEX:905 locus caeruleus BIRNLEX:905 nucleus pigmentosus pontis BIRNLEX:905 substantia ferruginea BIRNLEX:905 locus cinereus BTO:0001408 locus coeruleus (Vicq d'Azyr) NeuroNames:583 Nucleus containing parasympathetic neurons giving rise to the parasympathetic division of the facial nerve, innervating the salivary glands (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 703). BAMS:SSN BAMS:SuS BIRNLEX:1131 DHBA:12435 EHDAA2:0004646 FMA:72482 HBA:9194 MA:0001027 MBA:462 SCTID:369028007 Wikipedia:Superior_salivatory_nucleus superior salivary nucleus uberon UBERON:0002149 superior salivatory nucleus UBERON:0002149 Nucleus containing parasympathetic neurons giving rise to the parasympathetic division of the facial nerve, innervating the salivary glands (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 703). BIRNLEX:1131 superior salivary nucleus GO:0021753 The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers[GO]. UBERON:0006225 AAO:0010408 BTO:0000387 CALOHA:TS-2075 EFO:0000821 EHDAA2:0004153 EMAPA:17868 EMAPA:32686 EV:0100021 FMA:7280 GAID:550 MA:0000076 MAT:0000455 MESH:D004699 NCIT:C13004 SCTID:362013006 TAO:0001320 VHOG:0000084 Wikipedia:Endocardium XAO:0000066 ZFA:0001320 galen:Endocardium endocardial lining endocardial tissue heart endocardium uberon heart endocardial tissue UBERON:0002165 fixed in GO to reflect FMA. See email to David/Varsha June 18 2010 endocardium UBERON:0002165 The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers[GO]. GO:0003157 endocardial lining EMAPA:32686 endocardial tissue EMAPA:17868 heart endocardial tissue VHOG:0000084 Endocardium that is part of the atrium. EMAPA:32745 FMA:7284 MA:0000077 SCTID:192001005 TAO:0002169 VHOG:0000606 ZFA:0001614 Cardiac atria endocardium atrial endocardium atrium endocardium atrium of heart endocardium cardiac atrium endocardium endocardium of Cardiac atria endocardium of atrium of heart endocardium of cardiac atrium endocardium of heart atrium heart atrium endocardium uberon atrium endocardial tissue UBERON:0002166 endocardium of atrium UBERON:0002166 Endocardium that is part of the atrium. ZFIN:curator Cardiac atria endocardium OBOL:automatic atrium of heart endocardium OBOL:automatic cardiac atrium endocardium OBOL:automatic endocardium of Cardiac atria OBOL:automatic endocardium of atrium of heart OBOL:automatic endocardium of cardiac atrium OBOL:automatic endocardium of heart atrium OBOL:automatic heart atrium endocardium OBOL:automatic atrium endocardial tissue VHOG:0000606 Lung which consists of the right upper lobe, middle lobe and right lower lobe.[FMA]. EHDAA2:0001730 EHDAA:4969 EMAPA:17661 FMA:7309 MA:0000426 NCIT:C33483 SCTID:361967000 VHOG:0000301 Wikipedia:Right_lung uberon UBERON:0002167 right lung UBERON:0002167 Lung which consists of the right upper lobe, middle lobe and right lower lobe.[FMA]. FMA:FMA Wikipedia:Right_lung Lung which consists of the left upper lobe and left lower lobe.[FMA]. EHDAA2:0000943 EHDAA:4947 EMAPA:17653 FMA:7310 MA:0000425 NCIT:C32967 SCTID:361982005 VHOG:0000618 Wikipedia:Left_lung uberon UBERON:0002168 left lung UBERON:0002168 Lung which consists of the left upper lobe and left lower lobe.[FMA]. FMA:FMA Wikipedia:Left_lung The upper conducting airways of the lung; these airways arise from the terminus of the trachea. BTO:0001340 CALOHA:TS-1229 EFO:0000932 EMAPA:32689 EV:0100041 FMA:7409 GAID:346 MA:0000436 MAT:0000133 MESH:D001980 MIAA:0000133 NCIT:C12683 SCTID:181215002 VHOG:0000262 Wikipedia:Bronchus XAO:0000121 bronchial trunk uberon bronchial tissue UBERON:0002185 bronchus UBERON:0002185 The upper conducting airways of the lung; these airways arise from the terminus of the trachea. ISBN:0-397-51047-0 MESH:A04.411.125 MGI:cwg MP:0002264 bronchial trunk FMA:7409 bronchial tissue BTO:0001340 A portion of adipose tissue that is part of the hypodermis, beneath the dermis. UBERON:0008875 panniculus adiposus BTO:0004042 EMAPA:35829 FMA:74315 MA:0000473 fatty layer of subcutaneous tissue hypodermis fat layer subcutaneous fat layer uberon fatty layer of superficial fascia subcutaneous fat UBERON:0002190 subcutaneous adipose tissue UBERON:0002190 A portion of adipose tissue that is part of the hypodermis, beneath the dermis. http://orcid.org/0000-0002-6601-2165 panniculus adiposus MP:0011156 fatty layer of subcutaneous tissue FMA:74315 hypodermis fat layer MP:0011156 subcutaneous fat layer MP:0011156 fatty layer of superficial fascia FMA:74315 subcutaneous fat BTO:0004042 Anatomical cluster consisting of the hematopoietic system and the lymphoid system, or its analogs. CALOHA:TS-2018 EHDAA2:0004615 EMAPA:18765 FMA:74562 MA:0000013 hematolymphoid system lymphomyeloid complex uberon haemolymphoid system UBERON:0002193 hemolymphoid system UBERON:0002193 Anatomical cluster consisting of the hematopoietic system and the lymphoid system, or its analogs. http://orcid.org/0000-0002-6601-2165 The dermis, epidermis and hypodermis. AAO:0000239 BTO:0000634 FMA:74657 TAO:0000368 VSAO:0000029 Wikipedia:Integument ZFA:0000368 galen:Integument dermis plus epidermis plus hypodermis skin and subcutaneous tissue skin plus hypodermis the integument uberon dermal system dermoid system skin tegument vertebrate integument UBERON:0002199 integument UBERON:0002199 The dermis, epidermis and hypodermis. Wikipedia:Integument the integument FMA:74657 dermal system BTO:0000634 dermoid system BTO:0000634 tegument BTO:0000634 Vasculature that is part of a head [Automatically generated definition]. EFO:0003656 FMA:74710 TAO:0001267 XAO:0004152 ZFA:0001267 adult head vascular network adult head vasculature cranial vasculature head vascular network vascular network of adult head vascular network of head vasculature of adult head uberon head vasculature UBERON:0002200 vasculature of head UBERON:0002200 Vasculature that is part of a head [Automatically generated definition]. OBOL:automatic adult head vascular network OBOL:automatic adult head vasculature OBOL:automatic head vascular network OBOL:automatic vascular network of adult head OBOL:automatic vascular network of head OBOL:automatic vasculature of adult head OBOL:automatic A vasculature that is part of a trunk [Automatically generated definition]. FMA:74712 TAO:0005024 ZFA:0005024 torso vascular network torso vasculature trunk vascular network trunk vasculature vascular network of torso vascular network of trunk vasculature of torso uberon UBERON:0002201 vasculature of trunk UBERON:0002201 A vasculature that is part of a trunk [Automatically generated definition]. OBOL:automatic torso vascular network OBOL:automatic torso vasculature OBOL:automatic trunk vascular network OBOL:automatic vascular network of torso OBOL:automatic vascular network of trunk OBOL:automatic vasculature of torso OBOL:automatic A submucosa that is part of a trachea. BTO:0002115 EMAPA:35879 FMA:7472 MA:0001860 NCIT:C49307 SCTID:4419000 submucosa of windpipe trachea submucosa tracheal submucosa windpipe submucosa uberon submucous layer of trachea UBERON:0002202 submucosa of trachea UBERON:0002202 A submucosa that is part of a trachea. OBOL:automatic submucosa of windpipe OBOL:automatic windpipe submucosa OBOL:automatic submucous layer of trachea BTO:0002115 Vasculature that is part of the eye region. FMA:74743 SCTID:123846009 TAO:0007057 ZFA:0007057 eye vascular network ocular blood vessel ocular vasculature vascular network of eye uberon eye vasculature optic vasculature UBERON:0002203 vasculature of eye UBERON:0002203 Vasculature that is part of the eye region. OBOL:automatic https://sourceforge.net/tracker/?func=detail&aid=3489658&group_id=76834&atid=994726 eye vascular network OBOL:automatic ocular blood vessel ZFA:0007057 vascular network of eye OBOL:automatic Anatomical system that consists of the muscular and skeletal systems. AAO:0010546 CALOHA:TS-1311 EMAPA:32714 EV:0100139 FMA:7482 GAID:98 MA:0002418 MESH:D009141 NCIT:C12754 SCTID:278858007 VHOG:0001275 VSAO:0000031 Wikipedia:Musculoskeletal_system XAO:0000168 musculo-skeletal system uberon UBERON:0002204 musculoskeletal system UBERON:0002204 Anatomical system that consists of the muscular and skeletal systems. VSAO:0000031 VSAO:curator https://github.com/obophenotype/uberon/issues/77 Nonsynovial joint in which the articulating bones or cartilages are connected by ligaments. Examples: sagittal suture, inferior tibiofibular syndesmosis, gomphosis.[FMA]. AEO:0000178 EHDAA2:0003178 EMAPA:35344 FMA:7492 MA:0000321 SCTID:37772004 TAO:0005156 Wikipedia:Fibrous_joint ZFA:0005156 articulatio fibrosa uberon UBERON:0002209 fibrous joint UBERON:0002209 Nonsynovial joint in which the articulating bones or cartilages are connected by ligaments. Examples: sagittal suture, inferior tibiofibular syndesmosis, gomphosis.[FMA]. FMA:FMA Wikipedia:Fibrous_joint Nonsynovial joint in which the articulating bones or cartilages are connected by cartilage. Examples: Spheno-occipital synchondrosis, first sternocostal joint, pubic symphysis.[FMA]. EMAPA:36581 FMA:7496 MA:0000320 SCTID:58442004 TAO:0005155 Wikipedia:Cartilaginous_joint ZFA:0005155 articulatio cartilaginea uberon UBERON:0002213 cartilaginous joint UBERON:0002213 Nonsynovial joint in which the articulating bones or cartilages are connected by cartilage. Examples: Spheno-occipital synchondrosis, first sternocostal joint, pubic symphysis.[FMA]. FMA:FMA Wikipedia:Cartilaginous_joint Cartilaginous joint in which the articulating bones or cartilages are connected by hyaline cartilage. Examples: spheno-occipital synchondrosis, first sternocostal joint.[FMA]. EMAPA:35846 FMA:7497 MA:0001501 SCTID:42903008 Wikipedia:Synchondrosis primary cartilaginous joint uberon epiphysial cartilage UBERON:0002215 synchondrosis UBERON:0002215 Cartilaginous joint in which the articulating bones or cartilages are connected by hyaline cartilage. Examples: spheno-occipital synchondrosis, first sternocostal joint.[FMA]. FMA:FMA Wikipedia:Synchondrosis primary cartilaginous joint FMA:7497 epiphysial cartilage FMA:7497 Cartilaginous joint in which the articulating bones or cartilages are connected by fibrocartilage. Examples: pubic symphysis, intervertebral symphysis, manubriosternal joint.[FMA]. FMA:7498 MA:0001504 SCTID:1584001 Wikipedia:Symphysis secondary cartilaginous joint uberon UBERON:0002216 symphysis UBERON:0002216 Cartilaginous joint in which the articulating bones or cartilages are connected by fibrocartilage. Examples: pubic symphysis, intervertebral symphysis, manubriosternal joint.[FMA]. FMA:FMA Wikipedia:Symphysis secondary cartilaginous joint FMA:7498 Joint in which the articulating bones or cartilages are connected by an articular capsule which encloses a synovial membrane and a synovial cavity. Examples: Temporomandibular joint, knee joint.[FMA]. AEO:0000183 CALOHA:TS-2138 EHDAA2:0003183 FMA:7501 MA:0000322 NCIT:C32461 SCTID:113234001 TAO:0005153 Wikipedia:Synovial_joint ZFA:0005153 galen:SynovialJoint articulatio synoviale diarthrosis diarthrosis joint uberon UBERON:0002217 synovial joint UBERON:0002217 Joint in which the articulating bones or cartilages are connected by an articular capsule which encloses a synovial membrane and a synovial cavity. Examples: Temporomandibular joint, knee joint.[FMA]. FMA:7501 Wikipedia:Synovial_joint The part of the coelemic cavity lumen that is enclosed by the walls of the thorax. EMAPA:36497 FMA:7565 GAID:93 MA:0000032 MESH:D035423 NCIT:C12905 SCTID:243949006 Wikipedia:Thoracic_cavity cavity of chest cavity of thorax chest cavity pectoral cavity space of thoracic compartment thoracic lumen uberon UBERON:0002224 thoracic cavity UBERON:0002224 The part of the coelemic cavity lumen that is enclosed by the walls of the thorax. UBERON:cjm Wikipedia:Thoracic_cavity space of thoracic compartment FMA:7565 Part of the central nervous system located in the vertebral canal continuous with and caudal to the brain; demarcated from brain by plane of foramen magnum. It is composed of an inner core of gray matter in which nerve cells predominate, and an outer layer of white matter in which myelinated nerve fibers predominate, and surrounds the central canal. (CUMBO). AAO:0010151 BAMS:SP BAMS:Spinal BIRNLEX:1709 BM:SpC BTO:0001279 CALOHA:TS-0953 DHBA:12890 DMBA:17651 EFO:0000110 EHDAA2:0001255 EHDAA:2863 EMAPA:17577 EV:0100316 FMA:7647 GAID:695 MA:0000216 MAT:0000183 MESH:D013116 MIAA:0000183 NCIT:C12464 SCTID:180959008 TAO:0000075 VHOG:0000601 Wikipedia:Spinal_cord XAO:0000020 ZFA:0000075 uberon cerebro-cerebellar fissure cerebrocerebellar fissure spinal cord structure spinal medulla UBERON:0002240 spinal cord UBERON:0002240 Part of the central nervous system located in the vertebral canal continuous with and caudal to the brain; demarcated from brain by plane of foramen magnum. It is composed of an inner core of gray matter in which nerve cells predominate, and an outer layer of white matter in which myelinated nerve fibers predominate, and surrounds the central canal. (CUMBO). BIRNLEX:1709 cerebro-cerebellar fissure NeuroNames:22 cerebrocerebellar fissure NeuroNames:22 spinal cord structure ZFA:0000075 spinal medulla BTO:0001279 Endoskeletal elements that encase the brain, nose, inner ear[cjm]. that part of the neurocranium formed by endochondral ossification and comprising the bones of the base of the skull[TFD]. AAO:0010169 EHDAA2:0000243 EMAPA:17681 TAO:0001424 VHOG:0000288 Wikipedia:Chondrocranium ZFA:0001424 uberon calvarium UBERON:0002241 chondrocranium UBERON:0002241 Endoskeletal elements that encase the brain, nose, inner ear[cjm]. that part of the neurocranium formed by endochondral ossification and comprising the bones of the base of the skull[TFD]. Wikipedia:Chondrocranium http://medical-dictionary.thefreedictionary.com/chondrocranium calvarium MA:0000317 The ventral grey column of the spinal cord[MP]. The neurons of the ventral region of the mature spinal cord participate in motor output[GO]. BAMS:VH BIRNLEX:2668 BTO:0005151 EMAPA:18575 EMAPA:35794 FMA:256541 MA:0001134 NCIT:C33859 SCTID:279443000 TAO:0000702 VHOG:0001288 Wikipedia:Anterior_horn_of_spinal_cord ZFA:0000702 neuronames:1751 anterior gray column of spinal cord anterior gray horn of spinal cord anterior grey column of spinal cord anterior horn spinal cord anterior horn spinal cord ventral horn ventral gray column of spinal cord ventral gray matter of spinal cord ventral grey column of spinal cord ventral grey horn ventral horn spinal cord ventral region of spinal cord ventral spinal cord uberon anterior column anterior column of the spinal cord anterior horn (spinal cord) ventral horn of the spinal cord UBERON:0002257 ventral horn of spinal cord UBERON:0002257 The ventral grey column of the spinal cord[MP]. The neurons of the ventral region of the mature spinal cord participate in motor output[GO]. GO:0021517 MP:0005112 Wikipedia:Anterior_horn_of_spinal_cord https://sourceforge.net/tracker/?group_id=36855&atid=440764 anterior gray column of spinal cord FMA:256541 anterior gray horn of spinal cord FMA:256541 anterior horn BIRNLEX:2668 spinal cord anterior horn BIRNLEX:2668 ventral gray column of spinal cord FMA:256541 ventral gray matter of spinal cord FMA:256541 ventral grey horn BIRNLEX:2668 ventral horn spinal cord ZFA:0000702 anterior column Wikipedia:Anterior_horn_of_spinal_cord anterior column of the spinal cord Wikipedia:Anterior_horn_of_spinal_cord anterior horn (spinal cord) Wikipedia:Anterior_horn_of_spinal_cord ventral horn of the spinal cord BAMS:VH A composite substructure of the brainstem that consists of the midbrain reticular formation, the pontine reticular formation and the medullary reticular formation ( Carpenter-1983 ). BAMS:RET EMAPA:35188 FMA:77719 MA:0003185 MESH:D012154 NLX:143558 SCTID:361552007 Wikipedia:Reticular_formation neuronames:1223 brain stem reticular formation brainstem reticular formation reticular formation (classical) reticular formation of the brainstem uberon UBERON:0002275 reticular formation UBERON:0002275 A composite substructure of the brainstem that consists of the midbrain reticular formation, the pontine reticular formation and the medullary reticular formation ( Carpenter-1983 ). NeuroNames:1223 brain stem reticular formation NeuroNames:1223 brainstem reticular formation MA:0003185 NeuroNames:1223 reticular formation (classical) NeuroNames:1223 reticular formation of the brainstem NeuroNames:1223 Stalk-like part of the brain that includes amongst its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain[ZFA,MP,generalized]. BAMS:BS BIRNLEX:1565 BTO:0000146 CALOHA:TS-0093 EFO:0001962 EMAPA:32678 EV:0100241 FMA:79876 MA:0000169 MBA:343 MESH:D001933 NCIT:C12441 SCTID:180925009 TAO:0002156 VHOG:0001457 Wikipedia:Brainstem ZFA:0001707 brain stem uberon accessory medullary lamina of pallidum UBERON:0002298 'brainstem' is a loose term that sometimes refers to the ventral parts o the brain except for any part of the telencephalon - sometimes it includes the diencephalon or subpallial telencephalon structures (ISBN:0471888893). Here we use it in a more restriced sense, to include only the medulla oblongata, pons (when present) and the midbrain tegmentum (following the ZFA definitions). brainstem UBERON:0002298 Stalk-like part of the brain that includes amongst its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain[ZFA,MP,generalized]. ISBN:0471888893 MP:0005277 Wikipedia:Brainstem ZFA:0001707 brain stem ABA:BS accessory medullary lamina of pallidum NeuroNames:236 One of the layers of the neocortex. These layers are defined by distinctive populations of cells based on somata size, shape, or density, that are aligned into sheets. cortical layer ABA:CTX1-6b EMAPA:35588 FMA:83138 MA:0000186 layer of neocortex neocortex layer uberon cerebral cortex layer lamina of neocortex UBERON:0002301 layer of neocortex UBERON:0002301 One of the layers of the neocortex. These layers are defined by distinctive populations of cells based on somata size, shape, or density, that are aligned into sheets. ISBN-10:0-87893-742-0 PMID:29081739 http://orcid.org/0000-0002-6601-2165 layer of neocortex FMA:83138 neocortex layer MA:0000186 cerebral cortex layer MA:0000186 lamina of neocortex FMA:83138 The atrial part of middle layer of the heart, comprised of involuntary muscle. EFO:0003087 EMAPA:32746 FMA:83509 MA:0000081 SCTID:191910002 TAO:0001374 VHOG:0000602 ZFA:0001374 atrial myocardium atrium myocardium uberon atrium cardiac muscle UBERON:0002302 myocardium of atrium UBERON:0002302 The atrial part of middle layer of the heart, comprised of involuntary muscle. ISBN:0-683-40008-8 MP:0010493 atrial myocardium ZFA:0001374 atrium cardiac muscle VHOG:0000602 A neural nucleus that is part of the brain. EMAPA:35185 FMA:83840 MA:0000811 NCIT:C49346 SCTID:426465002 ZFA:0005575 brain nucleus uberon UBERON:0002308 nucleus of brain UBERON:0002308 A neural nucleus that is part of the brain. http://orcid.org/0000-0002-6601-2165 The ridge-shaped grey matter of the spinal cord that extends longitudunally through the center of each half of the spinal cord, and are largely or entirely composed of nerve cell bodies and their dendrites and some supportive tissue. BAMS:Scgrey DHBA:146035048 EMAPA:35792 FMA:256580 MA:0000002 NCIT:C32696 NLXANAT:100204 SCTID:279441003 neuronames:2619 gray matter of spinal cord gray substance of spinal cord grey matter of spinal cord grey substance of spinal cord spinal cord gray matter spinal cord grey matter spinal cord grey substance uberon UBERON:0002315 gray matter of spinal cord UBERON:0002315 The ridge-shaped grey matter of the spinal cord that extends longitudunally through the center of each half of the spinal cord, and are largely or entirely composed of nerve cell bodies and their dendrites and some supportive tissue. MP:0008503 gray matter of spinal cord OBOL:automatic gray substance of spinal cord FMA:256580 spinal cord gray matter OBOL:automatic spinal cord grey substance OBOL:automatic Neural tissue consisting of myelinated axons connecting grey matter areas of the central nervous system. AEO:0000139 AEO:0001011 EMAPA:35927 FMA:83929 HBA:9218 MA:0001135 NCIT:C33892 NLX:412 NLXANAT:101177 PBA:294022044 TAO:0000145 TAO:0002142 TAO:0002143 VHOG:0001764 Wikipedia:White_matter ZFA:0001682 neuronames:2870 CNS tract/commissure neuronal white matter white matter of neuraxis white substance uberon CNS tracts and commissures CNS white matter white mater UBERON:0002316 white matter UBERON:0002316 Neural tissue consisting of myelinated axons connecting grey matter areas of the central nervous system. Wikipedia:White_matter https://orcid.org/0000-0002-6601-2165 CNS tract/commissure ZFA:0001682 neuronal white matter AEO:0001011 white matter of neuraxis FMA:83929 CNS tracts and commissures TAO:0000145 CNS white matter TAO:0002143 white mater VHOG:0001764 The regions of the spinal cord that are largely or entirely composed of myelinated nerve cell axons and contain few or no neural cell bodies or dendrites. BAMS:SCwhite DHBA:146035088 EMAPA:35795 FMA:83945 MA:0000910 NCIT:C33893 SCTID:279436006 spinal cord white matter spinal cord white matter of neuraxis spinal cord white substance white matter of neuraxis of spinal cord white substance of spinal cord uberon UBERON:0002318 white matter of spinal cord UBERON:0002318 The regions of the spinal cord that are largely or entirely composed of myelinated nerve cell axons and contain few or no neural cell bodies or dendrites. MP:0008027 spinal cord white matter of neuraxis OBOL:automatic spinal cord white substance OBOL:automatic white matter of neuraxis of spinal cord OBOL:automatic white substance of spinal cord OBOL:automatic The cavity within the body of all animals higher than the coelenterates and certain primitive worms, formed by the splitting of the embryonic mesoderm into two layers. In mammals it forms the peritoneal, pleural, and pericardial cavities. UBERON:0000169 body cavity AEO:0000186 BTO:0001707 EHDAA2:0000267 FMA:85006 NCIT:C25444 RETIRED_EHDAA2:0003186 SCTID:361348008 TAO:0001438 galen:BodyCavity coelomic cavity coelomic cavity lumen main body cavity space of body compartment ventral body cavity uberon celom coelom coelome hemocoel UBERON:0002323 EDITOR_NOTE check the FMA placement here; ncit placement of body cavity here probably not correct coelemic cavity lumen UBERON:0002323 The cavity within the body of all animals higher than the coelenterates and certain primitive worms, formed by the splitting of the embryonic mesoderm into two layers. In mammals it forms the peritoneal, pleural, and pericardial cavities. BTO:0001707 body cavity BTO:0001707 coelomic cavity EHDAA2:0000267 coelomic cavity lumen EHDAA2:0000267 space of body compartment FMA:85006 ventral body cavity NCBITaxon:7742 celom BTO:0001707 coelome BTO:0001707 hemocoel FBbt:00005060 Any muscle organ that is part of a back [Automatically generated definition]. EMAPA:35161 FMA:85216 MA:0000496 back muscle back muscle organ muscle organ of back uberon UBERON:0002324 muscle of back UBERON:0002324 Any muscle organ that is part of a back [Automatically generated definition]. OBOL:automatic back muscle organ OBOL:automatic muscle organ of back OBOL:automatic A flexible rod-shaped body found in embryos of all chordates. It is composed of cells derived from the mesoderm and defines the primitive axis of the embryo. In some chordates, it persists throughout life as the main axial support of the body, while in most vertebrates it becomes the nucleus pulposus of the intervertebral disc. The notochord is found ventral to the neural tube. AAO:0000327 BTO:0001768 CALOHA:TS-0690 EHDAA2:0001277 EHDAA:1241 EHDAA:6021 EMAPA:16191 EV:0100002 FMA:85521 GAID:1311 MAT:0000281 MESH:D009672 NCIT:C12463 SCTID:308820002 TAO:0000135 VHOG:0000199 VSAO:0000032 Wikipedia:Notochord XAO:0000055 ZFA:0000135 http://evolution.berkeley.edu/evolibrary/images/history/notochords.jpg embryonic notocord notocord uberon UBERON:0002328 The notochord appears early in embryogeny and plays an important role in promoting or organizing the embryonic development of nearby structures. In most adult chordates the notochord disappears or becomes highly modified. In some non-vertebrate chordates and fishes the notochord persists as a laterally flexible but incompressible skeletal rod that prevents telescopic collapse of the body during swimming[TOLWEB] notochord UBERON:0002328 A flexible rod-shaped body found in embryos of all chordates. It is composed of cells derived from the mesoderm and defines the primitive axis of the embryo. In some chordates, it persists throughout life as the main axial support of the body, while in most vertebrates it becomes the nucleus pulposus of the intervertebral disc. The notochord is found ventral to the neural tube. ISBN:0815318960 Wikipedia:Notochord http://tolweb.org/Chordata/2499 https://github.com/obophenotype/uberon/issues/25 https://github.com/obophenotype/uberon/issues/271 notocord ZFA:0000135 Somites are spheres of epithelial cells that form sequentially along the anterior-posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. mesodermal cluster AAO:0010569 AEO:0001015 BTO:0001558 EHDAA2:0003436 EHDAA:366 EHDAA:699 EMAPA:31169 FMA:85522 GAID:1306 MAT:0000068 MESH:D019170 MIAA:0000068 NCIT:C34302 TAO:0000155 VHOG:0000191 Wikipedia:Somite XAO:0000058 ZFA:0000155 uberon epimere epimere mesoderm epithelial somite somitic mesoderm UBERON:0002329 When the somite becomes segmented from the segmental plate, it is composed of an epithelial sac enclosing mesenchymal somitocoel cells. Thereafter the somite differentiates into two parts, the ventro-medial mesenchymal sclerotome and the dorso-lateral epithelial dermomyotome. This change in the epithelial somite depends on surrounding tissue [PMID:15906248] somite UBERON:0002329 Somites are spheres of epithelial cells that form sequentially along the anterior-posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. DOI:10.1111/j.1439-0426.2012.01987.x Wikipedia:Somite mesodermal cluster GO:0001756 epimere ISBN:0073040584 epithelial somite https://github.com/obophenotype/uberon/wiki/The-neural-crest Anatomical system that consists of the glands and parts of glands that produce exocrine secretions and help to integrate and control bodily metabolic activity. Exocrine glands are glands that secrete their products (hormones) into ducts (duct glands). They are the counterparts to endocrine glands, which secrete their products (hormones) directly into the bloodstream (ductless glands) or release hormones (paracrines) that affect only target cells nearby the release site. [Wikipedia]. CALOHA:TS-2057 EHDAA2:0002225 EMAPA:35329 FMA:85539 MA:0002411 NCIT:C12957 Wikipedia:Exocrine_gland WikipediaCategory:Exocrine_system exocrine glandular system uberon UBERON:0002330 exocrine system UBERON:0002330 Anatomical system that consists of the glands and parts of glands that produce exocrine secretions and help to integrate and control bodily metabolic activity. Exocrine glands are glands that secrete their products (hormones) into ducts (duct glands). They are the counterparts to endocrine glands, which secrete their products (hormones) directly into the bloodstream (ductless glands) or release hormones (paracrines) that affect only target cells nearby the release site. [Wikipedia]. Wikipedia:Exocrine_gland exocrine glandular system EHDAA2:0002225 An arterial trunk which is continuous with the heart and branches into the pulmonary arteries. EHDAA2:0001576 EHDAA:9831 EMAPA:17015 FMA:8612 MA:0002033 NCIT:C116918 VHOG:0001134 galen:PulmonaryTrunk pulmonary artery (trunk) trunk of pulmonary arterial tree uberon main pulmonary artery UBERON:0002333 pulmonary trunk UBERON:0002333 An arterial trunk which is continuous with the heart and branches into the pulmonary arteries. http://orcid.org/0000-0002-6601-2165 main pulmonary artery Wikipedia:Pulmonary_artery A lamina propria that is part of a bronchus [Automatically generated definition]. EMAPA:35194 FMA:86619 MA:0001836 NCIT:C49212 bronchi lamina propria bronchi lamina propria mucosa bronchi lamina propria mucosae bronchial trunk lamina propria bronchial trunk lamina propria mucosa bronchial trunk lamina propria mucosae bronchus lamina propria bronchus lamina propria mucosa bronchus lamina propria mucosae lamina propria mucosa of bronchi lamina propria mucosa of bronchial trunk lamina propria mucosa of bronchus lamina propria mucosae of bronchi lamina propria mucosae of bronchial trunk lamina propria mucosae of bronchus lamina propria of bronchi lamina propria of bronchial trunk uberon bronchial lamina propria UBERON:0002338 lamina propria of bronchus UBERON:0002338 A lamina propria that is part of a bronchus [Automatically generated definition]. OBOL:automatic bronchi lamina propria OBOL:automatic bronchi lamina propria mucosa OBOL:automatic bronchi lamina propria mucosae OBOL:automatic bronchial trunk lamina propria OBOL:automatic bronchial trunk lamina propria mucosa OBOL:automatic bronchial trunk lamina propria mucosae OBOL:automatic bronchus lamina propria mucosa OBOL:automatic bronchus lamina propria mucosae OBOL:automatic lamina propria mucosa of bronchi OBOL:automatic lamina propria mucosa of bronchial trunk OBOL:automatic lamina propria mucosa of bronchus OBOL:automatic lamina propria mucosae of bronchi OBOL:automatic lamina propria mucosae of bronchial trunk OBOL:automatic lamina propria mucosae of bronchus OBOL:automatic lamina propria of bronchi OBOL:automatic lamina propria of bronchial trunk OBOL:automatic bronchial lamina propria EMAPA:35194 A specialized region of ectoderm found between the neural ectoderm (neural plate) and non-neural ectoderm and composed of highly migratory pluripotent cells that delaminate in early embryonic development from the dorsal neural tube and give rise to an astounding variety of differentiated cell types[MP]. AAO:0010578 BTO:0001764 CALOHA:TS-0676 EHDAA2:0004419 EMAPA:32737 FMA:86666 GAID:1310 MAT:0000066 MESH:D009432 MIAA:0000066 NCIT:C34222 SCTID:361462002 VHOG:0000057 Wikipedia:Neural_crest XAO:0000048 ZFA:0000045 neuronames:1366 uberon neural crest material UBERON:0002342 Gene notes: Many factors and genes, such as Pax3 (Tremblay et al., 1995), slug (Nieto et al., 1994), AP-2 (Zhang et al., 1996; Schorle et al., 1996), and Wnt-1/3a (Ikeya et al., 1997) are expressed in the dorsal most region of the neural tube, and have been shown to be involved in the generation of neural crest cells. neural crest UBERON:0002342 A specialized region of ectoderm found between the neural ectoderm (neural plate) and non-neural ectoderm and composed of highly migratory pluripotent cells that delaminate in early embryonic development from the dorsal neural tube and give rise to an astounding variety of differentiated cell types[MP]. MP:0009846 neural crest material VHOG:0000057 Set of all muscles in abdomen. FMA:71294 FMA:86917 TAO:0001327 ZFA:0001327 abdominal musculature muscle group of abdomen muscles of abdomen musculature of abdomen musculature of abdominal wall set of muscles of abdomen uberon UBERON:0002343 abdomen musculature UBERON:0002343 Set of all muscles in abdomen. OBOL:automatic muscle group of abdomen FMA:71294 muscles of abdomen FMA:71294 musculature of abdominal wall FMA:86917 set of muscles of abdomen FMA:71294 The part of the aorta that extends from the arch of the aorta to the diaphragm, and from which arises numerous branches that supply oxygenated blood to the chest cage and the organs within the chest. EFO:0002527 EMAPA:18605 FMA:87217 MA:0002572 SCTID:181301002 uberon UBERON:0002345 descending thoracic aorta UBERON:0002345 The part of the aorta that extends from the arch of the aorta to the diaphragm, and from which arises numerous branches that supply oxygenated blood to the chest cage and the organs within the chest. MP:0009868 Embryonic ectoderm that gives rise to nervous tissue. AAO:0011074 BILA:0000039 CALOHA:TS-1212 EHDAA2:0001248 EHDAA:1498 EHDAA:255 EMAPA:16073 EV:0100004 FMA:87657 MAT:0000176 MIAA:0000176 NCIT:C34228 TAO:0001120 VHOG:0000150 Wikipedia:Neuroectoderm XAO:0000042 ZFA:0001120 neural ectoderm neuroectoderm uberon neuaral ectoderm presumptive central nervous system ventral neurogenic region UBERON:0002346 neurectoderm UBERON:0002346 Embryonic ectoderm that gives rise to nervous tissue. Wikipedia:Neuroectoderm ventral neurogenic region VHOG:0000150 A region of the serous membrane that forms the innermost layer of the pericardium and the outer surface of the heart. AAO:0010409 EHDAA2:0002202 FMA:9461 NCIT:C13164 TAO:0005057 VHOG:0000119 Wikipedia:Epicardium XAO:0000316 ZFA:0005057 galen:Epicardium heart epicardium visceral serous pericardium of heart visceral serous pericardium proper uberon pericardium visceral mesothelium UBERON:0002348 EDITOR_NOTE TODO - check links with UBERON:0002425 visceral serous pericardium. develops from proepicardium. WP:Epicardium -- When considered as a part of the pericardium, it is the inner layer, or visceral pericardium, continuous with the serous layer. epicardium UBERON:0002348 A region of the serous membrane that forms the innermost layer of the pericardium and the outer surface of the heart. http://orcid.org/0000-0002-6601-2165 visceral serous pericardium of heart FMA:9461 visceral serous pericardium proper FMA:9461 pericardium visceral mesothelium EMAPA:16589 The middle layer of the heart, comprised mainly of striated cardiac muscle fibers. AAO:0010410 BSA:0000089 BTO:0000901 CALOHA:TS-0440 EFO:0000819 EHDAA2:0004150 EV:0100022 FMA:9462 GAID:173 MA:0000164 MAT:0000453 MESH:D009206 NCIT:C12371 RETIRED_EHDAA2:0001220 SCTID:362012001 TAO:0001319 VHOG:0000083 Wikipedia:Myocardium XAO:0000065 ZFA:0001319 galen:Myocardium heart myocardium muscle of heart uberon cardiac muscle heart muscle UBERON:0002349 EDITOR_NOTE TODO - check 'Myocardum proper' in FMA. We superclass the more generic class for now. FMA has is_a muscle layer - should we add this? ZFA and BTO both have is_a 'cardiac muscle' (tissue?). But in U we also follow FMA and have cardiac muscle tissue of myocardium (there is also Fibrocollagenous connective tissue of myocardium), which would be identical (see issue-10). Note that GO also treats left/right ventricular cardiac muscle tissue synonymous with ventricular myocardium myocardium UBERON:0002349 The middle layer of the heart, comprised mainly of striated cardiac muscle fibers. ISBN:0-683-40008-8 MP:0005329 muscle of heart FMA:9462 cardiac muscle ZFA:0001319 heart muscle FMA:9462 ZFA:0001319 The cardiac conduction system consists of specialized cardiomyocytes that regulate the frequency of heart beat[GO]. EFO:0003909 EHDAA2:0004185 EMAPA:35428 EV:0100025 FMA:9476 MA:0000094 MESH:D006329 SCTID:281489000 TAO:0005063 VHOG:0001271 ZFA:0005063 cardiac conducting system cardiac conduction system cardiac impulse conducting system cardionector heart conduction system impulse conducting system uberon central conduction system UBERON:0002350 conducting system of heart UBERON:0002350 The cardiac conduction system consists of specialized cardiomyocytes that regulate the frequency of heart beat[GO]. GO:0003161 cardiac conducting system VHOG:0001271 cardiac impulse conducting system GO:0003161 heart conduction system GO:0003161 impulse conducting system MA:0000094 The part of the cardiac conduction system that controls the timing of heart muscle contraction. It relays electrical signals to the AV node[GO]. Subdivision of conducting system of heart at the junction of the right atrium and the superior vena cava, around the sinoatrial nodal branch of right coronary artery and is continuous with the internodal tract[FMA]. BTO:0004358 EHDAA2:0004184 EMAPA:35772 FMA:9477 GAID:561 MA:0000097 MESH:D012849 NCIT:C33555 SCTID:277687007 TAO:0005069 Wikipedia:Sinoatrial_node ZFA:0005069 Koch's node SA nodal muscle tissue SA node cardiac pacemaker node of Keith-Flack sinoatrial node sinu-atrial node sinuatrial nodal muscle tissue sinuatrial node sinus node sinus node of Keith and Flack uberon UBERON:0002351 WP:Heart states: "The SA node is found in all amniotes but not in more primitive vertebrates. In these animals, the muscles of the heart are relatively continuous and the sinus venosus coordinates the beat which passes in a wave through the remaining chambers. Indeed, since the sinus venosus is incorporated into the right atrium in amniotes, it is likely homologous with the SA node. In teleosts, with their vestigial sinus venosus, the main centre of coordination is, instead, in the atrium.". Note however that ZFA has SA node. sinoatrial node UBERON:0002351 The part of the cardiac conduction system that controls the timing of heart muscle contraction. It relays electrical signals to the AV node[GO]. Subdivision of conducting system of heart at the junction of the right atrium and the superior vena cava, around the sinoatrial nodal branch of right coronary artery and is continuous with the internodal tract[FMA]. GO:0003163 Wikipedia:Sinoatrial_node Koch's node FMA:9477 SA nodal muscle tissue FMA:9477 SA node FMA:9477 cardiac pacemaker FMA:9477 node of Keith-Flack FMA:9477 sinoatrial node FMA:9477 sinu-atrial node FMA:9477 sinuatrial nodal muscle tissue FMA:9477 sinuatrial node FMA:9477 sinus node FMA:9477 sinus node of Keith and Flack FMA:9477 An area of conducting tissue between the atria and the ventricles of the heart that conducts the normal electrical impulse from the atria to the ventricles. BTO:0005689 EFO:0000276 EHDAA2:0004183 EMAPA:35153 FMA:9478 GAID:558 MA:0000095 MAT:0000498 MESH:D001283 NCIT:C32161 SCTID:277688002 TAO:0005070 VHOG:0001474 Wikipedia:Atrioventricular_node ZFA:0005070 AV nodal muscle tissue AV node Aschoff-Tawara node atrioventricular nodal muscle tissue node of Tawara uberon A-V node atrio-ventricular node atriovetricular node downstream pacemaker UBERON:0002352 atrioventricular node UBERON:0002352 An area of conducting tissue between the atria and the ventricles of the heart that conducts the normal electrical impulse from the atria to the ventricles. UBERON:cjm Wikipedia:Atrioventricular_node AV nodal muscle tissue FMA:9478 AV node FMA:9478 MA:0000095 Aschoff-Tawara node FMA:9478 atrioventricular nodal muscle tissue FMA:9478 node of Tawara FMA:9478 A-V node EMAPA:35153 atrio-ventricular node EMAPA:35153 atriovetricular node TAO:0005070 downstream pacemaker ZFA:0005070 The cardiac Purkinje fiber is part of the cardiac conduction system that receives signals from the bundle of His and innervates the ventricular cardiac muscle. UBERON:0004147 BTO:0001735 EMAPA:35718 FMA:9492 GAID:560 MA:0000096 MESH:D011690 NCIT:C33430 Wikipedia:Purkinje_fiber Purkinje fiber cardiac Purkinje fiber subendocardial branch uberon heart Purkinje fiber UBERON:0002354 cardiac Purkinje fiber UBERON:0002354 The cardiac Purkinje fiber is part of the cardiac conduction system that receives signals from the bundle of His and innervates the ventricular cardiac muscle. GO:0003165 Purkinje fiber FMA:9492 MA:0000096 cardiac Purkinje fiber BTO:0001735 GO:0003165 subendocardial branch Wikipedia:Purkinje_fiber heart Purkinje fiber BTO:0001735 Serous membrane which is divided into parietal and visceral serous pericardium. EMAPA:19030 FMA:9582 MA:0002739 SCTID:243954002 Wikipedia:Serous_pericardium serous portion of pericardium uberon UBERON:0002357 serous pericardium UBERON:0002357 Serous membrane which is divided into parietal and visceral serous pericardium. Wikipedia:Serous_pericardium http://orcid.org/0000-0002-6601-2165 serous portion of pericardium FMA:9582 A serous membrane that lines the peritoneal cavity[VHOG,modified]. AAO:0010814 BTO:0001472 CALOHA:TS-2072 EV:0100087 FMA:9584 GAID:18 MA:0000449 MESH:D010537 NCIT:C12770 TAO:0005120 VHOG:0001257 Wikipedia:Peritoneum XAO:0000139 ZFA:0005120 galen:Peritoneum uberon peritonaeum UBERON:0002358 peritoneum UBERON:0002358 A serous membrane that lines the peritoneal cavity[VHOG,modified]. VHOG:0001257 peritonaeum VHOG:0001257 Membrane organ which is attached to the pericardial sac proper and the central tendon of diaphragm and is continuous with the pretracheal fascia.[FMA]. EMAPA:19029 FMA:9586 MA:0002738 SCTID:243953008 Wikipedia:Fibrous_pericardium fibrous portion of pericardium uberon UBERON:0002359 fibrous pericardium UBERON:0002359 Membrane organ which is attached to the pericardial sac proper and the central tendon of diaphragm and is continuous with the pretracheal fascia.[FMA]. FMA:9586 Membrane organ that surrounds the brain and the spinal cord. BTO:0000144 CALOHA:TS-1177 EFO:0000867 EMAPA:32660 FMA:9589 GAID:687 MA:0001113 MAT:0000113 MESH:D008578 NCIT:C12348 NLXANAT:090204 TAO:0001355 VHOG:0001295 Wikipedia:Meninx ZFA:0001355 layer of meninges meningeal layer meninx primitiva uberon UBERON:0002360 meninx UBERON:0002360 Membrane organ that surrounds the brain and the spinal cord. FMA:9589 Wikipedia:Meninx http://www.shsu.edu/~bio_mlt/Chap15.html meninx primitiva VHOG:0001295 Thick, fibrous meningeal covering surrounding the brain and spinal cord. It is the outermost of the three meningeal coverings. It consists of two layers: the periosteal dura linking the inner surface of the skull and the meningeal dura that lies above the arachnoid dural membrane. The meningeal layer draws away from the periosteal layer and certain locations to form the dural reflections. BTO:0001637 CALOHA:TS-2008 EMAPA:32664 FMA:9592 GAID:691 MA:0001115 MESH:D004388 NCIT:C32488 NLXANAT:090206 SCTID:362301008 Wikipedia:Dura_mater neuronames:1462 dura mater of neuraxis pachymeninges uberon dura UBERON:0002363 dura mater UBERON:0002363 Thick, fibrous meningeal covering surrounding the brain and spinal cord. It is the outermost of the three meningeal coverings. It consists of two layers: the periosteal dura linking the inner surface of the skull and the meningeal dura that lies above the arachnoid dural membrane. The meningeal layer draws away from the periosteal layer and certain locations to form the dural reflections. NLXANAT:090206 pachymeninges NLXANAT:090206 dura BTO:0001637 A gland that secretes products (excluding hormones and other chemical messengers) into ducts (duct glands) which lead directly into the external environment[WP]. Typical exocrine glands include sweat glands, salivary glands, mammary glands, stomach, liver, pancreas. AEO:0000097 BTO:0000765 CALOHA:TS-2012 EHDAA2:0003097 EMAPA:35327 FMA:9596 GAID:34 MA:0002564 MESH:D005088 NCIT:C12712 SCTID:115976003 Wikipedia:Exocrine_gland ducted gland uberon UBERON:0002365 exocrine gland UBERON:0002365 A gland that secretes products (excluding hormones and other chemical messengers) into ducts (duct glands) which lead directly into the external environment[WP]. Typical exocrine glands include sweat glands, salivary glands, mammary glands, stomach, liver, pancreas. Wikipedia:Exocrine_gland ducted gland AEO:0000097 Endocrine glands are glands of the endocrine system that secrete their products directly into the circulatory system rather than through a duct.[WP, modified]. AEO:0000098 BTO:0001488 CALOHA:TS-1300 EHDAA2:0003098 EMAPA:35999 FMA:9602 GAID:335 MA:0002563 MESH:D004702 NCIT:C12704 SCTID:40818001 Wikipedia:Endocrine_gland ductless gland glandula endocrina uberon ductless gland UBERON:0002368 endocrine gland UBERON:0002368 Endocrine glands are glands of the endocrine system that secrete their products directly into the circulatory system rather than through a duct.[WP, modified]. Wikipedia:Endocrine_gland ductless gland AEO:0000098 ductless gland Wikipedia:Ductless_gland The soft tissue that fills the cavities of bones. AAO:0011007 BTO:0000141 BTO:0000829 CALOHA:TS-0087 EFO:0000868 EMAPA:32760 EV:0100046 FMA:9608 GAID:1287 MA:0000134 MAT:0000084 MESH:D001853 MIAA:0000084 NCIT:C12431 SCTID:421320006 VHOG:0001218 Wikipedia:Bone_marrow XAO:0000123 galen:BoneMarrow uberon medulla of bone medullary bone UBERON:0002371 bone marrow UBERON:0002371 The soft tissue that fills the cavities of bones. MGI:cwg MP:0002397 medulla of bone BTO:0000141 Any skeletal muscle that is part of the head region. UBERON:0003899 AAO:0000107 BTO:0000021 EFO:0003524 EHDAA2:0000322 EMAPA:18172 FMA:9616 MA:0000578 SCTID:244718003 ZFA:0001652 cephalic muscle cephalic musculature head muscle head muscle organ muscle of head muscle organ of adult head muscle organ of head musculus caput adult head muscle organ uberon cranial muscle head muscles UBERON:0002376 defined generically so could in theory encompass FBbt:00003260 'skeletal muscle of head', or the muscle of a starfish Aristotle's lantern, but we restrict this to craniates. Skeletal muscles of the head originate from the non-segmented head mesoderm (Noden, 1983; Wachtler et al., 1984) cranial muscle UBERON:0002376 Any skeletal muscle that is part of the head region. http://orcid.org/0000-0002-6601-2165 cephalic muscle ZFA:0001652 head muscle MA:0000578 head muscle organ OBOL:automatic muscle of head FMA:9616 muscle organ of adult head OBOL:automatic muscle organ of head OBOL:automatic adult head muscle organ OBOL:automatic cranial muscle ZFA:0001652 Any muscle that is part of the cervical (neck) region. FMA:9617 GAID:149 MA:0000587 MESH:D009334 NCIT:C33163 muscle organ of neck muscle organ of neck (volume) neck (volume) muscle organ neck muscle neck muscle organ uberon UBERON:0002377 muscle of neck UBERON:0002377 Any muscle that is part of the cervical (neck) region. http://orcid.org/0000-0002-6601-2165 muscle organ of neck OBOL:automatic muscle organ of neck (volume) OBOL:automatic neck (volume) muscle organ OBOL:automatic neck muscle organ OBOL:automatic Muscle (organ) which is a part of the abdomen. Examples: external oblique, rectus abdominis. BTO:0001261 EMAPA:35103 FMA:9620 GAID:89 MA:0000520 MESH:D000009 NCIT:C32040 SCTID:361352008 Wikipedia:Abdominal_muscle abdomen muscle abdomen muscle organ abdominal muscle abdominal wall muscle muscle organ of abdomen uberon abdominal wall musculature UBERON:0002378 muscle of abdomen UBERON:0002378 Muscle (organ) which is a part of the abdomen. Examples: external oblique, rectus abdominis. Wikipedia:Abdominal_muscle abdomen muscle organ OBOL:automatic muscle organ of abdomen OBOL:automatic abdominal wall musculature EMAPA:35103 Tissue with cells that deposit non-polarized extracellular matrix including connective tissue fibers and ground substance. AAO:0000098 BTO:0000421 CALOHA:TS-2009 EFO:0000952 EMAPA:35251 FMA:9640 GAID:100 MA:0000011 MAT:0000301 MESH:D003238 MIAA:0000301 NCIT:C12374 SCTID:361919005 TAO:0001641 VSAO:0000017 XAO:0001017 ZFA:0001632 galen:ConnectiveTissue portion of connective tissue textus connectivus uberon Bindegewebe UBERON:0002384 connective tissue UBERON:0002384 Tissue with cells that deposit non-polarized extracellular matrix including connective tissue fibers and ground substance. GO_REF:0000034 PSPUB:0000170 VSAO:0000017 http://dx.plos.org/10.1371/journal.pone.0051070 https://github.com/obophenotype/uberon/issues/23 portion of connective tissue FMA:9640 Bindegewebe BTO:0000421 Muscle tissue is a contractile tissue made up of actin and myosin fibers[GO]. AAO:0000306 AEO:0000122 CALOHA:TS-0642 EHDAA2:0003122 EMAPA:32715 FMA:9641 MA:0002437 MESH:D009132 NCIT:C12435 SCTID:91727004 Wikipedia:Muscle_tissue galen:MuscleTissue portion of muscle tissue textus muscularis uberon UBERON:0002385 Vertebrate muscle is categorized into three major muscle types defined by their structural and functional properties: skeletal, cardiac and smooth. In Dmel the counterparts are somatic, heart/cardiac and visceral. Here we take a cell type based approach. muscle tissue UBERON:0002385 Muscle tissue is a contractile tissue made up of actin and myosin fibers[GO]. GO:0060537 Wikipedia:Muscle_tissue https://sourceforge.net/tracker/index.php?func=detail&aid=2801266&group_id=36855&atid=440764 portion of muscle tissue FMA:9641 Anatomical system that is involved in the production of hematopoietic cells. AAO:0011002 BTO:0000570 CALOHA:TS-0449 EFO:0000798 EMAPA:35402 EV:0100045 FMA:9667 GAID:1008 MA:0002434 MAT:0000022 MESH:D006413 MIAA:0000022 NCIT:C12909 SCTID:362587009 TAO:0005023 VHOG:0001624 Wikipedia:Haematopoiesis XAO:0000122 ZFA:0005023 haematological system haemopoietic system organa haemopoietica uberon Blutbildungssystem haematopoietic system hematological system hematolymphoid system hemopoietic system UBERON:0002390 hematopoietic system UBERON:0002390 Anatomical system that is involved in the production of hematopoietic cells. Wikipedia:Haematopoiesis Blutbildungssystem BTO:0000570 The outer serous membrane of the pulmonary pleural. EMAPA:16776 FMA:9733 MA:0002488 NCIT:C33273 SCTID:361998003 VHOG:0001495 Wikipedia:Parietal_pleura uberon UBERON:0002400 the part of the pleura external to the visceral pleura. It lines the inner surface of the chest wall, covers the diaphragm, and is reflected over the structures occupying the middle of the thorax parietal pleura UBERON:0002400 The outer serous membrane of the pulmonary pleural. UBERON:cjm Wikipedia:Pulmonary_pleurae The inner serous membrane of the pulmonary pleural. The visceral pleura lines the lungs. EHDAA2:0002205 EMAPA:16777 FMA:9734 MA:0002489 NCIT:C33881 SCTID:361997008 VHOG:0001496 pleura visceralis (pulmonalis) pulmonary visceral pleura uberon lung mesothelium lung pleura UBERON:0002401 visceral pleura UBERON:0002401 The inner serous membrane of the pulmonary pleural. The visceral pleura lines the lungs. UBERON:cjm Wikipedia:Pulmonary_pleurae lung mesothelium EHDAA2:0002205 The fluid-filled cavity that lies between the visceral and parietal pleurae. BTO:0004422 EHDAA2:0001475 EMAPA:16773 EMAPA:16774 FMA:9740 GAID:95 MA:0000055 MESH:D035422 NCIT:C12840 SCTID:361999006 VHOG:0000581 Wikipedia:Pleural_cavity uberon UBERON:0002402 pleural cavity UBERON:0002402 The fluid-filled cavity that lies between the visceral and parietal pleurae. Wikipedia:Pleural_cavity https://github.com/obophenotype/uberon/issues/86 Anatomical system that protects the body from foreign substances, cells, and tissues by producing the immune response and that includes especially the thymus, spleen, lymphoid tissue, lymphocytes including the B cells and T cells, and antibodies. AAO:0011003 BILA:0000104 BTO:0005810 FMA:9825 GAID:328 MA:0002711 MESH:D007107 NCIT:C12735 SCTID:362590003 TAO:0001159 VHOG:0001247 Wikipedia:Immune_system XAO:0003152 ZFA:0001159 uberon UBERON:0002405 immune system UBERON:0002405 Anatomical system that protects the body from foreign substances, cells, and tissues by producing the immune response and that includes especially the thymus, spleen, lymphoid tissue, lymphocytes including the B cells and T cells, and antibodies. Wikipedia:Immune_system A double-walled sac containing the heart and the roots of the great vessels. FMA:9868 RETIRED_EHDAA2:0001443 SCTID:361326002 uberon pericardium UBERON:0002406 pericardial sac UBERON:0002406 A double-walled sac containing the heart and the roots of the great vessels. Wikipedia:Pericardium https://github.com/obophenotype/uberon/issues/86 The combination of pericardial sac (a double-walled sac containing the heart and the roots of the great vessels) plus fibrous pericardium. AAO:0010817 BSA:0000090 BTO:0000717 CALOHA:TS-0761 EFO:0000820 EHDAA:5376 EV:0100023 FMA:9869 GAID:569 MA:0000099 MAT:0000454 MESH:D010496 NCIT:C13005 RETIRED_EHDAA2:0001443 SCTID:181295003 VHOG:0001280 Wikipedia:Pericardium XAO:0004182 ZFA:0000054 galen:Pericardium uberon UBERON:0002407 pericardium UBERON:0002407 The combination of pericardial sac (a double-walled sac containing the heart and the roots of the great vessels) plus fibrous pericardium. Wikipedia:Pericardium http://orcid.org/0000-0002-6601-2165 Parietal serous membrane which is part of the pericardium and forms the outer layer of the pericardial sac. EHDAA:3422 EHDAA:5378 EMAPA:19031 FMA:9870 MA:0000483 NCIT:C94500 SCTID:243956000 VHOG:0000537 Wikipedia:Parietal_pericardium lamina parietalis (pericardii serosum) parietal layer of serous pericardium parietal pericardium uberon UBERON:0002408 parietal serous pericardium UBERON:0002408 Parietal serous membrane which is part of the pericardium and forms the outer layer of the pericardial sac. http://orcid.org/0000-0002-6601-2165 parietal pericardium VHOG:0000537 Transudate contained in the pericardial cavity.[FMA]. BTO:0001016 FMA:9887 MA:0002530 Wikipedia:Pericardial_fluid uberon UBERON:0002409 pericardial fluid UBERON:0002409 Transudate contained in the pericardial cavity.[FMA]. FMA:9887 Wikipedia:Pericardial_fluid The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands[GO]. AAO:0000033 BIRNLEX:1123 BTO:0002507 CALOHA:TS-2001 EHDA:10095 EHDAA2:0000158 EHDAA:3767 EMAPA:16984 FMA:65553 GAID:706 MA:0000219 MESH:D001341 NCIT:C12673 SCTID:362481007 TAO:0001574 VHOG:0000396 Wikipedia:Autonomic_nervous_system ZFA:0001574 neuronames:2054 autonomic division of peripheral nervous system autonomic part of peripheral nervous system divisio autonomica systematis nervosi peripherici pars autonomica systematis nervosi peripherici peripheral autonomic nervous system visceral nervous system uberon UBERON:0002410 autonomic nervous system UBERON:0002410 The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands[GO]. GO:0048483 autonomic division of peripheral nervous system FMA:65553 autonomic part of peripheral nervous system FMA:65553 divisio autonomica systematis nervosi peripherici FMA:TA pars autonomica systematis nervosi peripherici FMA:TA peripheral autonomic nervous system FMA:65553 Connected anatomical system that forms a barrier between an animal and its environment. In vertebrates, the integumental system consists of the epidermis, dermis plus associated glands and adnexa such as hair and scales. In invertebrates, the integumental system may include cuticle. UBERON:0007029 AEO:0000154 BILA:0000118 CALOHA:TS-1299 CARO:0002001 EFO:0000807 EHDAA2:0000836 EHDAA2_RETIRED:0003154 EHDAA:6520 EMAPA:17524 EV:0100151 FMA:72979 HAO:0000421 MA:0000014 MAT:0000033 MESH:D034582 MIAA:0000033 NCIT:C12907 SCTID:361692004 TADS:0000108 VHOG:0000403 Wikipedia:Integumentary_system XAO:0000176 galen:Surface integumentary system uberon body surface dermal system external covering of organism organism surface surface UBERON:0002416 integumental system UBERON:0002416 Connected anatomical system that forms a barrier between an animal and its environment. In vertebrates, the integumental system consists of the epidermis, dermis plus associated glands and adnexa such as hair and scales. In invertebrates, the integumental system may include cuticle. CARO:0002001 http://orcid.org/0000-0002-6601-2165 https://github.com/obophenotype/uberon/issues/29 integumentary system FMA:72979 dermal system MIAA:0000033 organism surface EHDAA2:0003154 surface BILA:0000118 The abdominal segment of the torso. EMAPA:35104 FMA:259211 MA:0000021 SCTID:362875007 Wikipedia:Lumbar uberon abdomen/pelvis/perineum lower body lower trunk lumbar region UBERON:0002417 abdominal segment of trunk UBERON:0002417 The abdominal segment of the torso. Wikipedia:Lumbar abdomen/pelvis/perineum MA:0000021 lower body MA:0000021 lower trunk FMA:259211 lumbar region https://orcid.org/0000-0002-6601-2165 Skeletal tissue that is avascular, rich in glycosaminoglycans (GAGs) and typically includes chondrocytes within isolated lacunae. Cartilage tissue is deposited by chondroblasts. AAO:0000060 AEO:0000087 BTO:0000206 EFO:0000949 EHDAA2:0003087 EMAPA:32730 EV:0100141 FMA:37377 GAID:99 MA:0000104 MAT:0000189 MESH:D002356 MIAA:0000189 NCIT:C12373 NCIT:C32268 SCTID:309312004 TAO:0001501 VHOG:0001207 VSAO:0000040 Wikipedia:Cartilage XAO:0000170 ZFA:0005622 galen:Cartilage cartilage tissue cartilaginous tissue chondrogenic tissue uberon cartilage cartilages portion of cartilage tissue UBERON:0002418 Previous: "A portion of connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate[GO]. Regular connective tissue, which consists of chondrocytes and related cells, the intercellular matrix of which is chondrified. Examples: hyaline cartilage, fibrocartilage, elastic cartilage[FMA]. an avascular supporting and articular skeletal tissue. It also functions as the primary endoskeletal support in vertebrate embryos. Cartilage is deposited by and is composed of chondroblasts and chondrocytes separated by an extracellular matrix, which may or may not mineralize depending on cartilage type, age, or taxon[Hall and Witten]." See also FMA:71500 Set of cartilages, FMA:55107 Cartilage organ, FMA:12264 Articular cartilage. // elements made from cartilage, cartilage-like, or chondroid tissues evolved in invertebrates[H&W] cartilage tissue UBERON:0002418 Skeletal tissue that is avascular, rich in glycosaminoglycans (GAGs) and typically includes chondrocytes within isolated lacunae. Cartilage tissue is deposited by chondroblasts. GO_REF:0000034 PSPUB:0000170 VSAO:0000040 http://dx.plos.org/10.1371/journal.pone.0051070 https://github.com/obophenotype/uberon/issues/37 https://sourceforge.net/p/obo/vertebrate-skeletal-anatomy-vsao-term-requests/5 cartilage tissue FMA:37377 chondrogenic tissue VSAO:0000040 cartilages VHOG:0001207 portion of cartilage tissue FMA:37377 A gland that is part of a skin of body [Automatically generated definition]. EMAPA:35774 FMA:71878 MA:0000146 SCTID:110485007 uberon set of skin glands UBERON:0002419 skin gland UBERON:0002419 A gland that is part of a skin of body [Automatically generated definition]. OBOL:automatic set of skin glands FMA:71878 An epithelium that is part of the mouth and lines the oral cavity, typically stratified squamous, and may be para-, ortho- or non- keratinized. Primary barrier between oral environment and deeper tissues. AAO:0010357 BTO:0001775 CALOHA:TS-0715 EHDAA2:0001325 EHDAA:2187 EMAPA:16839 EMAPA:26942 FMA:265152 MA:0000344 NCIT:C49595 TAO:0000816 VHOG:0000187 XAO:0003201 ZFA:0000816 epithelium of mucosa of mouth epithelium of oral mucosa uberon UBERON:0002424 oral epithelium UBERON:0002424 An epithelium that is part of the mouth and lines the oral cavity, typically stratified squamous, and may be para-, ortho- or non- keratinized. Primary barrier between oral environment and deeper tissues. https://orcid.org/0000-0002-6601-2165 epithelium of mucosa of mouth FMA:265152 epithelium of oral mucosa FMA:265152 Visceral serous membrane which is continuous with the parietal serous pericardium and is attached to the myocardium[FMA]. EMAPA:19032 FMA:84882 MA:0000484 SCTID:243955001 VHOG:0000538 Wikipedia:Visceral_pericardium serous visceral pericardium visceral lamina of serous pericardium visceral layer of serous pericardium visceral pericardium uberon epicardium pericardium visceral mesothelium UBERON:0002425 visceral serous pericardium UBERON:0002425 Visceral serous membrane which is continuous with the parietal serous pericardium and is attached to the myocardium[FMA]. Wikipedia:Visceral_pericardium visceral pericardium VHOG:0000538 epicardium MA:0000484 pericardium visceral mesothelium EMAPA:16589 White matter that is part of a cerebral hemisphere. BAMS:cw BIRNLEX:711 BTO:0000236 CALOHA:TS-2362 EMAPA:35237 FMA:241998 FMA:256174 FMA:61822 MA:0000945 NCIT:C49347 SCTID:361691006 cerebral hemisphere white matter cerebral white matter white matter structure of cerebral hemisphere uberon hemisphere white matter region of cerebral white matter UBERON:0002437 cerebral hemisphere white matter UBERON:0002437 White matter that is part of a cerebral hemisphere. https://orcid.org/0000-0002-6601-2165 cerebral white matter MA:0000945 white matter structure of cerebral hemisphere FMA:61822 region of cerebral white matter FMA:256174 A blood vessel that is part of a choroid [Automatically generated definition]. EMAPA:17828 FMA:76550 MA:0001237 blood vessel of choroid blood vessel of choroid coat blood vessel of choroidea blood vessel of posterior uvea choroid blood vessel choroid blood vessels choroid blood vessels set choroid coat blood vessel choroidea blood vessel posterior uvea blood vessel uberon set of choroid blood vessels UBERON:0002443 cannot find singular in FMA, using Set class choroidal blood vessel UBERON:0002443 A blood vessel that is part of a choroid [Automatically generated definition]. OBOL:automatic blood vessel of choroid OBOL:automatic blood vessel of choroid coat OBOL:automatic blood vessel of choroidea OBOL:automatic blood vessel of posterior uvea OBOL:automatic choroid blood vessel OBOL:automatic choroid coat blood vessel OBOL:automatic choroidea blood vessel OBOL:automatic posterior uvea blood vessel OBOL:automatic set of choroid blood vessels FMA:76550 The small branching sprouts of the dorsal aorta that grow across the medial surface of the somite, turn right angles to grow over that surface and then fuse with other sprouts and form the vertebral arteries adjacent to the neural tube; the intersomitic arteries supply the body wall and persist in the adult as the posterior intercostal, subcostal and the lumbar arteries. UBERON:0006001 EHDAA2:0000882 EHDAA:4340 EMAPA:17616 MA:0001985 SCTID:360401001 TAO:0001061 VHOG:0000225 XAO:0004165 ZFA:0001061 intersegmental artery uberon UBERON:0002457 intersomitic artery UBERON:0002457 The small branching sprouts of the dorsal aorta that grow across the medial surface of the somite, turn right angles to grow over that surface and then fuse with other sprouts and form the vertebral arteries adjacent to the neural tube; the intersomitic arteries supply the body wall and persist in the adult as the posterior intercostal, subcostal and the lumbar arteries. MP:0010662 intersegmental artery ZFA:0001061 Arteries that supply the spinal cord. EHDAA2:0001890 EHDAA:4355 EMAPA:18241 MA:0002043 NCIT:C33587 SCTID:244228006 TAO:0000682 Wikipedia:Spinal_artery ZFA:0000682 uberon UBERON:0002458 spinal artery UBERON:0002458 Arteries that supply the spinal cord. Wikipedia:Spinal_artery https://orcid.org/0000-0002-6601-2165 A mucosa that is part of a esophagus [Automatically generated definition]. UBERON:0003345 BTO:0002859 EMAPA:26981 FMA:62996 MA:0002680 NCIT:C32538 SCTID:362127004 esophageal mucosa esophageal mucous membrane esophagus mucosa esophagus mucous membrane mucosa of esophagus mucosa of oesophagus mucous membrane of esophagus mucous membrane of oesophagus oesophageal mucosa oesophagus mucosa oesophagus mucous membrane tunica mucosa esophagi tunica mucosa oesophagi uberon tunica mucosa oesophagi UBERON:0002469 esophagus mucosa UBERON:0002469 A mucosa that is part of a esophagus [Automatically generated definition]. OBOL:automatic esophagus mucosa FMA:62996 esophagus mucous membrane OBOL:automatic mucosa of esophagus OBOL:automatic mucosa of oesophagus OBOL:automatic mucous membrane of oesophagus FMA:62996 oesophageal mucosa FMA:62996 oesophagus mucous membrane OBOL:automatic tunica mucosa oesophagi BTO:0002859 Skeletal tissue with a collagen-rich extracellular matrix vascularized, mineralized with hydroxyapatite and typically including osteocytes located in lacunae that communicate with one another by cell processes (in canaliculi). Bone is deposited by osteoblasts. CALOHA:TS-2011 EMAPA:35179 FMA:224804 MA:0002780 MESH:D001842 NCIT:C13076 VSAO:0000047 Wikipedia:Bone_tissue XAO:0004040 ZFA:0005621 galen:BoneTissue calcium tissue osseous tissue osteogenic tissue mineralized bone tissue uberon bone portion of bone tissue UBERON:0002481 bone tissue UBERON:0002481 Skeletal tissue with a collagen-rich extracellular matrix vascularized, mineralized with hydroxyapatite and typically including osteocytes located in lacunae that communicate with one another by cell processes (in canaliculi). Bone is deposited by osteoblasts. GO_REF:0000034 PSPUB:0000170 VSAO:0000047 http://dx.plos.org/10.1371/journal.pone.0051070 osteogenic tissue VSAO:curator mineralized bone tissue XAO:0004040 bone MESH:A02.835.232 portion of bone tissue FMA:224804 An epithelium that is part of a iris [Automatically generated definition]. EMAPA:35447 FMA:58517 MA:0002826 epithelial tissue of iris epithelium of iris epithelium pigmentosum (iris) iris epithelial tissue iris epithelium pigmented epithelium of iris uberon iris pigmented epithelium UBERON:0002506 iris epithelium UBERON:0002506 An epithelium that is part of a iris [Automatically generated definition]. OBOL:automatic epithelial tissue of iris OBOL:automatic epithelium of iris OBOL:automatic epithelium pigmentosum (iris) FMA:58517 iris epithelial tissue OBOL:automatic iris epithelium FMA:58517 pigmented epithelium of iris FMA:58517 iris pigmented epithelium MA:0002826 Replacement bone that forms within cartilage. AAO:0010776 AEO:0000083 BTO:0002157 EHDAA2:0003083 FMA:24321 TAO:0001591 VSAO:0000145 XAO:0004018 ZFA:0001591 ossified chondrogenic bone uberon cartilaginous bone UBERON:0002513 endochondral bone UBERON:0002513 Replacement bone that forms within cartilage. GO:0001958 GO_REF:0000034 VSAO:0000145 http://dx.plos.org/10.1371/journal.pone.0051070 https://github.com/obophenotype/uberon/issues/54 ossified chondrogenic bone VSAO:0000145 cartilaginous bone BTO:0002157 Bone tissue forms directly within mesenchyme, and does not replace other tissues[TAO]. Intramembranous ossification is the formation of bone in which osteoblasts secrete a collagen-proteoglycan matrix that binds calcium salts and becomes calcified[GO]. Intramembranous ossification is the way flat bones and the shell of a turtle are formed[GO]. Unlike endochondral ossification, cartilage is not present during intramembranous ossification[WP]. EMAPA:36615 TAO:0001644 Wikipedia:Intramembranous_ossification ZFA:0001635 uberon membrane bone UBERON:0002514 intramembranous bone UBERON:0002514 Bone tissue forms directly within mesenchyme, and does not replace other tissues[TAO]. Intramembranous ossification is the formation of bone in which osteoblasts secrete a collagen-proteoglycan matrix that binds calcium salts and becomes calcified[GO]. Intramembranous ossification is the way flat bones and the shell of a turtle are formed[GO]. Unlike endochondral ossification, cartilage is not present during intramembranous ossification[WP]. GO:0001957 Wikipedia:Intramembranous_ossification https://github.com/obophenotype/uberon/issues/267 membrane bone AEO:0000085 Connective tissue composed of elastic fibers. FMA:20113 GAID:926 MA:0002853 MESH:D004547 NCIT:C32495 SCTID:27197004 Wikipedia:Elastic_fiber elastic connective tissue elastic fiber uberon UBERON:0002521 elastic tissue UBERON:0002521 Connective tissue composed of elastic fibers. http://orcid.org/0000-0002-6601-2165 The middle layer of an artery or vein. [WP,unvetted]. BTO:0002011 EMAPA:36298 FMA:55590 GAID:170 MA:0002855 MESH:D017540 NCIT:C33821 SCTID:61695000 Wikipedia:Tunica_media uberon UBERON:0002522 May be composed of smooth muscle and elastic tissue tunica media UBERON:0002522 The middle layer of an artery or vein. [WP,unvetted]. Wikipedia:Tunica_media The innermost layer of a blood vessel which is a lining of endothelial cells facing the lumen[Kardong]. BTO:0002012 EMAPA:36297 FMA:55589 GAID:523 MA:0002861 MESH:D017539 NCIT:C33820 SCTID:8361002 SCTID:87483006 Wikipedia:Tunica_intima uberon Bichat's tunic intima tunica intima vasorum UBERON:0002523 tunica intima UBERON:0002523 The innermost layer of a blood vessel which is a lining of endothelial cells facing the lumen[Kardong]. ISBN:0073040584 NCIT:C33820 Wikipedia:Tunica_intima Bichat's tunic BTO:0002012 intima BTO:0002012 tunica intima vasorum BTO:0002012 An organ that functions as a secretory or excretory organ. AAO:0000212 AEO:0000096 BTO:0000522 EFO:0000797 EHDAA2:0003096 EHDAA:2161 EMAPA:18425 FMA:7146 FMA:86294 HAO:0000375 MA:0003038 MAT:0000021 MIAA:0000021 NCIT:C13319 SCTID:134358001 Wikipedia:Gland WikipediaCategory:Glands galen:Gland glandular organ uberon Druese UBERON:0002530 gland UBERON:0002530 An organ that functions as a secretory or excretory organ. MGI:csmith MP:0002163 glandular organ http://orcid.org/0000-0002-6601-2165 Druese BTO:0000522 In amniote animal embryology, the epiblast is a tissue type derived either from the inner cell mass in mammals or the blastodisc in birds and reptiles. It lies above the hypoblast. In mammalian embryogenesis, the columnar cells of the epiblast are adjacent to the trophoblast, while the cuboidal cells of the hypoblast are closer to the blastocoele. The epiblast, whilst referred to as the primary ectoderm, differentiates to form all three layers of the trilaminar germ disc in a process called gastrulation[WP]. The outer of the two layers of the blastoderm that form during gastrulation, corresponding to primitive ectoderm during gastrulation and to the definitive ectoderm after gastrulation[ZFA]. BTO:0004593 FMA:296704 MAT:0000067 MIAA:0000067 VHOG:0000243 Wikipedia:Epiblast epiblast uberon blastocyst ectoblast primitive ectoderm UBERON:0002532 epiblast (generic) UBERON:0002532 In amniote animal embryology, the epiblast is a tissue type derived either from the inner cell mass in mammals or the blastodisc in birds and reptiles. It lies above the hypoblast. In mammalian embryogenesis, the columnar cells of the epiblast are adjacent to the trophoblast, while the cuboidal cells of the hypoblast are closer to the blastocoele. The epiblast, whilst referred to as the primary ectoderm, differentiates to form all three layers of the trilaminar germ disc in a process called gastrulation[WP]. The outer of the two layers of the blastoderm that form during gastrulation, corresponding to primitive ectoderm during gastrulation and to the definitive ectoderm after gastrulation[ZFA]. Wikipedia:Epiblast ZFIN:curator epiblast VHOG:0000243 ectoblast MP:0003886 primitive ectoderm VHOG:0000243 Sense organ embedded in the integument and consisting of one or a cluster of sensory neurons and associated sensory structures, support cells and glial cells forming a single organised unit with a largely bona-fide boundary.[FBbt]. BTO:0001237 EFO:0000939 HAO:0000933 MAT:0000163 MIAA:0000163 TGMA:0000540 Wikipedia:Sensillum sensillum uberon UBERON:0002536 arthropod sensillum UBERON:0002536 Sense organ embedded in the integument and consisting of one or a cluster of sensory neurons and associated sensory structures, support cells and glial cells forming a single organised unit with a largely bona-fide boundary.[FBbt]. FBbt:00007152 Wikipedia:Sensillum sensillum FBbt:00007152 HAO:0000933 One of a series of paired bulges that develop along the lateral walls of the foregut. The pharyngeal arches have developmental contributions from endoderm, mesoderm, and neural crest cells and are separated by anterior lateral endoderm out-pockets known as pharyngeal pouches. AAO:0010359 BTO:0001785 EFO:0000959 EHDAA:571 EMAPA:16117 FMA:293015 GAID:1292 MAT:0000242 MESH:D001934 MIAA:0000242 NCIT:C34249 SCTID:308766004 TAO:0001306 VHOG:0000155 Wikipedia:Pharyngeal_arch XAO:0000096 ZFA:0001306 branchial arch uberon visceral arch UBERON:0002539 pharyngeal arch UBERON:0002539 One of a series of paired bulges that develop along the lateral walls of the foregut. The pharyngeal arches have developmental contributions from endoderm, mesoderm, and neural crest cells and are separated by anterior lateral endoderm out-pockets known as pharyngeal pouches. PMID:16313389 ZFA:yb http://orcid.org/0000-0002-6601-2165 branchial arch BTO:0001785 MP:0002884 Ectodermal placode that develops in the head into a part of the sensory nervous system. With a few exceptions (lens, adenohypophyseal), cranial placodes are neurogenic. placode AAO:0010466 EFO:0001650 MAT:0000369 MIAA:0000369 XAO:0000305 ectodermal cranial placode uberon UBERON:0002546 cranial placode UBERON:0002546 Ectodermal placode that develops in the head into a part of the sensory nervous system. With a few exceptions (lens, adenohypophyseal), cranial placodes are neurogenic. http://www.ncbi.nlm.nih.gov/books/NBK53175/ https://github.com/obophenotype/uberon/issues/135 https://github.com/seger/aao/issues/4 https://orcid.org/0000-0002-6601-2165 https://sourceforge.net/p/obo/xenopus-anatomy-xao-term-requests/11/ placode Wikipedia:Placode ectodermal cranial placode UBERON:cjm Anatomical space which contains portions of one or more body substances and is bounded by the internal surface of one maximally connected anatomical structure. Examples: cranial cavity, pharyngeal recess space, nasal cavity, tooth socket, cavity of serous sac, lumen of stomach, lumen of artery, fornix of vagina. cavity BIRNLEX:1011 FMA:67552 MA:0002447 NCIT:C34007 galen:Cavity uberon UBERON:0002553 anatomical cavity UBERON:0002553 Anatomical space which contains portions of one or more body substances and is bounded by the internal surface of one maximally connected anatomical structure. Examples: cranial cavity, pharyngeal recess space, nasal cavity, tooth socket, cavity of serous sac, lumen of stomach, lumen of artery, fornix of vagina. FMA:67552 BIRNLEX:1019 FMA:12237 SCTID:362606005 cavity of organ uberon UBERON:0002558 organ cavity UBERON:0002558 cavity of organ FMA:12237 The cavity that is enclosed by the central nervous system. In vertebrates this is the cavity that includes as parts ventricular cavities and the central canal of the spinal cord that develops from the lumen of the neura tube. BIRNLEX:1029 FMA:75007 cavity of neuraxis cavity of ventricular system of neuraxis neuraxis cavity neuraxis lumen uberon UBERON:0002561 lumen of central nervous system UBERON:0002561 The cavity that is enclosed by the central nervous system. In vertebrates this is the cavity that includes as parts ventricular cavities and the central canal of the spinal cord that develops from the lumen of the neura tube. https://orcid.org/0000-0002-6601-2165 cavity of neuraxis FMA:75007 cavity of ventricular system of neuraxis FMA:75007 neuraxis cavity FMA:75007 Anatomical divisons of the brain according to one or more criteria, e.g. cytoarchitectural, gross anatomy. Parts may be contiguous in 3D or not, e.g., basal ganglia. BIRNLEX:1167 FMA:55676 NCIT:C13031 SCTID:384763002 anatomical structure of brain biological structure of brain brain anatomical structure brain biological structure brain part neuraxis segment neuroanatomical region segment of brain uberon UBERON:0002616 regional part of brain UBERON:0002616 Anatomical divisons of the brain according to one or more criteria, e.g. cytoarchitectural, gross anatomy. Parts may be contiguous in 3D or not, e.g., basal ganglia. BIRNLEX:1167 anatomical structure of brain OBOL:automatic biological structure of brain OBOL:automatic brain anatomical structure OBOL:automatic brain biological structure OBOL:automatic neuraxis segment FMA:55676 segment of brain BIRNLEX:1167 A spinal cord segment that adjacent_to a cervical region. BIRNLEX:1499 FMA:71166 MA:0003081 NCIT:C12892 SCTID:180960003 neuronames:1654 cervical segment of spinal cord cervical segments of spinal cord [1-8] cervical spinal cord uberon UBERON:0002726 cervical spinal cord UBERON:0002726 A spinal cord segment that adjacent_to a cervical region. OBOL:automatic cervical segment of spinal cord FMA:71166 cervical segments of spinal cord [1-8] FMA:71166 cervical spinal cord FMA:71166 A cerebral hemisphere that is in the left side of a brain. BIRNLEX:1795 FMA:61819 NCIT:C32955 SCTID:362323007 left hemisphere uberon UBERON:0002812 left cerebral hemisphere UBERON:0002812 A cerebral hemisphere that is in the left side of a brain. OBOL:automatic left hemisphere BIRNLEX:1795 A cerebral hemisphere that is in the right side of a brain. BIRNLEX:1797 FMA:67292 NCIT:C33472 SCTID:362322002 right hemisphere uberon UBERON:0002813 right cerebral hemisphere UBERON:0002813 A cerebral hemisphere that is in the right side of a brain. OBOL:automatic right hemisphere BIRNLEX:1797 Nucleus forming a longitudinal cell column in the medulla, close beneath the floor of the 4th ventricle, containing motor neurons that innervate the muscles of the tongue (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 453). BAMS:12 BAMS:12N BAMS:XII BIRNLEX:2644 BM:XII DHBA:12545 EHDAA2:0004635 EMAPA:35416 EV:0100286 FMA:54505 HBA:9557 MA:0001039 MBA:773 NCIT:C12899 SCTID:47361005 VHOG:0001358 Wikipedia:Hypoglossal_nucleus ncithesaurus:Nucleus_of_the_Hypoglossal_Nerve hypoglossal XII nucleus hypoglossal nerve nucleus hypoglossal nucleus nucleus of hypoglossal nerve twelfth cranial nerve nucleus uberon UBERON:0002871 hypoglossal nucleus UBERON:0002871 Nucleus forming a longitudinal cell column in the medulla, close beneath the floor of the 4th ventricle, containing motor neurons that innervate the muscles of the tongue (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 453). BIRNLEX:2644 hypoglossal XII nucleus MA:0001039 hypoglossal nerve nucleus FMA:54505 hypoglossal nucleus FMA:54505 nucleus of hypoglossal nerve FMA:54505 twelfth cranial nerve nucleus FMA:54505 A nucleus of brain that is part of a trigeminal nuclear complex. BM:V BTO:0001074 CALOHA:TS-2077 EMAPA:35883 EV:0100271 FMA:71247 GAID:604 MA:0001028 MESH:D014278 NCIT:C12807 SCTID:280164007 VHOG:0001353 http://uri.neuinfo.org/nif/nifstd/nifext_11 nucleus of trigeminal nuclear complex trigeminal V nucleus trigeminal nuclear complex nucleus trigeminal nucleus uberon nucleus mesencephalicus nervi trigemini nucleus mesencephalicus trigeminalis nucleus tractus mesencephali nervi trigeminalis UBERON:0002925 trigeminal nucleus UBERON:0002925 A nucleus of brain that is part of a trigeminal nuclear complex. OBOL:automatic nucleus of trigeminal nuclear complex FMA:71247 trigeminal V nucleus MA:0001028 trigeminal nuclear complex nucleus FMA:71247 trigeminal nucleus FMA:71248 nucleus mesencephalicus nervi trigemini BTO:0001074 nucleus mesencephalicus trigeminalis BTO:0001074 nucleus tractus mesencephali nervi trigeminalis BTO:0001074 A sensory epithelium that is part of a gustatory system. FMA:62412 http://uri.neuinfo.org/nif/nifstd/nifext_12 uberon UBERON:0002926 gustatory epithelium UBERON:0002926 A sensory epithelium that is part of a gustatory system. OBOL:automatic Dorsal portion of the pons, containing cranial nervee nuclei, ascending and descending tracts and reticular nuclei. It is continuous with the reticular formation of the medulla (Carpenter, A Core Text of Neuroanatomy, 3rd ed, 1985, pg 133). BAMS:PTg BIRNLEX:923 DHBA:12416 FMA:71108 HBA:9135 SCTID:362401009 Wikipedia:Pontine_tegmentum dorsal pons dorsal portion of pons tegmental portion of pons tegmentum of pons uberon UBERON:0003023 pontine tegmentum UBERON:0003023 Dorsal portion of the pons, containing cranial nervee nuclei, ascending and descending tracts and reticular nuclei. It is continuous with the reticular formation of the medulla (Carpenter, A Core Text of Neuroanatomy, 3rd ed, 1985, pg 133). BIRNLEX:923 dorsal portion of pons FMA:71108 tegmental portion of pons FMA:71108 tegmentum of pons FMA:71108 A wall, dividing a cavity or structure into smaller ones[WP]. AAO:0011127 FMA:86461 Wikipedia:Septum uberon UBERON:0003037 general anatomical term in FMA septum UBERON:0003037 A wall, dividing a cavity or structure into smaller ones[WP]. Wikipedia:Septum The thoracic nerves are the spinal nerves emerging from the thoracic vertebrae. [WP,unvetted]. BIRNLEX:966 FMA:71167 MA:0003082 NCIT:C12894 SCTID:278750009 Wikipedia:Thoracic_spinal_cord neuronames:1718 thoracic region of spinal cord thoracic segment of spinal cord thoracic segments of spinal cord [1-12] thoracic spinal cord uberon UBERON:0003038 thoracic spinal cord UBERON:0003038 The thoracic nerves are the spinal nerves emerging from the thoracic vertebrae. [WP,unvetted]. Wikipedia:Thoracic_spinal_cord thoracic region of spinal cord FMA:71167 thoracic segment of spinal cord FMA:71167 thoracic segments of spinal cord [1-12] FMA:71167 thoracic spinal cord FMA:71167 A nerve fiber that is part of a trigeminal nerve. BAMS:5nf BIRNLEX:974 FMA:72501 central part of trigeminal nerve trigeminal nerve fibers trigeminal nerve tract uberon UBERON:0003041 trigeminal nerve fibers UBERON:0003041 A nerve fiber that is part of a trigeminal nerve. OBOL:automatic central part of trigeminal nerve FMA:72501 trigeminal nerve fibers FMA:72501 trigeminal nerve tract FMA:72501 The part of the brain that is the morphological boundary between the midbrain and hindbrain and that is the location of an organizing center which patterns the midbrain and hindbrain primordia of the neural plate. AAO:0011064 DMBA:16810 EHDAA2:0004395 EHDAA:5789 EMAPA:32857 NCIT:C93172 TAO:0000042 VHOG:0000649 XAO:0000016 ZFA:0000042 neuronames:2076 MHB mid-hindbrain boundary mid-hindbrain junction midbrain hindbrain boundary uberon isthmic organizer territory isthmo-cerebellar region isthmus isthmus/MHB UBERON:0003052 midbrain-hindbrain boundary UBERON:0003052 The part of the brain that is the morphological boundary between the midbrain and hindbrain and that is the location of an organizing center which patterns the midbrain and hindbrain primordia of the neural plate. GO:0021555 isthmic organizer territory XAO:0000016 isthmo-cerebellar region VHOG:0000649 isthmus/MHB Geisha:syn NCBITaxon:8782 The outermost layer (or layers, depending on the species) of embryonic skin, essential for the development of the epidermis and establishment of the barrier functions. The periderm derives from the outer layer of the ectoderm. EHDAA2:0001846 EHDAA:6538 FMA:295662 NCIT:C34247 TAO:0001185 VHOG:0001680 XAO:0000029 ZFA:0001185 uberon enveloping layer epitrichium UBERON:0003055 periderm UBERON:0003055 The outermost layer (or layers, depending on the species) of embryonic skin, essential for the development of the epidermis and establishment of the barrier functions. The periderm derives from the outer layer of the ectoderm. ISBN:9780878932504 PMID:25133425 PMID:35582825 enveloping layer ZFA:0001185 epitrichium MP:0013530 PMID:28722897 The portion of neural plate anterior to the mid-hindbrain junction. AAO:0011084 TAO:0007016 VHOG:0001200 XAO:0000045 ZFA:0007016 uberon anterior neural plate UBERON:0003056 pre-chordal neural plate UBERON:0003056 The portion of neural plate anterior to the mid-hindbrain junction. XB:curator The portion of neural plate posterior to the mid-hindbrain junction. TAO:0007017 VHOG:0001201 XAO:0000046 ZFA:0007017 uberon posterior neural plate UBERON:0003057 chordal neural plate UBERON:0003057 The portion of neural plate posterior to the mid-hindbrain junction. XB:curator Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. AAO:0011086 EFO:0001982 EMAPA:16189 EMAPA:16752 TAO:0000279 VHOG:0000559 XAO:0000057 ZFA:0000279 segmental plate unsegmented paraxial mesoderm uberon PSM presumptive somite mesoderm somitogenic mesoderm somitomeric mesoderm unsegmented mesenchyme UBERON:0003059 presomitic mesoderm UBERON:0003059 Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. ZFIN:curator unsegmented paraxial mesoderm https://orcid.org/0000-0002-6601-2165 somitomeric mesoderm GO:0002075 unsegmented mesenchyme VHOG:0000559 Blood islands are structures in the developing embryo which lead to many different parts of the circulatory system. They primarily derive from plexuses formed from angioblasts. Within them, vacuoles appear through liquefaction of the central part of the syncytium into plasma. The lumen of the blood vessels thus formed is probably intracellular. The flattened cells at the periphery form the endothelium. The nucleated red blood corpuscles develop either from small masses of the original angioblast left attached to the inner wall of the lumen or directly from the flat endothelial cells. In either case the syncytial mass thus formed projects from and is attached to the wall of the vessel. Such a mass is known as a blood island and hemoglobin gradually accumulates within it. Later the cells on the surface round up, giving the mass a mulberry-like appearance. Then the red blood cells break loose and are carried away in the plasma. Such free blood cells continue to divide. Blood islands have been seen in the area vasculosa in the omphalomesenteric vein and arteries, and in the dorsal aorta[WP, unvetted]. ventral lateral plate mesoderm AAO:0011006 EFO:0003489 EHDAA:207 NCIT:C34113 TAO:0000094 TE:E5.11.2.0.0.0.4 VHOG:0000085 Wikipedia:Blood_island_of_umbilical_vesicle XAO:0000067 ZFA:0000094 uberon VBI caudal hematopoietic tissue posterior ICM posterior blood island ventral blood island UBERON:0003061 blood island UBERON:0003061 Blood islands are structures in the developing embryo which lead to many different parts of the circulatory system. They primarily derive from plexuses formed from angioblasts. Within them, vacuoles appear through liquefaction of the central part of the syncytium into plasma. The lumen of the blood vessels thus formed is probably intracellular. The flattened cells at the periphery form the endothelium. The nucleated red blood corpuscles develop either from small masses of the original angioblast left attached to the inner wall of the lumen or directly from the flat endothelial cells. In either case the syncytial mass thus formed projects from and is attached to the wall of the vessel. Such a mass is known as a blood island and hemoglobin gradually accumulates within it. Later the cells on the surface round up, giving the mass a mulberry-like appearance. Then the red blood cells break loose and are carried away in the plasma. Such free blood cells continue to divide. Blood islands have been seen in the area vasculosa in the omphalomesenteric vein and arteries, and in the dorsal aorta[WP, unvetted]. Wikipedia:Blood_island_of_umbilical_vesicle A horseshoe-shaped thickening of the endoderm at the cranial (rostral) end of the primitive streak formed by the involution of Spemann's organizer cells which, together with the notochord, induces the formation of the neural plate from the overlying ectodermal cells and contributes mesodermal type cells to the surrounding tissue. UBERON:0004881 head mesenchyme head mesoderm AAO:0011085 EHDAA2:0001493 EHDAA:181 FMA:295532 TAO:0000060 VHOG:0000086 Wikipedia:Prechordal_plate XAO:0000079 ZFA:0000060 uberon UBERON:0003063 prechordal plate UBERON:0003063 A horseshoe-shaped thickening of the endoderm at the cranial (rostral) end of the primitive streak formed by the involution of Spemann's organizer cells which, together with the notochord, induces the formation of the neural plate from the overlying ectodermal cells and contributes mesodermal type cells to the surrounding tissue. ISBN:0838580343 MP:0004387 head mesenchyme XAO:0000079 head mesoderm XAO:0000079 The intermediate mesoderm is located between the lateral mesoderm and the paraxial mesoderm. It develops into the kidney and gonads. AAO:0010575 EMAPA:16056 EMAPA:16178 FMA:293147 NCIT:C34193 SCTID:361476001 TAO:0001206 VHOG:0000087 Wikipedia:Intermediate_mesoderm XAO:0000085 ZFA:0001206 uberon IM intermediate mesenchyme intermediate plate intermediate plate mesoderm UBERON:0003064 intermediate mesoderm UBERON:0003064 The intermediate mesoderm is located between the lateral mesoderm and the paraxial mesoderm. It develops into the kidney and gonads. GOC:curators Wikipedia:Intermediate_mesoderm intermediate mesenchyme https://github.com/obophenotype/uberon/wiki/The-neural-crest intermediate plate EMAPA:16178 intermediate plate mesoderm https://orcid.org/0000-0002-6601-2165 The second pharyngeal arch will form the hyoid apparatus. The cranial neural crest cells that populate the second pharyngeal arch emerge primarily from rhombomere 4 and will form skeletal elements. AAO:0010363 EHDAA2:0000050 EHDAA:611 EMAPA:16272 FMA:293017 NCIT:C34288 SCTID:308768003 TAO:0001596 VHOG:0000297 Wikipedia:Second_pharyngeal_arch XAO:0000098 ZFA:0001611 2nd pharyngeal arch hyoid arch pharyngeal arch 2 second pharyngeal arch uberon 2nd arch 2nd visceral arch hyoid bars pharyngeal arches 2 UBERON:0003066 pharyngeal arch 2 UBERON:0003066 The second pharyngeal arch will form the hyoid apparatus. The cranial neural crest cells that populate the second pharyngeal arch emerge primarily from rhombomere 4 and will form skeletal elements. PMID:12784288 ZFIN:yb https://github.com/obophenotype/uberon/issues/258 hyoid arch XAO:0000098 2nd arch EHDAA2:0000050 2nd visceral arch VHOG:0000297 pharyngeal arches 2 VHOG:0000297 Lateral neurogenic placodes positioned dorsal of the epibranchial placodes. TAO:0001310 VHOG:0000103 XAO:0000187 ZFA:0001310 uberon UBERON:0003067 The only remaining dorsolateral placode in land vertebrates is the otic/octaval placode dorsolateral placode UBERON:0003067 Lateral neurogenic placodes positioned dorsal of the epibranchial placodes. ZFIN:curator The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord. AAO:0011017 EFO:0003647 TAO:0001204 VHOG:0000107 Wikipedia:Chordamesoderm XAO:0000205 ZFA:0001204 uberon chordamesoderm UBERON:0003068 axial mesoderm UBERON:0003068 The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord. GO:0048318 Wikipedia:Chordamesoderm chordamesoderm Wikipedia:Chordamesoderm A neurogenic placode that arises at the level of the midbrain-hindbrain boundary and develops into a trigeminal ganglion. EFO:0003433 EHDAA2:0004209 TAO:0000162 VHOG:0000109 XAO:0000225 ZFA:0000162 trigeminal V placode trigeminal placode uberon UBERON:0003070 trigeminal placode complex UBERON:0003070 A neurogenic placode that arises at the level of the midbrain-hindbrain boundary and develops into a trigeminal ganglion. PMID:22512454 http://orcid.org/0000-0002-6601-2165 https://github.com/obophenotype/uberon/issues/693 trigeminal placode EHDAA2:0004209 VHOG:0000109 XAO:0000225 ZFA:0000162 Portion of tissue that is part of the anterior neural keel and will form the optic vesicle[ZFA]. A paired ectodermal placode that becomes invaginated to form the embryonic lens vesicles. UBERON:0005060 AAO:0011038 EFO:0003541 EHDAA2:0004431 TAO:0000570 XAO:0000227 XAO:0004090 ZFA:0000570 eye placode occular primordium ocular primordium optic placode optic placode of camera-type eye optic primordium uberon eye anlage eye field optic field UBERON:0003071 eye primordium UBERON:0003071 Portion of tissue that is part of the anterior neural keel and will form the optic vesicle[ZFA]. A paired ectodermal placode that becomes invaginated to form the embryonic lens vesicles. GO:0046619 ZFA:0000570 eye placode OBOL:automatic optic placode GO:0046619 optic placode of camera-type eye GO:0046619 https://orcid.org/0000-0002-6601-2165 eye anlage XAO:0000227 Multi-tissue structure that is comprised of neural and non-neural epithelial layers which will form the retina and retinal pigmented epithelium of the mature eye[ZFA]. double walled structured formed by expansion and invagination of the distal end of the optic vesicle that develops into the pigmented and sensory layers of the retina while the mouth of the optic cup eventually forms the pupil of the eye[MP]. BTO:0005351 EHDAA2:0001303 EHDAA:2912 EMAPA:16674 NCIT:C34233 SCTID:308789007 TAO:0001202 VHOG:0000167 ZFA:0001202 uberon eye cup eyecup ocular cup ophtalmic cup UBERON:0003072 optic cup UBERON:0003072 Multi-tissue structure that is comprised of neural and non-neural epithelial layers which will form the retina and retinal pigmented epithelium of the mature eye[ZFA]. double walled structured formed by expansion and invagination of the distal end of the optic vesicle that develops into the pigmented and sensory layers of the retina while the mouth of the optic cup eventually forms the pupil of the eye[MP]. MP:0004269 Wikipedia:Optic_cup_(embryology) ZFA:0001202 eyecup BTO:0005351 ocular cup VHOG:0000167 ophtalmic cup BTO:0005351 A thickened portion of ectoderm which serves as the precursor to the lens. SOX2 and Pou2f1 are involved in its development[WP]. AAO:0011055 EFO:0003494 EHDAA2:0000982 EHDAA:2908 EMAPA:16672 FMA:296767 NCIT:C34202 TAO:0000122 VHOG:0000166 Wikipedia:Lens_placode XAO:0000240 ZFA:0000122 uberon UBERON:0003073 lens placode UBERON:0003073 A thickened portion of ectoderm which serves as the precursor to the lens. SOX2 and Pou2f1 are involved in its development[WP]. Wikipedia:Lens_placode ZFIN:curator A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA]. AAO:0011072 BTO:0001765 DHBA:10153 DMBA:15565 EHDAA:346 EHDAA:902 EMAPA:35593 FMA:293879 NCIT:C34225 RETIRED_EHDAA2:0001252 TAO:0000132 VHOG:0000068 Wikipedia:Neural_plate XAO:0000249 ZFA:0000132 neuronames:1362 uberon presumptive central nervous system UBERON:0003075 neural plate UBERON:0003075 A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA]. ISBN:0815318960 OMD:neural+plate Wikipedia:Neural_plate ZFIN:curator AAO:0011082 TAO:0007037 VHOG:0001383 XAO:0000250 ZFA:0007037 uberon UBERON:0003076 posterior neural tube UBERON:0003076 The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube[GO]. AAO:0010568 EFO:0003515 EMAPA:16183 EMAPA:16751 FMA:293145 NCIT:C34244 SCTID:361475002 TAO:0000255 VHOG:0000114 Wikipedia:Paraxial_mesoderm XAO:0000259 ZFA:0000255 paraxial mesenchyme somitic mesoderm uberon UBERON:0003077 paraxial mesoderm UBERON:0003077 The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube[GO]. GO:0048339 https://github.com/obophenotype/uberon/issues/30 paraxial mesenchyme ZFA:0000255 https://github.com/obophenotype/uberon/issues/30 https://github.com/obophenotype/uberon/wiki/The-neural-crest somitic mesoderm ISBN:9780878932504 Focal thickenings of the embryonic ectoderm that form immediately dorsal and caudal of the clefts between the pharyngeal arches and that produce the neuroblasts that migrate and condense to form the distal cranial ganglia. AAO:0011036 EFO:0003455 FMA:293968 TAO:0001294 VHOG:0000117 XAO:0000284 ZFA:0001294 uberon ventrolateral placode UBERON:0003078 epibranchial placode UBERON:0003078 Focal thickenings of the embryonic ectoderm that form immediately dorsal and caudal of the clefts between the pharyngeal arches and that produce the neuroblasts that migrate and condense to form the distal cranial ganglia. VHOG:0000117 ventrolateral placode ISBN:0471888893 AAO:0011012 TAO:0007038 VHOG:0001384 XAO:0000307 ZFA:0007038 uberon UBERON:0003080 anterior neural tube UBERON:0003080 Portion of the middle of the three primary germ layers of the embryo that resides on the periphery of the embryo, is continuous with the extra-embryonic mesoderm, splits into two layers enclosing the intra-embryonic coelom, and gives rise to body wall structures[MP]. UBERON:0006258 AAO:0010574 EHDAA2:0000919 EHDAA:379 EMAPA:16179 FMA:293149 NCIT:C34199 SCTID:361477005 TAO:0000121 VHOG:0000118 Wikipedia:Lateral_plate_mesoderm XAO:0000311 ZFA:0000121 lateral mesoderm uberon lateral plate lateral plate mesenchyme UBERON:0003081 lateral plate mesoderm UBERON:0003081 Portion of the middle of the three primary germ layers of the embryo that resides on the periphery of the embryo, is continuous with the extra-embryonic mesoderm, splits into two layers enclosing the intra-embryonic coelom, and gives rise to body wall structures[MP]. MP:0010117 Wikipedia:Lateral_plate_mesoderm lateral mesoderm GO:0048368 lateral plate mesenchyme EHDAA2:0000919 A transitional population of migrating mesenchymal cells that derive from somites and that will become muscle cells. AAO:0011067 AEO:0001018 BTO:0000742 EHDAA2_RETIRED:0003431 EHDAA:1721 EHDAA:1727 EHDAA:1733 EHDAA:1739 EMAPA:32841 FMA:295658 NCIT:C34214 SCTID:344535001 TAO:0001056 VHOG:0001244 Wikipedia:Myotome XAO:0000315 ZFA:0001056 uberon muscle plate myomere myotome region myotomes UBERON:0003082 myotome UBERON:0003082 A transitional population of migrating mesenchymal cells that derive from somites and that will become muscle cells. AEO:0001018 Trunk portion of the neural crest. The trunk neural crest lies between the vagal and sacral neural crest and gives rise to two groups of cells. One group migrates dorsolateral and populates the skin, forming pigment cells and the other migrates ventrolateral through the anterior sclerotome to become the epinephrine-producing cells of the adrenal gland and the neurons of the sympathetic nervous system. Some cells remain in the sclerotome to form the dorsal root ganglia [Wikipedia]. AAO:0010582 EFO:0003605 EHDAA2:0001901 TAO:0001024 VHOG:0000062 Wikipedia:Trunk_neural_crest XAO:0000319 ZFA:0001024 uberon trunk crest UBERON:0003083 trunk neural crest UBERON:0003083 Trunk portion of the neural crest. The trunk neural crest lies between the vagal and sacral neural crest and gives rise to two groups of cells. One group migrates dorsolateral and populates the skin, forming pigment cells and the other migrates ventrolateral through the anterior sclerotome to become the epinephrine-producing cells of the adrenal gland and the neurons of the sympathetic nervous system. Some cells remain in the sclerotome to form the dorsal root ganglia [Wikipedia]. ISBN:0815318960 Wikipedia:Trunk_neural_crest Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline to form the heart rudiment or cone. AAO:0011044 BTO:0001887 NCIT:C34276 TAO:0000028 XAO:0000336 ZFA:0000028 uberon cardiac field fused heart primordium UBERON:0003084 heart primordium UBERON:0003084 Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline to form the heart rudiment or cone. ZFIN:curator cardiac field ZFA:0000028 Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]. AAO:0010571 AEO:0000212 EHDAA2:0003439 EMAPA:31159 FMA:295652 NCIT:C34287 TAO:0001080 VHOG:0000680 Wikipedia:Sclerotome XAO:0000397 ZFA:0001080 uberon UBERON:0003089 sclerotome UBERON:0003089 Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]. Wikipedia:Sclerotome XB:curator https://github.com/obophenotype/uberon/issues/316 Neural crest cells (NCCs) originating in the anterior part of the developing embryo and residing between the mid-diencephalon and the forming hindbrain; cranial NCCs migrate dorsolaterally to form the craniofacial mesenchyme that differentiates into various craniofacial cartilages and bones, cranial neurons, glia, and connective tissues of the face; these cells enter the pharyngeal pouches and arches where they give rise to thymic cells, bones of the middle ear and jaw (mandible), and the odontoblasts of the tooth primordia; like their counterparts in the trunk, cranial NCCs also contribute to the developing peripheral nervous system, along with the pigmented cell (i.e. melanocyte) lineage. AAO:0010580 EFO:0003645 EHDAA2:0004420 EMAPA:16091 TAO:0001194 VHOG:0000063 Wikipedia:Cranial_neural_crest XAO:0001001 ZFA:0001194 cephalic neural crest cranial NCC population head NCC population uberon head crest head neural crest UBERON:0003099 cranial neural crest UBERON:0003099 Neural crest cells (NCCs) originating in the anterior part of the developing embryo and residing between the mid-diencephalon and the forming hindbrain; cranial NCCs migrate dorsolaterally to form the craniofacial mesenchyme that differentiates into various craniofacial cartilages and bones, cranial neurons, glia, and connective tissues of the face; these cells enter the pharyngeal pouches and arches where they give rise to thymic cells, bones of the middle ear and jaw (mandible), and the odontoblasts of the tooth primordia; like their counterparts in the trunk, cranial NCCs also contribute to the developing peripheral nervous system, along with the pigmented cell (i.e. melanocyte) lineage. MGI:anna cephalic neural crest EMAPA:16091 Gonochoristic organism that can produce female gametes. AAO:0010030 BILA:0000028 CARO:0000028 FMA:67812 HAO:0000028 SCTID:362608006 TAO:0000303 TGMA:0001839 XAO:0003005 ZFA:0000303 uberon female UBERON:0003100 female organism UBERON:0003100 Gonochoristic organism that can produce female gametes. CARO:0000028 female TAO:0000303 Anatomical structure that overlaps the outer epithelial layer and is adjacent to the space surrounding the organism. AAO:0010337 AEO_RETIRED:0000010 EHDAA2_RETIRED:0003010 TAO:0000292 VSAO:0000001 Wikipedia:Surface_structure XAO:0003028 ZFA:0000292 galen:SurfaceRegion anatomical surface feature uberon surface feature surface region UBERON:0003102 surface structure UBERON:0003102 Anatomical structure that overlaps the outer epithelial layer and is adjacent to the space surrounding the organism. http://orcid.org/0000-0002-6601-2165 https://github.com/obophenotype/uberon/issues/24 anatomical surface feature EHDAA2:0003010 Anatomical structure that has as its parts two or more multi-tissue structures of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona fide boundaries from other distinct anatomical structures of different types. AAO:0010015 AEO:0000024 BILA:0000024 CARO:0000024 EHDAA2:0003024 HAO:0000024 TADS:0000598 TAO:0000496 TGMA:0001837 VHOG:0001723 XAO:0003041 ZFA:0000496 uberon organ UBERON:0003103 compound organ UBERON:0003103 Anatomical structure that has as its parts two or more multi-tissue structures of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona fide boundaries from other distinct anatomical structures of different types. CARO:0000024 Portion of tissue composed of mesenchymal cells (motile cells that develop from epthelia via an epithelial to mesenchymal transition) and surrounding extracellular material. Mesenchyme has different embryological origins in different metazoan taxa - in many invertebrates it derives in whole or part from ectoderm. In vertebrates it derives largely from mesoderm, and sometimes the terms are used interchangeably, e.g. lateral plate mesoderm/mesenchyme. AAO:0010427 AEO:0000145 BTO:0001393 CALOHA:TS-0620 EHDAA2:0003145 EV:0100007 NCIT:C13301 TAO:0000393 VHOG:0000170 Wikipedia:Mesenchyme XAO:0003046 ZFA:0000393 mesenchymal tissue mesenchyme tissue portion of mesenchymal tissue portion of mesenchyme tissue uberon UBERON:0003104 mesenchyme UBERON:0003104 Portion of tissue composed of mesenchymal cells (motile cells that develop from epthelia via an epithelial to mesenchymal transition) and surrounding extracellular material. Mesenchyme has different embryological origins in different metazoan taxa - in many invertebrates it derives in whole or part from ectoderm. In vertebrates it derives largely from mesoderm, and sometimes the terms are used interchangeably, e.g. lateral plate mesoderm/mesenchyme. https://archive.org/details/invertebratesnde00brus/page/n240/mode/2up https://en.wikipedia.org/wiki/Mesenchyme https://github.com/obophenotype/uberon/issues/1641 Subdivision of skeleton that includes all dermal bones in the cranial skeleton[ZFA,modified]. AAO:0010154 TAO:0000863 VHOG:0001665 Wikipedia:Skull_roof XAO:0003169 ZFA:0000863 dendrocranium exocranium dermal skull roof dermatocranial cover roof of skull skull roof uberon dermal bone cranium dermal part of skull dermal skull bones roofing bones of the skull skull exoskeleton UBERON:0003113 dermatocranium UBERON:0003113 Subdivision of skeleton that includes all dermal bones in the cranial skeleton[ZFA,modified]. Wikipedia:Skull_roof ZFA:0000863 dendrocranium TAO:0000863 exocranium UBERONREF:0000007 dermal skull roof PMID:11523816 Wikipedia:Skull_roof roof of skull Wikipedia:Skull_roof skull roof PMID:11523816 Wikipedia:Skull_roof dermal bone cranium ZFA:0000863 roofing bones of the skull Wikipedia:Skull_roof The third branchial arch contributes to the development of the hyoid bone, stylopharyngeus muscle, inferior parathyroid gland, and thymus. AAO:0010365 EHDAA2:0000069 EHDAA:1080 EMAPA:16399 FMA:293029 SCTID:308769006 TAO:0001598 VHOG:0000298 XAO:0000447 ZFA:0001606 3rd pharyngeal arch third pharyngeal arch third visceral arch visceral arch 3 uberon 3rd arch 3rd visceral arch UBERON:0003114 pharyngeal arch 3 UBERON:0003114 The third branchial arch contributes to the development of the hyoid bone, stylopharyngeus muscle, inferior parathyroid gland, and thymus. MP:0006339 3rd arch EHDAA2:0000069 3rd visceral arch VHOG:0000298 Contributes to development of the cartilage of the larynx, laryngeal, pharyngeal, and soft palate muscles, superior parathyroid gland, and C-cells of the thymus. AAO:0010366 EHDAA2:0000086 EHDAA:1663 EMAPA:16760 FMA:293035 SCTID:308770007 TAO:0001599 VHOG:0000299 XAO:0000449 ZFA:0001607 4th pharyngeal arch 4th visceral arch fourth pharyngeal arch visceral arch 4 uberon 4th arch fourth visceral arch UBERON:0003115 pharyngeal arch 4 UBERON:0003115 Contributes to development of the cartilage of the larynx, laryngeal, pharyngeal, and soft palate muscles, superior parathyroid gland, and C-cells of the thymus. MP:0006340 4th arch EHDAA2:0000086 fourth visceral arch VHOG:0000299 The 6th pharyngeal arch. contributes to the development of the sternocleidomastoid and trapezius muscles. UBERON:0004349 AAO:0010368 EHDAA2:0004075 EMAPA:32766 FMA:293047 SCTID:308772004 TAO:0001601 VHOG:0001205 XAO:0000453 ZFA:0001609 6th arch gill arch 4 sixth branchial arch visceral arch 6 uberon 6th pharyngeal arch 6th visceral arch sixth pharyngeal arch sixth visceral arch UBERON:0003117 pharyngeal arch 6 UBERON:0003117 The 6th pharyngeal arch. contributes to the development of the sternocleidomastoid and trapezius muscles. MP:0006347 6th arch EHDAA2:0004075 gill arch 4 ZFA:0001609 visceral arch 6 ZFA:0001609 6th pharyngeal arch VHOG:0001205 6th visceral arch VHOG:0001205 sixth pharyngeal arch VHOG:0001205 sixth visceral arch XAO:0000453 The vessels formed within the first pair of branchial arches in embryogenesis. UBERON:0004371 AAO:0010415 EHDAA2:0000007 EMAPA:16202 EMAPA:16685 SCTID:308774003 TAO:0005005 VHOG:0000149 XAO:0000342 ZFA:0005005 1st arch artery AA1 aortic arch 1 first aortic arch first branchial arch artery mandibular aortic arch uberon 1st aortic arch artery 1st branchial arch artery 1st pharyngeal arch artery first arch artery UBERON:0003118 pharyngeal arch artery 1 UBERON:0003118 The vessels formed within the first pair of branchial arches in embryogenesis. MP:0010355 1st arch artery EMAPA:16685 AA1 ZFA:0005005 aortic arch 1 ZFA:0005005 first aortic arch XAO:0000342 mandibular aortic arch ZFA:0005005 1st aortic arch artery EMAPA:16685 1st branchial arch artery EMAPA:16685 1st pharyngeal arch artery EMAPA:16685 first arch artery EMAPA:16685 The vessels formed within the second pair of branchial arches in embryogenesis. UBERON:0004372 AAO:0010418 EHDAA2:0000051 EMAPA:16203 EMAPA:16686 SCTID:308775002 TAO:0005006 VHOG:0000148 Wikipedia:Aortic_arches#Arches_1_and_2 XAO:0000343 ZFA:0005006 2nd arch artery AA2 aortic arch 2 hyoid aortic arch second aortic arch second branchial arch artery uberon 2nd aortic arch artery 2nd branchial arch artery 2nd pharyngeal arch artery UBERON:0003119 pharyngeal arch artery 2 UBERON:0003119 The vessels formed within the second pair of branchial arches in embryogenesis. MP:0010356 2nd arch artery EHDAA2:0000051 AA2 ZFA:0005006 aortic arch 2 ZFA:0005006 hyoid aortic arch ZFA:0005006 second aortic arch XAO:0000343 2nd aortic arch artery EMAPA:16686 2nd branchial arch artery EMAPA:16686 2nd pharyngeal arch artery EMAPA:16686 The vessels formed within the third pair of branchial arches in embryogenesis. UBERON:0004352 AAO:0010419 EHDAA2:0000070 EMAPA:16687 SCTID:308776001 TAO:0005007 VHOG:0000147 Wikipedia:Aortic_arches#Arch_3 XAO:0000344 ZFA:0005007 3rd arch artery AA3 aortic arch 3 carotid arch third aortic arch third branchial arch artery uberon 3rd aortic arch artery 3rd branchial arch artery 3rd pharyngeal arch artery UBERON:0003120 pharyngeal arch artery 3 UBERON:0003120 The vessels formed within the third pair of branchial arches in embryogenesis. MP:0006356 3rd arch artery EHDAA2:0000070 AA3 ZFA:0005007 aortic arch 3 ZFA:0005007 carotid arch Wikipedia:Aortic_arches#Arch_3 third aortic arch XAO:0000344 3rd aortic arch artery EMAPA:16687 3rd branchial arch artery EMAPA:16687 3rd pharyngeal arch artery EMAPA:16687 The vessels formed within the fourth pair of branchial arches in embryogenesis. UBERON:0004350 AAO:0010420 EHDAA2:0000087 EMAPA:17004 SCTID:308777005 TAO:0005008 Wikipedia:Aortic_arches#Arch_4 XAO:0000355 ZFA:0005008 4th arch artery AA4 aortic arch 4 fourth aortic arch fourth branchial arch artery uberon 4th aortic arch artery 4th branchial arch artery 4th pharyngeal arch artery systemic arch UBERON:0003121 proximal right subclavian pharyngeal arch artery 4 UBERON:0003121 The vessels formed within the fourth pair of branchial arches in embryogenesis. MP:0006354 4th arch artery EHDAA2:0000087 AA4 ZFA:0005008 aortic arch 4 ZFA:0005008 fourth aortic arch XAO:0000355 4th aortic arch artery EMAPA:17004 4th branchial arch artery EMAPA:17004 4th pharyngeal arch artery EMAPA:17004 systemic arch ISBN:0073040584 XAO:0000355 The vessels formed within the sixth pair of branchial arches in embryogenesis. UBERON:0004351 AAO:0010422 EHDAA2:0000102 EMAPA:17005 SCTID:308779008 TAO:0005016 VHOG:0000144 Wikipedia:Aortic_arches#Arch_6 XAO:0000353 ZFA:0005016 6th arch artery AA6 aortic arch 6 sixth aortic arch sixth branchial arch artery uberon 6th aortic arch artery 6th branchial arch artery 6th pharyngeal arch artery pulmonary arch UBERON:0003123 pharyngeal arch artery 6 UBERON:0003123 The vessels formed within the sixth pair of branchial arches in embryogenesis. MP:0006355 6th arch artery EMAPA:17005 AA6 ZFA:0005016 aortic arch 6 ZFA:0005016 sixth aortic arch XAO:0000353 6th aortic arch artery EMAPA:17005 6th branchial arch artery EMAPA:17005 6th pharyngeal arch artery EMAPA:17005 pulmonary arch ISBN:0073040584 The trachea is the portion of the airway that attaches to the bronchi as it branches [GO:dph]. AAO:0010140 BTO:0001388 CALOHA:TS-1060 EFO:0000935 EHDAA2:0002066 EHDAA:3078 EMAPA:16853 EV:0100040 FMA:7394 GAID:361 MA:0000441 MAT:0000137 MESH:D014132 MIAA:0000137 NCIT:C12428 SCTID:181213009 VHOG:0000371 Wikipedia:Vertebrate_trachea XAO:0000118 cartilaginous trachea windpipe uberon tracheal tubule UBERON:0003126 trachea UBERON:0003126 The trachea is the portion of the airway that attaches to the bronchi as it branches [GO:dph]. GO:0060438 Wikipedia:Vertebrate_trachea tracheal tubule BTO:0001388 Upper portion of the skull that excludes the mandible (when present in the organism). BTO:0001328 EFO:0000831 EHDAA:6029 FMA:71325 MA:0000316 MAT:0000340 MIAA:0000340 SCTID:181889008 VHOG:0000334 Wikipedia:Cranium_(anatomy) bones of cranium set of bones of cranium skull minus mandible upper part of skull uberon calvarium epicranial plate skeletal system of head UBERON:0003128 cranium UBERON:0003128 Upper portion of the skull that excludes the mandible (when present in the organism). Wikipedia:Cranium_(anatomy) http://orcid.org/0000-0002-6601-2165 bones of cranium FMA:71325 set of bones of cranium FMA:71325 calvarium BTO:0001328 Anatomical structure that is part of the head consisting entirely of cranium and mandible[WP]. BTO:0001295 CALOHA:TS-2344 EHDAA2:0000325 EMAPA:17680 FMA:46565 GAID:82 MESH:D012886 NCIT:C12789 SCTID:110530005 Wikipedia:Skull WikipediaCategory:Skull galen:Skull uberon cranial skeleton skeletal system of head UBERON:0003129 skull UBERON:0003129 Anatomical structure that is part of the head consisting entirely of cranium and mandible[WP]. PMID:11523816 Wikipedia:Skull http://sourceforge.net/tracker/?func=detail&aid=2962656&group_id=76834&atid=1205376 An organ involved in reproduction. MA:0001752 MESH:D005835 NCIT:C25177 SCTID:128181006 TGMA:0000591 WBbt:0008422 genital organ reproductive system organ sex organ uberon UBERON:0003133 reproductive organ UBERON:0003133 An organ involved in reproduction. UBERON:xp A female organ involved in reproduction. EMAPA:28540 MA:0000544 female organism reproductive organ female organism reproductive structure female organism reproductive system organ female organism sex organ female reproductive gland/organ female reproductive system organ female sex organ reproductive organ of female organism reproductive structure of female organism reproductive system organ of female organism sex organ of female organism uberon UBERON:0003134 female reproductive organ UBERON:0003134 A female organ involved in reproduction. UBERON:xp female organism reproductive organ OBOL:automatic female organism reproductive structure OBOL:automatic female organism reproductive system organ OBOL:automatic female organism sex organ OBOL:automatic female reproductive gland/organ MA:0000544 reproductive organ of female organism OBOL:automatic reproductive structure of female organism OBOL:automatic reproductive system organ of female organism OBOL:automatic sex organ of female organism OBOL:automatic Any sense organ that functions in (some) detection of chemical stimulus involved in sensory perception of taste (GO:0050912). FMA:77853 gustatory organ system organ gustatory system organ organ of gustatory organ system organ of gustatory system organ of taste system taste organ taste system organ uberon UBERON:0003212 gustatory organ UBERON:0003212 Any sense organ that functions in (some) detection of chemical stimulus involved in sensory perception of taste (GO:0050912). FBC:auto_generated_definition gustatory organ system organ OBOL:automatic gustatory system organ OBOL:automatic organ of gustatory organ system OBOL:automatic organ of gustatory system OBOL:automatic organ of taste system OBOL:automatic taste system organ OBOL:automatic Septum that divides the ovary, the basal portion of a carpel or group of fused carpels, that encloses the ovule(s)[GO]. uberon UBERON:0003218 ovary septum UBERON:0003218 Septum that divides the ovary, the basal portion of a carpel or group of fused carpels, that encloses the ovule(s)[GO]. GO:0080126 An epithelium that is part of a lower jaw [Automatically generated definition]. EHDAA2:0001019 EHDAA:7999 EMAPA:35516 VHOG:0000802 epithelial tissue of lower jaw epithelial tissue of ventral mandibular arch epithelium of ventral mandibular arch lower jaw epithelial tissue lower jaw epithelium ventral mandibular arch epithelial tissue ventral mandibular arch epithelium uberon UBERON:0003236 epithelium of lower jaw UBERON:0003236 An epithelium that is part of a lower jaw [Automatically generated definition]. OBOL:automatic epithelial tissue of lower jaw OBOL:automatic epithelial tissue of ventral mandibular arch OBOL:automatic epithelium of ventral mandibular arch OBOL:automatic lower jaw epithelial tissue OBOL:automatic lower jaw epithelium OBOL:automatic ventral mandibular arch epithelial tissue OBOL:automatic ventral mandibular arch epithelium OBOL:automatic The portion of the yolk sac that is derived from endoderm and lines the yolk sac. EHDAA2:0002215 EHDAA:166 EMAPA:16086 VHOG:0000626 uberon UBERON:0003257 yolk sac endoderm UBERON:0003257 The portion of the yolk sac that is derived from endoderm and lines the yolk sac. UBERON:cjm An endoderm that is part of a foregut [Automatically generated definition]. EHDAA2:0004568 EHDAA:524 foregut endoderm uberon UBERON:0003258 endoderm of foregut UBERON:0003258 An endoderm that is part of a foregut [Automatically generated definition]. OBOL:automatic foregut endoderm OBOL:automatic A portion of skeletal muscle tissue that is part of a eye [Automatically generated definition]. EHDAA2:0000486 EHDAA:2923 EMAPA:17844 eye skeletal muscle eye skeletal muscle tissue skeletal muscle tissue of eye uberon eye skeletal muscle group UBERON:0003269 skeletal muscle tissue of eye UBERON:0003269 A portion of skeletal muscle tissue that is part of a eye [Automatically generated definition]. OBOL:automatic eye skeletal muscle OBOL:automatic eye skeletal muscle tissue OBOL:automatic skeletal muscle tissue of eye OBOL:automatic eye skeletal muscle group EHDAA2:0000486 A subdivision of the skeleton that corresponds to the lower part of the mouth. The lower jaw skeleton includes the following elements, when present: lower jaw teeth, the mandible and other lower jaw bones, and Meckel's cartilage. lower jaw mandible AAO:0000274 EHDAA2:0004606 EHDAA:8005 EMAPA:17910 FMA:54398 MA:0001906 TAO:0001273 VHOG:0000428 XAO:0003084 ZFA:0001273 lower jaw skeleton uberon mandibular series UBERON:0003278 skeleton of lower jaw UBERON:0003278 A subdivision of the skeleton that corresponds to the lower part of the mouth. The lower jaw skeleton includes the following elements, when present: lower jaw teeth, the mandible and other lower jaw bones, and Meckel's cartilage. http://orcid.org/0000-0002-6601-2165 lower jaw MA:0001906 ZFA:0001273 mandible ZFA:0001273 lower jaw skeleton AAO:0000274 mandibular series ZFA:0001273 An endothelium that is part of a trachea. EHDAA:3082 RETIRED_EHDAA2:0002068 endothelium of windpipe trachea endothelium windpipe endothelium uberon UBERON:0003279 endothelium of trachea UBERON:0003279 An endothelium that is part of a trachea. OBOL:automatic endothelium of windpipe OBOL:automatic trachea endothelium OBOL:automatic windpipe endothelium OBOL:automatic A meninx that is part of a midbrain [Automatically generated definition]. EHDAA2:0001174 EHDAA:3708 EMAPA:17791 MA:0001058 RETIRED_EHDAA2:0001109 VHOG:0000012 midbrain meninx uberon UBERON:0003288 meninx of midbrain UBERON:0003288 A meninx that is part of a midbrain [Automatically generated definition]. OBOL:automatic midbrain meninx OBOL:automatic A meninx that is part of a telencephalon [Automatically generated definition]. EHDAA2:0001990 EHDAA:5476 EMAPA:17774 MA:0000979 VHOG:0000010 telencephalon meninx uberon UBERON:0003289 meninx of telencephalon UBERON:0003289 A meninx that is part of a telencephalon [Automatically generated definition]. OBOL:automatic telencephalon meninx OBOL:automatic A meninx that is part of a diencephalon [Automatically generated definition]. EHDAA2:0000399 EHDAA:5458 EMAPA:17764 MA:0000826 VHOG:0000009 between brain meninges between brain meninx diencephalon meninges diencephalon meninx interbrain meninges interbrain meninx mature diencephalon meninges mature diencephalon meninx meninges of between brain meninges of diencephalon meninges of interbrain meninges of mature diencephalon meninx of between brain meninx of interbrain meninx of mature diencephalon uberon UBERON:0003290 meninx of diencephalon UBERON:0003290 A meninx that is part of a diencephalon [Automatically generated definition]. OBOL:automatic between brain meninges OBOL:automatic between brain meninx OBOL:automatic diencephalon meninges OBOL:automatic diencephalon meninx OBOL:automatic interbrain meninges OBOL:automatic interbrain meninx OBOL:automatic mature diencephalon meninges OBOL:automatic mature diencephalon meninx OBOL:automatic meninges of between brain OBOL:automatic meninges of diencephalon OBOL:automatic meninges of interbrain OBOL:automatic meninges of mature diencephalon OBOL:automatic meninx of between brain OBOL:automatic meninx of interbrain OBOL:automatic meninx of mature diencephalon OBOL:automatic A meninx that is part of a hindbrain [Automatically generated definition]. EHDAA2:0000770 EHDAA:3688 EMAPA:17783 MA:0000987 VHOG:0000011 hindbrain meninges hindbrain meninx meninges of hindbrain uberon UBERON:0003291 meninx of hindbrain UBERON:0003291 A meninx that is part of a hindbrain [Automatically generated definition]. OBOL:automatic hindbrain meninges OBOL:automatic hindbrain meninx OBOL:automatic meninges of hindbrain OBOL:automatic A meninx that is part of a spinal cord [Automatically generated definition]. CALOHA:TS-2148 EHDAA2:0001895 EHDAA:2865 EMAPA:17804 MA:0001130 NCIT:C12350 SCTID:181097002 VHOG:0000443 meninges of spinal cord spinal cord meninges spinal cord meninx spinal meninx uberon UBERON:0003292 meninx of spinal cord UBERON:0003292 A meninx that is part of a spinal cord [Automatically generated definition]. OBOL:automatic meninges of spinal cord OBOL:automatic spinal cord meninges OBOL:automatic spinal cord meninx OBOL:automatic A gland that is part of a foregut [Automatically generated definition]. EHDAA2:0000567 EHDAA:950 EMAPA:16557 VHOG:0000650 foregut gland uberon UBERON:0003294 gland of foregut UBERON:0003294 A gland that is part of a foregut [Automatically generated definition]. OBOL:automatic foregut gland OBOL:automatic Racemose mucous glands beneath the mucous membrane of the pharynx. BTO:0004849 EHDAA2:0001461 EHDAA:2967 FMA:55075 pharynx gland uberon glandulae pharyngeae UBERON:0003295 pharyngeal gland UBERON:0003295 Racemose mucous glands beneath the mucous membrane of the pharynx. http://www.biology-online.org/dictionary/ pharynx gland EHDAA2:0001461 glandulae pharyngeae BTO:0004849 Any gland that is part of the diencephalon. Examples: pineal gland, neurohypophysis. EHDAA2:0000395 EMAPA:16897 VHOG:0000653 diencephalon gland interbrain gland uberon UBERON:0003296 gland of diencephalon UBERON:0003296 Any gland that is part of the diencephalon. Examples: pineal gland, neurohypophysis. http://orcid.org/0000-0002-6601-2165 diencephalon gland OBOL:automatic interbrain gland OBOL:automatic A gland that is part of a integumental system [Automatically generated definition]. EHDAA2:0000837 EMAPA:17758 MA:0000144 VHOG:0000654 integumental gland integumental system gland integumentary gland uberon UBERON:0003297 gland of integumental system UBERON:0003297 A gland that is part of a integumental system [Automatically generated definition]. OBOL:automatic integumental gland http://orcid.org/0000-0002-6601-2165 integumental system gland http://orcid.org/0000-0002-6601-2165 integumentary gland http://orcid.org/0000-0002-6601-2165 A blood island that is part of a mesoderm. UBERON:0003305 EHDAA2:0003241 EHDAA:170 uberon mesenchyme blood island UBERON:0003304 mesoderm blood island UBERON:0003304 A blood island that is part of a mesoderm. OBOL:automatic mesenchyme blood island OBOL:automatic Mesenchyme that is part of a developing camera-type eye. EHDAA2:0000485 EHDAA:2910 EMAPA:16673 VHOG:0001084 mesenchyme of eye uberon UBERON:0003314 eye mesenchyme UBERON:0003314 Mesenchyme that is part of a developing camera-type eye. OBOL:automatic mesenchyme of eye OBOL:automatic Mesenchyme that is part of a developing ovary [Automatically generated definition]. EHDAA2:0001362 EHDAA:8128 VHOG:0001441 female reproductive system gonad mesenchyme female reproductive system gonada mesenchyme gonad of female reproductive system mesenchyme gonada of female reproductive system mesenchyme mesenchyme of female reproductive system gonad mesenchyme of female reproductive system gonada mesenchyme of gonad of female reproductive system mesenchyme of gonada of female reproductive system ovary mesenchyme uberon UBERON:0003315 mesenchyme of ovary UBERON:0003315 Mesenchyme that is part of a developing ovary [Automatically generated definition]. OBOL:automatic female reproductive system gonad mesenchyme OBOL:automatic female reproductive system gonada mesenchyme OBOL:automatic gonad of female reproductive system mesenchyme OBOL:automatic gonada of female reproductive system mesenchyme OBOL:automatic mesenchyme of female reproductive system gonad OBOL:automatic mesenchyme of female reproductive system gonada OBOL:automatic mesenchyme of gonad of female reproductive system OBOL:automatic mesenchyme of gonada of female reproductive system OBOL:automatic ovary mesenchyme OBOL:automatic The portion of the yolk sac that is derived from mesoderm and consists of mesenchyme. UBERON:0003264 EHDAA2:0002216 EHDAA:168 EHDAA:205 EMAPA:16087 EMAPA:16267 VHOG:0000503 VHOG:0000617 yolk sac mesenchyme uberon UBERON:0003316 mesenchyme of yolk sac UBERON:0003316 The portion of the yolk sac that is derived from mesoderm and consists of mesenchyme. UBERON:cjm yolk sac mesenchyme OBOL:automatic Mesenchyme that is part of a developing lower jaw [Automatically generated definition]. EHDAA2:0001024 EHDAA:8003 EMAPA:17916 VHOG:0001069 lower jaw mesenchyme mesenchyme of ventral mandibular arch ventral mandibular arch mesenchyme uberon UBERON:0003324 mesenchyme of lower jaw UBERON:0003324 Mesenchyme that is part of a developing lower jaw [Automatically generated definition]. OBOL:automatic lower jaw mesenchyme OBOL:automatic mesenchyme of ventral mandibular arch OBOL:automatic ventral mandibular arch mesenchyme OBOL:automatic A spatially aggregated collection of nerve cell bodies in the PNS, consisting of one or more subpopulations that share cell type, chemical phenotype, and connections. (CUMBO). BIRNLEX:2548 BTO:0001123 EMAPA:32814 MA:0001161 peripheral nervous system ganglion uberon UBERON:0003338 ganglion of peripheral nervous system UBERON:0003338 A spatially aggregated collection of nerve cell bodies in the PNS, consisting of one or more subpopulations that share cell type, chemical phenotype, and connections. (CUMBO). BIRNLEX:2548 peripheral nervous system ganglion OBOL:automatic A ganglion that is part of a central nervous system [Automatically generated definition]. EHDAA2:0000227 EMAPA:16658 FMA:83843 central nervous system ganglion ganglion of neuraxis neuraxis ganglion uberon UBERON:0003339 ganglion of central nervous system UBERON:0003339 A ganglion that is part of a central nervous system [Automatically generated definition]. OBOL:automatic central nervous system ganglion OBOL:automatic ganglion of neuraxis OBOL:automatic neuraxis ganglion OBOL:automatic A mucosa that is part of a oral opening [Automatically generated definition]. SCTID:362083000 mucosa of oral opening mucosa of oral part of face mucosa of organ of oral opening mucosa of organ of oral part of face mucosa of organ of oral region mucosa of organ of subdivision of mouth mucosa of subdivision of mouth mucous membrane of oral opening mucous membrane of oral part of face mucous membrane of oral region mucous membrane of subdivision of mouth oral opening mucosa oral opening mucosa of organ oral opening mucous membrane oral opening organ mucosa oral part of face mucosa oral part of face mucosa of organ oral part of face mucous membrane oral part of face organ mucosa oral region mucosa oral region mucosa of organ oral region mucous membrane oral region organ mucosa organ mucosa of oral opening organ mucosa of oral part of face organ mucosa of oral region organ mucosa of subdivision of mouth subdivision of mouth mucosa subdivision of mouth mucosa of organ subdivision of mouth mucous membrane subdivision of mouth organ mucosa uberon UBERON:0003343 mucosa of oral region UBERON:0003343 A mucosa that is part of a oral opening [Automatically generated definition]. OBOL:automatic mucosa of oral opening OBOL:automatic mucosa of oral part of face OBOL:automatic mucosa of organ of oral opening OBOL:automatic mucosa of organ of oral part of face OBOL:automatic mucosa of organ of oral region OBOL:automatic mucosa of organ of subdivision of mouth OBOL:automatic mucosa of subdivision of mouth OBOL:automatic mucous membrane of oral opening OBOL:automatic mucous membrane of oral part of face OBOL:automatic mucous membrane of oral region OBOL:automatic mucous membrane of subdivision of mouth OBOL:automatic oral opening mucosa OBOL:automatic oral opening mucosa of organ OBOL:automatic oral opening mucous membrane OBOL:automatic oral opening organ mucosa OBOL:automatic oral part of face mucosa OBOL:automatic oral part of face mucosa of organ OBOL:automatic oral part of face mucous membrane OBOL:automatic oral part of face organ mucosa OBOL:automatic oral region mucosa OBOL:automatic oral region mucosa of organ OBOL:automatic oral region mucous membrane OBOL:automatic oral region organ mucosa OBOL:automatic organ mucosa of oral opening OBOL:automatic organ mucosa of oral part of face OBOL:automatic organ mucosa of oral region OBOL:automatic organ mucosa of subdivision of mouth OBOL:automatic subdivision of mouth mucosa OBOL:automatic subdivision of mouth mucosa of organ OBOL:automatic subdivision of mouth mucous membrane OBOL:automatic subdivision of mouth organ mucosa OBOL:automatic A layer of epithelial cells on the surface of the mucosa. BTO:0003752 uberon lamina epithelialis mucosa lamina epithelialis mucosae UBERON:0003350 lies on top of lamina propria epithelium of mucosa UBERON:0003350 A layer of epithelial cells on the surface of the mucosa. BTO:0003752 lamina epithelialis mucosa BTO:0003752 lamina epithelialis mucosae BTO:0003752 An epithelium that is part of a pharynx [Automatically generated definition]. BSA:0000112 BTO:0005240 EMAPA:16708 MA:0002725 RETIRED_EHDAA2:0001460 TAO:0001174 XAO:0003202 ZFA:0001174 epithelial tissue of pharynx epithelium of pharynx pharynx epithelial tissue pharynx epithelium uberon UBERON:0003351 pharyngeal epithelium UBERON:0003351 An epithelium that is part of a pharynx [Automatically generated definition]. OBOL:automatic epithelial tissue of pharynx OBOL:automatic epithelium of pharynx OBOL:automatic pharynx epithelial tissue OBOL:automatic pharynx epithelium OBOL:automatic An epithelium that is part of a tongue [Automatically generated definition]. BTO:0000992 CALOHA:TS-1051 EHDAA2:0004598 EMAPA:17881 FMA:284658 MA:0001592 NCIT:C49300 epithelial tissue of tongue tongue epithelial tissue tongue epithelium uberon lingual epithelium UBERON:0003357 examples: tongue squamous epithelium, keratined, non-keratinized and parakeratinized epithelium, as well as gustatory epithelium. Note that not all these subtypes are named in individual anatomy ontologies. epithelium of tongue UBERON:0003357 An epithelium that is part of a tongue [Automatically generated definition]. OBOL:automatic epithelial tissue of tongue OBOL:automatic tongue epithelial tissue OBOL:automatic tongue epithelium OBOL:automatic lingual epithelium BTO:0000992 An epithelium that is part of a right lung [Automatically generated definition]. EMAPA:17663 MA:0003132 epithelial tissue of right lung right lung epithelial tissue right lung epithelium uberon UBERON:0003364 epithelium of right lung UBERON:0003364 An epithelium that is part of a right lung [Automatically generated definition]. OBOL:automatic epithelial tissue of right lung OBOL:automatic right lung epithelial tissue OBOL:automatic right lung epithelium OBOL:automatic An epithelium that is part of a left lung [Automatically generated definition]. EMAPA:17655 MA:0003131 epithelial tissue of left lung left lung epithelial tissue left lung epithelium uberon UBERON:0003365 epithelium of left lung UBERON:0003365 An epithelium that is part of a left lung [Automatically generated definition]. OBOL:automatic epithelial tissue of left lung OBOL:automatic left lung epithelial tissue OBOL:automatic left lung epithelium OBOL:automatic An unilaminar epithelium that surrounds a pectoral appendage bud. UBERON:0005231 UBERON:0005663 EHDAA2:0002134 EMAPA:16407 VHOG:0001047 uberon arm ectoderm UBERON:0003372 pectoral appendage bud ectoderm UBERON:0003372 An unilaminar epithelium that surrounds a pectoral appendage bud. OBOL:automatic arm ectoderm OBOL:automatic A portion of cardiac muscle tissue that is part of a right atrium [Automatically generated definition]. EHDAA2:0004155 EMAPA:17326 FMA:7282 SCTID:362018002 VHOG:0001227 cardiac muscle of cardiac right atrium cardiac muscle of heart right atrium cardiac muscle tissue of heart right atrium cardiac muscle tissue of right atrium cardiac muscle tissue of right atrium of heart myocardium of right atrium right atrium heart muscle right atrium myocardium textus muscularis of myocardium of right atrium textus muscularis of myocardium of right atrium of heart textus muscularis of myocardium of right cardiac atrium uberon UBERON:0003379 cardiac muscle of right atrium UBERON:0003379 A portion of cardiac muscle tissue that is part of a right atrium [Automatically generated definition]. OBOL:automatic cardiac muscle of cardiac right atrium OBOL:automatic cardiac muscle of heart right atrium OBOL:automatic cardiac muscle tissue of heart right atrium OBOL:automatic cardiac muscle tissue of right atrium OBOL:automatic cardiac muscle tissue of right atrium of heart OBOL:automatic right atrium heart muscle EHDAA2:0004155 right atrium myocardium VHOG:0001227 textus muscularis of myocardium of right atrium OBOL:automatic textus muscularis of myocardium of right atrium of heart OBOL:automatic textus muscularis of myocardium of right cardiac atrium OBOL:automatic A portion of cardiac muscle tissue that is part of a left atrium [Automatically generated definition]. EHDAA2:0004154 EMAPA:17320 FMA:7285 SCTID:189936008 VHOG:0001225 cardiac left atrium cardiac muscle cardiac left atrium cardiac muscle tissue cardiac muscle of cardiac left atrium cardiac muscle of heart left atrium cardiac muscle of left atrium of heart left atrium heart muscle left atrium myocardium myocardium of left atrium textus muscularis of myocardium of cardiac left atrium textus muscularis of myocardium of heart left atrium textus muscularis of myocardium of left atrium textus muscularis of myocardium of left atrium of heart textus muscularis of myocardium of left cardiac atrium uberon UBERON:0003380 cardiac muscle of left atrium UBERON:0003380 A portion of cardiac muscle tissue that is part of a left atrium [Automatically generated definition]. OBOL:automatic cardiac left atrium cardiac muscle OBOL:automatic cardiac left atrium cardiac muscle tissue OBOL:automatic cardiac muscle of cardiac left atrium OBOL:automatic cardiac muscle of heart left atrium OBOL:automatic cardiac muscle of left atrium of heart OBOL:automatic left atrium heart muscle EHDAA2:0004154 left atrium myocardium VHOG:0001225 textus muscularis of myocardium of cardiac left atrium OBOL:automatic textus muscularis of myocardium of heart left atrium OBOL:automatic textus muscularis of myocardium of left atrium OBOL:automatic textus muscularis of myocardium of left atrium of heart OBOL:automatic textus muscularis of myocardium of left cardiac atrium OBOL:automatic A portion of cardiac muscle tissue that is part of a right ventricle [Automatically generated definition]. EMAPA:17342 FMA:83452 VHOG:0001236 cardiac muscle tissue of right ventricle right ventricular cardiac muscle tissue uberon right ventricle cardiac muscle UBERON:0003381 cardiac muscle of right ventricle UBERON:0003381 A portion of cardiac muscle tissue that is part of a right ventricle [Automatically generated definition]. OBOL:automatic cardiac muscle tissue of right ventricle FMA:83452 right ventricular cardiac muscle tissue GO:0003221 right ventricle cardiac muscle VHOG:0001236 A portion of cardiac muscle tissue that is part of a left ventricle [Automatically generated definition]. EMAPA:17339 FMA:83453 VHOG:0001234 cardiac muscle tissue of left ventricle left ventricular cardiac muscle tissue uberon left ventricle cardiac muscle UBERON:0003382 cardiac muscle of left ventricle UBERON:0003382 A portion of cardiac muscle tissue that is part of a left ventricle [Automatically generated definition]. OBOL:automatic cardiac muscle tissue of left ventricle FMA:83453 left ventricular cardiac muscle tissue GO:0003220 left ventricle cardiac muscle VHOG:0001234 A portion of cardiac muscle tissue that is part of an interventricular septum [Automatically generated definition]. EHDAA2:0004158 EMAPA:17335 FMA:84084 VHOG:0000999 cardiac muscle of interventricular septum cardiac muscle tissue of interventricular septum interventricular septum cardiac muscle interventricular septum heart muscle interventricular septum myocardium uberon interventricular septum muscle UBERON:0003383 cardiac muscle tissue of interventricular septum UBERON:0003383 A portion of cardiac muscle tissue that is part of an interventricular septum [Automatically generated definition]. OBOL:automatic cardiac muscle tissue of interventricular septum FMA:84084 interventricular septum cardiac muscle VHOG:0000999 interventricular septum heart muscle EHDAA2:0004158 interventricular septum myocardium VHOG:0000999 interventricular septum muscle http://orcid.org/0000-0002-6601-2165 A portion of skeletal muscle tissue that is part of a pharynx [Automatically generated definition]. EMAPA:18963 pharynx skeletal muscle pharynx skeletal muscle tissue skeletal muscle tissue of pharynx uberon UBERON:0003384 skeletal muscle tissue of pharynx UBERON:0003384 A portion of skeletal muscle tissue that is part of a pharynx [Automatically generated definition]. OBOL:automatic pharynx skeletal muscle OBOL:automatic pharynx skeletal muscle tissue OBOL:automatic skeletal muscle tissue of pharynx OBOL:automatic Any of the striated muscles that move the eye and include: superior rectus, inferior rectus, medial rectus, lateral rectus, superior oblique, inferior oblique, retractor bulbi. EMAPA:18807 MA:0001268 ocular smooth muscle uberon UBERON:0003386 smooth muscle of eye UBERON:0003386 Any of the striated muscles that move the eye and include: superior rectus, inferior rectus, medial rectus, lateral rectus, superior oblique, inferior oblique, retractor bulbi. MGI:cwg MP:0005247 ocular smooth muscle MA:0001268 A portion of smooth muscle tissue that is part of a trachea [Automatically generated definition]. UBERON:0004244 BTO:0001391 EMAPA:19192 FMA:262010 MA:0001863 NCIT:C49306 trachea smooth muscle tracheal smooth muscle uberon UBERON:0003387 smooth muscle of trachea UBERON:0003387 A portion of smooth muscle tissue that is part of a trachea [Automatically generated definition]. OBOL:automatic trachea smooth muscle MA:0001863 tracheal smooth muscle BTO:0001391 A mesothelium that is part of a pericardium [Automatically generated definition]. RETIRED_EHDAA2:0001436 cavity of pericardial sac meso-epithelium cavity of pericardial sac mesothelium meso-epithelium of cavity of pericardial sac meso-epithelium of pericardial cavity mesothelium of cavity of pericardial sac pericardial cavity meso-epithelium pericardial cavity mesothelium uberon UBERON:0003388 mesothelium of pericardial cavity UBERON:0003388 A mesothelium that is part of a pericardium [Automatically generated definition]. OBOL:automatic cavity of pericardial sac meso-epithelium OBOL:automatic cavity of pericardial sac mesothelium OBOL:automatic meso-epithelium of cavity of pericardial sac OBOL:automatic meso-epithelium of pericardial cavity OBOL:automatic mesothelium of cavity of pericardial sac OBOL:automatic pericardial cavity meso-epithelium OBOL:automatic pericardial cavity mesothelium OBOL:automatic A mesothelium that is part of a diaphragm [Automatically generated definition]. EMAPA:18429 diaphragm meso-epithelium diaphragm mesothelium meso-epithelium of diaphragm meso-epithelium of thoracic diaphragm mesothelium of thoracic diaphragm thoracic diaphragm meso-epithelium thoracic diaphragm mesothelium uberon UBERON:0003389 mesothelium of diaphragm UBERON:0003389 A mesothelium that is part of a diaphragm [Automatically generated definition]. OBOL:automatic diaphragm meso-epithelium OBOL:automatic diaphragm mesothelium OBOL:automatic meso-epithelium of diaphragm OBOL:automatic meso-epithelium of thoracic diaphragm OBOL:automatic mesothelium of thoracic diaphragm OBOL:automatic thoracic diaphragm meso-epithelium OBOL:automatic thoracic diaphragm mesothelium OBOL:automatic A mesothelium that is part of a pleural cavity [Automatically generated definition]. BTO:0003155 EHDAA2:0001476 EMAPA:16775 FMA:18148 meso-epithelium of pleural cavity mesothelium of pleura pleural cavity meso-epithelium pleural cavity mesothelium pleural mesothelium uberon pleura UBERON:0003390 mesothelium of pleural cavity UBERON:0003390 A mesothelium that is part of a pleural cavity [Automatically generated definition]. OBOL:automatic meso-epithelium of pleural cavity OBOL:automatic mesothelium of pleura FMA:18148 pleural cavity meso-epithelium OBOL:automatic pleural cavity mesothelium OBOL:automatic pleural mesothelium EMAPA:16775 pleura EMAPA:16775 A cartilage element that is part of a respiratory system [Automatically generated definition]. EMAPA:18694 MA:0001818 apparatus respiratorius cartilage cartilage of apparatus respiratorius respiratory system cartilage uberon UBERON:0003406 cartilage of respiratory system UBERON:0003406 A cartilage element that is part of a respiratory system [Automatically generated definition]. OBOL:automatic apparatus respiratorius cartilage OBOL:automatic cartilage of apparatus respiratorius OBOL:automatic respiratory system cartilage OBOL:automatic A gland that is part of a digestive tract [Automatically generated definition]. EMAPA:18815 MA:0003202 digestive tract gland gland of digestive tract gland of lower gastrointestinal tract gut gland lower gastrointestinal tract gland uberon UBERON:0003408 gland of digestive tract UBERON:0003408 A gland that is part of a digestive tract [Automatically generated definition]. OBOL:automatic digestive tract gland OBOL:automatic gland of digestive tract OBOL:automatic gland of lower gastrointestinal tract OBOL:automatic gut gland MA:0003202 lower gastrointestinal tract gland OBOL:automatic Any of the mucous, serous, or mixed glands that empty their secretions onto the surface of the tongue. EMAPA:25097 lingual gland tongue gland uberon UBERON:0003409 gland of tongue UBERON:0003409 Any of the mucous, serous, or mixed glands that empty their secretions onto the surface of the tongue. http://www.merriam-webster.com/medical/lingual%20gland lingual gland OBOL:automatic tongue gland OBOL:automatic Mesenchyme that is part of a pectoral appendage bud. UBERON:0005703 EHDAA2:0002135 EHDAA:1703 EMAPA:16408 TAO:0000789 ZFA:0000789 arm mesenchyme upper limb bud mesenchyme wing mesenchyme uberon UBERON:0003413 pectoral appendage bud mesenchyme UBERON:0003413 Mesenchyme that is part of a pectoral appendage bud. OBOL:automatic arm mesenchyme OBOL:automatic upper limb bud mesenchyme EHDAA2:0002135 wing mesenchyme OBOL:automatic Mesenchyme that is part of a developing tongue [Automatically generated definition]. EHDAA2:0004614 EMAPA:17882 tongue mesenchyme uberon UBERON:0003416 mesenchyme of tongue UBERON:0003416 Mesenchyme that is part of a developing tongue [Automatically generated definition]. OBOL:automatic tongue mesenchyme EHDAA2:0004614 An adipose tissue that is part of a dermis [Automatically generated definition]. MA:0000798 adipose tissue of dermis dermis fat tissue dermis fatty tissue fat tissue of dermis fatty tissue of dermis uberon UBERON:0003426 dermis adipose tissue UBERON:0003426 An adipose tissue that is part of a dermis [Automatically generated definition]. OBOL:automatic adipose tissue of dermis OBOL:automatic dermis fat tissue OBOL:automatic dermis fatty tissue OBOL:automatic fat tissue of dermis OBOL:automatic fatty tissue of dermis OBOL:automatic A nerve that is part of an abdomen [Automatically generated definition]. MA:0000521 nerve of abdomen uberon UBERON:0003429 abdomen nerve UBERON:0003429 A nerve that is part of an abdomen [Automatically generated definition]. OBOL:automatic nerve of abdomen OBOL:automatic A nerve that is part of a neck [Automatically generated definition]. MA:0000588 neck (volume) nerve nerve of neck nerve of neck (volume) uberon UBERON:0003430 neck nerve UBERON:0003430 A nerve that is part of a neck [Automatically generated definition]. OBOL:automatic neck (volume) nerve OBOL:automatic nerve of neck OBOL:automatic nerve of neck (volume) OBOL:automatic Any nerve that innervates the iris. EMAPA:35449 MA:0001291 nerve of iris ciliary nerve uberon UBERON:0003438 iris nerve UBERON:0003438 Any nerve that innervates the iris. UBERON:cjm nerve of iris OBOL:automatic A nerve that is part of the trunk region of the body (not to be confused with a nerve trunk). MA:0000515 nerve of torso nerve of trunk torso nerve uberon trunk nerve UBERON:0003439 nerve of trunk region UBERON:0003439 A nerve that is part of the trunk region of the body (not to be confused with a nerve trunk). http://orcid.org/0000-0002-6601-2165 nerve of torso OBOL:automatic nerve of trunk OBOL:automatic torso nerve OBOL:automatic trunk nerve MA:0000515 A nerve that is located in a thoracic cavity [Automatically generated definition]. MA:0000556 cavity of chest nerve cavity of thorax nerve chest cavity nerve nerve of cavity of chest nerve of cavity of thorax nerve of chest cavity nerve of pectoral cavity nerve of thoracic cavity pectoral cavity nerve uberon UBERON:0003443 thoracic cavity nerve UBERON:0003443 A nerve that is located in a thoracic cavity [Automatically generated definition]. OBOL:automatic cavity of chest nerve OBOL:automatic cavity of thorax nerve OBOL:automatic chest cavity nerve OBOL:automatic nerve of cavity of chest OBOL:automatic nerve of cavity of thorax OBOL:automatic nerve of chest cavity OBOL:automatic nerve of pectoral cavity OBOL:automatic nerve of thoracic cavity OBOL:automatic pectoral cavity nerve OBOL:automatic A bone that is part of a head [Automatically generated definition]. EMAPA:35996 MA:0000576 SCTID:118646007 adult head bone adult head bone organ bone of adult head bone of head bone organ of adult head bone organ of head head bone organ uberon craniofacial bone UBERON:0003457 Different sources vary regarding which bones are craniofacial; e.g. hyoid bone head bone UBERON:0003457 A bone that is part of a head [Automatically generated definition]. OBOL:automatic adult head bone OBOL:automatic adult head bone organ OBOL:automatic bone of adult head OBOL:automatic bone of head OBOL:automatic bone organ of adult head OBOL:automatic bone organ of head OBOL:automatic head bone organ OBOL:automatic craniofacial bone http://orcid.org/0000-0002-6601-2165 A bone that is part of a neck [Automatically generated definition]. MA:0000584 bone of neck bone of neck (volume) bone organ of neck bone organ of neck (volume) neck (volume) bone neck (volume) bone organ neck bone organ uberon UBERON:0003458 neck bone UBERON:0003458 A bone that is part of a neck [Automatically generated definition]. OBOL:automatic bone of neck OBOL:automatic bone of neck (volume) OBOL:automatic bone organ of neck OBOL:automatic bone organ of neck (volume) OBOL:automatic neck (volume) bone OBOL:automatic neck (volume) bone organ OBOL:automatic neck bone organ OBOL:automatic A bone that is part of a facial skeleton [Automatically generated definition]. EMAPA:19019 EMAPA:35924 MA:0001482 MA:0003159 NCIT:C63706 SCTID:181799005 bone of facial skeleton facial bone facial skeleton bone uberon bone of viscerocranium viscerocranium bone UBERON:0003462 facial bone UBERON:0003462 A bone that is part of a facial skeleton [Automatically generated definition]. OBOL:automatic bone of facial skeleton OBOL:automatic facial bone EMAPA:19019 facial skeleton bone OBOL:automatic bone of viscerocranium OBOL:automatic viscerocranium bone OBOL:automatic A bone that is part of a trunk [Automatically generated definition]. EMAPA:36583 MA:0000512 SCTID:427358002 bone of torso bone of trunk bone organ of torso bone organ of trunk torso bone torso bone organ trunk bone organ uberon UBERON:0003463 trunk bone UBERON:0003463 A bone that is part of a trunk [Automatically generated definition]. OBOL:automatic bone of torso OBOL:automatic bone of trunk OBOL:automatic bone organ of torso OBOL:automatic bone organ of trunk OBOL:automatic torso bone OBOL:automatic torso bone organ OBOL:automatic trunk bone organ OBOL:automatic An artery that is part of a respiratory system [Automatically generated definition]. MA:0001804 uberon UBERON:0003469 respiratory system artery UBERON:0003469 An artery that is part of a respiratory system [Automatically generated definition]. OBOL:automatic The inferior labial artery (inferior labial branch of facial artery) arises near the angle of the mouth; it passes upward and forward beneath the Triangularis and, penetrating the Orbicularis oris, runs in a tortuous course along the edge of the lower lip between this muscle and the mucous membrane. It supplies the labial glands, the mucous membrane, and the muscles of the lower lip; and anastomoses with the artery of the opposite side, and with the mental branch of the inferior alveolar artery. FMA:49567 MA:0001916 SCTID:145036002 Wikipedia:Inferior_labial_artery inferior labial artery inferior labial branch of facial artery ramus labialis inferior (arteria facialis) uberon UBERON:0003471 artery of lower lip UBERON:0003471 The inferior labial artery (inferior labial branch of facial artery) arises near the angle of the mouth; it passes upward and forward beneath the Triangularis and, penetrating the Orbicularis oris, runs in a tortuous course along the edge of the lower lip between this muscle and the mucous membrane. It supplies the labial glands, the mucous membrane, and the muscles of the lower lip; and anastomoses with the artery of the opposite side, and with the mental branch of the inferior alveolar artery. Wikipedia:Inferior_labial_artery inferior labial artery FMA:49567 inferior labial branch of facial artery FMA:49567 ramus labialis inferior (arteria facialis) FMA:TA An artery that is part of a thoracic cavity[cjm]. MA:0001902 MESH:D013895 uberon thoracic artery UBERON:0003473 thoracic cavity artery UBERON:0003473 An artery that is part of a thoracic cavity[cjm]. https://sourceforge.net/tracker/index.php?func=detail&aid=3317815&group_id=76834&atid=1205376 thoracic artery MESH:A07.231.114.891 One of the arteries supplying a meninix[Automatically generated definition]. GAID:499 MA:0002001 MESH:D008576 Wikipedia:Meningeal_arteries uberon UBERON:0003474 meningeal artery UBERON:0003474 One of the arteries supplying a meninix[Automatically generated definition]. Wikipedia:Meningeal_arteries A vein that is part of a respiratory system [Automatically generated definition]. MA:0001809 MA:0001810 apparatus respiratorius vein respiratory system vein vein of apparatus respiratorius vein of respiratory system uberon UBERON:0003476 respiratory system venous blood vessel UBERON:0003476 A vein that is part of a respiratory system [Automatically generated definition]. OBOL:automatic apparatus respiratorius vein OBOL:automatic respiratory system vein OBOL:automatic vein of apparatus respiratorius OBOL:automatic vein of respiratory system OBOL:automatic The inferior labial vein is the vein receiving blood from the lower lip. FMA:52541 MA:0002253 SCTID:422955002 Wikipedia:Inferior_labial_vein inferior labial vein lower lip vein uberon UBERON:0003478 vein of lower lip UBERON:0003478 The inferior labial vein is the vein receiving blood from the lower lip. Wikipedia:Inferior_labial_vein inferior labial vein FMA:52541 lower lip vein OBOL:automatic A vein that is part of a thoracic cavity [Automatically generated definition]. MA:0001903 cavity of chest vein cavity of thorax vein chest cavity vein pectoral cavity vein vein of cavity of chest vein of cavity of thorax vein of chest cavity vein of pectoral cavity vein of thoracic cavity uberon UBERON:0003479 thoracic cavity vein UBERON:0003479 A vein that is part of a thoracic cavity [Automatically generated definition]. OBOL:automatic cavity of chest vein OBOL:automatic cavity of thorax vein OBOL:automatic chest cavity vein OBOL:automatic pectoral cavity vein OBOL:automatic vein of cavity of chest OBOL:automatic vein of cavity of thorax OBOL:automatic vein of chest cavity OBOL:automatic vein of pectoral cavity OBOL:automatic vein of thoracic cavity OBOL:automatic An endothelium of capillary that is part of a respiratory system [Automatically generated definition]. MA:0001808 apparatus respiratorius blood capillary endothelium apparatus respiratorius capillary endothelium apparatus respiratorius capillary vessel endothelium apparatus respiratorius endothelium of blood capillary apparatus respiratorius endothelium of capillary apparatus respiratorius endothelium of capillary vessel blood capillary endothelium of apparatus respiratorius blood capillary endothelium of respiratory system capillary endothelium of apparatus respiratorius capillary endothelium of respiratory system capillary vessel endothelium of apparatus respiratorius capillary vessel endothelium of respiratory system endothelium of blood capillary of apparatus respiratorius endothelium of blood capillary of respiratory system endothelium of capillary of apparatus respiratorius endothelium of capillary of respiratory system endothelium of capillary vessel of apparatus respiratorius endothelium of capillary vessel of respiratory system respiratory system blood capillary endothelium respiratory system capillary vessel endothelium respiratory system endothelium of blood capillary respiratory system endothelium of capillary respiratory system endothelium of capillary vessel uberon UBERON:0003489 respiratory system capillary endothelium UBERON:0003489 An endothelium of capillary that is part of a respiratory system [Automatically generated definition]. OBOL:automatic apparatus respiratorius blood capillary endothelium OBOL:automatic apparatus respiratorius capillary endothelium OBOL:automatic apparatus respiratorius capillary vessel endothelium OBOL:automatic apparatus respiratorius endothelium of blood capillary OBOL:automatic apparatus respiratorius endothelium of capillary OBOL:automatic apparatus respiratorius endothelium of capillary vessel OBOL:automatic blood capillary endothelium of apparatus respiratorius OBOL:automatic blood capillary endothelium of respiratory system OBOL:automatic capillary endothelium of apparatus respiratorius OBOL:automatic capillary endothelium of respiratory system OBOL:automatic capillary vessel endothelium of apparatus respiratorius OBOL:automatic capillary vessel endothelium of respiratory system OBOL:automatic endothelium of blood capillary of apparatus respiratorius OBOL:automatic endothelium of blood capillary of respiratory system OBOL:automatic endothelium of capillary of apparatus respiratorius OBOL:automatic endothelium of capillary of respiratory system OBOL:automatic endothelium of capillary vessel of apparatus respiratorius OBOL:automatic endothelium of capillary vessel of respiratory system OBOL:automatic respiratory system blood capillary endothelium OBOL:automatic respiratory system capillary vessel endothelium OBOL:automatic respiratory system endothelium of blood capillary OBOL:automatic respiratory system endothelium of capillary OBOL:automatic respiratory system endothelium of capillary vessel OBOL:automatic A venule that is part of a respiratory system [Automatically generated definition]. MA:0001813 apparatus respiratorius venule venule of apparatus respiratorius venule of respiratory system uberon UBERON:0003494 respiratory system venule UBERON:0003494 A venule that is part of a respiratory system [Automatically generated definition]. OBOL:automatic apparatus respiratorius venule OBOL:automatic venule of apparatus respiratorius OBOL:automatic venule of respiratory system OBOL:automatic An arteriole that is part of a respiratory system [Automatically generated definition]. MA:0001803 uberon UBERON:0003495 respiratory system arteriole UBERON:0003495 An arteriole that is part of a respiratory system [Automatically generated definition]. OBOL:automatic A blood vessel that is part of a head [Automatically generated definition]. EMAPA:36610 MA:0000575 SCTID:127865000 adult head blood vessel blood vessel of adult head blood vessel of head uberon UBERON:0003496 head blood vessel UBERON:0003496 A blood vessel that is part of a head [Automatically generated definition]. OBOL:automatic adult head blood vessel OBOL:automatic blood vessel of adult head OBOL:automatic blood vessel of head OBOL:automatic A blood vessel that is part of an abdomen [Automatically generated definition]. MA:0000518 blood vessel of abdomen uberon UBERON:0003497 abdomen blood vessel UBERON:0003497 A blood vessel that is part of an abdomen [Automatically generated definition]. OBOL:automatic blood vessel of abdomen OBOL:automatic A blood vessel that is part of a heart [Automatically generated definition]. EMAPA:35397 MA:0002483 blood vessel of heart uberon cardiac blood vessel UBERON:0003498 heart blood vessel UBERON:0003498 A blood vessel that is part of a heart [Automatically generated definition]. OBOL:automatic blood vessel of heart OBOL:automatic cardiac blood vessel EMAPA:35397 A blood vessel that is part of a brain [Automatically generated definition]. EMAPA:35182 MA:0002769 blood vessel of brain uberon UBERON:0003499 brain blood vessel UBERON:0003499 A blood vessel that is part of a brain [Automatically generated definition]. OBOL:automatic blood vessel of brain OBOL:automatic A blood vessel that is part of a cornea [Automatically generated definition]. EMAPA:36611 MA:0001241 blood vessel of cornea cornea blood vessel uberon UBERON:0003500 corneal blood vessel UBERON:0003500 A blood vessel that is part of a cornea [Automatically generated definition]. https://orcid.org/0000-0002-6601-2165 https://sourceforge.net/tracker/index.php?func=detail&aid=3564332&group_id=36855&atid=440764 blood vessel of cornea OBOL:automatic cornea blood vessel OBOL:automatic A blood vessel that is part of a retina [Automatically generated definition]. EMAPA:36520 GAID:509 MA:0001317 MESH:D012171 SCTID:280692003 XAO:0004153 blood vessel of inner layer of eyeball blood vessel of retina blood vessel of tunica interna of eyeball inner layer of eyeball blood vessel retinal blood vessel tunica interna of eyeball blood vessel uberon UBERON:0003501 retina blood vessel UBERON:0003501 A blood vessel that is part of a retina [Automatically generated definition]. OBOL:automatic blood vessel of inner layer of eyeball OBOL:automatic blood vessel of retina OBOL:automatic blood vessel of tunica interna of eyeball OBOL:automatic inner layer of eyeball blood vessel OBOL:automatic retinal blood vessel OBOL:automatic tunica interna of eyeball blood vessel OBOL:automatic A blood vessel that is part of a neck [Automatically generated definition]. MA:0000583 blood vessel of neck blood vessel of neck (volume) neck (volume) blood vessel uberon UBERON:0003502 neck blood vessel UBERON:0003502 A blood vessel that is part of a neck [Automatically generated definition]. OBOL:automatic blood vessel of neck OBOL:automatic blood vessel of neck (volume) OBOL:automatic neck (volume) blood vessel OBOL:automatic A blood vessel that is part of a respiratory system [Automatically generated definition]. EMAPA:35731 EMAPA:35995 MA:0001799 apparatus respiratorius blood vessel blood vessel of apparatus respiratorius blood vessel of respiratory system uberon UBERON:0003504 respiratory system blood vessel UBERON:0003504 A blood vessel that is part of a respiratory system [Automatically generated definition]. OBOL:automatic apparatus respiratorius blood vessel OBOL:automatic blood vessel of apparatus respiratorius OBOL:automatic blood vessel of respiratory system OBOL:automatic A blood vessel that is part of a trachea. UBERON:0003525 EMAPA:35874 MA:0001852 blood vessel of trachea uberon UBERON:0003505 trachea blood vessel UBERON:0003505 A blood vessel that is part of a trachea. OBOL:automatic blood vessel of trachea OBOL:automatic A blood vessel that is part of the arterial system. Includes artery, arteriole and aorta. EMAPA:35144 MA:0000061 uberon UBERON:0003509 only in MA - supertype of artery, arteriole, aorta. arterial blood vessel UBERON:0003509 A blood vessel that is part of the arterial system. Includes artery, arteriole and aorta. https://orcid.org/0000-0002-6601-2165 A blood vessel that is part of a iris [Automatically generated definition]. MA:0001290 blood vessel of iris uberon UBERON:0003511 iris blood vessel UBERON:0003511 A blood vessel that is part of a iris [Automatically generated definition]. OBOL:automatic blood vessel of iris OBOL:automatic A blood vessel that is part of a lung [Automatically generated definition]. EMAPA:32867 MA:0002457 blood vessel of lung uberon pulmonary vascular element UBERON:0003512 lung blood vessel UBERON:0003512 A blood vessel that is part of a lung [Automatically generated definition]. OBOL:automatic blood vessel of lung OBOL:automatic pulmonary vascular element EMAPA:32867 A blood vessel that is part of a trunk [Automatically generated definition]. MA:0000511 blood vessel of torso blood vessel of trunk torso blood vessel uberon UBERON:0003513 trunk blood vessel UBERON:0003513 A blood vessel that is part of a trunk [Automatically generated definition]. OBOL:automatic blood vessel of torso OBOL:automatic blood vessel of trunk OBOL:automatic torso blood vessel OBOL:automatic A blood vessel that is part of a thoracic cavity [Automatically generated definition]. MA:0000554 blood vessel of cavity of chest blood vessel of cavity of thorax blood vessel of chest cavity blood vessel of pectoral cavity blood vessel of thoracic cavity cavity of chest blood vessel cavity of thorax blood vessel chest cavity blood vessel pectoral cavity blood vessel uberon UBERON:0003519 thoracic cavity blood vessel UBERON:0003519 A blood vessel that is part of a thoracic cavity [Automatically generated definition]. OBOL:automatic blood vessel of cavity of chest OBOL:automatic blood vessel of cavity of thorax OBOL:automatic blood vessel of chest cavity OBOL:automatic blood vessel of pectoral cavity OBOL:automatic blood vessel of thoracic cavity OBOL:automatic cavity of chest blood vessel OBOL:automatic cavity of thorax blood vessel OBOL:automatic chest cavity blood vessel OBOL:automatic pectoral cavity blood vessel OBOL:automatic A capillary that is part of a respiratory system [Automatically generated definition]. MA:0001807 apparatus respiratorius blood capillary apparatus respiratorius capillary apparatus respiratorius capillary vessel blood capillary of apparatus respiratorius blood capillary of respiratory system capillary of apparatus respiratorius capillary of respiratory system capillary vessel of apparatus respiratorius capillary vessel of respiratory system respiratory system blood capillary respiratory system capillary vessel uberon UBERON:0003526 respiratory system capillary UBERON:0003526 A capillary that is part of a respiratory system [Automatically generated definition]. OBOL:automatic apparatus respiratorius blood capillary OBOL:automatic apparatus respiratorius capillary OBOL:automatic apparatus respiratorius capillary vessel OBOL:automatic blood capillary of apparatus respiratorius OBOL:automatic blood capillary of respiratory system OBOL:automatic capillary of apparatus respiratorius OBOL:automatic capillary of respiratory system OBOL:automatic capillary vessel of apparatus respiratorius OBOL:automatic capillary vessel of respiratory system OBOL:automatic respiratory system blood capillary OBOL:automatic respiratory system capillary vessel OBOL:automatic A gray matter that is part of a brain [Automatically generated definition]. EMAPA:35184 MA:0000810 NCIT:C49333 brain grey matter brain grey substance gray matter of brain grey matter of brain grey substance of brain uberon UBERON:0003528 brain gray matter UBERON:0003528 A gray matter that is part of a brain [Automatically generated definition]. OBOL:automatic brain grey matter MA:0000810 brain grey substance OBOL:automatic gray matter of brain OBOL:automatic grey matter of brain OBOL:automatic grey substance of brain OBOL:automatic The regions of the brain that are largely or entirely composed of myelinated nerve cell axons and contain few or no neural cell bodies or dendrites. EMAPA:35187 MA:0000820 NCIT:C49334 brain white matter of neuraxis brain white substance white matter of brain white matter of neuraxis of brain white substance of brain uberon UBERON:0003544 brain white matter UBERON:0003544 The regions of the brain that are largely or entirely composed of myelinated nerve cell axons and contain few or no neural cell bodies or dendrites. MP:0008026 brain white matter of neuraxis OBOL:automatic brain white substance OBOL:automatic white matter of brain OBOL:automatic white matter of neuraxis of brain OBOL:automatic white substance of brain OBOL:automatic A meninx that is part of a brain [Automatically generated definition]. CALOHA:TS-2147 EMAPA:32662 MA:0000813 SCTID:180949007 VHOG:0000013 brain meninges meninges of brain meninx of brain uberon UBERON:0003547 brain meninx UBERON:0003547 A meninx that is part of a brain [Automatically generated definition]. OBOL:automatic brain meninges OBOL:automatic meninges of brain OBOL:automatic meninx of brain OBOL:automatic A meninx that is part of a forebrain [Automatically generated definition]. MA:0000883 forebrain meninx meninges of forebrain meninx of forebrain uberon UBERON:0003548 forebrain meninges UBERON:0003548 A meninx that is part of a forebrain [Automatically generated definition]. OBOL:automatic forebrain meninx OBOL:automatic meninges of forebrain OBOL:automatic meninx of forebrain OBOL:automatic A dura mater that is part of a forebrain. MA:0000885 dura mater of forebrain dura mater of neuraxis of forebrain forebrain dura mater of neuraxis uberon UBERON:0003561 forebrain dura mater UBERON:0003561 A dura mater that is part of a forebrain. OBOL:automatic dura mater of forebrain OBOL:automatic dura mater of neuraxis of forebrain OBOL:automatic forebrain dura mater of neuraxis OBOL:automatic A dura mater that is part of a midbrain [Automatically generated definition]. EMAPA:17793 MA:0001060 VHOG:0000410 dura mater of midbrain dura mater of neuraxis of midbrain midbrain dura mater of neuraxis uberon mesencephalon dura mater UBERON:0003562 midbrain dura mater UBERON:0003562 A dura mater that is part of a midbrain [Automatically generated definition]. OBOL:automatic dura mater of midbrain OBOL:automatic dura mater of neuraxis of midbrain OBOL:automatic midbrain dura mater of neuraxis OBOL:automatic mesencephalon dura mater VHOG:0000410 A dura mater that is part of a telencephalon [Automatically generated definition]. EMAPA:17776 MA:0000981 dura mater of neuraxis of telencephalon dura mater of telencephalon telencephalon dura mater of neuraxis uberon UBERON:0003563 telencephalon dura mater UBERON:0003563 A dura mater that is part of a telencephalon [Automatically generated definition]. OBOL:automatic dura mater of neuraxis of telencephalon OBOL:automatic dura mater of telencephalon OBOL:automatic telencephalon dura mater of neuraxis OBOL:automatic A dura mater that is part of a diencephalon [Automatically generated definition]. EMAPA:17766 MA:0000828 VHOG:0000258 between brain dura mater between brain dura mater of neuraxis diencephalon dura mater of neuraxis dura mater of between brain dura mater of diencephalon dura mater of interbrain dura mater of mature diencephalon dura mater of neuraxis of between brain dura mater of neuraxis of diencephalon dura mater of neuraxis of interbrain dura mater of neuraxis of mature diencephalon interbrain dura mater interbrain dura mater of neuraxis mature diencephalon dura mater mature diencephalon dura mater of neuraxis uberon UBERON:0003564 diencephalon dura mater UBERON:0003564 A dura mater that is part of a diencephalon [Automatically generated definition]. OBOL:automatic between brain dura mater OBOL:automatic between brain dura mater of neuraxis OBOL:automatic diencephalon dura mater of neuraxis OBOL:automatic dura mater of between brain OBOL:automatic dura mater of diencephalon OBOL:automatic dura mater of interbrain OBOL:automatic dura mater of mature diencephalon OBOL:automatic dura mater of neuraxis of between brain OBOL:automatic dura mater of neuraxis of diencephalon OBOL:automatic dura mater of neuraxis of interbrain OBOL:automatic dura mater of neuraxis of mature diencephalon OBOL:automatic interbrain dura mater OBOL:automatic interbrain dura mater of neuraxis OBOL:automatic mature diencephalon dura mater OBOL:automatic mature diencephalon dura mater of neuraxis OBOL:automatic A dura mater that is part of a hindbrain [Automatically generated definition]. EMAPA:17785 MA:0000989 VHOG:0000409 dura mater of hindbrain dura mater of neuraxis of hindbrain hindbrain dura mater of neuraxis uberon rhombencephalon dura mater UBERON:0003565 hindbrain dura mater UBERON:0003565 A dura mater that is part of a hindbrain [Automatically generated definition]. OBOL:automatic dura mater of hindbrain OBOL:automatic dura mater of neuraxis of hindbrain OBOL:automatic hindbrain dura mater of neuraxis OBOL:automatic rhombencephalon dura mater VHOG:0000409 A portion of connective tissue that is part of a head [Automatically generated definition]. MA:0000577 adult head connective tissue adult head portion of connective tissue adult head textus connectivus connective tissue of adult head connective tissue of head head portion of connective tissue head textus connectivus portion of connective tissue of adult head portion of connective tissue of head textus connectivus of adult head textus connectivus of head uberon UBERON:0003566 head connective tissue UBERON:0003566 A portion of connective tissue that is part of a head [Automatically generated definition]. OBOL:automatic adult head connective tissue OBOL:automatic adult head portion of connective tissue OBOL:automatic adult head textus connectivus OBOL:automatic connective tissue of adult head OBOL:automatic connective tissue of head OBOL:automatic head portion of connective tissue OBOL:automatic head textus connectivus OBOL:automatic portion of connective tissue of adult head OBOL:automatic portion of connective tissue of head OBOL:automatic textus connectivus of adult head OBOL:automatic textus connectivus of head OBOL:automatic A portion of connective tissue that is part of an abdomen [Automatically generated definition]. MA:0000519 abdomen portion of connective tissue abdomen textus connectivus connective tissue of abdomen portion of connective tissue of abdomen textus connectivus of abdomen uberon UBERON:0003567 abdomen connective tissue UBERON:0003567 A portion of connective tissue that is part of an abdomen [Automatically generated definition]. OBOL:automatic abdomen portion of connective tissue OBOL:automatic abdomen textus connectivus OBOL:automatic connective tissue of abdomen OBOL:automatic portion of connective tissue of abdomen OBOL:automatic textus connectivus of abdomen OBOL:automatic A portion of connective tissue that is part of a neck [Automatically generated definition]. MA:0000585 connective tissue of neck connective tissue of neck (volume) neck (volume) connective tissue neck (volume) portion of connective tissue neck (volume) textus connectivus neck portion of connective tissue neck textus connectivus portion of connective tissue of neck portion of connective tissue of neck (volume) textus connectivus of neck textus connectivus of neck (volume) uberon UBERON:0003568 neck connective tissue UBERON:0003568 A portion of connective tissue that is part of a neck [Automatically generated definition]. OBOL:automatic connective tissue of neck OBOL:automatic connective tissue of neck (volume) OBOL:automatic neck (volume) connective tissue OBOL:automatic neck (volume) portion of connective tissue OBOL:automatic neck (volume) textus connectivus OBOL:automatic neck portion of connective tissue OBOL:automatic neck textus connectivus OBOL:automatic portion of connective tissue of neck OBOL:automatic portion of connective tissue of neck (volume) OBOL:automatic textus connectivus of neck OBOL:automatic textus connectivus of neck (volume) OBOL:automatic A portion of connective tissue that is part of a respiratory system [Automatically generated definition]. EMAPA:35968 EMAPA:35977 MA:0001814 apparatus respiratorius connective tissue apparatus respiratorius portion of connective tissue apparatus respiratorius textus connectivus connective tissue of apparatus respiratorius connective tissue of respiratory system portion of connective tissue of apparatus respiratorius portion of connective tissue of respiratory system respiratory system portion of connective tissue respiratory system textus connectivus textus connectivus of apparatus respiratorius textus connectivus of respiratory system uberon UBERON:0003570 respiratory system connective tissue UBERON:0003570 A portion of connective tissue that is part of a respiratory system [Automatically generated definition]. OBOL:automatic apparatus respiratorius connective tissue OBOL:automatic apparatus respiratorius portion of connective tissue OBOL:automatic apparatus respiratorius textus connectivus OBOL:automatic connective tissue of apparatus respiratorius OBOL:automatic connective tissue of respiratory system OBOL:automatic portion of connective tissue of apparatus respiratorius OBOL:automatic portion of connective tissue of respiratory system OBOL:automatic respiratory system portion of connective tissue OBOL:automatic respiratory system textus connectivus OBOL:automatic textus connectivus of apparatus respiratorius OBOL:automatic textus connectivus of respiratory system OBOL:automatic A portion of connective tissue that is part of a trachea. EMAPA:35876 MA:0001853 connective tissue of trachea connective tissue of windpipe uberon UBERON:0003571 trachea connective tissue UBERON:0003571 A portion of connective tissue that is part of a trachea. OBOL:automatic connective tissue of trachea OBOL:automatic connective tissue of windpipe OBOL:automatic A portion of connective tissue that is part of a lower respiratory tract [Automatically generated definition]. MA:0002409 connective tissue of lower respiratory tract lower respiratory tract portion of connective tissue lower respiratory tract textus connectivus portion of connective tissue of lower respiratory tract textus connectivus of lower respiratory tract uberon UBERON:0003580 lower respiratory tract connective tissue UBERON:0003580 A portion of connective tissue that is part of a lower respiratory tract [Automatically generated definition]. OBOL:automatic connective tissue of lower respiratory tract OBOL:automatic lower respiratory tract portion of connective tissue OBOL:automatic lower respiratory tract textus connectivus OBOL:automatic portion of connective tissue of lower respiratory tract OBOL:automatic textus connectivus of lower respiratory tract OBOL:automatic A portion of connective tissue that is part of a larynx [Automatically generated definition]. EMAPA:35471 MA:0001754 NCIT:C49245 connective tissue of larynx larynx portion of connective tissue larynx textus connectivus portion of connective tissue of larynx textus connectivus of larynx uberon laryngeal connective tissue UBERON:0003583 larynx connective tissue UBERON:0003583 A portion of connective tissue that is part of a larynx [Automatically generated definition]. OBOL:automatic connective tissue of larynx OBOL:automatic larynx portion of connective tissue OBOL:automatic larynx textus connectivus OBOL:automatic portion of connective tissue of larynx OBOL:automatic textus connectivus of larynx OBOL:automatic laryngeal connective tissue EMAPA:35471 A portion of connective tissue that is part of a dermis [Automatically generated definition]. EMAPA:36509 MA:0000799 connective tissue of dermis dermis portion of connective tissue dermis textus connectivus portion of connective tissue of dermis textus connectivus of dermis uberon UBERON:0003585 dermis connective tissue UBERON:0003585 A portion of connective tissue that is part of a dermis [Automatically generated definition]. OBOL:automatic connective tissue of dermis OBOL:automatic dermis portion of connective tissue OBOL:automatic dermis textus connectivus OBOL:automatic portion of connective tissue of dermis OBOL:automatic textus connectivus of dermis OBOL:automatic A portion of connective tissue that is part of a trunk [Automatically generated definition]. MA:0000513 connective tissue of torso connective tissue of trunk portion of connective tissue of torso portion of connective tissue of trunk textus connectivus of torso textus connectivus of trunk torso connective tissue torso portion of connective tissue torso textus connectivus trunk portion of connective tissue trunk textus connectivus uberon UBERON:0003586 trunk connective tissue UBERON:0003586 A portion of connective tissue that is part of a trunk [Automatically generated definition]. OBOL:automatic connective tissue of torso OBOL:automatic connective tissue of trunk OBOL:automatic portion of connective tissue of torso OBOL:automatic portion of connective tissue of trunk OBOL:automatic textus connectivus of torso OBOL:automatic textus connectivus of trunk OBOL:automatic torso connective tissue OBOL:automatic torso portion of connective tissue OBOL:automatic torso textus connectivus OBOL:automatic trunk portion of connective tissue OBOL:automatic trunk textus connectivus OBOL:automatic A portion of connective tissue that is part of a bronchus [Automatically generated definition]. EMAPA:32690 EMAPA:35193 MA:0001831 NCIT:C49210 bronchi connective tissue bronchi portion of connective tissue bronchi textus connectivus bronchial trunk connective tissue bronchial trunk portion of connective tissue bronchial trunk textus connectivus bronchus portion of connective tissue bronchus textus connectivus connective tissue of bronchi connective tissue of bronchial trunk connective tissue of bronchus portion of connective tissue of bronchi portion of connective tissue of bronchial trunk portion of connective tissue of bronchus textus connectivus of bronchi textus connectivus of bronchial trunk textus connectivus of bronchus uberon bronchial connective tissue bronchial mesenchyme UBERON:0003592 bronchus connective tissue UBERON:0003592 A portion of connective tissue that is part of a bronchus [Automatically generated definition]. OBOL:automatic bronchi connective tissue OBOL:automatic bronchi portion of connective tissue OBOL:automatic bronchi textus connectivus OBOL:automatic bronchial trunk connective tissue OBOL:automatic bronchial trunk portion of connective tissue OBOL:automatic bronchial trunk textus connectivus OBOL:automatic bronchus portion of connective tissue OBOL:automatic bronchus textus connectivus OBOL:automatic connective tissue of bronchi OBOL:automatic connective tissue of bronchial trunk OBOL:automatic connective tissue of bronchus OBOL:automatic portion of connective tissue of bronchi OBOL:automatic portion of connective tissue of bronchial trunk OBOL:automatic portion of connective tissue of bronchus OBOL:automatic textus connectivus of bronchi OBOL:automatic textus connectivus of bronchial trunk OBOL:automatic textus connectivus of bronchus OBOL:automatic bronchial connective tissue EMAPA:35193 bronchial mesenchyme EMAPA:32690 A portion of connective tissue that is part of a thoracic cavity [Automatically generated definition]. MA:0000555 cavity of chest connective tissue cavity of chest portion of connective tissue cavity of chest textus connectivus cavity of thorax connective tissue cavity of thorax portion of connective tissue cavity of thorax textus connectivus chest cavity connective tissue chest cavity portion of connective tissue chest cavity textus connectivus connective tissue of cavity of chest connective tissue of cavity of thorax connective tissue of chest cavity connective tissue of pectoral cavity connective tissue of thoracic cavity pectoral cavity connective tissue pectoral cavity portion of connective tissue pectoral cavity textus connectivus portion of connective tissue of cavity of chest portion of connective tissue of cavity of thorax portion of connective tissue of chest cavity portion of connective tissue of pectoral cavity portion of connective tissue of thoracic cavity textus connectivus of cavity of chest textus connectivus of cavity of thorax textus connectivus of chest cavity textus connectivus of pectoral cavity textus connectivus of thoracic cavity thoracic cavity portion of connective tissue thoracic cavity textus connectivus uberon UBERON:0003593 thoracic cavity connective tissue UBERON:0003593 A portion of connective tissue that is part of a thoracic cavity [Automatically generated definition]. OBOL:automatic cavity of chest connective tissue OBOL:automatic cavity of chest portion of connective tissue OBOL:automatic cavity of chest textus connectivus OBOL:automatic cavity of thorax connective tissue OBOL:automatic cavity of thorax portion of connective tissue OBOL:automatic cavity of thorax textus connectivus OBOL:automatic chest cavity connective tissue OBOL:automatic chest cavity portion of connective tissue OBOL:automatic chest cavity textus connectivus OBOL:automatic connective tissue of cavity of chest OBOL:automatic connective tissue of cavity of thorax OBOL:automatic connective tissue of chest cavity OBOL:automatic connective tissue of pectoral cavity OBOL:automatic connective tissue of thoracic cavity OBOL:automatic pectoral cavity connective tissue OBOL:automatic pectoral cavity portion of connective tissue OBOL:automatic pectoral cavity textus connectivus OBOL:automatic portion of connective tissue of cavity of chest OBOL:automatic portion of connective tissue of cavity of thorax OBOL:automatic portion of connective tissue of chest cavity OBOL:automatic portion of connective tissue of pectoral cavity OBOL:automatic portion of connective tissue of thoracic cavity OBOL:automatic textus connectivus of cavity of chest OBOL:automatic textus connectivus of cavity of thorax OBOL:automatic textus connectivus of chest cavity OBOL:automatic textus connectivus of pectoral cavity OBOL:automatic textus connectivus of thoracic cavity OBOL:automatic thoracic cavity portion of connective tissue OBOL:automatic thoracic cavity textus connectivus OBOL:automatic A cartilage that is part of a neck [Automatically generated definition]. MA:0000586 cartilage of neck cartilage of neck (volume) neck (volume) cartilage uberon UBERON:0003601 neck cartilage UBERON:0003601 A cartilage that is part of a neck [Automatically generated definition]. OBOL:automatic cartilage of neck OBOL:automatic cartilage of neck (volume) OBOL:automatic neck (volume) cartilage OBOL:automatic A cartilage that is part of a lower respiratory tract [Automatically generated definition]. MA:0001819 NCIT:C49256 cartilage of lower respiratory tract uberon UBERON:0003603 lower respiratory tract cartilage UBERON:0003603 A cartilage that is part of a lower respiratory tract [Automatically generated definition]. OBOL:automatic cartilage of lower respiratory tract OBOL:automatic The ring-shaped cartilaginous structures that support the trachea. EMAPA:18699 EMAPA:35875 FMA:7434 MA:0001857 NCIT:C49304 SCTID:278979006 Wikipedia:Tracheal_rings cartilage of trachea cartilage of windpipe cartilaginous ring of trachea cartilaginous trachea cartilage cartilago trachealis tracheal cartilage windpipe cartilage uberon cartilage of the trachea ring of the trachea trachea ring tracheal ring UBERON:0003604 trachea cartilage UBERON:0003604 The ring-shaped cartilaginous structures that support the trachea. J:97123 MGI:smb MP:0003120 http://orcid.org/0000-0002-6601-2165 cartilage of trachea OBOL:automatic cartilage of windpipe OBOL:automatic cartilaginous ring of trachea EMAPA:18699 cartilaginous trachea cartilage OBOL:automatic cartilago trachealis FMA:7434 tracheal cartilage FMA:7434 windpipe cartilage OBOL:automatic cartilage of the trachea Wikipedia:Tracheal_rings ring of the trachea Wikipedia:Tracheal_rings tracheal ring Wikipedia:Tracheal_rings A skin gland that is part of a camera-type eye [Automatically generated definition]. MA:0002451 camera-type eye skin gland camera-type eye skin glands camera-type eye skin glands set skin gland of camera-type eye skin gland of vertebrate eye skin glands of camera-type eye skin glands of vertebrate eye skin glands set of camera-type eye skin glands set of vertebrate eye vertebrate eye skin gland vertebrate eye skin glands vertebrate eye skin glands set uberon UBERON:0003605 eye skin gland UBERON:0003605 A skin gland that is part of a camera-type eye [Automatically generated definition]. OBOL:automatic camera-type eye skin gland OBOL:automatic camera-type eye skin glands OBOL:automatic camera-type eye skin glands set OBOL:automatic skin gland of camera-type eye OBOL:automatic skin gland of vertebrate eye OBOL:automatic skin glands of camera-type eye OBOL:automatic skin glands of vertebrate eye OBOL:automatic skin glands set of camera-type eye OBOL:automatic skin glands set of vertebrate eye OBOL:automatic vertebrate eye skin gland OBOL:automatic vertebrate eye skin glands OBOL:automatic vertebrate eye skin glands set OBOL:automatic The dense connective tissue which contains predominantly elastic fibers and is found in the tunica media of the aorta wall. MA:0002859 adult aorta elastic connective tissue adult aorta elastic tissue adult aorta textus connectivus elasticus aorta elastic connective tissue aorta elastic lamina aorta textus connectivus elasticus dorsal aorta elastic connective tissue dorsal aorta elastic tissue dorsal aorta textus connectivus elasticus elastic connective tissue of adult aorta elastic connective tissue of aorta elastic connective tissue of dorsal aorta elastic connective tissue of trunk of aortic tree elastic tissue of adult aorta elastic tissue of aorta elastic tissue of dorsal aorta elastic tissue of trunk of aortic tree textus connectivus elasticus of adult aorta textus connectivus elasticus of aorta textus connectivus elasticus of dorsal aorta textus connectivus elasticus of trunk of aortic tree trunk of aortic tree elastic connective tissue trunk of aortic tree elastic tissue trunk of aortic tree textus connectivus elasticus uberon UBERON:0003609 aorta elastic tissue UBERON:0003609 The dense connective tissue which contains predominantly elastic fibers and is found in the tunica media of the aorta wall. MP:0009862 adult aorta elastic connective tissue OBOL:automatic adult aorta elastic tissue OBOL:automatic adult aorta textus connectivus elasticus OBOL:automatic aorta elastic connective tissue OBOL:automatic aorta elastic lamina MP:0009862 aorta textus connectivus elasticus OBOL:automatic dorsal aorta elastic connective tissue OBOL:automatic dorsal aorta elastic tissue OBOL:automatic dorsal aorta textus connectivus elasticus OBOL:automatic elastic connective tissue of adult aorta OBOL:automatic elastic connective tissue of aorta OBOL:automatic elastic connective tissue of dorsal aorta OBOL:automatic elastic connective tissue of trunk of aortic tree OBOL:automatic elastic tissue of adult aorta OBOL:automatic elastic tissue of aorta OBOL:automatic elastic tissue of dorsal aorta OBOL:automatic elastic tissue of trunk of aortic tree OBOL:automatic textus connectivus elasticus of adult aorta OBOL:automatic textus connectivus elasticus of aorta OBOL:automatic textus connectivus elasticus of dorsal aorta OBOL:automatic textus connectivus elasticus of trunk of aortic tree OBOL:automatic trunk of aortic tree elastic connective tissue OBOL:automatic trunk of aortic tree elastic tissue OBOL:automatic trunk of aortic tree textus connectivus elasticus OBOL:automatic The type of heart connective tissue found in the endocardial layer that consists mainly of elastic fibers. MA:0002858 cardiac elastic tissue elastic connective tissue of heart elastic tissue of heart heart elastic connective tissue heart textus connectivus elasticus textus connectivus elasticus of heart uberon UBERON:0003610 heart elastic tissue UBERON:0003610 The type of heart connective tissue found in the endocardial layer that consists mainly of elastic fibers. MP:0009863 cardiac elastic tissue MP:0009863 elastic connective tissue of heart OBOL:automatic elastic tissue of heart OBOL:automatic heart elastic connective tissue OBOL:automatic heart textus connectivus elasticus OBOL:automatic textus connectivus elasticus of heart OBOL:automatic An elastic tissue that is part of a respiratory system [Automatically generated definition]. MA:0001820 apparatus respiratorius elastic connective tissue apparatus respiratorius elastic tissue apparatus respiratorius textus connectivus elasticus elastic connective tissue of apparatus respiratorius elastic connective tissue of respiratory system elastic tissue of apparatus respiratorius elastic tissue of respiratory system respiratory system elastic connective tissue respiratory system textus connectivus elasticus textus connectivus elasticus of apparatus respiratorius textus connectivus elasticus of respiratory system uberon UBERON:0003611 respiratory system elastic tissue UBERON:0003611 An elastic tissue that is part of a respiratory system [Automatically generated definition]. OBOL:automatic apparatus respiratorius elastic connective tissue OBOL:automatic apparatus respiratorius elastic tissue OBOL:automatic apparatus respiratorius textus connectivus elasticus OBOL:automatic elastic connective tissue of apparatus respiratorius OBOL:automatic elastic connective tissue of respiratory system OBOL:automatic elastic tissue of apparatus respiratorius OBOL:automatic elastic tissue of respiratory system OBOL:automatic respiratory system elastic connective tissue OBOL:automatic respiratory system textus connectivus elasticus OBOL:automatic textus connectivus elasticus of apparatus respiratorius OBOL:automatic textus connectivus elasticus of respiratory system OBOL:automatic An elastic tissue that is part of a circulatory system [Automatically generated definition]. MA:0002857 cardiovascular system elastic connective tissue cardiovascular system textus connectivus elasticus circulatory system elastic connective tissue circulatory system elastic tissue circulatory system textus connectivus elasticus elastic connective tissue of cardiovascular system elastic connective tissue of circulatory system elastic tissue of cardiovascular system elastic tissue of circulatory system textus connectivus elasticus of cardiovascular system textus connectivus elasticus of circulatory system uberon UBERON:0003613 cardiovascular system elastic tissue UBERON:0003613 An elastic tissue that is part of a circulatory system [Automatically generated definition]. OBOL:automatic cardiovascular system elastic connective tissue OBOL:automatic cardiovascular system textus connectivus elasticus OBOL:automatic circulatory system elastic connective tissue OBOL:automatic circulatory system elastic tissue OBOL:automatic circulatory system textus connectivus elasticus OBOL:automatic elastic connective tissue of cardiovascular system OBOL:automatic elastic connective tissue of circulatory system OBOL:automatic elastic tissue of cardiovascular system OBOL:automatic elastic tissue of circulatory system OBOL:automatic textus connectivus elasticus of cardiovascular system OBOL:automatic textus connectivus elasticus of circulatory system OBOL:automatic Elastic tissue layer that lines a blood vessel layer. elastic lamina EMAPA:36300 MA:0002856 blood vessel elastic connective tissue blood vessel textus connectivus elasticus elastic connective tissue of blood vessel elastic tissue of blood vessel textus connectivus elasticus of blood vessel vascular elastic lamina vascular elastic tissue uberon UBERON:0003614 blood vessel elastic tissue UBERON:0003614 Elastic tissue layer that lines a blood vessel layer. http://orcid.org/0000-0002-6601-2165 https://sourceforge.net/p/obo/mammalian-phenotype-requests/2026/ elastic lamina MP:0006083 blood vessel elastic connective tissue OBOL:automatic blood vessel textus connectivus elasticus OBOL:automatic elastic connective tissue of blood vessel OBOL:automatic elastic tissue of blood vessel OBOL:automatic textus connectivus elasticus of blood vessel OBOL:automatic vascular elastic lamina http://orcid.org/0000-0002-6601-2165 vascular elastic tissue MP:0006083 Elastic tissue that is part of a lung [Automatically generated definition]. MA:0002860 elastic connective tissue of lung elastic tissue of lung lung elastic connective tissue lung textus connectivus elasticus textus connectivus elasticus of lung pulmonary elastic fiber uberon UBERON:0003615 lung elastic tissue UBERON:0003615 Elastic tissue that is part of a lung [Automatically generated definition]. OBOL:automatic elastic connective tissue of lung OBOL:automatic elastic tissue of lung OBOL:automatic lung elastic connective tissue OBOL:automatic lung textus connectivus elasticus OBOL:automatic textus connectivus elasticus of lung OBOL:automatic pulmonary elastic fiber http://orcid.org/0000-0002-6601-2165 An elastic tissue that is part of a bronchus [Automatically generated definition]. MA:0001838 NCIT:C49211 bronchi elastic connective tissue bronchi elastic tissue bronchi textus connectivus elasticus bronchial trunk elastic connective tissue bronchial trunk elastic tissue bronchial trunk textus connectivus elasticus bronchus elastic connective tissue bronchus textus connectivus elasticus elastic connective tissue of bronchi elastic connective tissue of bronchial trunk elastic connective tissue of bronchus elastic tissue of bronchi elastic tissue of bronchial trunk elastic tissue of bronchus textus connectivus elasticus of bronchi textus connectivus elasticus of bronchial trunk textus connectivus elasticus of bronchus uberon UBERON:0003616 bronchus elastic tissue UBERON:0003616 An elastic tissue that is part of a bronchus [Automatically generated definition]. OBOL:automatic bronchi elastic connective tissue OBOL:automatic bronchi elastic tissue OBOL:automatic bronchi textus connectivus elasticus OBOL:automatic bronchial trunk elastic connective tissue OBOL:automatic bronchial trunk elastic tissue OBOL:automatic bronchial trunk textus connectivus elasticus OBOL:automatic bronchus elastic connective tissue OBOL:automatic bronchus textus connectivus elasticus OBOL:automatic elastic connective tissue of bronchi OBOL:automatic elastic connective tissue of bronchial trunk OBOL:automatic elastic connective tissue of bronchus OBOL:automatic elastic tissue of bronchi OBOL:automatic elastic tissue of bronchial trunk OBOL:automatic elastic tissue of bronchus OBOL:automatic textus connectivus elasticus of bronchi OBOL:automatic textus connectivus elasticus of bronchial trunk OBOL:automatic textus connectivus elasticus of bronchus OBOL:automatic An elastic tissue that is part of a trachea [Automatically generated definition]. MA:0001861 cartilaginous trachea elastic connective tissue cartilaginous trachea elastic tissue cartilaginous trachea textus connectivus elasticus elastic connective tissue of cartilaginous trachea elastic connective tissue of vertebrate trachea elastic connective tissue of windpipe elastic tissue of cartilaginous trachea elastic tissue of vertebrate trachea elastic tissue of windpipe textus connectivus elasticus of cartilaginous trachea textus connectivus elasticus of vertebrate trachea textus connectivus elasticus of windpipe vertebrate trachea elastic connective tissue vertebrate trachea elastic tissue vertebrate trachea textus connectivus elasticus windpipe elastic connective tissue windpipe elastic tissue windpipe textus connectivus elasticus uberon UBERON:0003617 trachea elastic tissue UBERON:0003617 An elastic tissue that is part of a trachea [Automatically generated definition]. OBOL:automatic cartilaginous trachea elastic connective tissue OBOL:automatic cartilaginous trachea elastic tissue OBOL:automatic cartilaginous trachea textus connectivus elasticus OBOL:automatic elastic connective tissue of cartilaginous trachea OBOL:automatic elastic connective tissue of vertebrate trachea OBOL:automatic elastic connective tissue of windpipe OBOL:automatic elastic tissue of cartilaginous trachea OBOL:automatic elastic tissue of vertebrate trachea OBOL:automatic elastic tissue of windpipe OBOL:automatic textus connectivus elasticus of cartilaginous trachea OBOL:automatic textus connectivus elasticus of vertebrate trachea OBOL:automatic textus connectivus elasticus of windpipe OBOL:automatic vertebrate trachea elastic connective tissue OBOL:automatic vertebrate trachea elastic tissue OBOL:automatic vertebrate trachea textus connectivus elasticus OBOL:automatic windpipe elastic connective tissue OBOL:automatic windpipe elastic tissue OBOL:automatic windpipe textus connectivus elasticus OBOL:automatic The middle layer of the aorta wall, containing the smooth muscle layer and elastic fibers. EMAPA:35138 FMA:74433 MA:0002903 SCTID:48467007 adult aorta tunica media dorsal aorta tunica media trunk of aortic tree tunica media tunica media of adult aorta tunica media of aorta tunica media of dorsal aorta tunica media of trunk of aortic tree uberon UBERON:0003618 aorta tunica media UBERON:0003618 The middle layer of the aorta wall, containing the smooth muscle layer and elastic fibers. MP:0009873 adult aorta tunica media OBOL:automatic dorsal aorta tunica media OBOL:automatic trunk of aortic tree tunica media OBOL:automatic tunica media of adult aorta OBOL:automatic tunica media of aorta OBOL:automatic tunica media of dorsal aorta OBOL:automatic tunica media of trunk of aortic tree OBOL:automatic The innermost layer of the aorta, containing the endothelium and an inner elastic membrane. BTO:0005553 EMAPA:35137 FMA:74419 MA:0002904 SCTID:362031007 adult aorta tunica intima dorsal aorta tunica intima trunk of aortic tree tunica intima tunica intima of adult aorta tunica intima of aorta tunica intima of dorsal aorta tunica intima of trunk of aortic tree uberon UBERON:0003619 aorta tunica intima UBERON:0003619 The innermost layer of the aorta, containing the endothelium and an inner elastic membrane. MP:0009872 adult aorta tunica intima OBOL:automatic dorsal aorta tunica intima OBOL:automatic trunk of aortic tree tunica intima OBOL:automatic tunica intima of adult aorta OBOL:automatic tunica intima of aorta OBOL:automatic tunica intima of dorsal aorta OBOL:automatic tunica intima of trunk of aortic tree OBOL:automatic An arterial blood vessel that is part of a respiratory system [Automatically generated definition]. MA:0001800 uberon UBERON:0003643 respiratory system arterial blood vessel UBERON:0003643 An arterial blood vessel that is part of a respiratory system [Automatically generated definition]. OBOL:automatic The part of the ventral body cavity that is within the abdomen proper (excluding the pelvic cavity). EFO:0000213 EMAPA:36505 FMA:12266 GAID:17 MA:0003057 MESH:D034841 NCIT:C12664 SCTID:361294009 Wikipedia:Abdominal_cavity galen:AbdominalCavity cavity of abdominal compartment cavity of compartment of abdomen space of abdominal compartment uberon UBERON:0003684 abdominal cavity UBERON:0003684 The part of the ventral body cavity that is within the abdomen proper (excluding the pelvic cavity). UBERON:cjm cavity of abdominal compartment FMA:12266 cavity of compartment of abdomen FMA:12266 space of abdominal compartment FMA:12266 Fibrous joint in which the articulating bones or cartilages of the skull are connected by sutural ligaments (scant amount of collagenous dense connective tissue). Examples: sagittal suture, frontal suture. sutura suture EMAPA:35263 FMA:7493 GAID:211 MA:0001475 MESH:D003393 SCTID:244509003 Wikipedia:Suture_(joint) cranium suture suture joint of skull suture of cranium uberon UBERON:0003685 cranial suture UBERON:0003685 Fibrous joint in which the articulating bones or cartilages of the skull are connected by sutural ligaments (scant amount of collagenous dense connective tissue). Examples: sagittal suture, frontal suture. FMA:71385 ISBN:3110148986 Wikipedia:Suture_(joint) suture FMA:71385 cranium suture OBOL:automatic suture of cranium OBOL:automatic In anatomy, in the occipital bone, the foramen magnum is one of the several oval or circular apertures in the base of the skull, through which the medulla oblongata (an extension of the spinal cord) enters and exits the skull vault. Apart from the transmission of the medulla oblongata and its membranes, the foramen magnum transmits the Spinal Accessory nerve, vertebral arteries, the anterior and posterior spinal arteries, the membrana tectoria and alar ligaments. [WP,unvetted]. AAO:0010826 FMA:75306 GAID:228 MESH:D005539 NCIT:C12495 SCTID:244679008 TAO:0002045 Wikipedia:Foramen_magnum ZFA:0005387 uberon UBERON:0003687 Design pattern notes: check whether this fits the foramen design pattern foramen magnum UBERON:0003687 In anatomy, in the occipital bone, the foramen magnum is one of the several oval or circular apertures in the base of the skull, through which the medulla oblongata (an extension of the spinal cord) enters and exits the skull vault. Apart from the transmission of the medulla oblongata and its membranes, the foramen magnum transmits the Spinal Accessory nerve, vertebral arteries, the anterior and posterior spinal arteries, the membrana tectoria and alar ligaments. [WP,unvetted]. Wikipedia:Foramen_magnum The tissues that surround the organs that are present within the abdominal cavity. The abdominal wall tissue is composed of layers of fat, parietal peritoneum, fascia, and muscles. FMA:10429 FMA:259054 GAID:26 MESH:D034861 NCIT:C77608 SCTID:181613000 Wikipedia:Abdominal_wall paries abdominalis wall of abdomen wall of abdomen proper uberon abdominal wall proper layers of the abdominal wall UBERON:0003697 abdominal wall UBERON:0003697 The tissues that surround the organs that are present within the abdominal cavity. The abdominal wall tissue is composed of layers of fat, parietal peritoneum, fascia, and muscles. ncithesaurus:Abdominal_Wall paries abdominalis Wikipedia:Abdominal_wall wall of abdomen FMA:259054 wall of abdomen proper FMA:10429 abdominal wall proper FMA:10429 layers of the abdominal wall Wikipedia:Abdominal_wall A circle of arteries that supply blood to the brain. The Circle of Willis comprises the following arteries: Anterior cerebral artery (left and right); Anterior communicating artery; Internal carotid artery (left and right); Posterior cerebral artery (left and right); Posterior communicating artery (left and right).The basilar artery and middle cerebral arteries, supplying the brain, are also considered part of the circle. arterial circle EHDAA2:0000252 EHDAA:9758 FMA:50454 GAID:486 MESH:D002941 SCTID:362047009 Wikipedia:Circle_of_Willis neuronames:1468 arterial circle of Willis cerebral arterial circle uberon Willis circle UBERON:0003709 circle of Willis UBERON:0003709 A circle of arteries that supply blood to the brain. The Circle of Willis comprises the following arteries: Anterior cerebral artery (left and right); Anterior communicating artery; Internal carotid artery (left and right); Posterior cerebral artery (left and right); Posterior communicating artery (left and right).The basilar artery and middle cerebral arteries, supplying the brain, are also considered part of the circle. Wikipedia:Circle_of_Willis arterial circle Wikipedia:Circle_of_Willis cerebral arterial circle GAID:486 Willis circle GAID:486 The left and right brachiocephalic veins in the upper chest are formed by the union of each corresponding internal jugular vein and subclavian vein. This is at the level of the sternoclavicular joint. These great vessels merge to form the superior vena cava. The brachiocephalic veins are the major veins returning blood to the superior vena cava. EHDAA2:0000182 EHDAA:9868 FMA:4723 GAID:529 MESH:D016121 NCIT:C32816 SCTID:181371003 Wikipedia:Brachiocephalic_vein galen:BrachiocephalicVein brachiocephalic venous tree innominate vein uberon innomiate vein innominate trunk innominate vein innominate veins UBERON:0003711 brachiocephalic vein UBERON:0003711 The left and right brachiocephalic veins in the upper chest are formed by the union of each corresponding internal jugular vein and subclavian vein. This is at the level of the sternoclavicular joint. These great vessels merge to form the superior vena cava. The brachiocephalic veins are the major veins returning blood to the superior vena cava. Wikipedia:Brachiocephalic_vein brachiocephalic venous tree FMA:4723 innominate vein FMA:4723 innomiate vein Wikipedia:Brachiocephalic_vein innominate trunk Wikipedia:Brachiocephalic_vein innominate vein GAID:529 Wikipedia:Brachiocephalic_vein innominate veins Wikipedia:Brachiocephalic_vein Portion of tissue in the nervous system which consists of neurons and glial cells, and may also contain parts of the vasculature. AAO:0000325 AEO:0000123 EHDAA2:0003123 FMA:9642 GAID:609 MESH:D009417 NCIT:C13052 SCTID:91728009 nerve tissue nervous tissue portion of neural tissue uberon UBERON:0003714 neural tissue UBERON:0003714 Portion of tissue in the nervous system which consists of neurons and glial cells, and may also contain parts of the vasculature. FMA:9642 nerve tissue FMA:9642 nervous tissue FMA:9642 portion of neural tissue FMA:9642 The major nerves supplying sympathetic innervation to the abdomen, including the greater, lesser, and lowest (or smallest) splanchnic nerves that are formed by preganglionic fibers from the spinal cord which pass through the paravertebral ganglia and then to the celiac ganglia and plexuses and the lumbar splanchnic nerves carry fibers which pass through the lumbar paravertebral ganglia to the mesenteric and hypogastric ganglia. BAMS:spn FMA:5883 GAID:800 MESH:D013153 SCTID:264198001 Wikipedia:Splanchnic_nerves uberon splanchnic nerves visceral nerve UBERON:0003715 splanchnic nerve UBERON:0003715 The major nerves supplying sympathetic innervation to the abdomen, including the greater, lesser, and lowest (or smallest) splanchnic nerves that are formed by preganglionic fibers from the spinal cord which pass through the paravertebral ganglia and then to the celiac ganglia and plexuses and the lumbar splanchnic nerves carry fibers which pass through the lumbar paravertebral ganglia to the mesenteric and hypogastric ganglia. MP:0008318 splanchnic nerves BAMS:spn visceral nerve Wikipedia:Splanchnic_nerves A branch of the vagus nerve that supplies motor function and sensation to the larynx (voice box). It travels within the endoneurium. It is the nerve of the 6th Branchial Arch. recurrent nerve AAO:0010754 FMA:6246 GAID:804 MESH:D012009 SCTID:24227007 VHOG:0001347 Wikipedia:Recurrent_laryngeal_nerve recurrent laryngeal nerve from vagus nerve vagus X nerve recurrent laryngeal branch uberon inferior laryngeal nerve ramus recurrens UBERON:0003716 recurrent laryngeal nerve UBERON:0003716 A branch of the vagus nerve that supplies motor function and sensation to the larynx (voice box). It travels within the endoneurium. It is the nerve of the 6th Branchial Arch. Wikipedia:Recurrent_laryngeal_nerve recurrent nerve Wikipedia:Recurrent_laryngeal_nerve vagus X nerve recurrent laryngeal branch VHOG:0001347 inferior laryngeal nerve GAID:804 ramus recurrens AAO:0010754 The lingual nerve is a branch of the mandibular nerve (CN V3), itself a branch of the trigeminal nerve, which supplies sensory innervation to the tongue. It also carries fibers from the facial nerve, which return taste information from the anterior two thirds of the tongue. BAMS:5lg EMAPA:19168 FMA:53218 GAID:835 MA:0001102 MESH:D008036 SCTID:280260006 Wikipedia:Lingual_nerve lingual branch of trigeminal nerve trigeminal V nerve lingual branch trigeminal nerve lingual branch uberon UBERON:0003721 lingual nerve UBERON:0003721 The lingual nerve is a branch of the mandibular nerve (CN V3), itself a branch of the trigeminal nerve, which supplies sensory innervation to the tongue. It also carries fibers from the facial nerve, which return taste information from the anterior two thirds of the tongue. Wikipedia:Lingual_nerve trigeminal V nerve lingual branch MA:0001102 The twelve spinal nerves on each side of the thorax. They include eleven INTERCOSTAL NERVES and one subcostal nerve. Both sensory and motor, they supply the muscles and skin of the thoracic and abdominal walls. FMA:5860 GAID:857 MESH:D013900 SCTID:360498003 Wikipedia:Thoracic_nerves neuronames:1725 thoracic spinal nerve uberon pectoral nerve UBERON:0003726 thoracic nerve UBERON:0003726 The twelve spinal nerves on each side of the thorax. They include eleven INTERCOSTAL NERVES and one subcostal nerve. Both sensory and motor, they supply the muscles and skin of the thoracic and abdominal walls. MESH:A08.800.800.720.800 thoracic spinal nerve FMA:5860 pectoral nerve GAID:857 The intercostal nerves are the anterior divisions (rami anteriores; ventral divisions) of the thoracic spinal nerves from T1 to T11. Each nerve is connected with the adjoining ganglion of the sympathetic trunk by a gray and a white ramus communicans. The intercostal nerves are distributed chiefly to the thoracic pleura and abdominal peritoneum and differ from the anterior divisions of the other spinal nerves in that each pursues an independent course without plexus formation. The first two nerves supply fibers to the upper limb in addition to their thoracic branches; the next four are limited in their distribution to the parietes of the thorax; the lower five supply the parietes of the thorax and abdomen. The 7th intercostal nerve terminates at the xyphoid process, at the lower end of the sternum. The 10th intercostal nerve terminates at the umbilicus. The twelfth thoracic is distributed to the abdominal wall and groin. [WP,unvetted]. EMAPA:18227 FMA:6028 GAID:858 MESH:D007367 NCIT:C32825 SCTID:279568001 Wikipedia:Intercostal_nerves anterior ramus of thoracic nerve anterior ramus of thoracic spinal nerve ramus anterior, nervus thoracicus thoracic anterior ramus ventral ramus of thoracic spinal nerve uberon UBERON:0003727 intercostal nerve UBERON:0003727 The intercostal nerves are the anterior divisions (rami anteriores; ventral divisions) of the thoracic spinal nerves from T1 to T11. Each nerve is connected with the adjoining ganglion of the sympathetic trunk by a gray and a white ramus communicans. The intercostal nerves are distributed chiefly to the thoracic pleura and abdominal peritoneum and differ from the anterior divisions of the other spinal nerves in that each pursues an independent course without plexus formation. The first two nerves supply fibers to the upper limb in addition to their thoracic branches; the next four are limited in their distribution to the parietes of the thorax; the lower five supply the parietes of the thorax and abdomen. The 7th intercostal nerve terminates at the xyphoid process, at the lower end of the sternum. The 10th intercostal nerve terminates at the umbilicus. The twelfth thoracic is distributed to the abdominal wall and groin. [WP,unvetted]. Wikipedia:Intercostal_nerves anterior ramus of thoracic nerve FMA:6028 anterior ramus of thoracic spinal nerve FMA:6028 ramus anterior, nervus thoracicus FMA:6028 thoracic anterior ramus FMA:6028 ventral ramus of thoracic spinal nerve FMA:6028 A mucous membrane that lines the mouth. BTO:0002860 CALOHA:TS-0716 EMAPA:26937 FMA:59660 GAID:951 MA:0002794 MESH:D009061 NCIT:C77637 Wikipedia:Oral_mucosa mouth mucosa mouth mucous membrane mouth organ mucosa mucosa of mouth mucous membrane of mouth oral mucous membrane oral part of viscerocranial mucosa uberon buccal mucosa mucosal lining of mouth oral mucosa UBERON:0003729 mouth mucosa UBERON:0003729 A mucous membrane that lines the mouth. http://orcid.org/0000-0002-6601-2165 mouth mucosa FMA:59660 mouth mucous membrane OBOL:accepted mouth organ mucosa OBOL:accepted mucosa of mouth OBOL:accepted mucous membrane of mouth FMA:59660 oral part of viscerocranial mucosa FMA:59660 buccal mucosa GAID:951 mucosal lining of mouth MA:0002794 oral mucosa GAID:951 A nerve that is part of a thorax [Automatically generated definition]. MA:0000562 MESH:D013900 SCTID:359876006 nerve of thorax thoracic segment nerve thorax nerve uberon upper body nerve UBERON:0003824 nerve of thoracic segment UBERON:0003824 A nerve that is part of a thorax [Automatically generated definition]. OBOL:automatic nerve of thorax OBOL:automatic thoracic segment nerve MA:0000562 thorax nerve OBOL:automatic upper body nerve MA:0000562 A nerve that is part of an abdominal segment of trunk [Automatically generated definition]. MA:0000528 abdominal segment nerve uberon UBERON:0003825 nerve of abdominal segment UBERON:0003825 A nerve that is part of an abdominal segment of trunk [Automatically generated definition]. OBOL:automatic abdominal segment nerve MA:0000528 A bone that is part of a thorax [Automatically generated definition]. MA:0000559 SCTID:426649006 bone of thorax bone organ of thorax thorax bone thorax bone organ uberon upper body bone UBERON:0003827 thoracic segment bone UBERON:0003827 A bone that is part of a thorax [Automatically generated definition]. OBOL:automatic bone of thorax OBOL:automatic bone organ of thorax OBOL:automatic thorax bone OBOL:automatic thorax bone organ OBOL:automatic upper body bone MA:0000559 A bone that is part of an abdominal segment of trunk [Automatically generated definition]. MA:0000525 abdominal segment of trunk bone abdominal segment of trunk bone organ bone of abdominal segment of trunk bone organ of abdominal segment of trunk uberon UBERON:0003828 abdominal segment bone UBERON:0003828 A bone that is part of an abdominal segment of trunk [Automatically generated definition]. OBOL:automatic abdominal segment of trunk bone OBOL:automatic abdominal segment of trunk bone organ OBOL:automatic bone of abdominal segment of trunk OBOL:automatic bone organ of abdominal segment of trunk OBOL:automatic Any muscle organ that is part of a thorax [Automatically generated definition]. MA:0000561 muscle organ of thorax thorax muscle organ uberon upper body muscle UBERON:0003830 thoracic segment muscle UBERON:0003830 Any muscle organ that is part of a thorax [Automatically generated definition]. OBOL:automatic muscle organ of thorax OBOL:automatic thorax muscle organ OBOL:automatic upper body muscle MA:0000561 Any muscle organ that is part of a respiratory system [Automatically generated definition]. EMAPA:35733 MA:0001828 apparatus respiratorius muscle organ muscle organ of apparatus respiratorius muscle organ of respiratory system respiratory system muscle organ uberon UBERON:0003831 respiratory system muscle UBERON:0003831 Any muscle organ that is part of a respiratory system [Automatically generated definition]. OBOL:automatic apparatus respiratorius muscle organ OBOL:automatic muscle organ of apparatus respiratorius OBOL:automatic muscle organ of respiratory system OBOL:automatic respiratory system muscle organ OBOL:automatic Any muscle organ that is part of a esophagus [Automatically generated definition]. EMAPA:26983 MA:0002682 SCTID:360961009 esophageal muscle esophagus muscle organ gullet muscle organ muscle organ of esophagus muscle organ of gullet muscle organ of oesophagus oesophagus muscle organ uberon UBERON:0003832 esophagus muscle UBERON:0003832 Any muscle organ that is part of a esophagus [Automatically generated definition]. OBOL:automatic esophagus muscle organ OBOL:automatic gullet muscle organ OBOL:automatic muscle organ of esophagus OBOL:automatic muscle organ of gullet OBOL:automatic muscle organ of oesophagus OBOL:automatic oesophagus muscle organ OBOL:automatic A muscle organ that is part of an abdominal segment of trunk [Automatically generated definition]. MA:0000527 abdominal segment of trunk muscle organ muscle organ of abdominal segment of trunk uberon UBERON:0003833 abdominal segment muscle UBERON:0003833 A muscle organ that is part of an abdominal segment of trunk [Automatically generated definition]. OBOL:automatic abdominal segment of trunk muscle organ OBOL:automatic muscle organ of abdominal segment of trunk OBOL:automatic A blood vessel that is part of a thorax [Automatically generated definition]. MA:0000558 blood vessel of thorax thorax blood vessel uberon upper body blood vessel UBERON:0003834 thoracic segment blood vessel UBERON:0003834 A blood vessel that is part of a thorax [Automatically generated definition]. OBOL:automatic blood vessel of thorax OBOL:automatic thorax blood vessel OBOL:automatic upper body blood vessel MA:0000558 A blood vessel that is part of an abdominal segment of trunk [Automatically generated definition]. MA:0000524 abdominal segment of trunk blood vessel blood vessel of abdominal segment of trunk uberon UBERON:0003835 abdominal segment blood vessel UBERON:0003835 A blood vessel that is part of an abdominal segment of trunk [Automatically generated definition]. OBOL:automatic abdominal segment of trunk blood vessel OBOL:automatic blood vessel of abdominal segment of trunk OBOL:automatic A skin of body that is part of an abdominal segment of trunk [Automatically generated definition]. FMA:264898 MA:0000530 abdominal segment of trunk skin skin of abdominal segment of trunk uberon UBERON:0003836 abdominal segment skin UBERON:0003836 A skin of body that is part of an abdominal segment of trunk [Automatically generated definition]. OBOL:automatic abdominal segment of trunk skin OBOL:automatic skin of abdominal segment of trunk OBOL:automatic A portion of connective tissue that is part of a thorax [Automatically generated definition]. MA:0000560 connective tissue of thorax portion of connective tissue of thorax textus connectivus of thorax thorax connective tissue thorax portion of connective tissue thorax textus connectivus uberon upper body connective tissue UBERON:0003837 thoracic segment connective tissue UBERON:0003837 A portion of connective tissue that is part of a thorax [Automatically generated definition]. OBOL:automatic connective tissue of thorax OBOL:automatic portion of connective tissue of thorax OBOL:automatic textus connectivus of thorax OBOL:automatic thorax connective tissue OBOL:automatic thorax portion of connective tissue OBOL:automatic thorax textus connectivus OBOL:automatic upper body connective tissue MA:0000560 A portion of connective tissue that is part of an abdominal segment of trunk [Automatically generated definition]. MA:0000526 abdominal segment of trunk connective tissue abdominal segment of trunk portion of connective tissue abdominal segment of trunk textus connectivus connective tissue of abdominal segment of trunk portion of connective tissue of abdominal segment of trunk textus connectivus of abdominal segment of trunk uberon UBERON:0003838 abdominal segment connective tissue UBERON:0003838 A portion of connective tissue that is part of an abdominal segment of trunk [Automatically generated definition]. OBOL:automatic abdominal segment of trunk connective tissue OBOL:automatic abdominal segment of trunk portion of connective tissue OBOL:automatic abdominal segment of trunk textus connectivus OBOL:automatic connective tissue of abdominal segment of trunk OBOL:automatic portion of connective tissue of abdominal segment of trunk OBOL:automatic textus connectivus of abdominal segment of trunk OBOL:automatic An anatomical space that surrounded_by a neural tube. UBERON:0005713 AAO:0011073 EHDAA2:0001269 EHDAA:2889 EHDAA:914 EMAPA:16167 VHOG:0001119 XAO:0000252 cavity of neural tube lumen of neural tube neural tube neural lumen prosencoel uberon central lumen neural lumen neurocoel UBERON:0003842 neural tube lumen UBERON:0003842 An anatomical space that surrounded_by a neural tube. OBOL:automatic cavity of neural tube https://orcid.org/0000-0002-6601-2165 lumen of neural tube https://orcid.org/0000-0002-6601-2165 neural tube neural lumen EHDAA2:0001269 neural lumen EHDAA:2889 neurocoel VHOG:0001119 In medicine, gonadal vein refers to the blood vessel that carrying blood away from the gonad (testis, ovary) toward the heart. Females : ovarian vein Males : testicular vein [WP,unvetted]. EHDAA2:0000719 EHDAA:8703 SCTID:278192008 VHOG:0001340 Wikipedia:Gonadal_vein gonad vein gonada vein vein of gonad vein of gonada uberon UBERON:0003848 gonadal vein UBERON:0003848 In medicine, gonadal vein refers to the blood vessel that carrying blood away from the gonad (testis, ovary) toward the heart. Females : ovarian vein Males : testicular vein [WP,unvetted]. Wikipedia:Gonadal_vein gonad vein OBOL:automatic gonada vein OBOL:automatic vein of gonad OBOL:automatic vein of gonada OBOL:automatic A neural crest that has_potential_to_developmentally_contribute_to a midbrain. EFO:0003591 EHDAA2:0001101 EHDAA:360 TAO:0000935 VHOG:0000796 ZFA:0000935 mesencephalic neural crest neural crest midbrain uberon UBERON:0003849 mesencephalic neural crest UBERON:0003849 A neural crest that has_potential_to_developmentally_contribute_to a midbrain. OBOL:automatic mesencephalic neural crest ZFA:0000935 neural crest midbrain ZFA:0000935 A neural crest that has_potential_to_developmentally_contribute_to a telencephalon. EFO:0003574 RETIRED_EHDAA2:0001991 TAO:0000812 VHOG:0000799 ZFA:0000812 neural crest telencephalon uberon UBERON:0003850 telencephalon neural crest UBERON:0003850 A neural crest that has_potential_to_developmentally_contribute_to a telencephalon. OBOL:automatic neural crest telencephalon ZFA:0000812 A neural crest that has_potential_to_developmentally_contribute_to a diencephalon. EFO:0003573 EHDAA2:0000603 EMAPA:16518 TAO:0000811 VHOG:0000798 ZFA:0000811 diencephalic neural crest future diencephalon neural crest neural crest diencephalon neural crest of future diencephalon uberon UBERON:0003851 diencephalon neural crest UBERON:0003851 A neural crest that has_potential_to_developmentally_contribute_to a diencephalon. OBOL:automatic diencephalic neural crest ZFA:0000811 future diencephalon neural crest EHDAA2:0000603 neural crest diencephalon ZFA:0000811 neural crest of future diencephalon EMAPA:16518 A neural crest that has_potential_to_developmentally_contribute_to a hindbrain. EHDAA2:0001628 EHDAA:362 EMAPA:35747 TAO:0007063 VHOG:0001210 ZFA:0007063 neural crest hindbrain rhombencephalic neural crest uberon rhombomere neural crest UBERON:0003852 rhombencephalon neural crest UBERON:0003852 A neural crest that has_potential_to_developmentally_contribute_to a hindbrain. OBOL:automatic neural crest hindbrain ZFA:0007063 rhombencephalic neural crest ZFA:0007063 rhombomere neural crest EMAPA:35747 A neural crest that has_potential_to_developmentally_contribute_to a spinal cord. EHDAA:696 EMAPA:16163 EMAPA:16881 VHOG:0001006 neural crest spinal cord uberon spinal neural crest UBERON:0003853 spinal cord neural crest UBERON:0003853 A neural crest that has_potential_to_developmentally_contribute_to a spinal cord. OBOL:automatic neural crest spinal cord VHOG:0001006 spinal neural crest VHOG:0001006 A neural plate that develops_from a future spinal cord. FMA:312957 TAO:0007021 VHOG:0000439 ZFA:0007021 neural plate of spinal cord uberon UBERON:0003854 spinal cord neural plate UBERON:0003854 A neural plate that develops_from a future spinal cord. OBOL:automatic neural plate of spinal cord OBOL:automatic Mesenchyme that is part of a developing gonad [Automatically generated definition]. EHDAA:5012 EMAPA:16858 EMAPA:17385 VHOG:0001090 gonada mesenchyme mesenchyme of gonad mesenchyme of gonada uberon UBERON:0003855 gonad mesenchyme UBERON:0003855 Mesenchyme that is part of a developing gonad [Automatically generated definition]. OBOL:automatic gonada mesenchyme OBOL:automatic mesenchyme of gonad OBOL:automatic mesenchyme of gonada OBOL:automatic A presumptive structure that has the potential to develop into a ganglion. uberon UBERON:0003869 presumptive ganglion UBERON:0003869 A presumptive structure that has the potential to develop into a ganglion. OBOL:automatic An anatomical cavity that has the potential to develop into a coelemic cavity lumen. future coelomic cavity lumen uberon body cavity precursor UBERON:0003886 future coelemic cavity lumen UBERON:0003886 An anatomical cavity that has the potential to develop into a coelemic cavity lumen. OBOL:automatic The part of the coelom in the embryo between the somatopleuric and splanchnopleuric mesoderm; the principal body cavities of the trunk (thoracic, abdominal, and pelvic) arise from this embryonic part of the coelom. EHDAA:251 EMAPA:16088 NCIT:C34195 VHOG:0000316 Wikipedia:Intraembryonic_coelom somatic coelom uberon UBERON:0003887 intraembryonic coelom UBERON:0003887 The part of the coelom in the embryo between the somatopleuric and splanchnopleuric mesoderm; the principal body cavities of the trunk (thoracic, abdominal, and pelvic) arise from this embryonic part of the coelom. MGI:anna MP:0012187 somatic coelom Wikipedia:Intraembryonic_coelom Connective, non-functional supportive framework of a biological cell, tissue, or organ. Contrast with parenchyma. FMA:81494 NCIT:C67387 uberon stromal connective tissue UBERON:0003891 stroma UBERON:0003891 Connective, non-functional supportive framework of a biological cell, tissue, or organ. Contrast with parenchyma. http://orcid.org/0000-0002-6601-2165 One of the skeletal muscles of the head and neck, spine, and ribs. EHDAA:5982 EMAPA:18167 MA:0003153 RETIRED_EHDAA2:0000160 TAO:0001954 uberon UBERON:0003897 axial muscle UBERON:0003897 One of the skeletal muscles of the head and neck, spine, and ribs. HP:0003327 A portion of skeletal muscle tissue in the trunk. SCTID:244848007 skeletal muscle of torso skeletal muscle tissue of torso skeletal muscle tissue of trunk torso skeletal muscle torso skeletal muscle tissue trunk skeletal muscle trunk skeletal muscle tissue uberon UBERON:0003898 skeletal muscle tissue of trunk UBERON:0003898 A portion of skeletal muscle tissue in the trunk. http://orcid.org/0000-0002-6601-2165 skeletal muscle of torso OBOL:automatic skeletal muscle tissue of torso OBOL:automatic skeletal muscle tissue of trunk OBOL:automatic torso skeletal muscle OBOL:automatic torso skeletal muscle tissue OBOL:automatic trunk skeletal muscle OBOL:automatic trunk skeletal muscle tissue OBOL:automatic The part of the retina that contains neurons and photoreceptor cells[GO]. AAO:0011095 BTO:0000929 CALOHA:TS-0685 EHDAA2:0001253 EHDAA:4763 EMAPA:17171 EMAPA:18590 FMA:58628 MA:0000277 NCIT:C33166 TAO:0000046 VHOG:0000535 XAO:0003216 ZFA:0000046 neural layer of retina neural retina neuroretina stratum nervosum (retina) uberon neural retinal epithelium UBERON:0003902 retinal neural layer UBERON:0003902 The part of the retina that contains neurons and photoreceptor cells[GO]. GO:0003407 neural layer of retina FMA:58628 neural retina XAO:0003216 ZFA:0000046 neuroretina ZFA:0000046 stratum nervosum (retina) FMA:58628 neural retinal epithelium MA:000027 Small blood vessel similar to a capillary but with a fenestrated endothelium. Sinusoids are found in the liver, lymphoid tissue, endocrine organs, and hematopoietic organs such as the bone marrow and the spleen. Sinusoids found within terminal villi of the placenta are not comparable to these; they possess a continuous endothelium and complete basal lamina[WP]. FMA:63131 SCTID:340163004 TAO:0005261 Wikipedia:Sinusoid_(blood_vessel) ZFA:0005261 sinusoidal blood vessel sinusoidal blood vessel endothelium uberon endothelium of irregular blood filled space sinusoidal capillary sinusoidal endothelium UBERON:0003909 sinusoid UBERON:0003909 Small blood vessel similar to a capillary but with a fenestrated endothelium. Sinusoids are found in the liver, lymphoid tissue, endocrine organs, and hematopoietic organs such as the bone marrow and the spleen. Sinusoids found within terminal villi of the placenta are not comparable to these; they possess a continuous endothelium and complete basal lamina[WP]. Wikipedia:Sinusoid_(blood_vessel) sinusoidal blood vessel endothelium ZFA:0005261 sinusoidal capillary http://www.medilexicon.com/medicaldictionary.php?t=13986 Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system. AEO:0000114 EHDAA2:0003114 epithelial or endothelial tube uberon UBERON:0003914 epithelial tube UBERON:0003914 Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system. GO:0060562 PMID:12526790 Any endothelium that has the quality of being cylindrical [Automatically generated definition]. uberon UBERON:0003915 endothelial tube UBERON:0003915 Any endothelium that has the quality of being cylindrical [Automatically generated definition]. OBOL:automatic A blood vessel that carries blood from the capillaries toward the heart. EMAPA:35932 FMA:86188 MA:0000066 segment of venous tree organ venous tree organ segment uberon UBERON:0003920 Compare to: vein venous blood vessel UBERON:0003920 A blood vessel that carries blood from the capillaries toward the heart. http://www.thefreedictionary.com/venous+blood+vessel segment of venous tree organ FMA:86188 venous tree organ segment FMA:86188 A duct that is part of a digestive system [Automatically generated definition]. TAO:0005162 ZFA:0005162 duct of digestive system duct of gastrointestinal system gastrointestinal system duct uberon UBERON:0003928 digestive system duct UBERON:0003928 A duct that is part of a digestive system [Automatically generated definition]. OBOL:automatic duct of digestive system OBOL:automatic duct of gastrointestinal system OBOL:automatic gastrointestinal system duct OBOL:automatic An epithelium that lines the lumen of the digestive tract. BTO:0000956 EHDAA2:0004567 EMAPA:32928 MA:0003201 NCIT:C12963 TAO:0005123 XAO:0003200 ZFA:0005123 digestive tract epithelial tissue epithelial tissue of digestive tract epithelial tissue of gut epithelium of digestive tract epithelium of gut gut epithelial tissue gut epithelium uberon alimentary tract epithelium UBERON:0003929 digestive tract epithelium UBERON:0003929 An epithelium that lines the lumen of the digestive tract. http://orcid.org/0000-0002-6601-2165 digestive tract epithelial tissue OBOL:automatic epithelial tissue of digestive tract OBOL:automatic epithelial tissue of gut OBOL:automatic epithelium of digestive tract OBOL:automatic epithelium of gut OBOL:automatic gut epithelial tissue OBOL:automatic gut epithelium EHDAA2:0004567 MA:0003201 ZFA:0005123 alimentary tract epithelium OBOL:automatic White matter that is part of a diencephalon [Automatically generated definition]. UBERON:0023148 BIRNLEX:1678 FMA:83931 TAO:0000338 ZFA:0000338 diencephalic tract/commissure predominantly white regional part of diencephalon white matter of diencephalon uberon UBERON:0003931 diencephalic white matter UBERON:0003931 White matter that is part of a diencephalon [Automatically generated definition]. OBOL:automatic diencephalic tract/commissure ZFA:0000338 predominantly white regional part of diencephalon BIRNLEX:1678 white matter of diencephalon FMA:83931 A cartilage element of chondrocranium. Example: neurocranial trabecula. EFO:0003690 TAO:0001461 ZFA:0001461 cartilage of chondrocranium cartilaginous element of chondrocranium chondrocranium cartilage neurocranium cartilage uberon UBERON:0003932 cartilage element of chondrocranium UBERON:0003932 A cartilage element of chondrocranium. Example: neurocranial trabecula. https://orcid.org/0000-0002-6601-2165 cartilage of chondrocranium OBOL:accepted cartilaginous element of chondrocranium OBOL:accepted chondrocranium cartilage ZFA:0001461 neurocranium cartilage ZFA:0001461 A cartilage element that is part of the cranial skeleton. TAO:0001458 ZFA:0001458 cartilage of cranium cranium cartilage uberon UBERON:0003933 cranial cartilage UBERON:0003933 A cartilage element that is part of the cranial skeleton. ZFA:0001458 https://orcid.org/0000-0002-6601-2165 cartilage of cranium OBOL:automatic cranium cartilage OBOL:automatic Any of the organized aggregations of cells that function as secretory or excretory organs and are associated with reproduction. MA:0001751 genitalia gland gland of genitalia gland of reproductive system reproductive gland reproductive system gland sex gland uberon UBERON:0003937 reproductive gland UBERON:0003937 Any of the organized aggregations of cells that function as secretory or excretory organs and are associated with reproduction. MP:0000653 genitalia gland OBOL:automatic gland of genitalia MP:0000653 gland of reproductive system OBOL:automatic reproductive gland MA:0001751 reproductive system gland OBOL:automatic sex gland MP:0000653 The sensory system for the sense of touch and pain. UBERON:0014511 NLXANAT:090818 Wikipedia:Somatosensory_system neuronames:2887 somatic sensory system system for detection of somatic senses uberon UBERON:0003942 somatosensory system UBERON:0003942 The sensory system for the sense of touch and pain. NLXANAT:090818 The anterior segment of the lamellated connective tissue layer of the cornea. anterior stroma cornea anterior stroma uberon UBERON:0003952 anterior stroma of cornea UBERON:0003952 The anterior segment of the lamellated connective tissue layer of the cornea. MP:0003093 anterior stroma MP:0003093 cornea anterior stroma MP:0003093 The posterior segment of the lamellated connective tissue layer of the cornea. posterior stroma cornea posterior stroma uberon UBERON:0003953 posterior stroma of cornea UBERON:0003953 The posterior segment of the lamellated connective tissue layer of the cornea. MP:0003094 posterior stroma MP:0003094 cornea posterior stroma MP:0003094 The slender connective tissue fiber in the extracellular matrix of skin tissue that is composed of microfibrils and amorphous elastin and is characterized by great elasticity. cutaneous elastic fiber dermal elastic fiber uberon UBERON:0003967 cutaneous elastic tissue UBERON:0003967 The slender connective tissue fiber in the extracellular matrix of skin tissue that is composed of microfibrils and amorphous elastin and is characterized by great elasticity. MP:0008418 cutaneous elastic fiber MP:0008418 dermal elastic fiber MP:0008418 The internal feminine genital organs, including the ovaries, uterine tubes, uterus, uterine cervix, and vagina. BTO:0003099 FMA:45654 SCTID:303518005 female internal genitalia internal female genital organ internal genitalia of female reproductive system uberon organa genitalia feminina interna UBERON:0003975 TODO: Relabel. Make distinct organ class. See https://github.com/obophenotype/uberon/issues/547 internal female genitalia UBERON:0003975 The internal feminine genital organs, including the ovaries, uterine tubes, uterus, uterine cervix, and vagina. MP:0009209 female internal genitalia FMA:45654 internal female genital organ BTO:0003099 internal genitalia of female reproductive system OBOL:automatic organa genitalia feminina interna BTO:0003099 The connection between the embryo proper and extraembryonic tissues. uberon UBERON:0004015 embryonic-extraembryonic boundary UBERON:0004015 The connection between the embryo proper and extraembryonic tissues. MP:0003890 A transitional population of migrating mesenchymal cells that derive from somites and that will become dermal cells. AAO:0011028 AEO:0001017 EHDAA2_RETIRED:0003428 EHDAA:1719 EHDAA:1725 EHDAA:1731 EHDAA:1737 EMAPA:32838 FMA:295656 NCIT:C61572 Wikipedia:Dermatome_(embryology) XAO:0000220 cutis plate dermatomal mesenchyme uberon epimere mesoderm UBERON:0004016 dermatome UBERON:0004016 A transitional population of migrating mesenchymal cells that derive from somites and that will become dermal cells. AEO:0001017 AEO:JB cutis plate Wikipedia:Cutis_plate dermatomal mesenchyme Wikipedia:Cutis_plate The single layer of epithelial cells that lines the early neural tube and develops into the nervous system and into the neural crest cells. germinal neuroepithelial layer germinal neuroepithelium original neural tube uberon UBERON:0004022 germinal neuroepithelium UBERON:0004022 The single layer of epithelial cells that lines the early neural tube and develops into the nervous system and into the neural crest cells. MP:0004261 http://www.ncbi.nlm.nih.gov/books/NBK10047 germinal neuroepithelial layer http://orcid.org/0000-0002-6601-2165 germinal neuroepithelium NCBIBook:NBK10047 original neural tube NCBIBook:NBK10047 The transient outer neural tube region that contains the first generated post-mitotic neurons that receive synaptic input from thalamic axons and in turn project axons to the developing cortical plate. DHBA:10522 EMAPA:32703 PBA:294021932 Wikipedia:Subplate https://upload.wikimedia.org/wikipedia/commons/thumb/a/ac/Corticogenesis_in_a_wild-type_mouse_with_captions_in_english_copy.png/360px-Corticogenesis_in_a_wild-type_mouse_with_captions_in_english_copy.png neuronames:3233 cerebral cortex subplate subplate subplate zone uberon UBERON:0004035 cortical subplate UBERON:0004035 The transient outer neural tube region that contains the first generated post-mitotic neurons that receive synaptic input from thalamic axons and in turn project axons to the developing cortical plate. MP:0008440 Wikipedia:Subplate https://github.com/obophenotype/mouse-anatomy-ontology/issues/1 cerebral cortex subplate EMAPA:32833 subplate zone DHBA:10522 The region of the developing mammalian cortex that extends between the ventricular zone and the cortical plate (CP); normally, the IZ is a region of tangential migration of cells, and at midgestation, the lower part of the IZ develops into the subventricular zone. EMAPA:17545 EMAPA:32712 uberon cerebral cortex mantle layer cerebral cortex mantle zone cortical mantle layer UBERON:0004040 cortical intermediate zone UBERON:0004040 The region of the developing mammalian cortex that extends between the ventricular zone and the cortical plate (CP); normally, the IZ is a region of tangential migration of cells, and at midgestation, the lower part of the IZ develops into the subventricular zone. MP:0008457 cerebral cortex mantle layer EMAPA:17545 The layer of undifferentiated, proliferating cells that line the neural tube lumen that is the immediate transformation of the germinal neuroepithelium. ependymal layer EMAPA:17152 EMAPA:35362 EMAPA_RETIRED:16783 MA:0003193 neural tube ependymal layer neural tube ventricular germinal zone neural tube ventricular zone neural tube ependymal zone uberon UBERON:0004060 neural tube ventricular layer UBERON:0004060 The layer of undifferentiated, proliferating cells that line the neural tube lumen that is the immediate transformation of the germinal neuroepithelium. MP:0009689 http://www.ncbi.nlm.nih.gov/books/NBK10047 ependymal layer NCBIBook:NBK10047 neural tube ependymal layer NCBIBook:NBK10047 neural tube ventricular germinal zone NCBIBook:NBK10047 neural tube ventricular zone MP:0009689 neural tube ependymal zone MP:0009689 The layer of glia and differentiating neurons that forms as a second layer around the germinal neuroepithium; as this develops it comes to lie between the ventricular and marginal layers and includes the basal and alar plates. Develops into neurons and glia forming a gray matter layer. EMAPA:17148 EMAPA:35360 neuronames:1367 neural tube intermediate zone uberon future brain marginal layer UBERON:0004061 neural tube mantle layer UBERON:0004061 The layer of glia and differentiating neurons that forms as a second layer around the germinal neuroepithium; as this develops it comes to lie between the ventricular and marginal layers and includes the basal and alar plates. Develops into neurons and glia forming a gray matter layer. MP:0009690 http://www.ncbi.nlm.nih.gov/books/NBK10047 neural tube intermediate zone MP:0009690 http://www.ncbi.nlm.nih.gov/books/NBK10047 future brain marginal layer EMAPA:35360 The outermost layer of the neural tube that consists of axons from the developing mantle layer and will form the white matter. EMAPA:17151 neuronames:1368 neural tube marginal zone uberon brain marginal zone UBERON:0004062 neural tube marginal layer UBERON:0004062 The outermost layer of the neural tube that consists of axons from the developing mantle layer and will form the white matter. MP:0009691 http://www.ncbi.nlm.nih.gov/books/NBK10047 neural tube marginal zone MP:0009691 The region of the mantle layer of the neural tube that lies ventral to the sulcus limitans and contains primarily motor neurons and interneurons. AAO:0010561 EFO:0001904 NCIT:C34111 Wikipedia:Basal_plate_(neural_tube) neuronames:1372 basal plate basal plate of neural tube spinal cord basal plate uberon motor part of neural tube ventral part of neural tube UBERON:0004064 neural tube basal plate UBERON:0004064 The region of the mantle layer of the neural tube that lies ventral to the sulcus limitans and contains primarily motor neurons and interneurons. MP:0009693 Wikipedia:Basal_plate_(neural_tube) http://www.ncbi.nlm.nih.gov/books/NBK10047 basal plate of neural tube Wikipedia:Basal_plate_(neural_tube) spinal cord basal plate MP:0009693 Any of the veins that carries deoxygenated blood from a part of the body into the right atrium of the heart. AAO:0010215 BTO:0001438 EMAPA:18415 FMA:321896 GAID:547 MA:0000068 MESH:D014684 NCIT:C12817 SCTID:244405007 Wikipedia:Venae_cavae uberon caval vein UBERON:0004087 vena cava UBERON:0004087 Any of the veins that carries deoxygenated blood from a part of the body into the right atrium of the heart. Wikipedia:Venae_cavae http://orcid.org/0000-0002-6601-2165 The subdivision of the face that includes the eye (eyeball plus adnexa such as eyelids) and the orbit of the skull and associated parts of the face such as the eyebrows, if present. FMA:260119 content of orbital part of eye eye region orbital part of face uberon ocular and peri-ocular region ocular region orbital content orbital part of eye UBERON:0004088 orbital region UBERON:0004088 The subdivision of the face that includes the eye (eyeball plus adnexa such as eyelids) and the orbit of the skull and associated parts of the face such as the eyebrows, if present. http://orcid.org/0000-0002-6601-2165 content of orbital part of eye FMA:260119 eye region http://orcid.org/0000-0002-6601-2165 orbital part of face http://orcid.org/0000-0002-6601-2165 orbital content FMA:260119 orbital part of eye FMA:72951 2 Any tube, opening or passage that connects two distinct anatomical spaces. AEO:0000080 EHDAA2:0003080 FMA:242873 SCTID:346902003 Wikipedia:Foramen foramen uberon opening ostium UBERON:0004111 anatomical conduit UBERON:0004111 Any tube, opening or passage that connects two distinct anatomical spaces. http://orcid.org/0000-0002-6601-2165 foramen EHDAA2:0003080 An internal pocketing of pharyngeal endoderm that contacts a region of ectoderm (a pharyngeal cleft) and interdigitates in the anterior and posterior directions with the pharyngeal arches. AAO:0011113 EFO:0003627 EHDAA:1086 EHDAA:1669 EHDAA:579 EHDAA:617 EMAPA:32752 FMA:293063 NCIT:C34252 SCTID:34674002 TAO:0001106 VHOG:0001203 Wikipedia:Pharyngeal_pouch_(embryology) XAO:0000282 ZFA:0001106 branchial pouch uberon pharyngeal pouches visceral pouches UBERON:0004117 The pouches are polarized structures. For example, whereas the rostral half of each pouch expresses Bmp-7, the caudal half expresses FGF-8 and the dorsal aspect of each pouch is marked via its expression of Pax-1. each pouch has an individual sense of identity. Shh expression is a prominent early feature of the caudal endoderm of the second arch, and individual pouches mark the anterior limits of expression of Hox genes within the pharyngeal endoderm; Hox-a2 has a rostral boundary at the second pouch, Hox-a3 at the third pouch and Hox-a4 at the most caudal pouch[PMID:16313389] pharyngeal pouch UBERON:0004117 An internal pocketing of pharyngeal endoderm that contacts a region of ectoderm (a pharyngeal cleft) and interdigitates in the anterior and posterior directions with the pharyngeal arches. PMID:23020903 ZFA:0001106 http://orcid.org/0000-0002-6601-2165 branchial pouch Wikipedia:Branchial_pouch pharyngeal pouches VHOG:0001203 visceral pouches VHOG:0001203 A vasculature that is part of a iris [Automatically generated definition]. ZFA:0005568 iris blood vessels iris vascular network iris vasculature vascular network of iris uberon UBERON:0004118 vasculature of iris UBERON:0004118 A vasculature that is part of a iris [Automatically generated definition]. OBOL:automatic iris blood vessels ZFA:0005568 iris vascular network OBOL:automatic vascular network of iris OBOL:automatic An anatomical structure that develops (entirely or partially) from the endoderm. uberon UBERON:0004119 endoderm-derived structure UBERON:0004119 An anatomical structure that develops (entirely or partially) from the endoderm. https://orcid.org/0000-0002-6601-2165 An anatomical structure that develops (entirely or partially) from the mesoderm. mesodermal derivative uberon UBERON:0004120 mesoderm-derived structure UBERON:0004120 An anatomical structure that develops (entirely or partially) from the mesoderm. https://orcid.org/0000-0002-6601-2165 mesodermal derivative FBbt:00025998 An anatomical structure that develops (entirely or partially) from the ectoderm. ectodermal deriviative uberon UBERON:0004121 ectoderm-derived structure UBERON:0004121 An anatomical structure that develops (entirely or partially) from the ectoderm. https://orcid.org/0000-0002-6601-2165 ectodermal deriviative FBbt:00025990 The optic vesicle is the evagination of neurectoderm that precedes formation of the optic cup[GO]. Portion of tissue that is comprised of neuroepitheium which has pinched off from the anterior neural keel and will form the optic cup[ZFA]. AAO:0011039 EHDAA2:0001320 EMAPA:16540 FMA:293357 NCIT:C34236 SCTID:362864008 TAO:0000050 VHOG:0000165 Wikipedia:Optic_vesicles XAO:0000228 ZFA:0000050 uberon evagination eye vesicle ocular vesicle UBERON:0004128 Genes: Six3, Pax6, Rx1 are expressed together in the tip of the neural plate [ISBN:9780878932504 "Developmental Biology"]. Development notes: During subsequent develop- ment, the optic vesicle invaginates and becomes a two-layered structure with an inner neural retina and outer retinal pigment epithelium. As soon as the developing optic vesicle makes contact with the overlying ectoderm, it induces the ectoderm to thicken and form the lens placode [PMID:16496288] optic vesicle UBERON:0004128 The optic vesicle is the evagination of neurectoderm that precedes formation of the optic cup[GO]. Portion of tissue that is comprised of neuroepitheium which has pinched off from the anterior neural keel and will form the optic cup[ZFA]. GO:0003404 Wikipedia:Optic_vesicles eye vesicle XAO:0000228 ocular vesicle VHOG:0000165 Missing definition for term UBERON:0004133. Please replace it using linked reference. salivary nucleus uberon UBERON:0004133 salivatory nucleus UBERON:0004133 Missing definition for term UBERON:0004133. Please replace it using linked reference. GO:0021751 salivary nucleus GO:0021751 The first recognizable structure derived from the heart field. EHDAA2:0000215 EMAPA:16106 VHOG:0000975 myocardial plate uberon cardiac crescent cardiogenic crescent heart rudiment UBERON:0004139 cardiogenic plate UBERON:0004139 The first recognizable structure derived from the heart field. GO:0003142 myocardial plate EHDAA2:0000215 cardiac crescent EMAPA:16106 cardiogenic crescent GO:0003142 A specific region of the lateral mesoderm that will form the primary beating heart tube. In mammals the primary heart field gives rise to the left ventricle. XAO:0004185 first heart field primary heart field uberon heart field UBERON:0004140 primary heart field UBERON:0004140 A specific region of the lateral mesoderm that will form the primary beating heart tube. In mammals the primary heart field gives rise to the left ventricle. GO:0003138 GOC:mtg_heart GOC:rl first heart field XAO:0004185 primary heart field PMID:17276708 XAO:0004185 heart field XAO:0004185 An epithelial tube that will give rise to the mature heart. AAO:0010411 EFO:0003526 EMAPA:32685 NCIT:C34161 TAO:0000360 XAO:0000337 ZFA:0000360 embryonic heart tube endocardial heart tube endocardial tube uberon UBERON:0004141 heart tube UBERON:0004141 An epithelial tube that will give rise to the mature heart. GO:0003143 GOC:mtg_heart embryonic heart tube GO:0003143 endocardial heart tube MP:0012700 endocardial tube XAO:0000337 The outflow tract septum is a partition in the outflow tract. XAO:0004141 uberon UBERON:0004142 outflow tract septum UBERON:0004142 The outflow tract septum is a partition in the outflow tract. GO:0003148 The outflow tract is the portion of the heart through which blood flows into the arteries. EHDAA2:0001351 EHDAA:464 EHDAA:798 EMAPA:16346 MA:0000100 VHOG:0000670 XAO:0004139 cardiac outflow tract heart outflow tract uberon arterial (outflow) pole UBERON:0004145 outflow tract UBERON:0004145 The outflow tract is the portion of the heart through which blood flows into the arteries. GO:0003151 cardiac outflow tract PMID:20735616 arterial (outflow) pole PMID:20735616 The His-Purkinje system receives signals from the AV node and is composed of the fibers that regulate cardiac muscle contraction in the ventricles. His-Purkinji network VCS ventricular conduction system uberon UBERON:0004146 His-Purkinje system UBERON:0004146 The His-Purkinje system receives signals from the AV node and is composed of the fibers that regulate cardiac muscle contraction in the ventricles. GO:0003164 https://github.com/geneontology/go-ontology/issues/12451 Vein of heart that drains the myocardium. EHDAA2:0004507 FMA:12846 NCIT:C12878 NCIT:C12882 SCTID:277726009 Wikipedia:Coronary_circulation ZFA:0005814 galen:CoronaryVein cardiac vein coronary vein heart vein vein of heart uberon coronary vein UBERON:0004148 cardiac vein UBERON:0004148 Vein of heart that drains the myocardium. http://orcid.org/0000-0002-6601-2165 cardiac vein FMA:12846 coronary vein ZFA:0005814 heart vein OBOL:automatic vein of heart OBOL:automatic coronary vein Wikipedia:Coronary_circulation A cardiac chamber surrounds an enclosed cavity within the heart. FMA:7095 SCTID:276456008 chamber of heart heart chamber uberon UBERON:0004151 generic enough to cover FBbt:00003156 heart chamber but this is a cavity. GO defines it as the cavity. TODO - move subclasses. Note this also includes sinus venosus cardiac chamber UBERON:0004151 A cardiac chamber surrounds an enclosed cavity within the heart. GO:0003205 An embryonic group of progenitor cells that forms from an outpouching of the septum transversum near the venous pole of the heart and gives rise to the epicardium. EMAPA:36025 ZFA:0005808 proepicardial cluster proepicardial organ uberon UBERON:0004160 proepicardium UBERON:0004160 An embryonic group of progenitor cells that forms from an outpouching of the septum transversum near the venous pole of the heart and gives rise to the epicardium. GO:0003342 http://en.wiktionary.org/wiki/proepicardium proepicardial cluster ZFA:0005808 proepicardial organ ZFIN:ZDB-PUB-080218-16 A thick plate of mesodermal tissue that occupies the space between the thoracic cavity and yolk stalk in the early embryo, forming a transverse partition partially separating the coelomic cavity into thoracic and abdominal portions. It gives rise to the central tendon of the diaphragm[VHOG]. EHDAA2:0001829 EHDAA:736 EMAPA:16318 FMA:295593 NCIT:C34296 SCTID:308819008 VHOG:0000019 Wikipedia:Septum_transversum transverse septum uberon UBERON:0004161 septum transversum UBERON:0004161 A thick plate of mesodermal tissue that occupies the space between the thoracic cavity and yolk stalk in the early embryo, forming a transverse partition partially separating the coelomic cavity into thoracic and abdominal portions. It gives rise to the central tendon of the diaphragm[VHOG]. VHOG:0000019 Wikipedia:Septum_transversum transverse septum https://orcid.org/0000-0002-6601-2165 The internal genitalia are the internal sex organs such as the uterine tube, the uterus and the vagina in female mammals, and the testis, seminal vesicle, ejaculatory duct and prostate in male mammals. FMA:45652 internal genitalia internal genitals uberon internal reproductive organ internal sex organ UBERON:0004175 TODO: make a subdivision of reproductive system. Relabel. See https://github.com/obophenotype/uberon/issues/547 internal genitalia UBERON:0004175 The internal genitalia are the internal sex organs such as the uterine tube, the uterus and the vagina in female mammals, and the testis, seminal vesicle, ejaculatory duct and prostate in male mammals. GO:0035260 The external genitalia are the outer sex organs, such as the penis or vulva in mammals. FMA:45643 SCTID:362207005 external genitalia uberon external reproductive organ external sex organ UBERON:0004176 TODO: make a subdivision of reproductive system. Relabel. See https://github.com/obophenotype/uberon/issues/547 external genitalia UBERON:0004176 The external genitalia are the outer sex organs, such as the penis or vulva in mammals. GO:0035261 Organ that is part of the hematopoietic system. BTO:0004605 FMA:7143 MA:0000747 SCTID:361338006 haematological system organ haemopoietic system organ hematopoeitic organ hematopoietic system organ organ of haematological system organ of haemopoietic system organ of hematopoietic system organ of organa haemopoietica organa haemopoietica organ hematopoeitic or lymphoid organ lymph organ lymphoid organ uberon UBERON:0004177 hemopoietic organ UBERON:0004177 Organ that is part of the hematopoietic system. GOC:Obol haematological system organ OBOL:automatic haemopoietic system organ OBOL:automatic hematopoietic system organ OBOL:automatic organ of haematological system OBOL:automatic organ of haemopoietic system OBOL:automatic organ of hematopoietic system OBOL:automatic organ of organa haemopoietica OBOL:automatic organa haemopoietica organ OBOL:automatic lymph organ MA:0000747 lymphoid organ BTO:0004605 FMA:7143 The nonstriated, involuntary muscle tissue located in the wall of the aorta. BTO:0001685 CALOHA:TS-0048 EFO:0002775 EMAPA:35135 MA:0000702 NCIT:C49191 aorta non-striated muscle aorta smooth muscle aortic smooth muscle uberon UBERON:0004178 aorta smooth muscle tissue UBERON:0004178 The nonstriated, involuntary muscle tissue located in the wall of the aorta. MGI:csmith MP:0009865 aorta non-striated muscle OBOL:automatic aorta smooth muscle OBOL:automatic aortic smooth muscle BTO:0001685 A portions of the gut that is derived from endoderm. EMAPA:32930 endodermal gut gut endoderm uberon UBERON:0004185 endodermal part of digestive tract UBERON:0004185 A portions of the gut that is derived from endoderm. GO:0061031 gut endoderm EMAPA:32930 A nerve that is part of a back [Automatically generated definition]. MA:0000497 nerve of back uberon UBERON:0004215 back nerve UBERON:0004215 A nerve that is part of a back [Automatically generated definition]. OBOL:automatic nerve of back OBOL:automatic A portion of smooth muscle tissue that is part of a stomach [Automatically generated definition]. BTO:0001818 EMAPA:35823 MA:0001627 involuntary muscle of stomach involuntary muscle of ventriculus non-striated muscle of stomach non-striated muscle of ventriculus smooth muscle of stomach smooth muscle of ventriculus smooth muscle tissue of stomach smooth muscle tissue of ventriculus stomach involuntary muscle stomach non-striated muscle stomach smooth muscle tissue ventriculus involuntary muscle ventriculus non-striated muscle ventriculus smooth muscle ventriculus smooth muscle tissue uberon gastric muscle gastric smooth muscle stomach muscle UBERON:0004222 stomach smooth muscle UBERON:0004222 A portion of smooth muscle tissue that is part of a stomach [Automatically generated definition]. OBOL:automatic involuntary muscle of stomach OBOL:automatic involuntary muscle of ventriculus OBOL:automatic non-striated muscle of stomach OBOL:automatic non-striated muscle of ventriculus OBOL:automatic smooth muscle of stomach OBOL:automatic smooth muscle of ventriculus OBOL:automatic smooth muscle tissue of stomach OBOL:automatic smooth muscle tissue of ventriculus OBOL:automatic stomach involuntary muscle OBOL:automatic stomach non-striated muscle OBOL:automatic stomach smooth muscle tissue OBOL:automatic ventriculus involuntary muscle OBOL:automatic ventriculus non-striated muscle OBOL:automatic ventriculus smooth muscle OBOL:automatic ventriculus smooth muscle tissue OBOL:automatic gastric muscle BTO:0001818 gastric smooth muscle MA:0001627 stomach muscle BTO:0001818 A portion of smooth muscle tissue that is part of a respiratory system [Automatically generated definition]. BTO:0001660 EMAPA:35734 MA:0001830 respiratory smooth muscle smooth muscle of respiratory system uberon airway smooth muscle airway smooth muscle cell UBERON:0004225 respiratory system smooth muscle UBERON:0004225 A portion of smooth muscle tissue that is part of a respiratory system [Automatically generated definition]. OBOL:automatic respiratory smooth muscle BTO:0001660 smooth muscle of respiratory system OBOL:automatic airway smooth muscle BTO:0001660 airway smooth muscle cell BTO:0001660 A portion of smooth muscle tissue that is part of a digestive system [Automatically generated definition]. EMAPA:35117 MA:0001523 smooth muscle tissue of gastrointestinal system uberon UBERON:0004226 gastrointestinal system smooth muscle UBERON:0004226 A portion of smooth muscle tissue that is part of a digestive system [Automatically generated definition]. OBOL:automatic smooth muscle tissue of gastrointestinal system OBOL:automatic A portion of smooth muscle tissue that is part of a lower respiratory tract [Automatically generated definition]. EMAPA:35520 MA:0002410 involuntary muscle of lower respiratory tract lower respiratory tract involuntary muscle lower respiratory tract non-striated muscle lower respiratory tract smooth muscle tissue non-striated muscle of lower respiratory tract smooth muscle of lower respiratory tract smooth muscle tissue of lower respiratory tract uberon UBERON:0004233 lower respiratory tract smooth muscle UBERON:0004233 A portion of smooth muscle tissue that is part of a lower respiratory tract [Automatically generated definition]. OBOL:automatic involuntary muscle of lower respiratory tract OBOL:automatic lower respiratory tract involuntary muscle OBOL:automatic lower respiratory tract non-striated muscle OBOL:automatic lower respiratory tract smooth muscle tissue OBOL:automatic non-striated muscle of lower respiratory tract OBOL:automatic smooth muscle of lower respiratory tract OBOL:automatic smooth muscle tissue of lower respiratory tract OBOL:automatic A portion of smooth muscle tissue that is part of a iris [Automatically generated definition]. BTO:0000655 EMAPA:35448 FMA:312338 MA:0001270 involuntary muscle of iris iridial smooth muscle iris involuntary muscle iris non-striated muscle iris smooth muscle tissue non-striated muscle of iris smooth muscle of iris smooth muscle tissue of iris uberon UBERON:0004234 iris smooth muscle UBERON:0004234 A portion of smooth muscle tissue that is part of a iris [Automatically generated definition]. OBOL:automatic involuntary muscle of iris OBOL:automatic iridial smooth muscle http://orcid.org/0000-0002-6601-2165 iris involuntary muscle OBOL:automatic iris non-striated muscle OBOL:automatic iris smooth muscle tissue OBOL:automatic non-striated muscle of iris OBOL:automatic smooth muscle of iris OBOL:automatic smooth muscle tissue of iris OBOL:automatic A portion of smooth muscle tissue that is part of an arteriole [Automatically generated definition]. EMAPA:36287 FMA:312251 MA:0000706 uberon UBERON:0004236 arteriole smooth muscle UBERON:0004236 A portion of smooth muscle tissue that is part of an arteriole [Automatically generated definition]. OBOL:automatic Smooth muscle found within, and composing the majority of the wall of blood vessels. UBERON:0010508 BTO:0001431 CALOHA:TS-1107 EMAPA:35177 MA:0000710 MESH:D009131 NCIT:C33853 TAO:0005321 Wikipedia:Vascular_smooth_muscle ZFA:0005321 blood vessel involuntary muscle blood vessel non-striated muscle blood vessel smooth muscle tissue involuntary muscle of blood vessel non-striated muscle of blood vessel smooth muscle of blood vessel smooth muscle tissue of blood vessel vascular smooth muscle vascular smooth muscle tissue uberon UBERON:0004237 blood vessel smooth muscle UBERON:0004237 Smooth muscle found within, and composing the majority of the wall of blood vessels. Wikipedia:Vascular_smooth_muscle blood vessel involuntary muscle OBOL:automatic blood vessel non-striated muscle OBOL:automatic blood vessel smooth muscle tissue OBOL:automatic involuntary muscle of blood vessel OBOL:automatic non-striated muscle of blood vessel OBOL:automatic smooth muscle of blood vessel OBOL:automatic smooth muscle tissue of blood vessel OBOL:automatic vascular smooth muscle ZFA:0005321 A portion of smooth muscle tissue that is part of a bronchus [Automatically generated definition]. BTO:0004401 EMAPA:35195 MA:0001840 NCIT:C49213 bronchi involuntary muscle bronchi non-striated muscle bronchi smooth muscle bronchi smooth muscle tissue bronchial trunk involuntary muscle bronchial trunk non-striated muscle bronchial trunk smooth muscle bronchial trunk smooth muscle tissue bronchus involuntary muscle bronchus non-striated muscle bronchus smooth muscle tissue involuntary muscle of bronchi involuntary muscle of bronchial trunk involuntary muscle of bronchus non-striated muscle of bronchi non-striated muscle of bronchial trunk non-striated muscle of bronchus smooth muscle of bronchi smooth muscle of bronchial trunk smooth muscle of bronchus smooth muscle tissue of bronchi smooth muscle tissue of bronchial trunk smooth muscle tissue of bronchus uberon bronchial smooth muscle UBERON:0004242 bronchus smooth muscle UBERON:0004242 A portion of smooth muscle tissue that is part of a bronchus [Automatically generated definition]. OBOL:automatic bronchi involuntary muscle OBOL:automatic bronchi non-striated muscle OBOL:automatic bronchi smooth muscle OBOL:automatic bronchi smooth muscle tissue OBOL:automatic bronchial trunk involuntary muscle OBOL:automatic bronchial trunk non-striated muscle OBOL:automatic bronchial trunk smooth muscle OBOL:automatic bronchial trunk smooth muscle tissue OBOL:automatic bronchus involuntary muscle OBOL:automatic bronchus non-striated muscle OBOL:automatic bronchus smooth muscle tissue OBOL:automatic involuntary muscle of bronchi OBOL:automatic involuntary muscle of bronchial trunk OBOL:automatic involuntary muscle of bronchus OBOL:automatic non-striated muscle of bronchi OBOL:automatic non-striated muscle of bronchial trunk OBOL:automatic non-striated muscle of bronchus OBOL:automatic smooth muscle of bronchi OBOL:automatic smooth muscle of bronchial trunk OBOL:automatic smooth muscle of bronchus OBOL:automatic smooth muscle tissue of bronchi OBOL:automatic smooth muscle tissue of bronchial trunk OBOL:automatic smooth muscle tissue of bronchus OBOL:automatic bronchial smooth muscle EMAPA:35195 A portion of smooth muscle tissue that is part of a outflow tract [Automatically generated definition]. MA:0000492 involuntary muscle of outflow tract non-striated muscle of outflow tract outflow tract involuntary muscle outflow tract non-striated muscle outflow tract smooth muscle tissue smooth muscle of outflow tract smooth muscle tissue of outflow tract uberon UBERON:0004246 outflow tract smooth muscle UBERON:0004246 A portion of smooth muscle tissue that is part of a outflow tract [Automatically generated definition]. OBOL:automatic involuntary muscle of outflow tract OBOL:automatic non-striated muscle of outflow tract OBOL:automatic outflow tract involuntary muscle OBOL:automatic outflow tract non-striated muscle OBOL:automatic outflow tract smooth muscle tissue OBOL:automatic smooth muscle of outflow tract OBOL:automatic smooth muscle tissue of outflow tract OBOL:automatic A bone that is part of the dorsal region of an animal. MA:0000494 uberon back bone bone of back dorsal region bone UBERON:0004247 bone of dorsum UBERON:0004247 A bone that is part of the dorsal region of an animal. http://orcid.org/0000-0002-6601-2165 back bone MA:0000494 bone of back OBOL:automatic dorsal region bone http://orcid.org/0000-0002-6601-2165 Any muscle organ that is part of a skin of body [Automatically generated definition]. UBERON:0015797 EMAPA:18187 EMAPA:35776 MA:0002710 MA:0003139 integumental system muscle muscle of integumental system muscle organ of skin skin muscle organ uberon UBERON:0004253 skin muscle UBERON:0004253 Any muscle organ that is part of a skin of body [Automatically generated definition]. OBOL:automatic integumental system muscle MA:0003139 muscle of integumental system EMAPA:18187 muscle organ of skin OBOL:automatic skin muscle organ OBOL:automatic A blood vessel that is part of a back [Automatically generated definition]. MA:0000493 blood vessel of back uberon UBERON:0004258 back blood vessel UBERON:0004258 A blood vessel that is part of a back [Automatically generated definition]. OBOL:automatic blood vessel of back OBOL:automatic A myocardium that is part of a outflow tract [Automatically generated definition]. EHDAA2:0001358 EMAPA:35623 MA:0000489 VHOG:0000603 cardiac muscle of outflow tract heart muscle of outflow tract heart myocardium of outflow tract muscle of heart of outflow tract myocardium of outflow tract outflow tract cardiac muscle outflow tract heart muscle outflow tract heart myocardium outflow tract muscle of heart uberon UBERON:0004265 outflow tract myocardium UBERON:0004265 A myocardium that is part of a outflow tract [Automatically generated definition]. OBOL:automatic cardiac muscle of outflow tract OBOL:automatic heart muscle of outflow tract OBOL:automatic heart myocardium of outflow tract OBOL:automatic muscle of heart of outflow tract OBOL:automatic myocardium of outflow tract OBOL:automatic outflow tract cardiac muscle OBOL:automatic outflow tract heart muscle OBOL:automatic outflow tract heart myocardium OBOL:automatic outflow tract muscle of heart OBOL:automatic A portion of connective tissue that is part of a back [Automatically generated definition]. MA:0000495 uberon mesenchyne of back UBERON:0004267 back connective tissue UBERON:0004267 A portion of connective tissue that is part of a back [Automatically generated definition]. OBOL:automatic mesenchyne of back OBOL:automatic A pericardium that is part of a outflow tract [Automatically generated definition]. MA:0000491 pericardium of outflow tract uberon UBERON:0004271 outflow tract pericardium UBERON:0004271 A pericardium that is part of a outflow tract [Automatically generated definition]. OBOL:automatic pericardium of outflow tract OBOL:automatic A cranial suture that is part of a cartilaginous joint [Automatically generated definition]. MA:0001498 articulatio cartilaginea cranial suture articulatio cartilaginea cranial sutures articulatio cartilaginea cranial sutures set articulatio cartilaginea cranium suture articulatio cartilaginea suture of cranium cartilaginous joint cranial suture cartilaginous joint cranial sutures cartilaginous joint cranial sutures set cartilaginous joint cranium suture cartilaginous joint suture of cranium cranial suture of articulatio cartilaginea cranial suture of cartilaginous joint cranial sutures of articulatio cartilaginea cranial sutures of cartilaginous joint cranial sutures set of articulatio cartilaginea cranial sutures set of cartilaginous joint cranium suture of articulatio cartilaginea cranium suture of cartilaginous joint suture of cranium of articulatio cartilaginea suture of cranium of cartilaginous joint uberon UBERON:0004273 cartilaginous joint suture UBERON:0004273 A cranial suture that is part of a cartilaginous joint [Automatically generated definition]. OBOL:automatic articulatio cartilaginea cranial suture OBOL:automatic articulatio cartilaginea cranial sutures OBOL:automatic articulatio cartilaginea cranial sutures set OBOL:automatic articulatio cartilaginea cranium suture OBOL:automatic articulatio cartilaginea suture of cranium OBOL:automatic cartilaginous joint cranial suture OBOL:automatic cartilaginous joint cranial sutures OBOL:automatic cartilaginous joint cranial sutures set OBOL:automatic cartilaginous joint cranium suture OBOL:automatic cartilaginous joint suture of cranium OBOL:automatic cranial suture of articulatio cartilaginea OBOL:automatic cranial suture of cartilaginous joint OBOL:automatic cranial sutures of articulatio cartilaginea OBOL:automatic cranial sutures of cartilaginous joint OBOL:automatic cranial sutures set of articulatio cartilaginea OBOL:automatic cranial sutures set of cartilaginous joint OBOL:automatic cranium suture of articulatio cartilaginea OBOL:automatic cranium suture of cartilaginous joint OBOL:automatic suture of cranium of articulatio cartilaginea OBOL:automatic suture of cranium of cartilaginous joint OBOL:automatic A muscle that is part of the eye region. AAO:0000156 EMAPA:35335 MA:0000271 uberon UBERON:0004277 eye muscle UBERON:0004277 A muscle that is part of the eye region. OBOL:automatic Anatomical cluster that consists of all the skeletal elements (eg., bone, cartilage, and teeth) of the body. AEO:0000168 EHDAA2:0001843 EHDAA:5047 EMAPA:17213 FMA:23875 GAID:177 MA:0003006 MAT:0000032 MESH:D012863 MIAA:0000032 SCTID:361378004 VSAO:0000026 Wikipedia:Skeleton XAO:0004053 galen:Skeleton set of all bones set of bones of body uberon UBERON:0004288 skeleton UBERON:0004288 Anatomical cluster that consists of all the skeletal elements (eg., bone, cartilage, and teeth) of the body. VSAO:0000026 The bilaminar epithelium formed from the myotome and dermatome. AAO:0010572 AEO:0000214 EHDAA2:0003259 EMAPA:31109 FMA:295654 NCIT:C34140 TAO:0001513 VHOG:0000676 ZFA:0001513 uberon dermamyotome UBERON:0004290 dermomyotome UBERON:0004290 The bilaminar epithelium formed from the myotome and dermatome. AEO:0000214 dermamyotome VHOG:0000676 A cone-like structure that is formed when myocardial progenitor cells of the heart field fuse at the midline. The heart rudiment is the first structure of the heart tube. TAO:0000115 ZFA:0000115 heart cone rudimentary heart uberon UBERON:0004291 heart rudiment UBERON:0004291 A cone-like structure that is formed when myocardial progenitor cells of the heart field fuse at the midline. The heart rudiment is the first structure of the heart tube. GO:0003313 heart cone GO:0003313 rudimentary heart ZFA:0000115 Dense connective tissue that separates the atria from the ventricles and provides physical support for the heart. EMAPA:36645 FMA:9496 Wikipedia:Cardiac_skeleton cardiac fibrous skeleton fibrous skeleton of heart heart fibrous skeleton skeleton of heart uberon UBERON:0004292 cardiac skeleton UBERON:0004292 Dense connective tissue that separates the atria from the ventricles and provides physical support for the heart. GO:0003204 Wikipedia:Cardiac_skeleton cardiac fibrous skeleton EMAPA:36645 heart fibrous skeleton GO:0003204 skeleton of heart FMA:9496 A nerve that is part of a parasympathetic nervous system [Automatically generated definition]. EHDAA2:0001401 EMAPA:17271 MA:0000224 SCTID:276146002 VHOG:0000641 nerve of parasympathetic nervous system uberon UBERON:0004293 parasympathetic nerve UBERON:0004293 A nerve that is part of a parasympathetic nervous system [Automatically generated definition]. OBOL:automatic nerve of parasympathetic nervous system OBOL:automatic A blood vessel smooth muscle that is part of a respiratory system [Automatically generated definition]. MA:0001806 smooth muscle tissue of blood vessel of respiratory system uberon UBERON:0004297 respiratory system blood vessel smooth muscle UBERON:0004297 A blood vessel smooth muscle that is part of a respiratory system [Automatically generated definition]. OBOL:automatic smooth muscle tissue of blood vessel of respiratory system OBOL:automatic Outermost layer of cells in the blastodermic vesicle, which will develop into the trophoblast layer and then contact the endometrium and take part in establishing the embryo's means of nutrition. BTO:0001840 EHDAA2:0002091 EHDAA:56 EMAPA:16046 VHOG:0000979 uberon UBERON:0004345 trophectoderm UBERON:0004345 Outermost layer of cells in the blastodermic vesicle, which will develop into the trophoblast layer and then contact the endometrium and take part in establishing the embryo's means of nutrition. MP:0005028 The embryonic structure that gives rise to the corneal ectoderm. EHDAA:938 EMAPA:16322 RETIRED_EHDAA2:0001308 VHOG:0001296 uberon UBERON:0004348 optic eminence UBERON:0004348 The embryonic structure that gives rise to the corneal ectoderm. MP:0006305 Multilayered ectodermal region at the distal tip of a limb or fin bud necessary for the proper development of the underlying mesenchyme[MP,modified]. Along with the zone of polarizing activity, it is a crucial organizing region during limb development[WP]. AAO:0010760 EMAPA:32744 NCIT:C34109 TAO:0002146 Wikipedia:Apical_ectodermal_ridge XAO:0004121 ZFA:0001702 apical epidermal ridge uberon AER UBERON:0004356 apical ectodermal ridge UBERON:0004356 Multilayered ectodermal region at the distal tip of a limb or fin bud necessary for the proper development of the underlying mesenchyme[MP,modified]. Along with the zone of polarizing activity, it is a crucial organizing region during limb development[WP]. MP:0001676 Wikipedia:Apical_ectodermal_ridge apical epidermal ridge XAO:0004121 AER MP:0001676 An outgrowth on the lateral trunk of the embryo that develops into a limb or paired fin. The limb/fin bud is divided into ectoderm and mesenchyme[cjm, modified from MP]. VHOG:0001258 limb - fin bud paired appendage bud paired limb/fin bud uberon UBERON:0004357 Genes: In limb buds of chick and mouse, Shh expression is activated as soon as there is a morphological bud, whereas in S. canicula fin buds, consistent with reported data in other cartilaginous fishes, Shh is transcribed late in fin development[PMID:17187056] paired limb/fin bud UBERON:0004357 An outgrowth on the lateral trunk of the embryo that develops into a limb or paired fin. The limb/fin bud is divided into ectoderm and mesenchyme[cjm, modified from MP]. ISBN:9780878932504 MP:0005650 https://orcid.org/0000-0002-6601-2165 limb - fin bud VHOG:0001258 paired limb/fin bud VHOG:0001258 The first of the series of pharyngeal arches that develop into jaw bones or their homologs, and their associated nerves and arteries. AAO:0010364 CALOHA:TS-2089 EHDAA2:0000006 EHDAA:573 EMAPA:16118 FMA:293019 MFMO:0000095 NCIT:C34175 SCTID:308767008 TAO:0001595 VHOG:0000296 Wikipedia:First_pharyngeal_arch XAO:0000097 ZFA:0001612 1st pharyngeal arch first pharyngeal arch mandibular arch uberon 1st arch 1st visceral arch UBERON:0004362 pharyngeal arch 1 UBERON:0004362 The first of the series of pharyngeal arches that develop into jaw bones or their homologs, and their associated nerves and arteries. http://orcid.org/0000-0002-6601-2165 1st arch EHDAA2:0000006 1st visceral arch VHOG:0000296 One of a series of paired embryological vascular structures formed within a pharyngeal arch; in the adult, some of these vessels give rise to the great vessels[MP]. UBERON:0004342 AAO:0010414 EFO:0003695 EHDAA2:0000186 EHDAA:398 EHDAA:7327 EMAPA:16684 NCIT:C32123 TAO:0005004 VHOG:0000122 Wikipedia:Aortic_arches XAO:0000341 ZFA:0005004 aortic arch branchial arch artery embryonic aortic arch artery pharyngeal arch artery uberon aortic arch artery pharyngeal arch artery UBERON:0004363 pharyngeal arch artery UBERON:0004363 One of a series of paired embryological vascular structures formed within a pharyngeal arch; in the adult, some of these vessels give rise to the great vessels[MP]. MP:0002672 aortic arch ZFA:0005004 branchial arch artery EMAPA:16684 embryonic aortic arch artery EMAPA:16684 MP:0002672 pharyngeal arch artery MP:0002672 aortic arch artery EMAPA:16684 pharyngeal arch artery VHOG:0000122 Thickened trophoblast of the blastocyst in rodents that becomes the fetal portion of the placenta. BTO:0001715 EMAPA:16059 epamniotic cone placenta - ectoplacental cone uberon UBERON:0004364 ectoplacental cone UBERON:0004364 Thickened trophoblast of the blastocyst in rodents that becomes the fetal portion of the placenta. MP:0001717 PMID:19829370 Blood vessel that is connected to the yolk sac. EMAPA:36494 uberon UBERON:0004365 vitelline blood vessel UBERON:0004365 Blood vessel that is connected to the yolk sac. http://orcid.org/0000-0002-6601-2165 A transparent homogeneous acellular layer found between the substantia propria and the endothelial layer of the cornea[MP]. EMAPA:18804 FMA:58309 GAID:894 MA:0001246 MESH:D003886 NCIT:C32454 SCTID:281076002 TAO:0002157 Wikipedia:Descemet%27s_membrane ZFA:0001686 Descemet membrane Descemet's posterior elastic lamina lamina limitans posterior posterior limiting lamina posterior limiting lamina of cornea posterior limiting membrane uberon UBERON:0004367 The strong, resistant, thin, noncellular fourth layer of the cornea, located between the endothelium (from which it is secreted) and the stroma. (Cline et al., Dictionary of Visual Science, 4th ed) Descemet's membrane UBERON:0004367 A transparent homogeneous acellular layer found between the substantia propria and the endothelial layer of the cornea[MP]. MP:0004285 https://github.com/obophenotype/uberon/issues/15 Descemet's posterior elastic lamina FMA:58309 lamina limitans posterior FMA:58309 posterior limiting lamina MA:0001246 posterior limiting lamina of cornea FMA:58309 posterior limiting membrane ZFA:0001686 A transparent homogeneous acellular layer, 6 to 9 um thick, lying between the basal lamina of the outer layer of stratified epithelium and the substantia propria of the cornea; it is considered to be a basement membrane. FMA:58273 MA:0001240 NCIT:C32226 SCTID:281075003 TAO:0002155 Wikipedia:Bowman%27s_membrane ZFA:0001684 Bowman's anterior elastic lamina Bowman's layer Bowman's membrane anterior elastic lamina anterior limiting lamina anterior limiting lamina of cornea lamina limitans anterior (cornea) uberon anterior limiting membrane UBERON:0004370 anterior limiting lamina of cornea UBERON:0004370 A transparent homogeneous acellular layer, 6 to 9 um thick, lying between the basal lamina of the outer layer of stratified epithelium and the substantia propria of the cornea; it is considered to be a basement membrane. ncithesaurus:Bowman_s_Membrane Bowman's anterior elastic lamina FMA:58273 Bowman's layer FMA:58273 Bowman's membrane FMA:58273 anterior elastic lamina ZFA:0001684 anterior limiting lamina MA:0001240 anterior limiting lamina of cornea FMA:58273 lamina limitans anterior (cornea) FMA:58273 anterior limiting membrane ZFA:0001684 Vascular network that is connected to the yolk sac. Wikipedia:Vitelline_circulation uberon omphalomesenteric system vitelline bloos vessel system vitelline system UBERON:0004374 vitelline vasculature UBERON:0004374 Vascular network that is connected to the yolk sac. http://orcid.org/0000-0002-6601-2165 omphalomesenteric system https://orcid.org/0000-0002-6601-2165 vitelline bloos vessel system https://orcid.org/0000-0002-6601-2165 vitelline system https://orcid.org/0000-0002-6601-2165 A bone that is part of an appendage [Automatically generated definition]. appendage bone bone of appendage bone of free segment of appendicular skeleton uberon UBERON:0004375 bone of free limb or fin UBERON:0004375 A bone that is part of an appendage [Automatically generated definition]. OBOL:automatic One of three main pairs of arteries and their branches, which irrigate the cerebrum of the brain. AAO:0010493 BTO:0005205 CALOHA:TS-0126 EHDAA2:0000233 EHDAA:5294 EMAPA:18613 GAID:484 MA:0002562 MESH:D002536 NCIT:C12691 SCTID:181308008 Wikipedia:Cerebral_artery XAO:0000367 uberon UBERON:0004449 cerebral artery UBERON:0004449 One of three main pairs of arteries and their branches, which irrigate the cerebrum of the brain. Wikipedia:Cerebral_artery An embryo at the neurula stage. UBERON:0007013 BILA:0000061 BTO:0001766 NCIT:C34229 neurula uberon UBERON:0004455 neurula embryo UBERON:0004455 An embryo at the neurula stage. http://orcid.org/0000-0002-6601-2165 neurula BTO:0001766 Sum of all sensory systems in an organism. FMA:78499 sense organ system uberon UBERON:0004456 entire sense organ system UBERON:0004456 Sum of all sensory systems in an organism. http://orcid.org/0000-0002-6601-2165 sense organ system FMA:78499 Any collection of skeletal muscles that is part of a head [Automatically generated definition]. EMAPA:18171 FMA:71287 head musculature muscle group of head muscles of head set of muscles of head uberon UBERON:0004461 This class is restricted to skeletal muscles that attach to the cranial skeleton. This seems to be consistent with FMA and EMAPA usage. Note that by definition this excludes invertebrate head musculature. It corresponds to the individual muscle organ term UBERON:0002376 skeletal musculature of head UBERON:0004461 Any collection of skeletal muscles that is part of a head [Automatically generated definition]. OBOL:automatic head musculature FMA:71287 muscle group of head FMA:71287 muscles of head FMA:71287 set of muscles of head FMA:71287 Any collection of muscles that is part of a thorax [Automatically generated definition]. BTO:0000508 FMA:71293 muscle group of thorax muscles of thorax set of muscles of thorax thoracic musculature uberon UBERON:0004464 musculature of thorax UBERON:0004464 Any collection of muscles that is part of a thorax [Automatically generated definition]. OBOL:automatic muscle group of thorax FMA:71293 muscles of thorax FMA:71293 set of muscles of thorax FMA:71293 thoracic musculature FMA:71293 Any collection of muscles that is part of a neck [Automatically generated definition]. AAO:0000091 EMAPA:36050 FMA:71290 MESH:D009334 cervical muscles muscle group of neck muscles of neck neck musculature set of muscles of neck uberon UBERON:0004465 musculature of neck UBERON:0004465 Any collection of muscles that is part of a neck [Automatically generated definition]. OBOL:automatic cervical muscles AAO:0000091 muscle group of neck FMA:71290 muscles of neck FMA:71290 neck musculature FMA:71290 set of muscles of neck FMA:71290 Any collection of muscles that is part of a back [Automatically generated definition]. FMA:71291 muscle group of back muscles of back set of muscles of back uberon UBERON:0004469 musculature of back UBERON:0004469 Any collection of muscles that is part of a back [Automatically generated definition]. OBOL:automatic muscle group of back FMA:71291 muscles of back FMA:71291 set of muscles of back FMA:71291 A subdivision of the musculature of the body in the pectoral girdle region. Includes pectoral and shoulder muscles. AAO:0000423 FMA:33519 muscle group of pectoral girdle pectoral girdle muscles pectoral girdle musculature set of muscles of pectoral girdle uberon UBERON:0004471 musculature of pectoral girdle UBERON:0004471 A subdivision of the musculature of the body in the pectoral girdle region. Includes pectoral and shoulder muscles. https://orcid.org/0000-0002-6601-2165 muscle group of pectoral girdle FMA:33519 pectoral girdle muscles AAO:0000423 pectoral girdle musculature FMA:33519 set of muscles of pectoral girdle FMA:33519 Any collection of muscles that is part of a face. FMA:71288 entire facial musculature facial muscles muscle group of face uberon set of facial muscles set of muscles of face UBERON:0004473 musculature of face UBERON:0004473 Any collection of muscles that is part of a face. OBOL:automatic entire facial musculature https://orcid.org/0000-0002-6601-2165 facial muscles FMA:71288 muscle group of face FMA:71288 set of facial muscles FMA:71288 set of muscles of face FMA:71288 The collection of muscles that are part of the larynx. FMA:264611 FMA:46616 MESH:D007821 Wikipedia:Muscles_of_larynx laryngeal muscles laryngeal muscles set muscle group of larynx set of laryngeal muscles set of muscles of larynx uberon UBERON:0004478 musculature of larynx UBERON:0004478 The collection of muscles that are part of the larynx. http://orcid.org/0000-0002-6601-2165 laryngeal muscles FMA:46616 laryngeal muscles set FMA:46616 muscle group of larynx FMA:46616 set of laryngeal muscles FMA:46616 set of muscles of larynx FMA:264611 Any collection of muscles that is part of a trunk [Automatically generated definition]. AAO:0011572 EFO:0003531 FMA:50187 muscle group of trunk set of muscles of trunk uberon muscular system of trunk UBERON:0004479 musculature of trunk UBERON:0004479 Any collection of muscles that is part of a trunk [Automatically generated definition]. OBOL:automatic muscle group of trunk FMA:50187 set of muscles of trunk FMA:50187 muscular system of trunk FMA:50187 A portion of cardiac muscle tissue that is part of an atrium [Automatically generated definition]. FMA:7283 atrial cardiac muscle tissue atrial heart muscle cardiac atrium muscle uberon atrial myocardium UBERON:0004490 cardiac muscle tissue of atrium UBERON:0004490 A portion of cardiac muscle tissue that is part of an atrium [Automatically generated definition]. OBOL:automatic atrial cardiac muscle tissue GO:0055009 atrial heart muscle GO:0055009 cardiac atrium muscle GO:0055009 atrial myocardium GO:0055009 GOC:mtg_heart A portion of cardiac muscle tissue that is part of a interatrial septum [Automatically generated definition]. FMA:84083 interatrial septum cardiac muscle tissue interatrial septum heart muscle interatrial septum muscle interatrial septum myocardium uberon UBERON:0004491 cardiac muscle tissue of interatrial septum UBERON:0004491 A portion of cardiac muscle tissue that is part of a interatrial septum [Automatically generated definition]. OBOL:automatic interatrial septum cardiac muscle tissue http://orcid.org/0000-0002-6601-2165 interatrial septum heart muscle http://orcid.org/0000-0002-6601-2165 interatrial septum muscle http://orcid.org/0000-0002-6601-2165 interatrial septum myocardium http://orcid.org/0000-0002-6601-2165 A portion of cardiac muscle tissue that is part of a cardiac septum [Automatically generated definition]. FMA:226279 cardiac septum cardiac muscle tissue cardiac septum heart muscle cardiac septum muscle cardiac septum myocardium uberon UBERON:0004492 cardiac muscle tissue of cardiac septum UBERON:0004492 A portion of cardiac muscle tissue that is part of a cardiac septum [Automatically generated definition]. OBOL:automatic cardiac septum cardiac muscle tissue http://orcid.org/0000-0002-6601-2165 cardiac septum heart muscle http://orcid.org/0000-0002-6601-2165 cardiac septum muscle http://orcid.org/0000-0002-6601-2165 cardiac septum myocardium http://orcid.org/0000-0002-6601-2165 A portion of cardiac muscle tissue that is part of a myocardium [Automatically generated definition]. FMA:261726 MA:0002441 uberon UBERON:0004493 cardiac muscle tissue of myocardium UBERON:0004493 A portion of cardiac muscle tissue that is part of a myocardium [Automatically generated definition]. OBOL:automatic A portion of skeletal muscle tissue that is part of a diaphragm [Automatically generated definition]. FMA:261898 uberon UBERON:0004495 skeletal muscle tissue of diaphragm UBERON:0004495 A portion of skeletal muscle tissue that is part of a diaphragm [Automatically generated definition]. OBOL:automatic A vasculature that is part of a muscle organ [Automatically generated definition]. FMA:87123 muscular organ vasculature uberon UBERON:0004521 vasculature of muscle organ UBERON:0004521 A vasculature that is part of a muscle organ [Automatically generated definition]. OBOL:automatic muscular organ vasculature FMA:87123 A vasculature that is part of a musculoskeletal system [Automatically generated definition]. FMA:239607 uberon UBERON:0004522 vasculature of musculoskeletal system UBERON:0004522 A vasculature that is part of a musculoskeletal system [Automatically generated definition]. OBOL:automatic Anatomical system that has as its parts the heart and blood vessels. AAO:0011001 BILA:0000016 BTO:0000088 CALOHA:TS-1297 EFO:0000791 EHDAA:394 EMAPA:16104 EV:0100017 FMA:7161 GAID:467 MA:0000010 MAT:0000016 MESH:D002319 MIAA:0000016 NCIT:C12686 SCTID:278198007 TAO:0000010 VHOG:0000302 WikipediaCategory:Cardiovascular_system XAO:0000100 XAO:0001010 ZFA:0000010 uberon CV system Herz und Gefaesssystem UBERON:0004535 cardiovascular system UBERON:0004535 Anatomical system that has as its parts the heart and blood vessels. BTO:0000088 CV system BTO:0000088 Herz und Gefaesssystem BTO:0000088 A vascular network consisting of blood vessels. TAO:0001079 ZFA:0001079 blood vascular network set of blood vessels uberon blood system blood vessel system blood vessels UBERON:0004537 blood vasculature UBERON:0004537 A vascular network consisting of blood vessels. https://orcid.org/0000-0002-6601-2165 blood vessels TAO:0001079 An eye that is part of a left side of organism [Automatically generated definition]. FMA:12515 MA:0002949 NCIT:C119334 SCTID:362503005 left eyeball left orbital part of face left orbital region uberon UBERON:0004548 left eye UBERON:0004548 An eye that is part of a left side of organism [Automatically generated definition]. OBOL:automatic left eyeball FMA:12515 left orbital part of face FMA:54450 left orbital region FMA:54450 An eye that is part of a right side of organism [Automatically generated definition]. FMA:12514 MA:0002950 NCIT:C119333 SCTID:362502000 right eyeball right orbital part of face right orbital region uberon UBERON:0004549 right eye UBERON:0004549 An eye that is part of a right side of organism [Automatically generated definition]. OBOL:automatic right eyeball FMA:12514 right orbital part of face FMA:54449 right orbital region FMA:54449 The part of the arterial system which carries oxygenated blood away from the heart to the body, and returns deoxygenated blood back to the heart. FMA:45623 Wikipedia:Systemic_circulation#Arteries systemic arterial circulatory system uberon UBERON:0004571 systemic arterial system UBERON:0004571 The part of the arterial system which carries oxygenated blood away from the heart to the body, and returns deoxygenated blood back to the heart. Wikipedia:Systemic_circulation#Arteries http://orcid.org/0000-0002-6601-2165 systemic arterial circulatory system FMA:45623 The part of the cardiovascular system consisting of all arteries. BTO:0004690 EHDAA2:0000143 EHDAA:396 EMAPA:16201 EMAPA:16371 MA:0002719 SCTID:362030008 VHOG:0000273 uberon UBERON:0004572 arterial system UBERON:0004572 The part of the cardiovascular system consisting of all arteries. https://orcid.org/0000-0002-6601-2165 An artery of the systemic circulation, which is the part of the cardiovascular system which carries oxygenated blood away from the heart, to the body, and returns deoxygenated blood back to the heart. FMA:66464 Wikipedia:Artery#Systemic_arteries systemic arterial subtree uberon UBERON:0004573 systemic artery UBERON:0004573 An artery of the systemic circulation, which is the part of the cardiovascular system which carries oxygenated blood away from the heart, to the body, and returns deoxygenated blood back to the heart. Wikipedia:Artery#Systemic_arteries http://orcid.org/0000-0002-6601-2165 systemic arterial subtree FMA:66464 The part of the venous system that drains the general body tissues[Kardong]. FMA:45626 Wikipedia:Systemic_venous_system systemic venous circulatory system uberon UBERON:0004581 systemic venous system UBERON:0004581 The part of the venous system that drains the general body tissues[Kardong]. ISBN:0073040584 Wikipedia:Systemic_venous_system systemic venous circulatory system FMA:45626 The part of the cardiovascular system consisting of all venous vessels. In vertebrates with a double circulation, this can be divided into systemic and pulmonary portions. BTO:0004692 EHDAA2:0002171 EHDAA:486 EMAPA:16240 MA:0002720 NCIT:C33858 SCTID:362060003 VHOG:0000277 vein system uberon UBERON:0004582 venous system UBERON:0004582 The part of the cardiovascular system consisting of all venous vessels. In vertebrates with a double circulation, this can be divided into systemic and pulmonary portions. https://orcid.org/0000-0002-6601-2165 An endothelium that lines the blood vasculature. Other endothelia may line lymph vessels, the heart. BTO:0000766 CALOHA:TS-2155 EMAPA:35176 MA:0000709 NCIT:C53395 TAO:0005257 ZFA:0005257 uberon UBERON:0004638 blood vessel endothelium UBERON:0004638 An endothelium that lines the blood vasculature. Other endothelia may line lymph vessels, the heart. https://orcid.org/0000-0002-6601-2165 An anatomical wall that is part of an aorta, enclosing the luminal space. EMAPA:35139 FMA:14156 MA:0002901 aortic wall wall of aorta uberon UBERON:0004663 aorta wall UBERON:0004663 An anatomical wall that is part of an aorta, enclosing the luminal space. http://orcid.org/0000-0002-6601-2165 aortic wall FMA:14156 wall of aorta FMA:14156 The outermost layer of the aorta wall, containing connective tissue and collagen and elastic fibers. EMAPA:35136 FMA:14283 MA:0002902 SCTID:24996002 tunica adventitia of aorta uberon UBERON:0004664 aorta tunica adventitia UBERON:0004664 The outermost layer of the aorta wall, containing connective tissue and collagen and elastic fibers. ISBN:0-683-40008-8 MP:0009871 tunica adventitia of aorta FMA:14283 The membranous portion of the wall between the two lower chambers of the heart. UBERON:0004143 membranous septum ventricle membranous septum ventricular membranous septum EHDAA2:0004596 EMAPA:18246 FMA:7135 MA:0002939 SCTID:278228007 VHOG:0000927 cardiac ventricular membranous septum membranous interventricular septum membranous part interventricular septum membranous part of interventricular septum membranous portion of interventricular septum pars membranacea (septi interventricularis) uberon membranous interventricular septum UBERON:0004666 interventricular septum membranous part UBERON:0004666 The membranous portion of the wall between the two lower chambers of the heart. MP:0008823 membranous septum GO:0003149 ventricle membranous septum VT:0000018 ventricular membranous septum MP:0008823 cardiac ventricular membranous septum http://orcid.org/0000-0002-6601-2165 membranous interventricular septum FMA:7135 membranous part interventricular septum VHOG:0000927 membranous part of interventricular septum FMA:7135 membranous portion of interventricular septum FMA:7135 pars membranacea (septi interventricularis) FMA:7135 membranous interventricular septum MA:0002939 The muscular portion of the wall between the two lower chambers of the heart. UBERON:0004144 muscular septum EHDAA2:0000885 EHDAA:2607 EMAPA:18247 FMA:7134 MA:0002940 RETIRED_EHDAA2:0000888 cardiac ventricular muscular septum muscular interventricular septum muscular part interventricular septum muscular part of interventricular septum pars muscularis (septi interventricularis) ventricular muscular septum uberon muscular interventricular septum UBERON:0004667 interventricular septum muscular part UBERON:0004667 The muscular portion of the wall between the two lower chambers of the heart. Wikipedia:Interventricular_septum#Portions http://orcid.org/0000-0002-6601-2165 muscular septum GO:0003150 cardiac ventricular muscular septum http://orcid.org/0000-0002-6601-2165 muscular interventricular septum FMA:7134 muscular part of interventricular septum FMA:7134 pars muscularis (septi interventricularis) FMA:7134 muscular interventricular septum MA:0002940 The raphe nuclei are thin plates of cells in and immediately adjacent to the sagittal plane. BAMS:RA EMAPA:35721 FMA:84017 MA:0003147 MESH:D011903 NCIT:C97335 NLXANAT:20090205 TAO:0001429 Wikipedia:Raphe_nuclei ZFA:0001429 neuronames:2495 raphe nuclei raphe nuclei set uberon raphe cluster raphe nucleus raphe of mesenchephalon set of raphe nuclei UBERON:0004684 we treat NR obscurus, NR magnus etc as parts of the raphe nuclei. This is consistent with treatment in FMA, where the class is 'set of raphe nuclei' raphe nuclei UBERON:0004684 The raphe nuclei are thin plates of cells in and immediately adjacent to the sagittal plane. NLXANAT:20090205 https://sourceforge.net/tracker/?func=detail&aid=3248146&group_id=36855&atid=440764 raphe nuclei FMA:84017 NLXANAT:20090205 raphe nuclei set FMA:84017 raphe cluster Wikipedia:Raphe_nuclei raphe nucleus ZFA:0001429 raphe of mesenchephalon BAMS:RA set of raphe nuclei FMA:84017 The costocervical trunk arises from the upper and back part of the subclavian artery, behind the scalenus anterior on the right side, and medial to that muscle on the left side. Passing backward, it splits into the deep cervical artery and the supreme intercostal artery (or the Highest intercostal artery), which descends behind the pleura in front of the necks of the first and second ribs, and anastomoses with the first aortic intercostal (3rd posterior intercostal artery). As it crosses the neck of the first rib it lies medial to the anterior division of the first thoracic nerve, and lateral to the first thoracic ganglion of the sympathetic trunk. In the first intercostal space, it gives off a branch which is distributed in a manner similar to the distribution of the aortic intercostals. The branch for the second intercostal space usually joins with one from the highest aortic intercostal artery. This branch is not constant, but is more commonly found on the right side; when absent, its place is supplied by an intercostal branch from the aorta. Each intercostal gives off a posterior branch which goes to the posterior vertebral muscles, and sends a small spinal branch through the corresponding intervertebral foramen to the medulla spinalis and its membranes. [WP,unvetted]. FMA:10636 MA:0001939 SCTID:244225009 Wikipedia:Costocervical_trunk costocervical trunk trunk of costocervical artery uberon UBERON:0004688 costo-cervical trunk UBERON:0004688 The costocervical trunk arises from the upper and back part of the subclavian artery, behind the scalenus anterior on the right side, and medial to that muscle on the left side. Passing backward, it splits into the deep cervical artery and the supreme intercostal artery (or the Highest intercostal artery), which descends behind the pleura in front of the necks of the first and second ribs, and anastomoses with the first aortic intercostal (3rd posterior intercostal artery). As it crosses the neck of the first rib it lies medial to the anterior division of the first thoracic nerve, and lateral to the first thoracic ganglion of the sympathetic trunk. In the first intercostal space, it gives off a branch which is distributed in a manner similar to the distribution of the aortic intercostals. The branch for the second intercostal space usually joins with one from the highest aortic intercostal artery. This branch is not constant, but is more commonly found on the right side; when absent, its place is supplied by an intercostal branch from the aorta. Each intercostal gives off a posterior branch which goes to the posterior vertebral muscles, and sends a small spinal branch through the corresponding intervertebral foramen to the medulla spinalis and its membranes. [WP,unvetted]. Wikipedia:Costocervical_trunk costocervical trunk FMA:10636 trunk of costocervical artery FMA:10636 A portion of smooth muscle tissue that is part of an arterial system [Automatically generated definition]. EMAPA:36503 MA:0000704 uberon UBERON:0004695 arterial system smooth muscle UBERON:0004695 A portion of smooth muscle tissue that is part of an arterial system [Automatically generated definition]. OBOL:automatic A portion of smooth muscle tissue that is part of a venous system [Automatically generated definition]. EMAPA:36613 MA:0000715 uberon UBERON:0004696 venous system smooth muscle UBERON:0004696 A portion of smooth muscle tissue that is part of a venous system [Automatically generated definition]. OBOL:automatic An endothelium that is part of a vena cava [Automatically generated definition]. MA:0000713 NCIT:C49318 uberon UBERON:0004698 vena cava endothelium UBERON:0004698 An endothelium that is part of a vena cava [Automatically generated definition]. OBOL:automatic An endothelium that is part of a outflow tract [Automatically generated definition]. MA:0000490 VHOG:0001524 uberon UBERON:0004699 outflow tract endothelium UBERON:0004699 An endothelium that is part of a outflow tract [Automatically generated definition]. OBOL:automatic An endothelium that is part of an arterial system [Automatically generated definition]. EMAPA:35145 MA:0000703 NCIT:C49329 uberon UBERON:0004700 arterial system endothelium UBERON:0004700 An endothelium that is part of an arterial system [Automatically generated definition]. OBOL:automatic An endothelium that is part of a venous system [Automatically generated definition]. EMAPA:35907 MA:0000714 NCIT:C49320 uberon UBERON:0004701 venous system endothelium UBERON:0004701 An endothelium that is part of a venous system [Automatically generated definition]. OBOL:automatic A blood vessel endothelium that is part of a respiratory system [Automatically generated definition]. EMAPA:35732 MA:0001805 uberon UBERON:0004702 respiratory system blood vessel endothelium UBERON:0004702 A blood vessel endothelium that is part of a respiratory system [Automatically generated definition]. OBOL:automatic A transient fetal dilation of the distal (or cranial) heart tube located where the arterial trunk joins the ventral roots of the aortic arches. EHDAA2:0000197 EHDAA:438 EHDAA:768 EMAPA:16333 FMA:70300 NCIT:C34114 SCTID:361525002 Wikipedia:Bulbus_cordis primitive right ventricle endocardium uberon UBERON:0004706 bulbus cordis UBERON:0004706 A transient fetal dilation of the distal (or cranial) heart tube located where the arterial trunk joins the ventral roots of the aortic arches. ISBN:0-683-40008-8 MP:0010568 primitive right ventricle endocardium EHDAA2:0000197 An appendage that is part of an appendage girdle complex. UBERON:0009872 VSAO:0000067 girdle-associated appendage limb or fin limb/fin pectoral or pelvic appendage pelvic/pectoral appendage jointed paired lateral appendage paired appendage uberon UBERON:0004708 paired limb/fin UBERON:0004708 An appendage that is part of an appendage girdle complex. UBERON:cjm https://github.com/geneontology/go-ontology/issues/9029 girdle-associated appendage https://orcid.org/0000-0002-6601-2165 limb or fin https://orcid.org/0000-0002-6601-2165 limb/fin https://orcid.org/0000-0002-6601-2165 pectoral or pelvic appendage https://orcid.org/0000-0002-6601-2165 pelvic/pectoral appendage https://orcid.org/0000-0002-6601-2165 jointed paired lateral appendage https://orcid.org/0000-0002-6601-2165 paired appendage VSAO:0000067 Paired appendage that consists of the anterior appendicular skeleton and associated soft and hard tissues, but excludes the pectoral girdle and its associated soft and hard tissues. UBERON:0009875 anterior appendage VHOG:0001753 VSAO:0000125 anterior limb/fin anterior paired appendage forelimb - pectoral fin forelimb or pectoral fin forelimb/pectoral fin pectoral limb/fin uberon UBERON:0004710 pectoral appendage UBERON:0004710 Paired appendage that consists of the anterior appendicular skeleton and associated soft and hard tissues, but excludes the pectoral girdle and its associated soft and hard tissues. VSAO:0000150-modified anterior limb/fin https://orcid.org/0000-0002-6601-2165 anterior paired appendage VSAO:0000148 forelimb - pectoral fin VHOG:0001753 forelimb or pectoral fin https://orcid.org/0000-0002-6601-2165 forelimb/pectoral fin https://orcid.org/0000-0002-6601-2165 pectoral limb/fin https://orcid.org/0000-0002-6601-2165 The jugular veins are veins that bring deoxygenated blood from the head back to the heart via the superior vena cava. BTO:0001744 CALOHA:TS-0497 EMAPA:18638 GAID:536 MA:0002154 MESH:D007601 NCIT:C12738 SCTID:244403000 Wikipedia:Jugular_vein uberon jugular vena jugularis UBERON:0004711 jugular vein UBERON:0004711 The jugular veins are veins that bring deoxygenated blood from the head back to the heart via the superior vena cava. Wikipedia:Jugular_vein vena jugularis BTO:0001744 The embryo and its adnexa (appendages or adjunct parts) or associated membranes (i.e. the products of conception) The conceptus includes all structures that develop from the zygote, both embryonic and extraembryonic. It includes the embryo as well as the embryonic part of the placenta and its associated membranes - amnion, chorion (gestational sac), and yolk sac[WP]. AEO:0000194 BTO:0003834 EHDAA2:0000001 EHDAA2:0003235 EMAPA:36040 NCIT:C34131 Wikipedia:Conceptus embryo plus adnexa uberon UBERON:0004716 conceptus UBERON:0004716 The embryo and its adnexa (appendages or adjunct parts) or associated membranes (i.e. the products of conception) The conceptus includes all structures that develop from the zygote, both embryonic and extraembryonic. It includes the embryo as well as the embryonic part of the placenta and its associated membranes - amnion, chorion (gestational sac), and yolk sac[WP]. BTO:0003834 Wikipedia:Conceptus A transverse unitary subdivision of the neural tube that shares a common dorsoventral structure (floor, basal, alar, and roof plates), but each having differential molecular identities and fates; they comprise the secondary prosencephalon, diencephalon (prosomeres), the midbrain (mesomeres), and the hindbrain (rhombomeres). 2009-06-18T09:00:04Z NLX:147842 TAO:0001328 Wikipedia:Neuromere ZFA:0001328 neural tube metameric segment neural tube segment neuromere uberon neural metamere neural segment UBERON:0004731 neuromere UBERON:0004731 A transverse unitary subdivision of the neural tube that shares a common dorsoventral structure (floor, basal, alar, and roof plates), but each having differential molecular identities and fates; they comprise the secondary prosencephalon, diencephalon (prosomeres), the midbrain (mesomeres), and the hindbrain (rhombomeres). DOI:10.1016/j.tins.2013.06.004 https://github.com/obophenotype/uberon/issues/318 neural tube metameric segment http://orcid.org/0000-0002-6601-2165 Any segmental subdivision of a nervous system. Includes metameric developmental segments, such as vertebrates neuromeres. uberon neuromere UBERON:0004732 segmental subdivision of nervous system UBERON:0004732 Any segmental subdivision of a nervous system. Includes metameric developmental segments, such as vertebrates neuromeres. FBbt:00005140 http://orcid.org/0000-0002-6601-2165 neuromere FBbt:00005140 An organ subunit that is part of a hindbrain [Automatically generated definition]. FMA:61998 hindbrain segment segment of hindbrain uberon UBERON:0004733 segmental subdivision of hindbrain UBERON:0004733 An organ subunit that is part of a hindbrain [Automatically generated definition]. OBOL:automatic hindbrain segment FMA:61998 segment of hindbrain FMA:61998 Organism at the gastrula stage. UBERON:0007012 BILA:0000060 BTO:0001403 FMA:293108 GAID:1302 MESH:D005775 MIAA:0000179 NCIT:C34057 NCIT:C34058 Wikipedia:Gastrula Wikipedia:Trilaminar_blastocyst gastrula embryo uberon blastocystis trilaminaris tri-laminar disc tri-laminar disk trilaminar blastocyst trilaminar blastoderm trilaminar disc trilaminar disk trilaminar germ UBERON:0004734 gastrula UBERON:0004734 Organism at the gastrula stage. Wikipedia:Gastrula Wikipedia:Trilaminar_blastocyst gastrula embryo BILA:0000060 blastocystis trilaminaris https://orcid.org/0000-0002-6601-2165 tri-laminar disc https://orcid.org/0000-0002-6601-2165 tri-laminar disk https://orcid.org/0000-0002-6601-2165 trilaminar blastocyst https://orcid.org/0000-0002-6601-2165 trilaminar blastoderm https://orcid.org/0000-0002-6601-2165 trilaminar disc https://orcid.org/0000-0002-6601-2165 trilaminar disk https://orcid.org/0000-0002-6601-2165 trilaminar germ https://orcid.org/0000-0002-6601-2165 The dentary is a dermal bone that forms the antero-lateral part of the lower jaw in fishes and amphibians, extending to the whole lower jaw in mammals[VHOG,modified]. AAO:0000124 EFO:0003508 TAO:0000191 VHOG:0001022 ZFA:0000191 http://palaeos.com/vertebrates/bones/dermal/images/Dentary1.gif dentary bone uberon dentale os dentale sur-angulaire UBERON:0004742 dentary UBERON:0004742 The dentary is a dermal bone that forms the antero-lateral part of the lower jaw in fishes and amphibians, extending to the whole lower jaw in mammals[VHOG,modified]. VHOG:0001022 dentary bone ZFA:0000191 dentale AAO:0000124 os dentale AAO:0000124 sur-angulaire AAO:0000124 A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO]. MA:0003047 SCTID:309311006 VSAO:0000015 XAO:0004038 ZFA:0005619 uberon UBERON:0004755 Four classes of mineralized tissues are found in vertebrates: bone, cartilage, dentine, and enamel. We think of cartilage and bone as skeletal tissues and of enamel and dentine as dental tissues, but enamel and dentine arose evolutionarily together with bone as skeletal tissues in the dermal skeleton (exoskeleton) of early vertebrates. Scales and teeth of sharks are examples of dermal skeletal elements that are still composed of the three ancient components-enamel, dentine, and bone. Cartilage, on the other hand, provided the basis for the second vertebrate skeletal system, the endoskeleton (Smith and Hall, 1990; Hall, 1998a,b). some invertebrate skeletal tissues have surprisingly bone-like features. Examples include chondrocytes interconnected by cell processes in cephalopod cartilages (Cole and Hall, 2004a,b), and the calcium phosphate layer in the shells of brachiopods (Rodland et al., 2003). However, neither bone nor mineralized cartilage have been found in invertebrates. Editors notes: TODO - develops_from skeletal tissue UBERON:0004755 A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO]. GO_REF:0000034 PSPUB:0000170 VSAO:0000015 http://dx.plos.org/10.1371/journal.pone.0051070 https://github.com/obophenotype/uberon/issues/134 Dermis-derived entity that is made of skeletal tissue. dermal element uberon UBERON:0004756 dermal skeletal element UBERON:0004756 Dermis-derived entity that is made of skeletal tissue. http://orcid.org/0000-0002-6601-2165 https://github.com/obophenotype/uberon/issues/206 dermal element VSAO:curator The primitive cartilagionous skeletal structure of the fetal skull that grows to envelop the rapidly growing embyonic brain. In humans, the chondrocranium begins forming at 28 days from mesenchymal condensations and is fully formed between week 7 and 9 of fetal development. While the majority of the chondrocranium is succeeded by the bony skull in most higher vertebrates, some components do persist into adulthood.[1] In Cartilagious fishes and Agnathans, the chondrocranium persist throughout life.[2] Embryologically, the chondrocranium represent the basal cranial structure, and lay the base for the formation of the endocranium in higher vertebrates[WP]. AAO:0000094 EHDAA:6031 FMA:76621 NCIT:C34121 SCTID:155540009 Wikipedia:Chondrocranium XAO:0003059 cartilaginous chondocranium cartiligionous skeletal structure of skull uberon cartilaginous skull chondocranium embryonic chondocranium UBERON:0004761 cartilaginous neurocranium UBERON:0004761 The primitive cartilagionous skeletal structure of the fetal skull that grows to envelop the rapidly growing embyonic brain. In humans, the chondrocranium begins forming at 28 days from mesenchymal condensations and is fully formed between week 7 and 9 of fetal development. While the majority of the chondrocranium is succeeded by the bony skull in most higher vertebrates, some components do persist into adulthood.[1] In Cartilagious fishes and Agnathans, the chondrocranium persist throughout life.[2] Embryologically, the chondrocranium represent the basal cranial structure, and lay the base for the formation of the endocranium in higher vertebrates[WP]. Wikipedia:Chondrocranium chondocranium Wikipedia:Chondrocranium Bone tissue that forms directly within mesenchyme, and does not replace other tissues[TAO]. Intramembranous ossification is the formation of bone in which osteoblasts secrete a collagen-proteoglycan matrix that binds calcium salts and becomes calcified[GO]. Intramembranous ossification is the way flat bones and the shell of a turtle are formed[GO]. Unlike endochondral ossification, cartilage is not present during intramembranous ossification[WP]. MA:0002837 Wikipedia:Intramembranous_ossification uberon UBERON:0004764 intramembranous bone tissue UBERON:0004764 Bone tissue that forms directly within mesenchyme, and does not replace other tissues[TAO]. Intramembranous ossification is the formation of bone in which osteoblasts secrete a collagen-proteoglycan matrix that binds calcium salts and becomes calcified[GO]. Intramembranous ossification is the way flat bones and the shell of a turtle are formed[GO]. Unlike endochondral ossification, cartilage is not present during intramembranous ossification[WP]. GO:0001957 Wikipedia:Intramembranous_ossification Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles. AAO:0011129 TAO:0001890 VSAO:0000128 XAO:0004012 ZFA:0005494 galen:SkeletalStructure uberon UBERON:0004765 skeletal element UBERON:0004765 Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles. https://orcid.org/0000-0002-6601-2165 A bone that is part of a cranium. SCTID:181792001 cranium bone uberon UBERON:0004766 cranial bone UBERON:0004766 A bone that is part of a cranium. UBERON:automatic cranium bone UBERON:automatic Any bone that is part of the lower jaw skeleton. This includes (when present): the dentary/mandible, the articular, the splenial, the suprangular. lower jaw bone uberon UBERON:0004768 bone of lower jaw UBERON:0004768 Any bone that is part of the lower jaw skeleton. This includes (when present): the dentary/mandible, the articular, the splenial, the suprangular. https://orcid.org/0000-0002-6601-2165 Anatomical system that consists of all the joints of the body. EMAPA:35150 FMA:23878 MA:0003007 SCTID:361827000 VSAO:0000181 joint system set of all joints of body uberon set of all joints set of joints of body UBERON:0004770 articular system UBERON:0004770 Anatomical system that consists of all the joints of the body. VSAO:0000181 joint system FMA:23878 set of all joints of body FMA:23878 set of joints of body FMA:23878 A submucosa that is part of a respiratory system [Automatically generated definition]. MA:0001822 apparatus respiratorius submucosa submucosa of apparatus respiratorius submucosa of respiratory system uberon UBERON:0004777 respiratory system submucosa UBERON:0004777 A submucosa that is part of a respiratory system [Automatically generated definition]. OBOL:automatic apparatus respiratorius submucosa OBOL:automatic submucosa of apparatus respiratorius OBOL:automatic submucosa of respiratory system OBOL:automatic A submucosa that is part of a larynx [Automatically generated definition]. EMAPA:35474 FMA:321584 MA:0002728 SCTID:361941005 submucosa of larynx uberon laryngeal submucosa UBERON:0004778 larynx submucosa UBERON:0004778 A submucosa that is part of a larynx [Automatically generated definition]. OBOL:automatic submucosa of larynx OBOL:automatic laryngeal submucosa EMAPA:35474 A lamina propria that is part of a respiratory system [Automatically generated definition]. MA:0001821 apparatus respiratorius lamina propria apparatus respiratorius lamina propria mucosa lamina propria mucosa of apparatus respiratorius lamina propria mucosa of respiratory system lamina propria of apparatus respiratorius lamina propria of respiratory system respiratory system lamina propria mucosa uberon UBERON:0004779 respiratory system lamina propria UBERON:0004779 A lamina propria that is part of a respiratory system [Automatically generated definition]. OBOL:automatic apparatus respiratorius lamina propria OBOL:automatic apparatus respiratorius lamina propria mucosa OBOL:automatic lamina propria mucosa of apparatus respiratorius OBOL:automatic lamina propria mucosa of respiratory system OBOL:automatic lamina propria of apparatus respiratorius OBOL:automatic lamina propria of respiratory system OBOL:automatic respiratory system lamina propria mucosa OBOL:automatic A lamina propria that is part of a gastrointestinal system. MA:0001899 NCIT:C49299 uberon UBERON:0004780 gastrointestinal system lamina propria UBERON:0004780 A lamina propria that is part of a gastrointestinal system. OBOL:automatic A serous membrane that is part of a digestive system [Automatically generated definition]. MA:0001522 digestive system serosa digestive system serous membrane gastrointestinal system serous membrane serosa of digestive system serosa of gastrointestinal system serous membrane of digestive system serous membrane of gastrointestinal system uberon UBERON:0004782 gastrointestinal system serosa UBERON:0004782 A serous membrane that is part of a digestive system [Automatically generated definition]. OBOL:automatic digestive system serosa OBOL:automatic digestive system serous membrane OBOL:automatic gastrointestinal system serous membrane OBOL:automatic serosa of digestive system OBOL:automatic serosa of gastrointestinal system OBOL:automatic serous membrane of digestive system OBOL:automatic serous membrane of gastrointestinal system OBOL:automatic An anatomical wall that is part of a cardiac ventricle [Automatically generated definition]. FMA:13884 MA:0002791 NCIT:C119295 anatomical wall of cardiac ventricle anatomical wall of heart ventricle anatomical wall of lower chamber of heart anatomical wall of ventricle of heart cardiac ventricle anatomical wall cardiac ventricle wall heart ventricle anatomical wall lower chamber of heart anatomical wall lower chamber of heart wall ventricle of heart anatomical wall ventricle of heart wall ventricular wall wall of cardiac ventricle wall of heart ventricle wall of lower chamber of heart wall of ventricle of heart uberon wall of ventricle UBERON:0004784 heart ventricle wall UBERON:0004784 An anatomical wall that is part of a cardiac ventricle [Automatically generated definition]. OBOL:automatic anatomical wall of cardiac ventricle OBOL:automatic anatomical wall of heart ventricle OBOL:automatic anatomical wall of lower chamber of heart OBOL:automatic anatomical wall of ventricle of heart OBOL:automatic cardiac ventricle anatomical wall OBOL:automatic cardiac ventricle wall OBOL:automatic heart ventricle anatomical wall OBOL:automatic lower chamber of heart anatomical wall OBOL:automatic lower chamber of heart wall OBOL:automatic ventricle of heart anatomical wall OBOL:automatic ventricle of heart wall OBOL:automatic ventricular wall FMA:13884 wall of cardiac ventricle OBOL:automatic wall of heart ventricle OBOL:automatic wall of lower chamber of heart OBOL:automatic wall of ventricle of heart OBOL:automatic wall of ventricle MA:0002791 The mucous membrane lining the respiratory tract. BTO:0000973 FMA:302092 GAID:304 MA:0001827 MESH:D020545 apparatus respiratorius mucosa apparatus respiratorius mucosa of organ apparatus respiratorius mucous membrane mucosa of apparatus respiratorius mucosa of organ of apparatus respiratorius mucosa of organ of respiratory system mucosa of respiratory system mucous membrane of apparatus respiratorius mucous membrane of respiratory system respiratory system mucosa of organ respiratory system mucous membrane uberon laryngeal mucous membrane respiratory mucosa respiratory tract mucosa UBERON:0004785 respiratory system mucosa UBERON:0004785 The mucous membrane lining the respiratory tract. MESH:A04.760 MGI:cwg MP:0002277 apparatus respiratorius mucosa OBOL:automatic apparatus respiratorius mucosa of organ OBOL:automatic apparatus respiratorius mucous membrane OBOL:automatic mucosa of apparatus respiratorius OBOL:automatic mucosa of organ of apparatus respiratorius OBOL:automatic mucosa of organ of respiratory system OBOL:automatic mucosa of respiratory system OBOL:automatic mucous membrane of apparatus respiratorius OBOL:automatic mucous membrane of respiratory system OBOL:automatic respiratory system mucosa of organ OBOL:automatic respiratory system mucous membrane OBOL:automatic laryngeal mucous membrane EMAPA:18334 respiratory mucosa BTO:0000973 A mucosa that is part of a gastrointestinal system. BTO:0000546 BTO:0005568 EMAPA:36591 MA:0001521 SCTID:410433007 digestive tract mucosa gut mucosa gut mucuous membrane mucosa of gut uberon UBERON:0004786 The gut mucosa of amphioxus has insulin-secreting cells. http://www.ncbi.nlm.nih.gov/pubmed/16417468 gastrointestinal system mucosa UBERON:0004786 A mucosa that is part of a gastrointestinal system. OBOL:automatic digestive tract mucosa https://orcid.org/0000-0002-6601-2165 gut mucosa BTO:0000546 gut mucuous membrane https://orcid.org/0000-0002-6601-2165 mucosa of gut https://orcid.org/0000-0002-6601-2165 A secretion that is part of a esophagus [Automatically generated definition]. FMA:79662 MA:0002514 NCIT:C52555 esophageal secretion gullet secretion oesophagus secretion secretion of esophagus secretion of gullet secretion of oesophagus uberon UBERON:0004794 esophagus secretion UBERON:0004794 A secretion that is part of a esophagus [Automatically generated definition]. OBOL:automatic esophageal secretion FMA:79662 gullet secretion OBOL:automatic oesophagus secretion OBOL:automatic secretion of esophagus OBOL:automatic secretion of gullet OBOL:automatic secretion of oesophagus OBOL:automatic Any of the tissue layers that comprise a blood vessel. Examples: tunica media, tunica adventitia. EMAPA:36296 MA:0002854 uberon UBERON:0004797 blood vessel layer UBERON:0004797 Any of the tissue layers that comprise a blood vessel. Examples: tunica media, tunica adventitia. http://orcid.org/0000-0002-6601-2165 A basal lamina that is part of a respiratory system [Automatically generated definition]. MA:0001816 apparatus respiratorius basal lamina apparatus respiratorius basal lamina of connective tissue basal lamina of apparatus respiratorius basal lamina of connective tissue of apparatus respiratorius basal lamina of connective tissue of respiratory system basal lamina of respiratory system respiratory system basal lamina of connective tissue uberon UBERON:0004798 respiratory system basal lamina UBERON:0004798 A basal lamina that is part of a respiratory system [Automatically generated definition]. OBOL:automatic apparatus respiratorius basal lamina OBOL:automatic apparatus respiratorius basal lamina of connective tissue OBOL:automatic basal lamina of apparatus respiratorius OBOL:automatic basal lamina of connective tissue of apparatus respiratorius OBOL:automatic basal lamina of connective tissue of respiratory system OBOL:automatic basal lamina of respiratory system OBOL:automatic respiratory system basal lamina of connective tissue OBOL:automatic A basal lamina that is part of a respiratory airway [Automatically generated definition]. MA:0001855 NCIT:C49303 basal lamina of connective tissue of respiratory airway uberon UBERON:0004799 trachea basal lamina UBERON:0004799 A basal lamina that is part of a respiratory airway [Automatically generated definition]. OBOL:automatic basal lamina of connective tissue of respiratory airway OBOL:automatic A basal lamina that is part of a bronchus [Automatically generated definition]. MA:0001833 NCIT:C49207 basal lamina of bronchi basal lamina of bronchial trunk basal lamina of bronchus basal lamina of connective tissue of bronchi basal lamina of connective tissue of bronchial trunk basal lamina of connective tissue of bronchus bronchi basal lamina bronchi basal lamina of connective tissue bronchial trunk basal lamina bronchial trunk basal lamina of connective tissue bronchus basal lamina of connective tissue uberon UBERON:0004800 bronchus basal lamina UBERON:0004800 A basal lamina that is part of a bronchus [Automatically generated definition]. OBOL:automatic basal lamina of bronchi OBOL:automatic basal lamina of bronchial trunk OBOL:automatic basal lamina of bronchus OBOL:automatic basal lamina of connective tissue of bronchi OBOL:automatic basal lamina of connective tissue of bronchial trunk OBOL:automatic basal lamina of connective tissue of bronchus OBOL:automatic bronchi basal lamina OBOL:automatic bronchi basal lamina of connective tissue OBOL:automatic bronchial trunk basal lamina OBOL:automatic bronchial trunk basal lamina of connective tissue OBOL:automatic bronchus basal lamina of connective tissue OBOL:automatic The pseudostratified ciliated epithelium that lines much of the conducting portion of the airway, including part of the nasal cavity and larynx, the trachea, and bronchi. BTO:0000419 CALOHA:TS-0023 EMAPA:32827 MA:0001480 SCTID:321764001 epithelial tissue of respiratory tract epithelium of respiratory tract respiratory tract epithelial tissue uberon airway epithelium respiratory epithelium UBERON:0004802 respiratory tract epithelium UBERON:0004802 The pseudostratified ciliated epithelium that lines much of the conducting portion of the airway, including part of the nasal cavity and larynx, the trachea, and bronchi. ISBN:0-683-40008-8 MGI:anna MP:0010942 epithelial tissue of respiratory tract OBOL:automatic epithelium of respiratory tract OBOL:automatic respiratory tract epithelial tissue OBOL:automatic airway epithelium BTO:0000419 respiratory epithelium BTO:0000419 An epithelium that is part of a respiratory system [Automatically generated definition]. CALOHA:TS-0023 EMAPA:32826 MA:0001823 apparatus respiratorius epithelial tissue apparatus respiratorius epithelium epithelial tissue of apparatus respiratorius epithelial tissue of respiratory system epithelium of apparatus respiratorius epithelium of respiratory system respiratory system epithelial tissue uberon UBERON:0004807 respiratory system epithelium UBERON:0004807 An epithelium that is part of a respiratory system [Automatically generated definition]. OBOL:automatic apparatus respiratorius epithelial tissue OBOL:automatic apparatus respiratorius epithelium OBOL:automatic epithelial tissue of apparatus respiratorius OBOL:automatic epithelial tissue of respiratory system OBOL:automatic epithelium of apparatus respiratorius OBOL:automatic epithelium of respiratory system OBOL:automatic respiratory system epithelial tissue OBOL:automatic An epithelium that is part of a digestive system [Automatically generated definition]. EMAPA:32683 MA:0001520 digestive system epithelial tissue digestive system epithelium epithelial tissue of digestive system epithelial tissue of gastrointestinal system epithelium of digestive system epithelium of gastrointestinal system gastrointestinal system epithelial tissue uberon UBERON:0004808 gastrointestinal system epithelium UBERON:0004808 An epithelium that is part of a digestive system [Automatically generated definition]. OBOL:automatic digestive system epithelial tissue OBOL:automatic digestive system epithelium OBOL:automatic epithelial tissue of digestive system OBOL:automatic epithelial tissue of gastrointestinal system OBOL:automatic epithelium of digestive system OBOL:automatic epithelium of gastrointestinal system OBOL:automatic gastrointestinal system epithelial tissue OBOL:automatic An epithelium that is part of a lower respiratory tract [Automatically generated definition]. MA:0001481 epithelial tissue of lower respiratory tract epithelium of lower respiratory tract lower respiratory tract epithelial tissue uberon UBERON:0004815 lower respiratory tract epithelium UBERON:0004815 An epithelium that is part of a lower respiratory tract [Automatically generated definition]. OBOL:automatic epithelial tissue of lower respiratory tract OBOL:automatic epithelium of lower respiratory tract OBOL:automatic lower respiratory tract epithelial tissue OBOL:automatic An epithelium that is part of a larynx [Automatically generated definition]. EHDAA2:0004065 EMAPA:35472 MA:0001765 NCIT:C49247 epithelial tissue of larynx epithelium of larynx laryngeal epithelium larynx epithelial tissue uberon UBERON:0004816 larynx epithelium UBERON:0004816 An epithelium that is part of a larynx [Automatically generated definition]. OBOL:automatic epithelial tissue of larynx OBOL:automatic epithelium of larynx OBOL:automatic laryngeal epithelium OBOL:automatic larynx epithelial tissue OBOL:automatic A portion of skeletal muscle tissue that is part of a respiratory system [Automatically generated definition]. MA:0001829 respiratory system skeletal muscle tissue skeletal muscle of apparatus respiratorius skeletal muscle of respiratory system skeletal muscle tissue of apparatus respiratorius skeletal muscle tissue of respiratory system uberon UBERON:0004830 respiratory system skeletal muscle UBERON:0004830 A portion of skeletal muscle tissue that is part of a respiratory system [Automatically generated definition]. OBOL:automatic respiratory system skeletal muscle tissue OBOL:automatic skeletal muscle of apparatus respiratorius OBOL:automatic skeletal muscle of respiratory system OBOL:automatic skeletal muscle tissue of apparatus respiratorius OBOL:automatic skeletal muscle tissue of respiratory system OBOL:automatic A portion of skeletal muscle tissue that is part of a esophagus [Automatically generated definition]. EMAPA:36523 MA:0001572 esophagus skeletal muscle tissue skeletal muscle of esophagus uberon UBERON:0004831 Most muscle tissue lining the digestive tract is smooth, but part of the externa of the esophagus is skeletal esophagus skeletal muscle UBERON:0004831 A portion of skeletal muscle tissue that is part of a esophagus [Automatically generated definition]. OBOL:automatic esophagus skeletal muscle tissue OBOL:automatic skeletal muscle of esophagus OBOL:automatic A portion of skeletal muscle tissue that is part of a lip [Automatically generated definition]. MA:0001578 lip skeletal muscle tissue skeletal muscle of lip skeletal muscle tissue of lip uberon UBERON:0004833 lip skeletal muscle UBERON:0004833 A portion of skeletal muscle tissue that is part of a lip [Automatically generated definition]. OBOL:automatic lip skeletal muscle tissue OBOL:automatic skeletal muscle of lip OBOL:automatic skeletal muscle tissue of lip OBOL:automatic An endothelium of artery that is part of a respiratory system [Automatically generated definition]. MA:0001801 apparatus respiratorius arterial endothelium apparatus respiratorius artery endothelium apparatus respiratorius endothelium of artery arterial endothelium of apparatus respiratorius arterial endothelium of respiratory system artery endothelium of apparatus respiratorius artery endothelium of respiratory system endothelium of artery of apparatus respiratorius endothelium of artery of respiratory system respiratory system artery endothelium respiratory system endothelium of artery uberon UBERON:0004848 respiratory system arterial endothelium UBERON:0004848 An endothelium of artery that is part of a respiratory system [Automatically generated definition]. OBOL:automatic apparatus respiratorius arterial endothelium OBOL:automatic apparatus respiratorius artery endothelium OBOL:automatic apparatus respiratorius endothelium of artery OBOL:automatic arterial endothelium of apparatus respiratorius OBOL:automatic arterial endothelium of respiratory system OBOL:automatic artery endothelium of apparatus respiratorius OBOL:automatic artery endothelium of respiratory system OBOL:automatic endothelium of artery of apparatus respiratorius OBOL:automatic endothelium of artery of respiratory system OBOL:automatic respiratory system artery endothelium OBOL:automatic respiratory system endothelium of artery OBOL:automatic An endothelium of vein that is part of a respiratory system [Automatically generated definition]. MA:0001811 apparatus respiratorius endothelium of vein apparatus respiratorius vein endothelium apparatus respiratorius venous endothelium endothelium of vein of apparatus respiratorius endothelium of vein of respiratory system respiratory system endothelium of vein respiratory system vein endothelium vein endothelium of apparatus respiratorius vein endothelium of respiratory system venous endothelium of apparatus respiratorius venous endothelium of respiratory system uberon UBERON:0004849 respiratory system venous endothelium UBERON:0004849 An endothelium of vein that is part of a respiratory system [Automatically generated definition]. OBOL:automatic apparatus respiratorius endothelium of vein OBOL:automatic apparatus respiratorius vein endothelium OBOL:automatic apparatus respiratorius venous endothelium OBOL:automatic endothelium of vein of apparatus respiratorius OBOL:automatic endothelium of vein of respiratory system OBOL:automatic respiratory system endothelium of vein OBOL:automatic respiratory system vein endothelium OBOL:automatic vein endothelium of apparatus respiratorius OBOL:automatic vein endothelium of respiratory system OBOL:automatic venous endothelium of apparatus respiratorius OBOL:automatic venous endothelium of respiratory system OBOL:automatic The thin layer of flat cells that line the aorta and form a barrier between circulating blood in the lumen and the rest of the vessel wall. BTO:0000394 CALOHA:TS-0047 EFO:0002597 EMAPA:35134 MA:0000701 NCIT:C49190 adult aorta endothelium endothelium of adult aorta endothelium of aorta endothelium of trunk of aortic tree endothelium of trunk of systemic arterial tree trunk of aortic tree endothelium trunk of systemic arterial tree endothelium uberon aortic endothelium UBERON:0004851 aorta endothelium UBERON:0004851 The thin layer of flat cells that line the aorta and form a barrier between circulating blood in the lumen and the rest of the vessel wall. MGI:csmith MP:0009864 adult aorta endothelium OBOL:automatic endothelium of adult aorta OBOL:automatic endothelium of aorta OBOL:automatic endothelium of trunk of aortic tree OBOL:automatic endothelium of trunk of systemic arterial tree OBOL:automatic trunk of aortic tree endothelium OBOL:automatic trunk of systemic arterial tree endothelium OBOL:automatic aortic endothelium BTO:0000394 An endothelium that is part of the cardiovascular system. BTO:0001853 EMAPA:35201 GAID:519 MA:0000717 MESH:D004730 NCIT:C13053 TAO:0002171 VHOG:0001217 XAO:0000356 ZFA:0001639 uberon UBERON:0004852 cardiovascular system endothelium UBERON:0004852 An endothelium that is part of the cardiovascular system. https://orcid.org/0000-0002-6601-2165 A connective tissue that surrounds a skeletal muscle tissue. MA:0002868 connective tissue of skeletal muscle connective tissue of skeletal muscle tissue portion of connective tissue of skeletal muscle portion of connective tissue of skeletal muscle tissue skeletal muscle portion of connective tissue skeletal muscle textus connectivus skeletal muscle tissue connective tissue skeletal muscle tissue portion of connective tissue skeletal muscle tissue textus connectivus textus connectivus of skeletal muscle textus connectivus of skeletal muscle tissue uberon skeletal muscle interstitial tissue skeletal muscle interstitum UBERON:0004857 skeletal muscle connective tissue UBERON:0004857 A connective tissue that surrounds a skeletal muscle tissue. OBOL:automatic connective tissue of skeletal muscle OBOL:automatic connective tissue of skeletal muscle tissue OBOL:automatic portion of connective tissue of skeletal muscle OBOL:automatic portion of connective tissue of skeletal muscle tissue OBOL:automatic skeletal muscle portion of connective tissue OBOL:automatic skeletal muscle textus connectivus OBOL:automatic skeletal muscle tissue connective tissue OBOL:automatic skeletal muscle tissue portion of connective tissue OBOL:automatic skeletal muscle tissue textus connectivus OBOL:automatic textus connectivus of skeletal muscle OBOL:automatic textus connectivus of skeletal muscle tissue OBOL:automatic skeletal muscle interstitial tissue MA:0002868 skeletal muscle interstitum MA:0002868 A gland that is part of a eye. The eye is a compound unit which depending on the species may consist of an eyeballs plus associated ducts and integumentary structures. Eye glands therefore include the various types of lacrimal gland, the various types of apocrine and sebaceous glands associated with the eyelid. EMAPA:35334 MA:0000267 eye-associated gland gland of eye uberon UBERON:0004859 Examples: harderian gland, accessory lacrimal gland, gland of Moll, gland of Zeis, nictitating membrane glands eye gland UBERON:0004859 A gland that is part of a eye. The eye is a compound unit which depending on the species may consist of an eyeballs plus associated ducts and integumentary structures. Eye glands therefore include the various types of lacrimal gland, the various types of apocrine and sebaceous glands associated with the eyelid. http://orcid.org/0000-0002-6601-2165 eye-associated gland http://orcid.org/0000-0002-6601-2165 gland of eye OBOL:automatic A vasculature that is part of a retina [Automatically generated definition]. FMA:76552 MESH:D012171 retina vasculature retina vasculature of camera-type eye retinal blood vessels retinal blood vessels set retinal vasculature set of blood vessels of retina set of retinal blood vessels uberon UBERON:0004864 vasculature of retina UBERON:0004864 A vasculature that is part of a retina [Automatically generated definition]. OBOL:automatic retina vasculature GO:0061298 retina vasculature of camera-type eye GO:0061298 retinal blood vessels FMA:76552 retinal blood vessels set FMA:76552 retinal vasculature OBOL:automatic set of blood vessels of retina OBOL:automatic set of retinal blood vessels FMA:76552 Layer of lateral plate mesoderm that forms the circulatory system and future gut wall - overlies endoderm[WP]. visceral mesoderm AAO:0011102 BILA:0000044 FMA:295568 Wikipedia:Lateral_plate_mesoderm#Division_into_layers XAO:0000276 inner layer of lateral plate mesoderm uberon splanchnic mesoderm UBERON:0004872 splanchnic layer of lateral plate mesoderm UBERON:0004872 Layer of lateral plate mesoderm that forms the circulatory system and future gut wall - overlies endoderm[WP]. Wikipedia:Lateral_plate_mesoderm#Division_into_layers visceral mesoderm BILA:0000044 http://www.drugs.com/dict/visceral-mesoderm.html http://www.stedmans.com/ splanchnic mesoderm ISBN:9780878932504 A structure created during embryogenesis when the lateral mesoderm splits into two layers - the inner (or splanchnic) layer adheres to the endoderm, and with it forms the splanchnopleure[WP]. EHDAA2:0001903 EHDAA:383 EMAPA:16181 FMA:295564 NCIT:C34303 VHOG:0000558 Wikipedia:Splanchnopleure uberon ventral splanchnic mesoderm UBERON:0004873 splanchnopleure UBERON:0004873 A structure created during embryogenesis when the lateral mesoderm splits into two layers - the inner (or splanchnic) layer adheres to the endoderm, and with it forms the splanchnopleure[WP]. Wikipedia:Splanchnopleure ventral splanchnic mesoderm Wikipedia:Intraembryonic_coelom A structure created during embryogenesis when the lateral mesoderm splits into two layers - the outer (or somatic) layer becomes applied to the inner surface of the ectoderm, and with it forms the somatopleure.[WP]. EHDAA2:0001847 EHDAA:381 EMAPA:16180 FMA:295566 NCIT:C34301 VHOG:0000557 Wikipedia:Somatopleure uberon UBERON:0004874 somatopleure UBERON:0004874 A structure created during embryogenesis when the lateral mesoderm splits into two layers - the outer (or somatic) layer becomes applied to the inner surface of the ectoderm, and with it forms the somatopleure.[WP]. Wikipedia:Somatopleure The central region of trunk mesoderm. This tissue forms the notochord. AAO:0000478 EFO:0003426 TAO:0000091 ZFA:0000091 axial chorda mesoderm chorda mesoderm dorsal mesoderm presumptive notochord uberon UBERON:0004880 chordamesoderm UBERON:0004880 The central region of trunk mesoderm. This tissue forms the notochord. https://orcid.org/0000-0002-6601-2165 axial chorda mesoderm ZFA:0000091 dorsal mesoderm https://github.com/obophenotype/uberon/wiki/The-neural-crest presumptive notochord ZFA:0000091 The mass of tissue made up of mesenchymal cells in the lung. EMAPA:32866 lung-associated mesenchyme mesenchyme of lung pulmonary mesenchyme uberon UBERON:0004883 lung mesenchyme UBERON:0004883 The mass of tissue made up of mesenchymal cells in the lung. GO:0060484 lung-associated mesenchyme GO:0060484 mesenchyme of lung OBOL:automatic pulmonary mesenchyme GO:0060484 A neuron projection bundle that connects the retina or its analog in the eye with the brain. This includes the vertebrate optic nerve (not truly a nerve) as well as analogous structures such as the Bolwig nerve in Drosophila. optic nerve BTO:0000966 EV:0100351 TADS:0000232 optic nerve (generic) uberon UBERON:0004904 for the vertebrate-specific structure, see UBERON:0000941 (cranial nerve II) neuron projection bundle connecting eye with brain UBERON:0004904 A neuron projection bundle that connects the retina or its analog in the eye with the brain. This includes the vertebrate optic nerve (not truly a nerve) as well as analogous structures such as the Bolwig nerve in Drosophila. http://orcid.org/0000-0002-6601-2165 optic nerve BTO:0000966 Anatomical structure that connects two or more adjacent skeletal elements or hardened body parts. joint uberon UBERON:0004905 articulation UBERON:0004905 Anatomical structure that connects two or more adjacent skeletal elements or hardened body parts. http://orcid.org/0000-0002-6601-2165 A portion of the gut that is derived from ectoderm. ectodermal gut gut ectoderm uberon UBERON:0004906 ectodermal part of digestive tract UBERON:0004906 A portion of the gut that is derived from ectoderm. GO:0007439 gut ectoderm EMAPA:32930 The region of the digestive tract extending from the mouth cavity through pharynx esophagus stomach and duodenum. FMA:49177 NCIT:C33837 SCTID:181244000 Wikipedia:Alimentary_canal#Upper_gastrointestinal_tract galen:UpperGastrointestinalTract upper GI tract upper gastrointestinal tract uberon UBERON:0004908 upper digestive tract UBERON:0004908 The region of the digestive tract extending from the mouth cavity through pharynx esophagus stomach and duodenum. Wikipedia:Alimentary_canal#Upper_gastrointestinal_tract An epithelium surrounding a gonad. EHDAA:4032 EHDAA:5931 NCIT:C32676 gonad epithelium gonadal epithelium uberon gonadal sheath UBERON:0004909 epithelium of gonad UBERON:0004909 An epithelium surrounding a gonad. OBOL:automatic gonad epithelium OBOL:automatic gonadal epithelium OBOL:automatic gonadal sheath FBbt:00004859 An epithelium surrounding an ovary. BTO:0003661 ovarian epithelium ovary epithelium uberon UBERON:0004911 epithelium of female gonad UBERON:0004911 An epithelium surrounding an ovary. OBOL:automatic ovarian epithelium OBOL:automatic ovary epithelium OBOL:automatic A proximal-distal subdivision of the digestive tract. FMA:71131 uberon alimentary system subdivision gut section intestinal tract segment of intestinal tract subdivision of alimentary system UBERON:0004921 subdivision of digestive tract UBERON:0004921 A proximal-distal subdivision of the digestive tract. http://orcid.org/0000-0002-6601-2165 alimentary system subdivision FMA:71131 gut section FBbt:00100315 subdivision of alimentary system FMA:71131 A part of a wall of an organ that forms a layer. FMA:82485 uberon UBERON:0004923 organ component layer UBERON:0004923 A part of a wall of an organ that forms a layer. http://orcid.org/0000-0002-6601-2165 The tissue underlying the tunica mucosa of the pharynx. BTO:0002113 FMA:75144 SCTID:19594009 pharyngeal submucosa pharynx submucosa uberon pharyngobasilar fascia submucous coat of pharynx submucous layer of pharynx UBERON:0004924 submucosa of pharynx UBERON:0004924 The tissue underlying the tunica mucosa of the pharynx. BTO:0002113 pharyngeal submucosa FMA:75144 pharynx submucosa OBOL:automatic submucous coat of pharynx BTO:0002113 submucous layer of pharynx BTO:0002113 A mucosa that is part of a tongue [Automatically generated definition]. EFO:0002553 FMA:54807 SCTID:362092002 lingual mucosa mucosa of organ of tongue mucous membrane of tongue organ mucosa of tongue tongue mucosa tongue mucosa of organ tongue mucous membrane tongue organ mucosa uberon UBERON:0005020 mucosa of tongue UBERON:0005020 A mucosa that is part of a tongue [Automatically generated definition]. OBOL:automatic lingual mucosa FMA:54807 mucosa of organ of tongue OBOL:automatic mucous membrane of tongue OBOL:automatic organ mucosa of tongue OBOL:automatic tongue mucosa OBOL:automatic tongue mucosa of organ OBOL:automatic tongue mucous membrane OBOL:automatic tongue organ mucosa OBOL:automatic A mucosa that is part of a lower lip [Automatically generated definition]. FMA:59833 NCIT:C12225 SCTID:362089001 lower labial mucosa lower lip mucosa lower lip mucosa of organ lower lip mucous membrane lower lip organ mucosa mucosa of organ of lower lip mucous membrane of lower lip organ mucosa of lower lip uberon UBERON:0005032 mucosa of lower lip UBERON:0005032 A mucosa that is part of a lower lip [Automatically generated definition]. OBOL:automatic lower labial mucosa UBERON:cjm lower lip mucosa OBOL:automatic lower lip mucosa of organ OBOL:automatic lower lip mucous membrane OBOL:automatic lower lip organ mucosa OBOL:automatic mucosa of organ of lower lip OBOL:automatic mucous membrane of lower lip OBOL:automatic organ mucosa of lower lip OBOL:automatic An external genitalia that is part of a female reproductive system [Automatically generated definition]. BTO:0003100 EMAPA:30984 FMA:45649 SCTID:362234008 galen:FemaleExternalGenitalia external female genital organ external genitalia of female reproductive system female external genitalia uberon organa genitalia feminina externa UBERON:0005056 TODO: Relabel. Make distinct organ class. See https://github.com/obophenotype/uberon/issues/547 external female genitalia UBERON:0005056 An external genitalia that is part of a female reproductive system [Automatically generated definition]. OBOL:automatic external female genital organ BTO:0003100 external genitalia of female reproductive system OBOL:automatic female external genitalia FMA:45649 organa genitalia feminina externa BTO:0003100 An organ that is part of a immune system [Automatically generated definition]. immune system organ uberon UBERON:0005057 immune organ UBERON:0005057 An organ that is part of a immune system [Automatically generated definition]. OBOL:automatic A gland that is part of a hemolymphoid system [Automatically generated definition]. hemopoietic or lymphoid organ EMAPA:18766 MA:0002962 hemopoietic or lymphoid gland uberon haemolymphoid system gland UBERON:0005058 hemolymphoid system gland UBERON:0005058 A gland that is part of a hemolymphoid system [Automatically generated definition]. OBOL:automatic hemopoietic or lymphoid organ GO:0048534 hemopoietic or lymphoid gland http://orcid.org/0000-0002-6601-2165 haemolymphoid system gland EMAPA:18766 The median dorsal longitudinal groove formed in the embryo by the neural plate after the appearance of the neural folds. AAO:0011071 EMAPA:35594 FMA:295624 NCIT:C34224 SCTID:361463007 Wikipedia:Neural_groove XAO:0000248 neuronames:1363 uberon UBERON:0005061 neural groove UBERON:0005061 The median dorsal longitudinal groove formed in the embryo by the neural plate after the appearance of the neural folds. GO:0001842 Wikipedia:Neural_groove http://orcid.org/0000-0002-6601-2165 One of the two elevated edges of the neural groove[GO,MP]. EHDAA2:0001249 FMA:295618 NCIT:C34223 SCTID:361461009 Wikipedia:Neural_fold XAO:0004087 neuronames:1364 medullary fold uberon UBERON:0005062 neural fold UBERON:0005062 One of the two elevated edges of the neural groove[GO,MP]. GO:0001842 MP:0011256 Wikipedia:Neural_fold medullary fold MP:0011256 A solid rod of neurectoderm derived from the neural keel. The neural rod is roughly circular in cross section. Neural rod formation occurs during primary neurulation in teleosts[GO]. An intermediate stage in the development of the central nervous system present during the segmentation period; the neural rod is roughly cylindrical in shape, forms from the neural keel, and is not yet hollowed out into the neural tube[ZFIN]. EFO:0003498 TAO:0000133 ZFA:0000133 uberon neural tube rod UBERON:0005068 neural rod UBERON:0005068 A solid rod of neurectoderm derived from the neural keel. The neural rod is roughly circular in cross section. Neural rod formation occurs during primary neurulation in teleosts[GO]. An intermediate stage in the development of the central nervous system present during the segmentation period; the neural rod is roughly cylindrical in shape, forms from the neural keel, and is not yet hollowed out into the neural tube[ZFIN]. GO:0014024 ZFA:0000133 neural tube rod GO:0014027 An anatomical boundary that adjacent_to a forebrain and adjacent_to a midbrain. EMAPA:36449 TAO:0001367 ZFA:0001367 diencephalic-mesencephalic boundary forebrain midbrain boundary forebrain-midbrain boundary region uberon UBERON:0005075 forebrain-midbrain boundary UBERON:0005075 An anatomical boundary that adjacent_to a forebrain and adjacent_to a midbrain. OBOL:automatic diencephalic-mesencephalic boundary ZFA:0001367 forebrain midbrain boundary ZFA:0001367 forebrain-midbrain boundary region EMAPA:36449 An anatomical boundary that adjacent_to a hindbrain and adjacent_to a spinal cord. hindbrain-spinal cord boundary region uberon UBERON:0005076 hindbrain-spinal cord boundary UBERON:0005076 An anatomical boundary that adjacent_to a hindbrain and adjacent_to a spinal cord. OBOL:automatic A hole in a tube[GO]. AEO:0000078 EHDAA2:0004618 RETIRED_EHDAA2:0003078 uberon UBERON:0005082 tube lumen UBERON:0005082 A hole in a tube[GO]. GO:0060609 An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm[GO]. AEO:0000218 uberon epithelial placode UBERON:0005085 ectodermal placode UBERON:0005085 An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm[GO]. GO:0060788 epithelial placode AEO:0000112 Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms[GO]. FMA:30316 musculus uberon muscle muscle element UBERON:0005090 muscle structure UBERON:0005090 Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms[GO]. GO:0061061 musculus FMA:30316 EHDAA2:0001841 EHDAA:484 EMAPA:16239 FMA:70318 VHOG:0000489 sinus venosus right horn uberon UBERON:0005092 right horn of sinus venosus UBERON:0005092 sinus venosus right horn VHOG:0000489 A bud is a protrusion that forms from an epithelial sheet by localized folding. BTO:0001639 uberon UBERON:0005153 epithelial bud UBERON:0005153 A bud is a protrusion that forms from an epithelial sheet by localized folding. GO:0060572 Any anatomical structure that is part of the reproductive system. reproductive system element reproductive system structure uberon UBERON:0005156 reproductive structure UBERON:0005156 Any anatomical structure that is part of the reproductive system. http://orcid.org/0000-0002-6601-2165 An epithelial sheet bent on a linear axis. uberon UBERON:0005157 epithelial fold UBERON:0005157 An epithelial sheet bent on a linear axis. GO:0060571 The functional tissue of the central nervous system consisting of neurons and glial cells. CNS parenchyma central nervous system parenchyma parenchyma of CNS parenchyma of central nervous system uberon UBERON:0005158 parenchyma of central nervous system UBERON:0005158 The functional tissue of the central nervous system consisting of neurons and glial cells. CL:tm https://github.com/obophenotype/uberon/issues/8 CNS parenchyma OBOL:automatic central nervous system parenchyma OBOL:automatic parenchyma of CNS OBOL:automatic A remnant structure from earlier development or evolution. Wikipedia:Vestigiality uberon UBERON:0005160 vestigial structure UBERON:0005160 A remnant structure from earlier development or evolution. PATOC:MAH A structure consisting of multiple cell components but which is not itself a cell and does not have (complete) cells as a part. AAO:0011000 CARO:0001000 FMA:83115 multi-cell-component structure multi-cell-part structure uberon cell part cluster UBERON:0005162 multi cell part structure UBERON:0005162 A structure consisting of multiple cell components but which is not itself a cell and does not have (complete) cells as a part. CARO:0001000 multi-cell-component structure CARO:0001000 multi-cell-part structure CARO:0001000 cell part cluster FMA:83115 An organ or element that is in the abdomen. Examples: spleen, intestine, kidney, abdominal mammary gland. MA:0000522 SCTID:272631008 abdomen organ uberon UBERON:0005172 abdomen element UBERON:0005172 An organ or element that is in the abdomen. Examples: spleen, intestine, kidney, abdominal mammary gland. http://orcid.org/0000-0002-6601-2165 abdomen organ MA:0000522 An organ or element that is part of the adbominal segment of the organism. This region can be further subdivided into the abdominal cavity and the pelvic region. MA:0000529 abdominal segment organ uberon UBERON:0005173 abdominal segment element UBERON:0005173 An organ or element that is part of the adbominal segment of the organism. This region can be further subdivided into the abdominal cavity and the pelvic region. http://orcid.org/0000-0002-6601-2165 abdominal segment organ MA:0000529 An organ or element that part of the dorsum of the organism. Examples: spinal cord, vertebrae, muscles of back. MA:0001901 back organ dorsal region organ uberon UBERON:0005174 dorsal region element UBERON:0005174 An organ or element that part of the dorsum of the organism. Examples: spinal cord, vertebrae, muscles of back. http://orcid.org/0000-0002-6601-2165 back organ MA:0001901 An organ or element that part of the trunk region. The trunk region can be further subdividied into thoracic (including chest and thoracic cavity) and abdominal (including abdomen and pelbis) regions. MA:0000516 trunk organ uberon UBERON:0005177 trunk region element UBERON:0005177 An organ or element that part of the trunk region. The trunk region can be further subdividied into thoracic (including chest and thoracic cavity) and abdominal (including abdomen and pelbis) regions. http://orcid.org/0000-0002-6601-2165 trunk organ MA:0000516 An organ or element that is in the thoracic cavity. Examples: lung, heart, longus colli. MA:0000557 thoracic cavity organ uberon UBERON:0005178 thoracic cavity element UBERON:0005178 An organ or element that is in the thoracic cavity. Examples: lung, heart, longus colli. http://orcid.org/0000-0002-6601-2165 thoracic cavity organ MA:0000557 An organ that part of the thoracic segment region. This region can be further subdividied chest and thoracic cavity regions. MA:0000563 uberon upper body organ UBERON:0005181 thoracic segment organ UBERON:0005181 An organ that part of the thoracic segment region. This region can be further subdividied chest and thoracic cavity regions. http://orcid.org/0000-0002-6601-2165 upper body organ MA:0000563 A vein that is part of a thorax [Automatically generated definition]. MA:0002235 NCIT:C53142 SCTID:281472008 uberon UBERON:0005194 thoracic vein UBERON:0005194 A vein that is part of a thorax [Automatically generated definition]. OBOL:automatic A gland that is part of a larynx submucosa [Automatically generated definition]. EMAPA:35475 MA:0002729 uberon laryngeal submucosa gland UBERON:0005204 larynx submucosa gland UBERON:0005204 A gland that is part of a larynx submucosa [Automatically generated definition]. OBOL:automatic laryngeal submucosa gland EMAPA:35475 An ectoderm that is part of a optic eminence [Automatically generated definition]. EHDAA:940 EMAPA:16539 RETIRED_EHDAA2:0001309 VHOG:0001105 uberon UBERON:0005234 optic eminence ectoderm UBERON:0005234 An ectoderm that is part of a optic eminence [Automatically generated definition]. OBOL:automatic EHDAA2:0001154 EMAPA:17078 VHOG:0000320 metencephalon basal plate uberon UBERON:0005239 basal plate metencephalon UBERON:0005239 metencephalon basal plate EHDAA2:0001154 An endocardium that is part of a interventricular septum [Automatically generated definition]. EHDAA2:0000886 EHDAA2:0000887 FMA:83584 VHOG:0000615 endocardium of interventricular septum uberon interventricular septum endocardial tissue UBERON:0005243 interventricular septum endocardium UBERON:0005243 An endocardium that is part of a interventricular septum [Automatically generated definition]. OBOL:automatic endocardium of interventricular septum FMA:83584 interventricular septum endocardial tissue VHOG:0000615 A myocardium that is part of a bulbus cordis [Automatically generated definition]. EMAPA:36488 VHOG:0000609 uberon bulbus cordis cardiac muscle UBERON:0005248 bulbus cordis myocardium UBERON:0005248 A myocardium that is part of a bulbus cordis [Automatically generated definition]. OBOL:automatic bulbus cordis cardiac muscle VHOG:0000609 A gland that is part of a stomodeum. VHOG:0000658 stomatodaeum gland uberon UBERON:0005250 stomatodeum gland UBERON:0005250 A gland that is part of a stomodeum. OBOL:automatic stomatodaeum gland VHOG:0000658 An anatomical cavity that is part of a yolk sac [Automatically generated definition]. EMAPA:16055 FMA:63942 VHOG:0000843 cavity of yolk sac yolk sac lumen uberon yolk sac space UBERON:0005251 yolk sac cavity UBERON:0005251 An anatomical cavity that is part of a yolk sac [Automatically generated definition]. OBOL:automatic cavity of yolk sac FMA:63942 yolk sac space FMA:63942 Portion of primordial embryonic connective tissue of the developing head, consisting of mesenchymal cells supported in interlaminar jelly, that derive mostly from the mesoderm and contribute to head connective tissue, bone and musculature in conjunction with cranial neural crest cells. EFO:0003492 EHDAA2:0000732 EHDAA:179 EMAPA:16098 EMAPA_RETIRED:16269 FMA:76622 TAO:0000113 VHOG:0000332 ZFA:0000113 cephalic mesenchyme uberon cranial mesenchyme UBERON:0005253 head mesenchyme UBERON:0005253 Portion of primordial embryonic connective tissue of the developing head, consisting of mesenchymal cells supported in interlaminar jelly, that derive mostly from the mesoderm and contribute to head connective tissue, bone and musculature in conjunction with cranial neural crest cells. ISBN:0683400088 MP:0011260 cephalic mesenchyme MP:0011260 cranial mesenchyme MGI:anna Mesenchyme that is part of a developing trunk. EFO:0003485 EHDAA2:0002092 EHDAA:377 EMAPA:16177 TAO:0000081 VHOG:0000281 ZFA:0000081 uberon trunk and cervical mesenchyme UBERON:0005256 trunk mesenchyme UBERON:0005256 Mesenchyme that is part of a developing trunk. OBOL:automatic trunk and cervical mesenchyme EHDAA2:0002092 The posterior part of the developing vertebrate hindbrain or the corresponding part of the adult brain composed of the medulla oblongata and a portion of the fourth ventricle; as well as the glossopharyngeal nerve (CN IX), vagus nerve (CN X), accessory nerve (CN XI), hypoglossal nerve (CN XII), and a portion of the vestibulocochlear nerve (CN VIII).[BTO,WP]. BTO:0000758 CALOHA:TS-0607 CALOHA:TS-2365 DHBA:10662 EHDAA2:0001207 EHDAA:5526 EMAPA:17082 HBA:9512 MA:0000205 VHOG:0000456 Wikipedia:Myelencephalon uberon myelencephalon (medulla oblongata) UBERON:0005290 myelencephalon UBERON:0005290 The posterior part of the developing vertebrate hindbrain or the corresponding part of the adult brain composed of the medulla oblongata and a portion of the fourth ventricle; as well as the glossopharyngeal nerve (CN IX), vagus nerve (CN X), accessory nerve (CN XI), hypoglossal nerve (CN XII), and a portion of the vestibulocochlear nerve (CN VIII).[BTO,WP]. BTO:0000758 Wikipedia:Myelencephalon myelencephalon (medulla oblongata) DHBA:10662 A portion of tissue that is part of an embryo. CALOHA:TS-2100 portion of embryonic tissue uberon developing tissue UBERON:0005291 embryonic tissue UBERON:0005291 A portion of tissue that is part of an embryo. OBOL:automatic portion of embryonic tissue OBOL:automatic Portion of tissue that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo. BTO:0003360 CALOHA:TS-2119 EFO:0001406 MAT:0000061 MIAA:0000061 extra-embryonic tissue uberon UBERON:0005292 extraembryonic tissue UBERON:0005292 Portion of tissue that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo. https://orcid.org/0000-0002-6601-2165 The endothelial lining of the endocardium. FMA:83596 endocardium endothelium endothelium of endocardium uberon UBERON:0005316 endocardial endothelium UBERON:0005316 The endothelial lining of the endocardium. UBERON:cjm endocardium endothelium FMA:83596 endothelium of endocardium FMA:83596 An pulmonary artery endothelium is an epithelium that lines the pulmonary artery[GO]. BTO:0000137 pulmonary artery endothelial tube uberon UBERON:0005317 pulmonary artery endothelium UBERON:0005317 An pulmonary artery endothelium is an epithelium that lines the pulmonary artery[GO]. GO:0061155 pulmonary artery endothelial tube GO:0061155 A lamina propria that is part of a mucosa of oral region. EMAPA:26947 lamina propria of oral mucosa uberon UBERON:0005334 oral lamina propria UBERON:0005334 A lamina propria that is part of a mucosa of oral region. OBOL:automatic A ventricular outflow tract is a portion of either the left ventricle or right ventricle of the heart through which blood passes in order to enter the great arteries. The right ventricular outflow tract (RVOT) is an infundibular extension of the ventricular cavity which connects to the pulmonary artery. The left ventricular outflow tract (LVOT), which connects to the aorta, is nearly indistinguishable from the rest of the ventricle[WP]. FMA:13225 Wikipedia:Ventricular_outflow_tract XAO:0004140 heart ventricle outflow tract outflow part of ventricle ventricular outflow tract uberon UBERON:0005337 outflow tract of ventricle UBERON:0005337 A ventricular outflow tract is a portion of either the left ventricle or right ventricle of the heart through which blood passes in order to enter the great arteries. The right ventricular outflow tract (RVOT) is an infundibular extension of the ventricular cavity which connects to the pulmonary artery. The left ventricular outflow tract (LVOT), which connects to the aorta, is nearly indistinguishable from the rest of the ventricle[WP]. Wikipedia:Ventricular_outflow_tract heart ventricle outflow tract MP:0010224 ventricular outflow tract Wikipedia:Ventricular_outflow_tract An outflow tract that is part of a aorta. EHDAA2:0001353 EMAPA:17329 MA:0000101 VHOG:0001394 uberon UBERON:0005338 outflow tract aortic component UBERON:0005338 An outflow tract that is part of a aorta. OBOL:automatic EHDAA2:0001359 EHDAA:4401 EMAPA:17330 MA:0000102 VHOG:0001395 uberon UBERON:0005339 outflow tract pulmonary component UBERON:0005339 The outer neural tube region in which post-mitotic neuroblasts migrate along radial glia to form the adult cortical layers[MP]. BAMS:CTXpl DHBA:10515 EMAPA:32711 MBA:695 PBA:294021914 neuronames:2702 cerebral cortex cortical plate future cortical layers II-VI neocortex cortical plate uberon future neocortex UBERON:0005343 cortical plate UBERON:0005343 The outer neural tube region in which post-mitotic neuroblasts migrate along radial glia to form the adult cortical layers[MP]. MP:0008439 http://www.ncbi.nlm.nih.gov/books/NBK10047 future cortical layers II-VI http://orcid.org/0000-0002-6601-2165 future neocortex http://orcid.org/0000-0002-6601-2165 The group of sensory neuron cell bodies associated with the vagus nerve. gX EMAPA:16798 FMA:53472 MA:0001081 SCTID:244452001 TAO:0007067 VHOG:0000684 Wikipedia:Vagus_ganglion ZFA:0007067 ganglion of vagus nerve right glossopharyngeal ganglion vagal ganglion vagus ganglion vagus neural ganglion uberon vagus X UBERON:0005362 vagus X ganglion UBERON:0005362 The group of sensory neuron cell bodies associated with the vagus nerve. ISBN:0-683-40008-8 MP:0001100 gX ZFA:0007067 ganglion of vagus nerve FMA:53472 right glossopharyngeal ganglion FMA:53472 vagal ganglion ZFA:0007067 vagus neural ganglion FMA:53472 vagus X EMAPA:16798 An array of photoreceptors and any supporting cells found in an eye. light-sensitive tissue uberon UBERON:0005388 photoreceptor array UBERON:0005388 An array of photoreceptors and any supporting cells found in an eye. https://orcid.org/0000-0002-6601-2165 A transparent structure that is part of a visual sense organ, the function of which is to direct or focus light onto a photoreceptor array. lens uberon UBERON:0005389 transparent eye structure UBERON:0005389 A transparent structure that is part of a visual sense organ, the function of which is to direct or focus light onto a photoreceptor array. http://orcid.org/0000-0002-6601-2165 One of: the common carotid artery, or its branches, the external and internal carotid arteries. AAO:0010217 BTO:0000168 CALOHA:TS-0116 EFO:0000818 EHDAA:6385 EMAPA:18609 EV:0100379 FMA:70504 GAID:478 MA:0001925 MAT:0000501 MESH:D002339 NCIT:C12687 SCTID:362040006 SCTID:69105007 TAO:0000097 VHOG:0000266 Wikipedia:Carotid_artery ZFA:0000097 galen:CarotidArtery carotid carotid artery subdivision of common carotid artery uberon common carotid arterial subdivision UBERON:0005396 carotid artery segment UBERON:0005396 One of: the common carotid artery, or its branches, the external and internal carotid arteries. Wikipedia:Carotid_artery https://sourceforge.net/tracker/?func=detail&aid=3486870&group_id=76834&atid=994764 carotid AAO:0010217 carotid artery MA:0001925 subdivision of common carotid artery FMA:70504 common carotid arterial subdivision FMA:70504 A sex gland that is part of a female reproductive system. BTO:0000254 MA:0000383 uberon UBERON:0005398 female reproductive gland UBERON:0005398 A sex gland that is part of a female reproductive system. OBOL:automatic A gray matter that is part of a cerebral hemisphere. BTO:0000823 CALOHA:TS-2361 FMA:61821 MA:0000944 cerebral gray matter cerebral grey matter cerebral hemisphere grey matter uberon UBERON:0005401 cerebral hemisphere gray matter UBERON:0005401 A gray matter that is part of a cerebral hemisphere. OBOL:automatic cerebral gray matter BTO:0000823 cerebral grey matter MA:0000944 The part of the digestive system that excludes the hepatobiliary system. BTO:0000058 CALOHA:TS-0407 EHDAA2:0000110 EHDAA:514 EMAPA:16246 FMA:71132 GAID:294 MA:0000323 MESH:D041981 NCIT:C12378 SCTID:373871007 VHOG:0000412 galen:GastrointestinalTract uberon GI tract alimentary system alimentary tract gastro-intestinal system gastroenterological system gastrointestinal (GI) tract gastrointestinal system UBERON:0005409 alimentary part of gastrointestinal system UBERON:0005409 The part of the digestive system that excludes the hepatobiliary system. http://orcid.org/0000-0002-6601-2165 GI tract GAID:294 alimentary system MA:0000323 alimentary tract MA:0000323 gastro-intestinal system FMA:71132 gastroenterological system UBERON:cjm gastrointestinal (GI) tract GAID:294 gastrointestinal system FMA:71132 A limb bud that develops into a forelimb or pectoral fin. EFO:0003430 TAO:0000141 VHOG:0001754 VHOG_RETIRED:0001259 ZFA:0000141 forelimb - pectoral fin bud uberon pectoral fin bud UBERON:0005419 at this time we have no need to name a more specific 'pectoral fin bud' class, but we may in future pectoral appendage bud UBERON:0005419 A limb bud that develops into a forelimb or pectoral fin. OBOL:automatic forelimb - pectoral fin bud VHOG:0001754 pectoral fin bud TAO:0000141 An apical ectodermal ridge that is part of a pectoral appendage bud. EFO:0003487 EHDAA2:0000138 EMAPA:16778 TAO:0000085 TAO:0000736 VHOG:0001064 ZFA:0000085 AER forelimb apical ectodermal ridge forelimb apical ectodermal ridge pectoral fin bud upper limb bud apical ectodermal ridge uberon aer pectoral fin apical ectodermal ridge pectoral fin apical fold pectoral fin UBERON:0005421 pectoral appendage apical ectodermal ridge UBERON:0005421 An apical ectodermal ridge that is part of a pectoral appendage bud. OBOL:automatic AER forelimb VHOG:0001064 apical ectodermal ridge forelimb VHOG:0001064 apical ectodermal ridge pectoral fin bud ZFA:0000085 upper limb bud apical ectodermal ridge EHDAA2:0000138 aer pectoral fin TAO:0000085 apical ectodermal ridge pectoral fin TAO:0000085 apical fold pectoral fin TAO:0000085 AEO:0000125 CALOHA:TS-2122 EHDAA2:0003125 FMA:292313 MIAA:0000019 uberon developing structure developmental structure developmental tissue UBERON:0005423 developing anatomical structure UBERON:0005423 developmental tissue MIAA:0000019 Portion of tissue that is the inner layer of the optic cup and will become the neural retina. EHDAA2:0001304 EMAPA:16675 TAO:0001071 VHOG:0000490 ZFA:0001071 future neural retina future retinal neural layer inner layer optic cup optic cup inner layer uberon future NR future neural epithelium future neural layer presumptive retina UBERON:0005425 presumptive neural retina UBERON:0005425 Portion of tissue that is the inner layer of the optic cup and will become the neural retina. ZFIN:curator inner layer optic cup ZFA:0001071 optic cup inner layer EHDAA2:0001304 future neural epithelium EMAPA:16675 future neural layer EMAPA:16675 presumptive retina TAO:0001071 Portion of tissue that gives rise to the lens. EHDAA2:0000983 EHDAA:4737 EMAPA:17163 SCTID:361510002 TAO:0002205 VHOG:0001163 ZFA:0001679 uberon immature lens lens mass presumptive lens UBERON:0005426 lens vesicle UBERON:0005426 Portion of tissue that gives rise to the lens. ZFIN:curator https://sourceforge.net/tracker/?func=detail&atid=994726&aid=3514998&group_id=76834 immature lens ZFA:0001679 lens mass ZFA:0001679 ZFIN:ZDB-PUB-091023-49 presumptive lens ZFA:0001679 Portion of tissue that is part of the eye and gives rise to the mature, fully layered cornea. TAO:0002188 ZFA:0001688 uberon UBERON:0005427 corneal primordium UBERON:0005427 Portion of tissue that is part of the eye and gives rise to the mature, fully layered cornea. ZFIN:ZDB-PUB-061010-3 Vagal neural crest is adjacent to the first seven somites gives rise to both ganglionic and ectomesenchymal derivatives[ZFA]. EHDAA2:0002156 EHDAA:669 TAO:0000818 VHOG:0001208 XAO:0004191 ZFA:0000818 uberon enteric neural crest post-otic neural crest UBERON:0005428 vagal neural crest UBERON:0005428 Vagal neural crest is adjacent to the first seven somites gives rise to both ganglionic and ectomesenchymal derivatives[ZFA]. ZFIN:curator post-otic neural crest ZFA:0000818 The dilated structure that is lined by endothelial cells and located at the arterial pole of the heart just above (distal to) the truncus arteriosus in mammalian embryos; it is the primordial vascular channel from which the aortic arches (and eventually the dorsal aortae) arise; the aortic sac is homologous to the ventral aorta of gill-bearing vertebrates. EHDAA2:0004145 EHDAA:9826 EMAPA:36461 FMA:71008 RETIRED_EHDAA2:0000133 SCTID:361527005 uberon UBERON:0005432 aortic sac UBERON:0005432 The dilated structure that is lined by endothelial cells and located at the arterial pole of the heart just above (distal to) the truncus arteriosus in mammalian embryos; it is the primordial vascular channel from which the aortic arches (and eventually the dorsal aortae) arise; the aortic sac is homologous to the ventral aorta of gill-bearing vertebrates. MP:0012510 FMA:24219 SCTID:123958008 cervical region neck subdivision region of neck subdivision of neck uberon UBERON:0005434 cervical region UBERON:0005434 cervical region FMA:24219 neck subdivision FMA:24219 region of neck FMA:24219 subdivision of neck FMA:24219 The jugular foramen is a large aperture in the base of the skull. It is located behind the carotid canal and is formed in front by the petrous portion of the temporal, and behind by the occipital; it is generally larger on the right than on the left side. AAO:0000249 EHDAA2:0000893 EHDAA:10631 EMAPA:18713 FMA:56432 NCIT:C12496 SCTID:361735006 VHOG:0001113 Wikipedia:Jugular_foramen Posterior lacerate foramen uberon foramen jugulare UBERON:0005456 jugular foramen UBERON:0005456 The jugular foramen is a large aperture in the base of the skull. It is located behind the carotid canal and is formed in front by the petrous portion of the temporal, and behind by the occipital; it is generally larger on the right than on the left side. Wikipedia:Jugular_foramen Posterior lacerate foramen FMA:56432 foramen jugulare Wikipedia:Jugular_foramen A vitelline vein that is in the left side of a multicellular organism. EHDAA2:0000971 EMAPA:16380 EMAPA:16698 FMA:70307 SCTID:361446008 uberon UBERON:0005460 left vitelline vein UBERON:0005460 A vitelline vein that is in the left side of a multicellular organism. OBOL:automatic A vitelline vein that is in the right side of a multicellular organism. EHDAA2:0001766 EMAPA:16381 EMAPA:16699 FMA:70306 SCTID:361445007 uberon UBERON:0005472 right vitelline vein UBERON:0005472 A vitelline vein that is in the right side of a multicellular organism. OBOL:automatic A longitudinal groove in the neural tube wall that divides the neural tube into dorsal (alar) and ventral (basal) halves (dorsal receives input from sensory neurons, ventral effects motor functions); stretches from the mesencephalon caudad[TMD]. sulcus limitans BAMS:slim BAMS:slm neuronames:629 neural tube lateral wall sulcus limitans uberon UBERON:0005478 sulcus limitans of neural tube UBERON:0005478 A longitudinal groove in the neural tube wall that divides the neural tube into dorsal (alar) and ventral (basal) halves (dorsal receives input from sensory neurons, ventral effects motor functions); stretches from the mesencephalon caudad[TMD]. http://medical-dictionary.thefreedictionary.com/Sulcus+limitans http://www.ncbi.nlm.nih.gov/books/NBK10047 neural tube lateral wall sulcus limitans EHDAA2:0001265 The paired veins that carry blood from the yolk sac back to the embryo. EMAPA:36021 FMA:70305 NCIT:C34329 RETIRED_EHDAA2:0002209 SCTID:2730004 SCTID:308832003 VHOG:0000401 Wikipedia:Vitelline_veins XAO:0000376 XAO:0004147 embryonic vitelline vein vascular vitelline network uberon omphalomesenteric vein vein of omphalomesenteric system UBERON:0005487 vitelline vein UBERON:0005487 The paired veins that carry blood from the yolk sac back to the embryo. MGI:csmith MP:0010666 embryonic vitelline vein VHOG:0000401 vascular vitelline network XAO:0004147 omphalomesenteric vein EMAPA:16244 Cranial neural crest which gives rise to the glossopharyngeal ganglion. EHDAA2:0000714 EHDAA:660 TAO:0007066 ZFA:0007066 uberon UBERON:0005491 glossopharyngeal neural crest UBERON:0005491 Cranial neural crest which gives rise to the glossopharyngeal ganglion. ZFA:0007066 Portion of tissue on the side of the lumen of the neural tube. EHDAA2:0001257 EHDAA:2873 EHDAA:912 EMAPA:16166 TAO:0001435 VHOG:0000513 ZFA:0001435 lateral wall neural tube uberon UBERON:0005496 neural tube lateral wall UBERON:0005496 Portion of tissue on the side of the lumen of the neural tube. ZFA:0001435 lateral wall neural tube ZFA:0001435 EFO:0003643 EHDAA:257 EMAPA:16074 RETIRED_EHDAA2:0001273 TAO:0001178 VHOG:0001372 XAO:0004091 ZFA:0001178 non neural ectoderm epidermal ectoderm epithelial ectoderm uberon surface ectoderm ventral ectoderm UBERON:0005497 Gene notes: One of the first genes to be expressed in nonneural ectoderm in amphioxus is BMP2/4 (Panopoulou et al. 1998). BMP2/4 homologues appear to have a very ancient role in distinguishing neural from nonneural ectoderm; in Drosophila as well as in amphioxus and vertebrates, BMP2/4 homologues are expressed in nonneural ectoderm and function in distinguishing neural from nonneural ectoderm (Francois & Bier, 1995 ; Sasai et al. 1995 ; Wilson & Hemmati-Brivanlou, 1995; Panopoulou et al. 1998). A change in level of BMP2/4 from very high in nonneural ectoderm to low in neural ectoderm appears to be a key factor in development of neural crest (Baker & Bronner-Fraser,1997a,1997b;Erickson&Reedy,1998;Marchantet al.1998 ;Selleck et al. 1998). non-neural ectoderm UBERON:0005497 non neural ectoderm ZFA:0001178 epidermal ectoderm https://github.com/obophenotype/uberon/wiki/The-neural-crest epithelial ectoderm https://github.com/obophenotype/uberon/wiki/The-neural-crest surface ectoderm https://github.com/obophenotype/uberon/wiki/The-neural-crest ventral ectoderm ZFA:0001178 Multi-tissue structure that arises from the heart rudiment and will become the heart tube. EHDAA2:0001512 EHDAA:424 EHDAA:436 EMAPA:16215 FMA:321916 SCTID:361522004 TAO:0000149 Wikipedia:Primitive_heart_tube ZFA:0000149 primitive heart tube early primitive heart tube uberon UBERON:0005498 primitive heart tube UBERON:0005498 Multi-tissue structure that arises from the heart rudiment and will become the heart tube. ZFA:0000149 primitive heart tube EMAPA:16215 early primitive heart tube EMAPA:16208 A neural tube lateral wall that is part of a rhombomere. EMAPA:32819 EMAPA:35364 uberon future hindbrain lateral wall UBERON:0005501 rhombomere lateral wall UBERON:0005501 A neural tube lateral wall that is part of a rhombomere. OBOL:automatic future hindbrain lateral wall EMAPA:35364 Cranial neural crest which gives rise to the trigeminal ganglion. EFO:0003484 EHDAA2:0002083 EHDAA:667 EMAPA:16170 TAO:0000080 VHOG:0000269 ZFA:0000080 uberon UBERON:0005563 trigeminal neural crest UBERON:0005563 Cranial neural crest which gives rise to the trigeminal ganglion. ZFA:0000080 Portion of tissue that gives rise to the immature gonad. EFO:0003651 EHDAA:5927 EMAPA:17204 RETIRED_EHDAA2:0002148 TAO:0001262 WBbt:0008366 ZFA:0001262 future gonad gonadal primordium primitive gonad undifferentiated gonad uberon immature gonad UBERON:0005564 gonad primordium UBERON:0005564 Portion of tissue that gives rise to the immature gonad. ZFA:0001262 future gonad http://orcid.org/0000-0002-6601-2165 gonadal primordium ZFA:0001262 primitive gonad http://orcid.org/0000-0002-6601-2165 undifferentiated gonad ZFA:0001262 immature gonad http://orcid.org/0000-0002-6601-2165 Somite located in the head region, caudal to the otic vesicle. EHDAA2:0003437 EMAPA:16172 XAO:0000313 occipital somite uberon cranial somite UBERON:0005594 head somite UBERON:0005594 Somite located in the head region, caudal to the otic vesicle. PMID:11830559 occipital somite PMID:11830559 XAO:0000313 cranial somite XAO:0000313 A pair of lateral diverticula just over the liver rudiment representing the primordia of the lungs, formed by the floor of the foregut just anterior to the liver diverticulum. AAO:0011059 EFO:0002578 EMAPA:36007 XAO:0001002 uberon lateral diverticula lung diverticulum lung endoderm UBERON:0005597 lung primordium UBERON:0005597 A pair of lateral diverticula just over the liver rudiment representing the primordia of the lungs, formed by the floor of the foregut just anterior to the liver diverticulum. XAO:0001002 lateral diverticula XAO:0001002 lung diverticulum AAO:3010717 lung endoderm EFO:0002578 A somite that is part of a trunk. AAO:0010385 EHDAA2:0003438 EMAPA:16184 XAO:0000314 uberon UBERON:0005598 trunk somite UBERON:0005598 A somite that is part of a trunk. OBOL:automatic EHDAA2:0000936 EHDAA:404 EMAPA:16205 MA:0000478 SCTID:361403005 VHOG:0000484 uberon UBERON:0005613 left dorsal aorta UBERON:0005613 A layer of cuboidal epithelial cells bounded anteriorly by the capsule of the lens and posteriorly by the lens cortex. lens epithelium EHDAA2:0000984 EHDAA:9059 EMAPA:17304 EMAPA:17839 FMA:70612 MA:0001302 NCIT:C33641 RETIRED_EHDAA2:0000976 SCTID:362521008 VHOG:0001425 lens subcapsular epithelium subcapsular lens epithelium uberon anterior epithelium of lens vesicle anterior surface of lens UBERON:0005614 lens anterior epithelium UBERON:0005614 A layer of cuboidal epithelial cells bounded anteriorly by the capsule of the lens and posteriorly by the lens cortex. http://orcid.org/0000-0002-6601-2165 lens subcapsular epithelium http://www.lab.anhb.uwa.edu.au/mb140/corepages/eye/eye.htm subcapsular lens epithelium FMA:70612 anterior epithelium of lens vesicle EMAPA:17304 anterior surface of lens FMA:58889 EHDAA2:0001720 EHDAA:406 EMAPA:16206 MA:0000479 SCTID:361404004 VHOG:0000485 uberon UBERON:0005622 right dorsal aorta UBERON:0005622 Intrinsic membrane that arises from embryonic germ layers and grow to surround the developing embryo. EHDAA2:0004714 FMA:305915 SCTID:362840007 uberon UBERON:0005631 extraembryonic membrane UBERON:0005631 Intrinsic membrane that arises from embryonic germ layers and grow to surround the developing embryo. ISBN:0073040584 An epithelium that is part of a anterior chamber of eyeball. EHDAA2:0000130 uberon UBERON:0005638 anterior chamber epithelium UBERON:0005638 An epithelium that is part of a anterior chamber of eyeball. OBOL:automatic An epithelium that is part of a lens vesicle. EHDAA2:0000987 EMAPA:17165 VHOG:0000532 uberon UBERON:0005656 lens vesicle epithelium UBERON:0005656 An epithelium that is part of a lens vesicle. OBOL:automatic An ectoderm that is part of a pharyngeal arch 2. EHDAA2:0000055 EMAPA:16277 EMAPA:16397 EMAPA:16398 RETIRED_EHDAA2:0000064 VHOG:0001062 2nd pharyngeal arch ectoderm uberon UBERON:0005660 2nd arch ectoderm UBERON:0005660 An ectoderm that is part of a pharyngeal arch 2. OBOL:automatic 2nd pharyngeal arch ectoderm VHOG:0001062 An ectoderm that is part of a pharyngeal arch 3. EHDAA2:0000072 EMAPA:16400 EMAPA:16582 EMAPA:16584 RETIRED_EHDAA2:0000079 VHOG:0000946 3rd pharyngeal arch ectoderm uberon UBERON:0005661 3rd arch ectoderm UBERON:0005661 An ectoderm that is part of a pharyngeal arch 3. OBOL:automatic 3rd pharyngeal arch ectoderm VHOG:0000946 An ectoderm that is part of a pharyngeal arch 4. EHDAA2:0004032 EMAPA:16762 EMAPA:16764 EMAPA:16768 RETIRED_EHDAA2:0000094 VHOG:0001095 4th pharyngeal arch ectoderm uberon UBERON:0005662 4th arch ectoderm UBERON:0005662 An ectoderm that is part of a pharyngeal arch 4. OBOL:automatic 4th pharyngeal arch ectoderm VHOG:0001095 An endoderm that is part of a pharyngeal arch 2. EHDAA2:0000061 EMAPA:16274 EMAPA:16276 EMAPA:16278 RETIRED_EHDAA2:0000065 VHOG:0001108 2nd pharyngeal arch endoderm uberon UBERON:0005664 2nd arch endoderm UBERON:0005664 An endoderm that is part of a pharyngeal arch 2. OBOL:automatic 2nd pharyngeal arch endoderm VHOG:0001108 An endoderm that is part of a pharyngeal arch 3. EHDAA2:0000075 EMAPA:16401 EMAPA:16585 EMAPA:16587 RETIRED_EHDAA2:0000080 VHOG:0001081 3rd pharyngeal arch endoderm uberon UBERON:0005665 3rd arch endoderm UBERON:0005665 An endoderm that is part of a pharyngeal arch 3. OBOL:automatic 3rd pharyngeal arch endoderm VHOG:0001081 An endoderm that is part of a pharyngeal arch 4. EHDAA2:0004033 EMAPA:16765 EMAPA:16767 EMAPA:16769 RETIRED_EHDAA2:0000095 VHOG:0001092 4th pharyngeal arch endoderm uberon UBERON:0005666 4th arch endoderm UBERON:0005666 An endoderm that is part of a pharyngeal arch 4. OBOL:automatic 4th pharyngeal arch endoderm VHOG:0001092 A mesothelium that is part of a peritoneal cavity. BTO:0003156 EHDAA2:0001447 EMAPA:16139 FMA:18147 SCTID:34073007 mesothelium of peritoneal component mesothelium of peritoneum peritoneal mesothelium peritoneum mesothelium uberon UBERON:0005669 peritoneal cavity mesothelium UBERON:0005669 A mesothelium that is part of a peritoneal cavity. OBOL:automatic mesothelium of peritoneal component EMAPA:16139 mesothelium of peritoneum FMA:18147 peritoneal mesothelium BTO:0003156 EMAPA:16139 peritoneum mesothelium FMA:18147 An endothelium that is part of a right lung. EHDAA2:0001755 uberon UBERON:0005672 right lung endothelium UBERON:0005672 An endothelium that is part of a right lung. OBOL:automatic An endothelium that is part of a left lung. EHDAA2:0000961 uberon UBERON:0005673 left lung endothelium UBERON:0005673 An endothelium that is part of a left lung. OBOL:automatic An anatomical cavity that is part of a lens vesicle. cavity of lens lens cavity EHDAA2:0000986 EMAPA:17164 VHOG:0000531 cavity of lens vesicle uberon UBERON:0005688 lens vesicle cavity UBERON:0005688 An anatomical cavity that is part of a lens vesicle. OBOL:automatic lens cavity EHDAA2:0000986 cavity of lens vesicle EMAPA:17164 Mesenchyme that is part of a pharyngeal arch 2. EHDAA2:0000066 EHDAA:625 EMAPA:16279 FMA:295698 VHOG:0001102 2nd pharyngeal arch mesenchyme uberon 2nd branchial arch mesenchyme pharyngeal arch 2 mesenchyme UBERON:0005689 2nd arch mesenchyme UBERON:0005689 Mesenchyme that is part of a pharyngeal arch 2. OBOL:automatic 2nd pharyngeal arch mesenchyme VHOG:0001102 Mesenchyme that is part of a pharyngeal arch 3. EHDAA2:0000081 EHDAA:1094 EMAPA:16402 FMA:295700 VHOG:0001083 3rd pharyngeal arch mesenchyme uberon 3rd branchial arch mesenchyme pharyngeal arch 3 mesenchyme UBERON:0005690 3rd arch mesenchyme UBERON:0005690 Mesenchyme that is part of a pharyngeal arch 3. OBOL:automatic 3rd pharyngeal arch mesenchyme VHOG:0001083 Mesenchyme that is part of a pharyngeal arch 4. EHDAA2:0000096 EHDAA:1677 EMAPA:16770 FMA:295702 VHOG:0001052 4th pharyngeal arch mesenchyme uberon 4th branchial arch mesenchyme pharyngeal arch 4 mesenchyme UBERON:0005691 4th arch mesenchyme UBERON:0005691 Mesenchyme that is part of a pharyngeal arch 4. OBOL:automatic 4th pharyngeal arch mesenchyme VHOG:0001052 Mesenchyme that is part of a optic eminence. EHDAA:942 EMAPA:16324 RETIRED_EHDAA2:0001310 VHOG:0001073 uberon UBERON:0005702 optic eminence mesenchyme UBERON:0005702 Mesenchyme that is part of a optic eminence. OBOL:automatic A venous system that is part of a hindbrain. EHDAA2:0000776 EMAPA:18632 VHOG:0001322 uberon rhombencephalon venous system UBERON:0005720 hindbrain venous system UBERON:0005720 A venous system that is part of a hindbrain. OBOL:automatic rhombencephalon venous system VHOG:0001322 BILA:0000139 uberon UBERON:0005726 chemosensory system UBERON:0005726 EHDAA2:0000474 EMAPA:31862 EMAPA:31863 FMA:296719 VHOG:0000616 extra-embryonic mesoderm extraembryonic mesenchyme uberon UBERON:0005728 extraembryonic mesoderm UBERON:0005728 A limb/fin field that has the potential to develop into a pectoral appendage bud mesenchyme. TAO:0001453 ZFA:0001453 pectoral appendage field of lateral plate mesoderm uberon UBERON:0005729 pectoral appendage field UBERON:0005729 A limb/fin field that has the potential to develop into a pectoral appendage bud mesenchyme. OBOL:automatic A ring of cells capable of forming a limb or paired fin[Gilbert,modified]. limb/fin field of lateral plate mesoderm paired limb/fin field uberon UBERON:0005732 paired limb/fin field UBERON:0005732 A ring of cells capable of forming a limb or paired fin[Gilbert,modified]. ISBN:9780878932504 The outermost layer of a blood vessel, composed mainly of fibrous tissue. BTO:0002010 EMAPA:36299 NCIT:C33818 SCTID:61066005 Wikipedia:Tunica_externa_(vessels) adventitia externa tunica adventitia tunica adventitia of vessel uberon external coat UBERON:0005734 tunica adventitia of blood vessel UBERON:0005734 The outermost layer of a blood vessel, composed mainly of fibrous tissue. ISBN:0073040584 Wikipedia:Tunica_externa_(vessels) adventitia externa Wikipedia:Tunica_externa_(vessels) tunica adventitia Wikipedia:Tunica_externa_(vessels) tunica adventitia of vessel Wikipedia:Tunica_externa_(vessels) external coat Wikipedia:Tunica_externa_(vessels) A tunica intima that is part of a artery. EMAPA:36293 EV:0100028 FMA:14272 SCTID:40022005 galen:IntimaOfArtery arterial intima tunica interna (intima)(arteriae) uberon UBERON:0005740 tunica intima of artery UBERON:0005740 A tunica intima that is part of a artery. OBOL:automatic arterial intima EV:0100028 tunica interna (intima)(arteriae) FMA:14272 An outermost connective tissue covering of an organ, vessel, or other structure[WP]. BTO:0002010 FMA:45635 SCTID:30180000 Wikipedia:Adventitia tunica advetitia tunica externa uberon UBERON:0005742 adventitia UBERON:0005742 An outermost connective tissue covering of an organ, vessel, or other structure[WP]. Wikipedia:Adventitia tunica advetitia Wikipedia:Adventitia tunica externa FMA:45635 Anatomical space that is an opening in a bone, usually for passage of blood vessels or nerves. foramen AAO:0010438 TAO:0001736 VHOG:0001760 ZFA:0005386 uberon UBERON:0005744 bone foramen UBERON:0005744 Anatomical space that is an opening in a bone, usually for passage of blood vessels or nerves. TAO:curator foramen ZFA:0005386 An acellular anatomical structure that is the bounding layer of a anatomical structure. FMA:63871 uberon UBERON:0005764 acellular membrane UBERON:0005764 An acellular anatomical structure that is the bounding layer of a anatomical structure. OBOL:automatic An acellular membrane that is part of the epithelium, lies adjacent to the epithelial cells, and is the fusion of the the basal lamina and the reticular lamina. AAO:0010596 FMA:63872 GAID:915 NCIT:C13191 SCTID:68989006 Wikipedia:Basement_membrane basement membrane of connective tissue uberon basement membrane UBERON:0005769 basement membrane of epithelium UBERON:0005769 An acellular membrane that is part of the epithelium, lies adjacent to the epithelial cells, and is the fusion of the the basal lamina and the reticular lamina. Wikipedia:Basement_membrane http://orcid.org/0000-0002-6601-2165 basement membrane of connective tissue FMA:63872 basement membrane FMA:63872 Any portion of the aorta including the ascending and descending aorta, and aortic arch or a portion of the aortic orifice of the left ventricle. FMA:13087 NCIT:C34027 SCTID:119203005 aortic section uberon aortic segment portion of aorta segment of aorta UBERON:0005800 section of aorta UBERON:0005800 Any portion of the aorta including the ascending and descending aorta, and aortic arch or a portion of the aortic orifice of the left ventricle. ncithesaurus:Aortic_Segment aortic segment FMA:13087 segment of aorta FMA:13087 The dorsal aorta is a blood vessel in a single-pass circulatory system that carries oxygenated blood from the gills to the rest of the body. In a single-pass circulatory system blood passes once through the heart to supply the body once. AAO:0011029 BTO:0004673 EHDAA:402 EMAPA:18606 SCTID:338637006 TAO:0000014 VHOG:0000264 Wikipedia:Dorsal_aorta XAO:0000051 ZFA:0000014 DA uberon dorsal aorta root dorsal aortic root UBERON:0005805 dorsal aorta UBERON:0005805 The dorsal aorta is a blood vessel in a single-pass circulatory system that carries oxygenated blood from the gills to the rest of the body. In a single-pass circulatory system blood passes once through the heart to supply the body once. GO:0035907 https://sourceforge.net/p/geneontology/ontology-requests/8525/ DA ZFA:0000014 dorsal aorta root VHOG:0000264 dorsal aortic root VHOG:0000264 A fascicle that is part of a spinal cord. FMA:75799 spinal cord fasciculus uberon UBERON:0005837 fasciculus of spinal cord UBERON:0005837 A fascicle that is part of a spinal cord. OBOL:automatic spinal cord fasciculus FMA:75799 A fascicle that is part of a brain. FMA:83844 brain fasciculus uberon UBERON:0005838 fasciculus of brain UBERON:0005838 A fascicle that is part of a brain. OBOL:automatic brain fasciculus FMA:83844 BIRNLEX:2665 FMA:62420 MA:0003080 SCTID:278748001 axial part of spinal cord axial regional part of spinal cord segment of spinal cord uberon UBERON:0005844 spinal cord segment UBERON:0005844 axial part of spinal cord BIRNLEX:2665 axial regional part of spinal cord BIRNLEX:2665 segment of spinal cord FMA:62420 A delimited region of dense mesenchyme within looser mesenchyme. AEO:0000148 EHDAA2_RETIRED:0003148 EHDAA:8979 mesenchyme condensation uberon UBERON:0005856 developing mesenchymal condensation UBERON:0005856 A delimited region of dense mesenchyme within looser mesenchyme. AEO:0000148 mesenchyme condensation EMAPA:25351 Cell condensation that is an aggregation of mesenchymal cells that are committed to differentiate into chondroblasts and chondrocytes. AEO:0000147 EHDAA2_RETIRED:0003147 EMAPA:32731 VSAO:0000092 XAO:0004022 cartilage condensation cartilagenous condensation chondrogenic condensation uberon UBERON:0005863 cartilaginous condensation UBERON:0005863 Cell condensation that is an aggregation of mesenchymal cells that are committed to differentiate into chondroblasts and chondrocytes. GO:curator cartilage condensation EMAPA:25353 cartilagenous condensation EHDAA2:0003147 chondrogenic condensation VSAO:0000092 UBERON:0008714 AEO:0000149 EHDAA2_RETIRED:0003149 pre muscle mass premuscle mass uberon UBERON:0005865 pre-muscle condensation UBERON:0005865 A delimited region of dense mesenchyme within looser mesenchyme whose cells are committed to become chondroblasts. AEO:0000150 EHDAA2:0003150 EMAPA:32736 pre-chondrogenic condensation precartilage condensation precartilagenous condensation prechondrogenic condensation uberon UBERON:0005866 pre-cartilage condensation UBERON:0005866 A delimited region of dense mesenchyme within looser mesenchyme whose cells are committed to become chondroblasts. AEO:0000150 AEO:JB The paired ventral prominences formed by bifurcation of the first pharyngeal arches in the embryo; the two prominences unite ventrally and fuse to form the mandible and lower lip. EHDAA2:0001061 EHDAA:5871 EMAPA:17355 FMA:293051 NCIT:C34204 Wikipedia:Mandibular_prominence uberon mandibular process mandibular swelling UBERON:0005867 mandibular prominence UBERON:0005867 The paired ventral prominences formed by bifurcation of the first pharyngeal arches in the embryo; the two prominences unite ventrally and fuse to form the mandible and lower lip. ISBN:0-683-40008-8 MP:0010939 mandibular process Wikipedia:Mandibular_prominence mandibular swelling https://orcid.org/0000-0002-6601-2165 A subdivision of skeleton that supports pharyngeal arch 2. AAO:0000665 AAO:0010370 TAO:0001276 XAO:0003177 ZFA:0001276 hyoid arch skeleton pharyngeal arch 2 skeleton hyoid bars uberon UBERON:0005884 hyoid arch skeleton UBERON:0005884 A subdivision of skeleton that supports pharyngeal arch 2. OBOL:automatic hyoid arch skeleton ZFA:0001276 pharyngeal arch 2 skeleton ZFA:0001276 hyoid bars TAO:0001276 Anatomical cluster that is located in the posterior region of the cranium and forms the margin of the foramen magnum and occipital condyles. AAO:0010199 BTO:0004675 FMA:49187 SCTID:362618001 TAO:0001414 XAO:0003173 ZFA:0001414 neuronames:2431 basicranial region occipital part of head occipital region of head uberon back of head UBERON:0005902 occipital region UBERON:0005902 Anatomical cluster that is located in the posterior region of the cranium and forms the margin of the foramen magnum and occipital condyles. TAO:0001414 UBERONREF:0000007 basicranial region ZFA:0001414 occipital part of head FMA:49187 occipital region of head FMA:49187 back of head FMA:49187 Organ with organ cavity, which has as parts a serous membrane and a serous cavity . Examples: pleural sac, pericardial sac, tendon sheath, bursa.[FMA]. FMA:9689 SCTID:362890006 uberon UBERON:0005906 See notes for serous membrane serous sac UBERON:0005906 Organ with organ cavity, which has as parts a serous membrane and a serous cavity . Examples: pleural sac, pericardial sac, tendon sheath, bursa.[FMA]. FMA:9689 https://github.com/obophenotype/uberon/issues/86 Epithelium that derives from the endoderm. Examples: urothelium, transitional epithelium of ureter, epithelium of prostatic gland.[FMA]. FMA:69065 endoderm-derived epithelium endoepithelium uberon UBERON:0005911 endo-epithelium UBERON:0005911 Epithelium that derives from the endoderm. Examples: urothelium, transitional epithelium of ureter, epithelium of prostatic gland.[FMA]. FMA:69065 Subdivision of skeleton which consists of cranial skeleton, set of all vertebrae, set of all ribs and sternum[FMA, modified]. AAO:0000963 EMAPA:17214 MA:0000308 NCIT:C32172 SCTID:361725000 VSAO:0000056 Wikipedia:Axial_skeleton XAO:0004011 uberon UBERON:0005944 axial skeleton plus cranial skeleton UBERON:0005944 Subdivision of skeleton which consists of cranial skeleton, set of all vertebrae, set of all ribs and sternum[FMA, modified]. FMA:71221 VSAO:0000056 Wikipedia:Axial_skeleton https://github.com/obophenotype/uberon/issues/44 https://github.com/obophenotype/uberon/wiki/The-axial-skeleton An outflow tract that is part of a cardiac atrium. FMA:14141 outflow part of atrium uberon UBERON:0005946 outflow tract of atrium UBERON:0005946 An outflow tract that is part of a cardiac atrium. OBOL:automatic outflow part of atrium FMA:14141 Anteriosuperior, smooth-walled portion of the cavity of the right ventricle, beginning at the supraventricular crest and terminating in the pulmonary trunk. infundibulum FMA:7216 NCIT:C61368 SCTID:244379003 conus arteriosus (infundibulum) infundibulum of right ventricle outflow tract of right ventricle pulmonary conus right ventricle pulmonary outflow tract right ventricular outflow tract uberon arterial cone conus arteriosus pulmonary cone pulmonary conus UBERON:0005953 outflow part of right ventricle UBERON:0005953 Anteriosuperior, smooth-walled portion of the cavity of the right ventricle, beginning at the supraventricular crest and terminating in the pulmonary trunk. MP:0010428 infundibulum Wikipedia:Conus_arteriosus conus arteriosus (infundibulum) FMA:7216 infundibulum of right ventricle FMA:7216 MP:0010428 outflow tract of right ventricle FMA:7216 pulmonary conus FMA:7216 right ventricle pulmonary outflow tract MP:0010428 right ventricular outflow tract MP:0010428 arterial cone MP:0010428 conus arteriosus MP:0010428 pulmonary cone MP:0010428 pulmonary conus MP:0010428 Anterosuperior fibrous portion of the left ventricle that connects to the ascending aorta. FMA:9473 SCTID:264070001 Wikipedia:Aortic_vestibule Sibson vestibule aortic vestibule heart left ventricle outflow tract left ventricular outflow left ventricular outflow tract outflow tract of left ventricle uberon UBERON:0005956 outflow part of left ventricle UBERON:0005956 Anterosuperior fibrous portion of the left ventricle that connects to the ascending aorta. MP:0010429 Sibson vestibule MP:0010429 aortic vestibule FMA:9473 MP:0010429 heart left ventricle outflow tract MP:0010429 left ventricular outflow FMA:9473 left ventricular outflow tract HP:0011103 outflow tract of left ventricle FMA:9473 Outflow part of atrium which consists of wall and cavity of the outflow part of right atrium and the tricuspid valve.[FMA]. FMA:9550 main part of right atrium outflow tract of right atrium uberon UBERON:0005965 outflow part of right atrium UBERON:0005965 Outflow part of atrium which consists of wall and cavity of the outflow part of right atrium and the tricuspid valve.[FMA]. FMA:9550 FMA:FMA main part of right atrium FMA:9550 outflow tract of right atrium FMA:9550 An outflow tract of atrium that is part of a left atrium. FMA:9551 main part of left atrium outflow tract of left atrium uberon UBERON:0005966 outflow part of left atrium UBERON:0005966 An outflow tract of atrium that is part of a left atrium. OBOL:automatic main part of left atrium FMA:9551 outflow tract of left atrium FMA:9551 The vertical crest of the interior wall of the right atrium that lies to the right of the sinus of the vena cava and separates this from the remainder of the right atrium. FMA:9236 SCTID:277693004 Wikipedia:Crista_terminalis crista terminalis cordis crista terminalis of right atrium uberon UBERON:0005979 crista terminalis UBERON:0005979 The vertical crest of the interior wall of the right atrium that lies to the right of the sinus of the vena cava and separates this from the remainder of the right atrium. MP:0010495 crista terminalis cordis FMA:9236 crista terminalis of right atrium FMA:9236 The laminar structure of the heart. uberon UBERON:0005983 heart layer UBERON:0005983 The laminar structure of the heart. MP:0010545 Any of the arteries or veins that supply blood to the heart or return blood from the heart muscles to the circulation. MESH:D003331 Wikipedia:Coronary_circulation uberon UBERON:0005985 coronary vessel UBERON:0005985 Any of the arteries or veins that supply blood to the heart or return blood from the heart muscles to the circulation. MP:0010551 The wall of the heart that separates the right atrium and left ventricle; and is located just above the septal cusp of the tricuspid valve. FMA:7136 SCTID:280151006 Wikipedia:Atrioventricular_septum membranous atrioventricular septum uberon UBERON:0005989 atrioventricular septum UBERON:0005989 The wall of the heart that separates the right atrium and left ventricle; and is located just above the septal cusp of the tricuspid valve. MP:0010592 membranous atrioventricular septum FMA:7136 The paired arteries that carry blood to the yolk sac from the dorsal aorta. EHDAA2:0002208 EMAPA:16207 Wikipedia:Vitelline_arteries uberon UBERON:0006002 Development notes:; the vitelline arteries give rise to the celiac artery, superior mesenteric artery, and inferior mesenteric artery in the adult[MP:0010664] vitelline artery UBERON:0006002 The paired arteries that carry blood to the yolk sac from the dorsal aorta. MP:0010664 Wikipedia:Vitelline_arteries Anatomical structure embedded in or located in the integument that is part of the integumental system. Examples: hair, follicles, skin glands, claws, nails, feathers. Wikipedia:Skin_appendage body hair or bristle uberon skin adnexa skin adnexal structure skin appendage UBERON:0006003 integumentary adnexa UBERON:0006003 Anatomical structure embedded in or located in the integument that is part of the integumental system. Examples: hair, follicles, skin glands, claws, nails, feathers. http://code.google.com/p/caro2/issues/detail?id=5 http://orcid.org/0000-0002-6601-2165 body hair or bristle GO:GO skin adnexa Wikipedia:Skin_appendage skin appendage Wikipedia:Skin_appendage uberon UBERON:0006056 posterior surface of head UBERON:0006056 A threadlike extension of a nerve cell and consists of an axon and myelin sheath (if it is myelinated) in the nervous system. There are nerve fibers in the central nervous system and peripheral nervous system. A nerve fiber may be myelinated and/or unmyelinated. In the central nervous system (CNS), myelin by oligodendroglia cells is formed. Schwann cells form myelin in the peripheral nervous system (PNS). Schwann cells also make a thin covering in an axon without myelin (in the PNS). A peripheral nerve fiber contains an axon, myelin sheath, schwann cells and its endoneurium. There are no endoneurium and schwann cells in the central nervous system. BAMS:nfi FMA:5914 MESH:D009412 SCTID:88545005 Wikipedia:Nervous_system_fiber nerve fibre neurofibrum uberon UBERON:0006134 nerve fiber UBERON:0006134 A threadlike extension of a nerve cell and consists of an axon and myelin sheath (if it is myelinated) in the nervous system. There are nerve fibers in the central nervous system and peripheral nervous system. A nerve fiber may be myelinated and/or unmyelinated. In the central nervous system (CNS), myelin by oligodendroglia cells is formed. Schwann cells form myelin in the peripheral nervous system (PNS). Schwann cells also make a thin covering in an axon without myelin (in the PNS). A peripheral nerve fiber contains an axon, myelin sheath, schwann cells and its endoneurium. There are no endoneurium and schwann cells in the central nervous system. Wikipedia:Nervous_system_fiber nerve fibre FMA:5914 neurofibrum FMA:5914 Axons of neurons encased in a lipoproteinaceous material called myelin. (MeSH). FMA:5915 GAID:745 MESH:D009413 NCIT:C12627 SCTID:362296008 uberon UBERON:0006135 myelinated nerve fiber UBERON:0006135 Axons of neurons encased in a lipoproteinaceous material called myelin. (MeSH). ncithesaurus:Myelinated_Nerve_Fiber FMA:5916 GAID:767 MESH:D036421 NCIT:C33835 SCTID:46920005 non-myelinated nerve fiber uberon UBERON:0006136 unmyelinated nerve fiber UBERON:0006136 non-myelinated nerve fiber FMA:5916 The spiral septum that separates the truncus arteriosus into a ventral pulmonary trunk and the dorsal aorta[MP]. The aorticopulmonary septum is developmentally formed from neural crest, specifically the cardiac neural crest, and actively separates the aorta and pulmonary arteries and fuses with the interventricular septum within the heart during development. The actual mechanism of septation of the outflow tract is poorly understood, but is recognized as a dynamic process with contributions from contractile, hemodynamic, and extracellular matrix interactions. UBERON:0005999 CALOHA:TS-2409 EHDAA2:0000136 EHDAA:2592 EMAPA:16827 VHOG:0000502 Wikipedia:Aorticopulmonary_septum aortico-pulmonary septum aorticopulmonary septum uberon aortic septum spiral septum UBERON:0006207 aortico-pulmonary spiral septum UBERON:0006207 The spiral septum that separates the truncus arteriosus into a ventral pulmonary trunk and the dorsal aorta[MP]. The aorticopulmonary septum is developmentally formed from neural crest, specifically the cardiac neural crest, and actively separates the aorta and pulmonary arteries and fuses with the interventricular septum within the heart during development. The actual mechanism of septation of the outflow tract is poorly understood, but is recognized as a dynamic process with contributions from contractile, hemodynamic, and extracellular matrix interactions. MP:0010650 Wikipedia:Aorticopulmonary_septum aortico-pulmonary septum Wikipedia:Aorticopulmonary_septum aorticopulmonary septum Wikipedia:Aorticopulmonary_septum aortic septum Wikipedia:Aorticopulmonary_septum spiral septum Wikipedia:Aorticopulmonary_septum The thin bilaminar membrane derived from the prechordal plate that is devoid of mesoderm and formed by the apposition of the stomodeal ectoderm with the foregut endoderm; after the embryonic head fold has evolved it lies at the caudal limit of the stomodeum, forming a septum between the primitive mouth and pharynx; the membrane eventually disappears, and thus a communication is established between the mouth and the future pharynx. EHDAA2:0000189 EHDAA:536 EMAPA:16259 FMA:313607 SCTID:361412007 VHOG:0000380 Wikipedia:Buccopharyngeal_membrane uberon oral membrane oral plate oropharyngeal membrane UBERON:0006211 buccopharyngeal membrane UBERON:0006211 The thin bilaminar membrane derived from the prechordal plate that is devoid of mesoderm and formed by the apposition of the stomodeal ectoderm with the foregut endoderm; after the embryonic head fold has evolved it lies at the caudal limit of the stomodeum, forming a septum between the primitive mouth and pharynx; the membrane eventually disappears, and thus a communication is established between the mouth and the future pharynx. MP:0012521 oral membrane MP:0012521 oral plate MP:0012521 oropharyngeal membrane Wikipedia:Buccopharyngeal_membrane EHDAA:1267 EMAPA:16342 RETIRED_EHDAA2:0000268 uberon UBERON:0006218 common atrial chamber UBERON:0006218 The foremost region of the future forebrain that develops into the diencephalon. EFO:0003442 EHDAA2:0000600 EHDAA:844 EMAPA:16514 RETIRED_EHDAA2:0000386 TAO:0000574 ZFA:0000574 presumptive diencephalon uberon UBERON:0006222 future diencephalon UBERON:0006222 The foremost region of the future forebrain that develops into the diencephalon. UBERON:cjm Wikipedia:Diencephalon presumptive diencephalon TAO:0000574 The embryonic precursor of the brain. BAMS:Enc BTO:0004726 EFO:0003431 EHDAA:300 EHDAA:830 EMAPA:16089 FMA:312967 RETIRED_EHDAA2:0000591 TAO:0000146 ZFA:0000146 brain rudiment presumptive brain encephalon uberon embryonic brain UBERON:0006238 future brain UBERON:0006238 The embryonic precursor of the brain. NLX:94995 brain rudiment TAO:0000146 presumptive brain ZFA:0000146 encephalon NLX:94995 embryonic brain BTO:0004726 A tendon that has the potential to develop into a central tendon. EHDAA2:0000593 EHDAA:4118 EMAPA:25035 uberon cranial derivative of septum transversum cranial part of septum transversum UBERON:0006239 future central tendon UBERON:0006239 A tendon that has the potential to develop into a central tendon. OBOL:automatic cranial derivative of septum transversum http://orcid.org/0000-0002-6601-2165 cranial part of septum transversum http://orcid.org/0000-0002-6601-2165 A presumptive structure that has the potential to develop into a forebrain. BAMS:Pros EFO:0003423 EHDAA2:0000661 EHDAA:2643 EMAPA:16640 TAO:0000062 Wikipedia:Prosencephalon ZFA:0000062 future prosencephalon presumptive forebrain presumptive prosencephalon uberon prosencephalon UBERON:0006240 future forebrain UBERON:0006240 A presumptive structure that has the potential to develop into a forebrain. OBOL:automatic presumptive forebrain ZFA:0000062 presumptive prosencephalon TAO:0000062 prosencephalon EHDAA2:0000661 EFO:0003438 EHDAA2:0000674 EHDAA:898 EMAPA:16092 EMAPA:16755 TAO:0000417 ZFA:0000417 presumptive spinal cord presumptive spinal cord neural keel presumptive spinal cord neural plate presumptive spinal cord neural rod uberon UBERON:0006241 future spinal cord UBERON:0006241 presumptive spinal cord ZFA:0000417 presumptive spinal cord neural keel TAO:0000417 presumptive spinal cord neural plate TAO:0000417 presumptive spinal cord neural rod TAO:0000417 EHDAA2:0000996 EMAPA:17186 VHOG:0000449 uberon lingual swelling UBERON:0006260 the collection consisting of the two lateral swellings and the medial swelling lingual swellings UBERON:0006260 lingual swelling EHDAA2:0000996 An anatomical junctions that overlaps the mouth and foregut. EHDAA:534 EMAPA:16258 RETIRED_EHDAA2:0001205 VHOG:0000592 uberon UBERON:0006264 mouth-foregut junction UBERON:0006264 An anatomical junctions that overlaps the mouth and foregut. OBOL:automatic The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. EHDAA2:0001278 EHDAA:264 EMAPA:16101 NCIT:C34231 VHOG:0001212 uberon UBERON:0006267 notochordal plate UBERON:0006267 The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. VHOG:0001212 A midline cellular cord formed from the migration of mesenchymal cells from the primitive knot. EHDAA2:0001279 EHDAA:224 EMAPA:16102 FMA:293135 NCIT:C34232 VHOG:0001213 uberon chordamesoderm presumptive notochord UBERON:0006268 The notochordal process grows cranially until it reaches the prechordal plate, the future site of the mouth. In this area the ectoderm is attached directly to the endoderm without intervening mesoderm. This area is known as the oropharyngeal membrane, and it will break down to become the mouth. At the other end of the primitive streak the ectoderm is also fused directly to the endoderm; this is known as the cloacal membrane (proctodeum), or primordial anus. notochordal process UBERON:0006268 A midline cellular cord formed from the migration of mesenchymal cells from the primitive knot. http://www.med.umich.edu/lrc/coursepages/m1/embryology/embryo/05embryonicperiod.htm Each of the canals that links the peritoneal cavity and the caudal part of a pleural cavity. EHDAA2:0001481 EHDAA:4128 EMAPA:17707 SCTID:361413002 VHOG:0001505 uberon pleuroperitoneal channel UBERON:0006279 pleuroperitoneal canal UBERON:0006279 Each of the canals that links the peritoneal cavity and the caudal part of a pleural cavity. ISBN:0124020607 VHOG:0001505 pleuroperitoneal channel VHOG:0001505 Multi-tissue structure that is part of the heart tube and will become the cardiac ventricle. UBERON:0010226 embryonic ventricle EHDAA2:0001531 EMAPA:16350 FMA:71006 NCIT:C34160 SCTID:361524003 TAO:0002231 Wikipedia:Embryonic_ventricle ZFA:0001719 early heart ventricle embryonic heart ventricle future heart ventricle presumptive cardiac ventricle heart tube primitive ventricle primitive ventricle of heart primordial cardiac ventricle primordial ventricle uberon UBERON:0006283 The embryonic ventricle or primitive ventricle of the developing heart gives rise to the trabeculated parts of the left and right ventricles. In contrast, the smooth parts of the left and right ventricles originate from the embryological bulbus cordis. The primitive ventricle becomes divided by a septum, the septum inferius or ventricular septum, which grows upward from the lower part of the ventricle, its position being indicated on the surface of the heart by a furrow. Its dorsal part increases more rapidly than its ventral portion, and fuses with the dorsal part of the septum intermedium. For a time an interventricular foramen exists above its ventral portion, but this foramen is ultimately closed by the fusion of the aortic septum with the ventricular septum[WP] future cardiac ventricle UBERON:0006283 Multi-tissue structure that is part of the heart tube and will become the cardiac ventricle. ZFA:0001719 presumptive cardiac ventricle heart tube ZFA:0001719 primitive ventricle EHDAA2:0001531 primitive ventricle of heart EMAPA:16350 primordial cardiac ventricle FMA:71006 primordial ventricle FMA:71006 EHDAA:924 EMAPA:16663 RETIRED_EHDAA2:0002089 trigeminal V preganglion uberon trigeminal preganglion UBERON:0006304 See: https://github.com/obophenotype/mouse-anatomy-ontology/issues/13 and https://github.com/obophenotype/uberon/issues/693 -- consider merging into trigeminal ganglion, as this complicates the model future trigeminal ganglion UBERON:0006304 trigeminal V preganglion EMAPA:16663 trigeminal preganglion EMAPA:16663 A segment of the eyeball that is filled with refractive media. BTO:0002085 FMA:58071 MA:0002459 NCIT:C32301 SCTID:280540004 eye chamber eyeball chamber uberon chamber of eye UBERON:0006311 chamber of eyeball UBERON:0006311 A segment of the eyeball that is filled with refractive media. http://orcid.org/0000-0002-6601-2165 eye chamber MA:0002459 eyeball chamber FMA:58071 chamber of eye BTO:0002085 Body substance in a liquid or semi-solid state in the eyeball which serves to refract light. MA:0001911 uberon UBERON:0006312 ocular refractive media UBERON:0006312 Body substance in a liquid or semi-solid state in the eyeball which serves to refract light. http://orcid.org/0000-0002-6601-2165 Liquid components of living organisms. includes fluids that are excreted or secreted from the body as well as body water that normally is not. fluid BIRNLEX:20 FMA:280556 GAID:266 MESH:D001826 Wikipedia:Body_fluid galen:BodyFluid body fluid uberon UBERON:0006314 bodily fluid UBERON:0006314 Liquid components of living organisms. includes fluids that are excreted or secreted from the body as well as body water that normally is not. MESH:A12.207 Wikipedia:Body_fluid body fluid GAID:266 A nucleus of brain that is part of a brainstem. EMAPA:32790 MA:0000821 uberon brain stem nucleus UBERON:0006331 brainstem nucleus UBERON:0006331 A nucleus of brain that is part of a brainstem. OBOL:automatic brain stem nucleus EMAPA:32790 2 An artery that connects two larger arteries. EMAPA:18598 MA:0001938 NCIT:C52851 uberon UBERON:0006347 Grouping for anterior and posterior communicating artery UBERON:0006347 An artery that connects two larger arteries. ncithesaurus:Communicating_Artery A portion of organism substance that secreted_by a zone of skin. MA:0002537 skin fluid/secretion uberon skin fluid skin substance UBERON:0006535 skin secretion UBERON:0006535 A portion of organism substance that secreted_by a zone of skin. OBOL:automatic skin fluid/secretion MA:0002537 A portion of organism substance that is secreted by a female reproductive gland. MA:0002510 female reproductive system fluid/secretion uberon female reproductive system fluid female reproductive system secretion UBERON:0006537 female reproductive gland secretion UBERON:0006537 A portion of organism substance that is secreted by a female reproductive gland. UBERON:cjm female reproductive system fluid/secretion MA:0002510 A portion of organism substance that secreted_by a respiratory system. EMAPA:36550 MA:0002533 NCIT:C13722 uberon respiratory system fluid respiratory system secretion UBERON:0006538 respiratory system fluid/secretion UBERON:0006538 A portion of organism substance that secreted_by a respiratory system. OBOL:automatic The pharynx is the part of the digestive system immediately posterior to the mouth[GO]. MAT:0000049 MESH:D010614 MIAA:0000049 uberon anterior part of foregut pharyngeal tube UBERON:0006562 pharynx UBERON:0006562 The pharynx is the part of the digestive system immediately posterior to the mouth[GO]. GO:0060465 Tunica media of artery which is continuous with the myocardium of right ventricle.[FMA]. FMA:85030 uberon UBERON:0006563 tunica media of pulmonary trunk UBERON:0006563 Tunica media of artery which is continuous with the myocardium of right ventricle.[FMA]. FMA:85030 FMA:FMA A myocardium that is part of a left ventricle of a heart. FMA:9558 MA:0002983 SCTID:362021000 left ventricular myocardium myocardium of left ventricle uberon UBERON:0006566 left ventricle myocardium UBERON:0006566 A myocardium that is part of a left ventricle of a heart. http://orcid.org/0000-0002-6601-2165 left ventricular myocardium FMA:9558 myocardium of left ventricle FMA:9558 A myocardium that is part of a right ventricle of a heart. FMA:9535 MA:0002984 SCTID:362020004 myocardium of right ventricle right ventricular myocardium uberon UBERON:0006567 right ventricle myocardium UBERON:0006567 A myocardium that is part of a right ventricle of a heart. http://orcid.org/0000-0002-6601-2165 myocardium of right ventricle FMA:9535 right ventricular myocardium FMA:9535 A nucleus of brain that is part of a diencephalon. TAO:0002191 ZFA:0001659 uberon UBERON:0006569 diencephalic nucleus UBERON:0006569 A nucleus of brain that is part of a diencephalon. OBOL:automatic Presumptive structure of the blastula that will develop into endoderm. AAO:0000471 EFO:0003437 TAO:0000416 ZFA:0000416 uberon UBERON:0006595 presumptive endoderm UBERON:0006595 Presumptive structure of the blastula that will develop into endoderm. http://orcid.org/0000-0002-6601-2165 AAO:0000468 EFO:0003439 TAO:0000568 ZFA:0000568 future blood uberon UBERON:0006596 presumptive blood UBERON:0006596 Portion of embryonic tissue determined by fate mapping to become a structure. AAO:0000479 TAO:0001116 ZFA:0001116 future structure presumptive structures uberon UBERON:0006598 presumptive structure UBERON:0006598 Portion of embryonic tissue determined by fate mapping to become a structure. GOC:CVS GOC:YMB ZFA:0001116 presumptive structures ZFA:0001116 Presumptive structure of the blastula that will develop into ectoderm. AAO:0000470 EFO:0003466 TAO:0001376 XAO:0004132 ZFA:0001376 uberon presumptive epidermis UBERON:0006601 presumptive ectoderm UBERON:0006601 Presumptive structure of the blastula that will develop into ectoderm. http://orcid.org/0000-0002-6601-2165 presumptive epidermis ZFA:0001376 Presumptive structure of the blastula that will develop into mesoderm. AAO:0000476 EFO:0003467 TAO:0001377 ZFA:0001377 uberon UBERON:0006603 presumptive mesoderm UBERON:0006603 Presumptive structure of the blastula that will develop into mesoderm. http://orcid.org/0000-0002-6601-2165 2 A cartilaginous joint that connects left and right mandibles/dentary bones. Mandibular symphysis is unpaired[TAO,modified]. AAO:0000277 FMA:75779 MA:0001490 TAO:0001851 Wikipedia:Symphysis_menti ZFA:0005488 dentary symphysis inter-dentary joint inter-mandibular joint symphysis menti uberon mental symphysis UBERON:0006606 mandibular symphysis UBERON:0006606 A cartilaginous joint that connects left and right mandibles/dentary bones. Mandibular symphysis is unpaired[TAO,modified]. TAO:wd Wikipedia:Symphysis_menti ZFA:0005488 dentary symphysis TAO:0001851 inter-dentary joint TAO:0001851 inter-mandibular joint TAO:0001851 symphysis menti MA:0001490 mental symphysis Wikipedia:Symphysis_menti On the interior surface of the temporal bone, behind the rough surface of the apex, is the large circular aperture of the carotid canal, which ascends at first vertically, and then, making a bend, runs horizontally forward and medialward. It transmits into the cranium, the internal carotid artery, and the carotid plexus of nerves. Sympathetics to the head also pass through the carotid canal. They have several motor functions: raise the eyelid (superior tarsal muscle), dilate pupil, innervate sweat glands of face and scalp and constricts blood vessels in head[WP]. EMAPA:18707 FMA:55805 Wikipedia:Carotid_canal uberon UBERON:0006668 carotid canal UBERON:0006668 On the interior surface of the temporal bone, behind the rough surface of the apex, is the large circular aperture of the carotid canal, which ascends at first vertically, and then, making a bend, runs horizontally forward and medialward. It transmits into the cranium, the internal carotid artery, and the carotid plexus of nerves. Sympathetics to the head also pass through the carotid canal. They have several motor functions: raise the eyelid (superior tarsal muscle), dilate pupil, innervate sweat glands of face and scalp and constricts blood vessels in head[WP]. Wikipedia:Carotid_canal The three-lobed cloverleaf-shaped aponeurosis situated at the center of the diaphragm; the central tendon is fused with the fibrous pericardium that provides attachment for the muscle fibers. EMAPA:17702 FMA:58279 NCIT:C34119 SCTID:244943002 VHOG:0001399 Wikipedia:Central_tendon_of_diaphragm central tendon centrum tendineum uberon UBERON:0006670 central tendon of diaphragm UBERON:0006670 The three-lobed cloverleaf-shaped aponeurosis situated at the center of the diaphragm; the central tendon is fused with the fibrous pericardium that provides attachment for the muscle fibers. MGI:csmith MP:0012061 central tendon FMA:58279 centrum tendineum FMA:58279 An anatomical boundary that adjacent_to a epithelium. FMA:70997 epithelium surface uberon UBERON:0006677 surface of epithelium UBERON:0006677 An anatomical boundary that adjacent_to a epithelium. OBOL:automatic epithelium surface FMA:70997 The hypoglossal canal is a bony canal in the occipital bone of the skull. EMAPA:19012 FMA:75370 SCTID:139380001 Wikipedia:Hypoglossal_canal uberon anterior condylar canal hyperglossal canal UBERON:0006682 hypoglossal canal UBERON:0006682 The hypoglossal canal is a bony canal in the occipital bone of the skull. Wikipedia:Hypoglossal_canal anterior condylar canal EMAPA:19012 hyperglossal canal Wikipedia:Hypoglossal_canal During the third week of embryological development there appears, immediately behind the ventral ends of the two halves of the mandibular arch, a rounded swelling named the tuberculum impar, which was described by His as undergoing enlargement to form the buccal part of the tongue. More recent researches, however, show that this part of the tongue is mainly, if not entirely, developed from a pair of lateral swellings which rise from the inner surface of the mandibular arch and meet in the middle line. The site of their meeting remains post-embryonically as the median sulcus of the tongue. The tuberculum impar is said to form the central part of the tongue immediately in front of the foramen cecum, but Hammar insists that it is purely a transitory structure and forms no part of the adult tongue[WP, Gray's]. EHDAA2:0001081 EMAPA:17187 FMA:312476 SCTID:308821003 VHOG:0000730 Wikipedia:Tuberculum_impar median lingual swelling median tongue bud tuberculum impar tuberculum linguale mediale uberon UBERON:0006756 The thyroid initially develops caudal to the tuberculum impar . This embryonic swelling arises from the first pharyngeal arch and occurs midline on the floor of the developing pharynx, eventually helping form the tongue as the 2 lateral lingual swellings overgrow it. [http://emedicine.medscape.com/article/845125-overview] median lingual swelling UBERON:0006756 During the third week of embryological development there appears, immediately behind the ventral ends of the two halves of the mandibular arch, a rounded swelling named the tuberculum impar, which was described by His as undergoing enlargement to form the buccal part of the tongue. More recent researches, however, show that this part of the tongue is mainly, if not entirely, developed from a pair of lateral swellings which rise from the inner surface of the mandibular arch and meet in the middle line. The site of their meeting remains post-embryonically as the median sulcus of the tongue. The tuberculum impar is said to form the central part of the tongue immediately in front of the foramen cecum, but Hammar insists that it is purely a transitory structure and forms no part of the adult tongue[WP, Gray's]. Wikipedia:Tuberculum_impar median lingual swelling EHDAA2:0001081 median tongue bud http://emedicine.medscape.com/article/845125-overview tuberculum linguale mediale Wikipedia:Tuberculum_impar During the third week there appears, immediately behind the ventral ends of the two halves of the mandibular arch, a rounded swelling named the tuberculum impar, which was described by His as undergoing enlargement to form the buccal part of the tongue. More recent researches, however, show that this part of the tongue is mainly, if not entirely, developed from a pair of lateral swellings (or distal tongue bud) which rise from the inner surface of the mandibular arch and meet in the middle line. EHDAA2:0000911 EMAPA:17189 FMA:313628 VHOG:0000731 Wikipedia:Lateral_lingual_swelling uberon lateral lingual prominence lateral swellings tuberculum laterale UBERON:0006757 lateral lingual swelling UBERON:0006757 During the third week there appears, immediately behind the ventral ends of the two halves of the mandibular arch, a rounded swelling named the tuberculum impar, which was described by His as undergoing enlargement to form the buccal part of the tongue. More recent researches, however, show that this part of the tongue is mainly, if not entirely, developed from a pair of lateral swellings (or distal tongue bud) which rise from the inner surface of the mandibular arch and meet in the middle line. Wikipedia:Lateral_lingual_swelling lateral swellings Wikipedia:Lateral_lingual_swelling tuberculum laterale Wikipedia:Lateral_lingual_swelling The edge of the cornea where it joins the sclera; the limbus is a common site for the occurrence of corneal epithelial neoplasm. EFO:0001403 FMA:58342 GAID:896 MESH:D016850 SCTID:63716004 Wikipedia:Corneal_limbus ZFA:0005570 cornea limbus corneal limbus corneal-scleral limbus corneoscleral junction sclerocorneal junction sclerocorneal limbus uberon UBERON:0006761 This location has parts such as blood vessels etc. See PMC2868485, http://www.ncbi.nlm.nih.gov/pubmed/2695343 corneo-scleral junction UBERON:0006761 The edge of the cornea where it joins the sclera; the limbus is a common site for the occurrence of corneal epithelial neoplasm. MP:0013477 corneal limbus FMA:58342 GAID:896 corneal-scleral limbus PMID:17051547 corneoscleral junction GAID:896 sclerocorneal junction FMA:58342 sclerocorneal limbus GAID:896 An epithelium that is composed primarily of secretory cells. BTO:0002991 NCIT:C43370 NCIT:C45715 uberon UBERON:0006799 glandular epithelium UBERON:0006799 An epithelium that is composed primarily of secretory cells. http://orcid.org/0000-0002-6601-2165 Loose connective tissue located at the outer and inner layers of organs. Examples: submucosal connective tissue, tunica adventitia of artery, papillary dermis, superficial fascia of dorsum of hand. AAO:0000027 FMA:63897 SCTID:68477002 loose areolar connective tissue uberon areolar tissue loose connective tissue UBERON:0006815 areolar connective tissue UBERON:0006815 Loose connective tissue located at the outer and inner layers of organs. Examples: submucosal connective tissue, tunica adventitia of artery, papillary dermis, superficial fascia of dorsum of hand. FMA:63897 loose areolar connective tissue FMA:63897 loose connective tissue AAO:0000027 An anatomical space that surrounded_by a trachea. FMA:7469 SCTID:197486000 lumen of cartilaginous trachea tracheal lumen uberon UBERON:0006833 lumen of trachea UBERON:0006833 An anatomical space that surrounded_by a trachea. OBOL:automatic lumen of cartilaginous trachea OBOL:automatic tracheal lumen FMA:7469 A subdivision of a the reproductive tract in a female organism that is the site of embryo development. TADS:0000421 WBbt:0006760 uberon UBERON:0006834 uterus or analog UBERON:0006834 A subdivision of a the reproductive tract in a female organism that is the site of embryo development. http://orcid.org/0000-0002-6601-2165 A furrow or an incomplete tube. AEO:0000161 EHDAA2_RETIRED:0003161 uberon groove UBERON:0006846 Surface groove is modelled as immaterial - see https://github.com/obophenotype/uberon/issues/2667 for discussion surface groove UBERON:0006846 A furrow or an incomplete tube. AEO:0000161 AEO:JB https://github.com/obophenotype/human-developmental-anatomy-ontology/issues/4 groove AEO:0000161 A vasculature that is part of a organ. FMA:74612 organ vasculature set of blood vessels of organ uberon UBERON:0006876 vasculature of organ UBERON:0006876 A vasculature that is part of a organ. OBOL:automatic organ vasculature FMA:74612 set of blood vessels of organ FMA:74612 A head mesenchyme that develops_from a mesoderm. AAO:0011051 EFO:0003337 EFO:0003603 EHDAA2:0001118 EHDAA:655 EMAPA:16099 EMAPA_RETIRED:16270 FMA:293859 TAO:0000998 VHOG:0000185 XAO:0000053 ZFA:0000998 head mesenchyme derived from mesoderm head mesenchyme from head mesoderm head mesenchyme from mesoderm mesenchyme derived from head mesoderm mesenchyme from head mesoderm uberon cranial mesoderm head mesoderm UBERON:0006904 head mesenchyme from mesoderm UBERON:0006904 A head mesenchyme that develops_from a mesoderm. OBOL:automatic head mesenchyme from head mesoderm EHDAA2:0001118 mesenchyme derived from head mesoderm EHDAA:1057 cranial mesoderm UBERON:0005280 head mesoderm AAO:0011051 UBERON:0005280 Mesenchyme that is part of a mandibular prominence. EHDAA2:0001062 EHDAA:5861 EHDAA:5873 EMAPA:17357 mesenchyme of mandibular process mesenchyme of mandibular prominence uberon UBERON:0006905 mandibular process mesenchyme UBERON:0006905 Mesenchyme that is part of a mandibular prominence. OBOL:automatic mesenchyme of mandibular process EMAPA:17357 mesenchyme of mandibular prominence https://orcid.org/0000-0002-6601-2165 An anatomical space that surrounded_by a digestive tract. BTO:0000349 EMAPA:32908 FMA:45677 digestive tract lumen gut cavity gut lumen lumen of alimentary tract lumen of digestive tract lumen of gut uberon UBERON:0006909 lumen of digestive tract UBERON:0006909 An anatomical space that surrounded_by a digestive tract. OBOL:automatic digestive tract lumen https://orcid.org/0000-0002-6601-2165 gut cavity BTO:0000349 gut lumen FMA:45677 lumen of alimentary tract https://orcid.org/0000-0002-6601-2165 lumen of digestive tract https://orcid.org/0000-0002-6601-2165 lumen of gut FMA:45677 An epithelium that is part of a lip. BTO:0004468 TAO:0005334 ZFA:0005334 uberon UBERON:0006913 lip epithelium UBERON:0006913 An epithelium that is part of a lip. OBOL:automatic An epithelium characterised by its most superficial layer consisting of squamous epithelial cells. BTO:0002072 NCIT:C12848 SCTID:40118003 Wikipedia:Squamous_epithelium uberon UBERON:0006914 squamous epithelium UBERON:0006914 An epithelium characterised by its most superficial layer consisting of squamous epithelial cells. Wikipedia:Squamous_epithelium Multilaminar epithelium which consists of more than one layer of squamous cells only one layer of which is in contact with a basement membrane. Examples: keratinized stratified squamous epithelium, epithelium of wall of esophagus.[FMA]. FMA:45563 NCIT:C13180 Wikipedia:Stratified_squamous_epithelium epithelium stratificatum squamosum uberon UBERON:0006915 stratified squamous epithelium UBERON:0006915 Multilaminar epithelium which consists of more than one layer of squamous cells only one layer of which is in contact with a basement membrane. Examples: keratinized stratified squamous epithelium, epithelium of wall of esophagus.[FMA]. FMA:45563 Wikipedia:Stratified_squamous_epithelium epithelium stratificatum squamosum FMA:45563 A squamous epithelium that is part of a tongue. MA:0002786 squamous epithelium of tongue uberon UBERON:0006919 tongue squamous epithelium UBERON:0006919 A squamous epithelium that is part of a tongue. OBOL:automatic squamous epithelium of tongue OBOL:automatic A squamous epithelium that is part of a esophagus. BTO:0003635 CALOHA:TS-1250 EMAPA:35324 MA:0001567 NCIT:C49222 uberon esophageal squamous epithelium squamous epithelium of esophagus squamous oesophageal epithelium UBERON:0006920 esophagus squamous epithelium UBERON:0006920 A squamous epithelium that is part of a esophagus. OBOL:automatic esophageal squamous epithelium OBOL:automatic squamous epithelium of esophagus OBOL:automatic squamous oesophageal epithelium MA:0001567 A squamous epithelium that is part of a stomach. EMAPA:35824 MA:0001611 uberon UBERON:0006921 stomach squamous epithelium UBERON:0006921 A squamous epithelium that is part of a stomach. OBOL:automatic A glandular epithelium that lines the stomach. The stomach's glandular epithelium is characterized by the presence of gastric glands. EMAPA:35814 FMA:63458 MA:0002784 epithelium of gastric gland uberon gastric gland epithelium UBERON:0006924 stomach glandular epithelium UBERON:0006924 A glandular epithelium that lines the stomach. The stomach's glandular epithelium is characterized by the presence of gastric glands. ISBN:0073040584 epithelium of gastric gland FMA:63458 gastric gland epithelium FMA:63458 Any gland that is part of the digestive system. AAO:0000130 BTO:0000345 uberon digestive gland UBERON:0006925 digestive system gland UBERON:0006925 Any gland that is part of the digestive system. UBERON:cjm digestive gland BTO:0000345 Simple columnar epithelium that constitutes the secretory part of a gland. Examples: epithelium of stomach, luminal epithelium of lactiferous duct.[FMA]. FMA:64800 NCIT:C13182 uberon UBERON:0006929 glandular columnar epithelium UBERON:0006929 Simple columnar epithelium that constitutes the secretory part of a gland. Examples: epithelium of stomach, luminal epithelium of lactiferous duct.[FMA]. FMA:64800 FMA:66809 uberon UBERON:0006930 glandular cuboidal epithelium UBERON:0006930 Stomach mucosa that is lined with glandular epithelium and part of a stomach glandular region. EMAPA:27167 MA:0001614 stomach glandular region glandular mucous membrane uberon UBERON:0006931 stomach glandular region mucosa UBERON:0006931 Stomach mucosa that is lined with glandular epithelium and part of a stomach glandular region. http://orcid.org/0000-0002-6601-2165 stomach glandular region glandular mucous membrane EMAPA:27167 Simple columnar epithelium made up of cells specialized to serve as sensory cells for the reception of external stimuli, as the sensory cells of the cochlea, vestibule, nasal mucosa, and tongue. CALOHA:TS-0682 FMA:62410 SCTID:309045006 uberon UBERON:0006934 sensory epithelium UBERON:0006934 Simple columnar epithelium made up of cells specialized to serve as sensory cells for the reception of external stimuli, as the sensory cells of the cochlea, vestibule, nasal mucosa, and tongue. BTO:0000314 The stroma of the ovary is a peculiar soft tissue, abundantly supplied with blood vessels, consisting for the most part of spindle-shaped cells with a small amount of ordinary connective tissue. These cells have been regarded by some anatomists as unstriped muscle cells, which, indeed, they most resemble; by others as connective-tissue cells. On the surface of the organ this tissue is much condensed, and forms a layer composed of short connective-tissue fibers, with fusiform cells between them. The stroma of the ovary may contain interstitial cells resembling those of the testis. CALOHA:TS-1246 EMAPA:28880 FMA:18626 MA:0002991 NCIT:C33638 SCTID:259306002 Wikipedia:Stroma_of_ovary interstitial tissue of ovary ovarian stroma ovary stroma stroma of the ovary stroma ovarica uberon UBERON:0006960 ovary stroma UBERON:0006960 The stroma of the ovary is a peculiar soft tissue, abundantly supplied with blood vessels, consisting for the most part of spindle-shaped cells with a small amount of ordinary connective tissue. These cells have been regarded by some anatomists as unstriped muscle cells, which, indeed, they most resemble; by others as connective-tissue cells. On the surface of the organ this tissue is much condensed, and forms a layer composed of short connective-tissue fibers, with fusiform cells between them. The stroma of the ovary may contain interstitial cells resembling those of the testis. Wikipedia:Stroma_of_ovary interstitial tissue of ovary FMA:18626 ovarian stroma FMA:18626 ovary stroma MA:0002991 stroma of the ovary Wikipedia:Stroma_of_ovary stroma ovarica FMA:18626 The vascular cord is the primordial vasculature that will develop into blood vessels by the process of tubulogenesis[GO]. The vascular cord is composed of angioblast or vascular endothelial cells in a solid linear mass called a cord. The cord then undergoes tubulogenesis to form the lumen of the vessels[ZFA]. EFO:0003709 TAO:0005077 ZFA:0005077 uberon UBERON:0006965 vascular cord UBERON:0006965 The vascular cord is the primordial vasculature that will develop into blood vessels by the process of tubulogenesis[GO]. The vascular cord is composed of angioblast or vascular endothelial cells in a solid linear mass called a cord. The cord then undergoes tubulogenesis to form the lumen of the vessels[ZFA]. GO:0072360 ZFA:0005077 A capillary that is part of the coronary system. ZFA:0005813 heart capillary uberon UBERON:0006966 coronary capillary UBERON:0006966 A capillary that is part of the coronary system. http://orcid.org/0000-0002-6601-2165 heart capillary GO:0003248 A two dimensional anatomical structure that is the boundary between an anatomical structure and an anatomical substance, an anatomical space or the organism's environment. Examples include the surface of your skin, the surface of the lining of your gut; the surface of the endothelium of you aorta that is in contact with blood.n. BILA:0000010 CARO:0001002 EHDAA2_RETIRED:0003192 FMA:24137 NCIT:C34022 uberon UBERON:0006984 Old definition: 'Non-material anatomical entity of two dimensions, that is demarcated by anatomical lines or points on the external or internal surfaces of anatomical structures.' Note, in the new definition, the space referred to is not necessarily an anatomical space. It may be the outside of an organism. anatomical surface UBERON:0006984 A two dimensional anatomical structure that is the boundary between an anatomical structure and an anatomical substance, an anatomical space or the organism's environment. Examples include the surface of your skin, the surface of the lining of your gut; the surface of the endothelium of you aorta that is in contact with blood.n. CARO:0001002 The splanchnic mesoderm in the cardiogenic region where the heart develops; it gives rise to endocardial heart tubes that fuse to form the primordial cardiac tube, the heart primordium[web]. Two migratory heart primordia that move ventrally during the course of neurulation, and then fuse[XAO]. AAO:0011021 BILA:0000051 EFO:0000315 EHDAA2:0000214 EHDAA:385 FMA:293143 SCTID:360387000 VHOG:0001641 XAO:0000235 cardiogenic splanchnopleure uberon cardiac mesoderm cardiogenic mesoderm cardiogenic region heart primordia UBERON:0007005 cardiogenic splanchnic mesoderm UBERON:0007005 The splanchnic mesoderm in the cardiogenic region where the heart develops; it gives rise to endocardial heart tubes that fuse to form the primordial cardiac tube, the heart primordium[web]. Two migratory heart primordia that move ventrally during the course of neurulation, and then fuse[XAO]. XAO:0000235 http://www.drugs.com/dict/cardiogenic-mesoderm.html https://github.com/obophenotype/insect_neuroanatomy_ontology/issues/7 cardiogenic splanchnopleure EHDAA2:0000214 cardiac mesoderm XAO:0000235 cardiogenic mesoderm http://www.drugs.com/dict/cardiogenic-mesoderm.html cardiogenic region http://orcid.org/0000-0002-6601-2165 heart primordia XAO:0000235 Organism at the cleavage stage. BILA:0000058 uberon UBERON:0007010 cleaving embryo UBERON:0007010 Organism at the cleavage stage. OBOL:automatic BILA:0000084 NCIT:C34268 SCTID:360394002 future digestive tract future digestive tube future gut primitive gut uberon embryonic digestive tube primordial digestive tube primordial gut UBERON:0007026 presumptive gut UBERON:0007026 BILA:0000142 uberon UBERON:0007037 mechanosensory system UBERON:0007037 Cranial neural crest that migrates into the mandibular arch. TAO:0007064 XAO:0000024 ZFA:0007064 uberon UBERON:0007098 mandibular neural crest UBERON:0007098 Cranial neural crest that migrates into the mandibular arch. ZFA:0007064 Cranial neural crest that migrates into the hyoid arch. TAO:0007065 XAO:0000025 ZFA:0007065 hyoid crest uberon UBERON:0007099 hyoid neural crest UBERON:0007099 Cranial neural crest that migrates into the hyoid arch. ZFA:0007065 hyoid crest XAO:0000025 A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified]. TADS:0000147 http://www.sciencemag.org/content/313/5795/1922/F1.large.jpg dorsal tube heart uberon adult heart UBERON:0007100 Gene notes: Bmp, Nkx, Gata primary circulatory organ UBERON:0007100 A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified]. GO:0007507 dorsal tube Wikipedia:Heart heart GO:0007507 adult heart FBbt:00003154 A pharyngeal pouch that is between pharyngeal arches 1 and 2. UBERON:0005718 AAO:0011114 EFO:0003631 EHDAA2:0000016 EMAPA:16124 EMAPA:16125 FMA:295668 NCIT:C34176 SCTID:345248006 TAO:0001128 VHOG:0000555 VHOG:0000970 Wikipedia:Pharyngeal_pouch_(embryology)#First_pouch XAO:0000102 ZFA:0001128 1st arch branchial pouch 1st arch branchial pouch endoderm 1st arch pouch endoderm 1st branchial pouch 1st pharyngeal pouch endoderm first arch pharyngeal pouch first visceral pouch hyomandibular pouch visceral pouch 1 uberon first pharyngeal pouch UBERON:0007122 pharyngeal pouch 1 UBERON:0007122 A pharyngeal pouch that is between pharyngeal arches 1 and 2. ISBN:0124020607 PMID:16313389 VHOG:0000970 1st arch branchial pouch EHDAA2:0000013 1st arch branchial pouch endoderm EHDAA2:0000016 1st arch pouch endoderm EHDAA2:0000016 1st pharyngeal pouch endoderm VHOG:0000555 first arch pharyngeal pouch OBOL:automatic first visceral pouch XAO:0000102 visceral pouch 1 XAO:0000102 first pharyngeal pouch VHOG:0000970 A pharyngeal puch that is between the pharyngeal arches 2 and 3. UBERON:0005715 AAO:0011115 EFO:0003633 EHDAA2:0000058 EMAPA:16275 FMA:295676 NCIT:C34289 RETIRED_EHDAA2:0000060 SCTID:345349000 TAO:0001130 VHOG:0000561 VHOG:0000967 Wikipedia:Pharyngeal_pouch_(embryology)#Second_pouch XAO:0000247 ZFA:0001130 2nd arch branchial pouch 2nd arch branchial pouch endoderm 2nd arch pouch endoderm 2nd branchial pouch 2nd pharyngeal pouch endoderm second arch pharyngeal pouch second visceral pouch visceral pouch 2 uberon second pharyngeal pouch UBERON:0007123 pharyngeal pouch 2 UBERON:0007123 A pharyngeal puch that is between the pharyngeal arches 2 and 3. ISBN:0124020607 PMID:16313389 2nd arch branchial pouch RETIRED_EHDAA2:0000060 2nd arch branchial pouch endoderm EHDAA2:0000061 2nd arch pouch endoderm EHDAA2:0000058 2nd pharyngeal pouch endoderm VHOG:0000561 second arch pharyngeal pouch OBOL:automatic second visceral pouch XAO:0000247 visceral pouch 2 XAO:0000247 second pharyngeal pouch VHOG:0000967 A pharyngeal pouch that between pharyngeal arches 3 and 4. UBERON:0005716 AAO:0011116 EFO:0003634 EHDAA2:0000077 EMAPA:16586 FMA:295682 NCIT:C34311 RETIRED_EHDAA2:0000076 SCTID:345450001 TAO:0001131 VHOG:0000966 VHOG:0001030 Wikipedia:Pharyngeal_pouch_(embryology)#Third_pouch XAO:0000251 ZFA:0001131 3rd arch branchial pouch 3rd arch branchial pouch endoderm 3rd branchial pouch 3rd pharyngeal pouch endoderm third arch pharyngeal pouch third visceral pouch visceral pouch 3 uberon third pharyngeal pouch UBERON:0007124 pharyngeal pouch 3 UBERON:0007124 A pharyngeal pouch that between pharyngeal arches 3 and 4. ISBN:0124020607 PMID:16313389 Wikipedia:Pharyngeal_pouch_(embryology)#Third_pouch 3rd arch branchial pouch RETIRED_EHDAA2:0000076 3rd arch branchial pouch endoderm EHDAA2:0000077 3rd pharyngeal pouch endoderm VHOG:0001030 third arch pharyngeal pouch OBOL:automatic third visceral pouch XAO:0000251 visceral pouch 3 XAO:0000251 third pharyngeal pouch VHOG:0000966 Ganglion which is located in the trunk. EFO:0000901 MAT:0000344 MIAA:0000344 TAO:0001573 ZFA:0001573 body ganglion uberon UBERON:0007134 trunk ganglion UBERON:0007134 Ganglion which is located in the trunk. ZFIN:curator body ganglion MAT:0000344 An intermediate stage (between the neural plate and neural rod) during the early segmentation period in the morphogenesis of the central nervous system primordium; the keel is roughly triangular shaped in cross section. EFO:0003497 TAO:0000131 ZFA:0000131 uberon presumptive central nervous system UBERON:0007135 neural keel UBERON:0007135 An intermediate stage (between the neural plate and neural rod) during the early segmentation period in the morphogenesis of the central nervous system primordium; the keel is roughly triangular shaped in cross section. ZFIN:ZDB-PUB-961014-576 presumptive central nervous system ZFA:0000131 An internal carotid artery that branching_part_of a left common carotid artery plus branches. EMAPA:16329 FMA:4062 SCTID:161452006 arteria caritis interna sinistra uberon UBERON:0007142 left internal carotid artery UBERON:0007142 An internal carotid artery that branching_part_of a left common carotid artery plus branches. OBOL:automatic arteria caritis interna sinistra FMA:4062 An internal carotid artery that branching_part_of a right common carotid artery plus branches. EMAPA:16330 FMA:3949 SCTID:161251001 arteria carotis interna dextra uberon UBERON:0007143 right internal carotid artery UBERON:0007143 An internal carotid artery that branching_part_of a right common carotid artery plus branches. OBOL:automatic arteria carotis interna dextra FMA:3949 A mesothelium that is part of a serous pericardium. BTO:0003157 EMAPA:16133 FMA:18149 SCTID:67300002 mesothelium of pericardium pericardial mesothelium serous pericardium mesothelium uberon UBERON:0007188 mesothelium of serous pericardium UBERON:0007188 A mesothelium that is part of a serous pericardium. OBOL:automatic mesothelium of pericardium FMA:18149 pericardial mesothelium FMA:18149 serous pericardium mesothelium FMA:18149 The stroma of the bone marrow is all tissue not directly involved in the primary function of hematopoiesis. The yellow bone marrow belongs here, and makes the majority of the bone marrow stroma, in addition to stromal cells located in the red bone marrow. Yellow bone marrow is found in the Medullary cavity. Still, the stroma is indirectly involved in hematopoiesis, since it provides the hematopoietic microenvironment that facilitates hematopoiesis by the parenchymal cells. For instance, they generate colony stimulating factors, affecting hematopoiesis. CALOHA:TS-0085 FMA:21426 Wikipedia:Bone_marrow#Stroma bone marrow stroma uberon UBERON:0007195 stroma of bone marrow UBERON:0007195 The stroma of the bone marrow is all tissue not directly involved in the primary function of hematopoiesis. The yellow bone marrow belongs here, and makes the majority of the bone marrow stroma, in addition to stromal cells located in the red bone marrow. Yellow bone marrow is found in the Medullary cavity. Still, the stroma is indirectly involved in hematopoiesis, since it provides the hematopoietic microenvironment that facilitates hematopoiesis by the parenchymal cells. For instance, they generate colony stimulating factors, affecting hematopoiesis. Wikipedia:Bone_marrow#Stroma bone marrow stroma FMA:21426 The structure from the trachea, bronchi, and bronchioles that forms the airways that supply air to the lungs. The lining of the tracheobronchial tree consists of ciliated columnar epithelial cells. UBERON:0004102 FMA:7393 NCIT:C117875 SCTID:361384001 Wikipedia:Tracheobronchial_tree uberon tracheobronchial system UBERON:0007196 tracheobronchial tree UBERON:0007196 The structure from the trachea, bronchi, and bronchioles that forms the airways that supply air to the lungs. The lining of the tracheobronchial tree consists of ciliated columnar epithelial cells. Wikipedia:Tracheobronchial_tree tracheobronchial system HP:0005607 The vasculature consisting of brachiocephalic arteries and veins. uberon UBERON:0007204 brachiocephalic vasculature UBERON:0007204 The vasculature consisting of brachiocephalic arteries and veins. http://orcid.org/0000-0002-6601-2165 Mesenchyme that develops_from a cranial neural crest. EFO:0003572 EHDAA2:0000735 EMAPA:16169 EMAPA:16271 EMAPA_RETIRED:16271 TAO:0000787 ZFA:0000787 head mesenchyme from cranial neural crest head mesenchyme from neural crest head neural crest derived mesenchyme uberon UBERON:0007213 mesenchyme derived from head neural crest UBERON:0007213 Mesenchyme that develops_from a cranial neural crest. OBOL:automatic head mesenchyme from neural crest EHDAA2:0000735 Mesenchyme that develops_from a trunk neural crest. EHDAA2:0002093 EMAPA:16182 TAO:0000999 ZFA:0000999 trunk mesenchyme from neural crest trunk neural crest derived mesenchyme uberon UBERON:0007214 mesenchyme derived from trunk neural crest UBERON:0007214 Mesenchyme that develops_from a trunk neural crest. OBOL:automatic trunk mesenchyme from neural crest EHDAA2:0002093 EHDAA2:0000031 EHDAA:583 EMAPA:16382 VHOG:0000510 ventral pharyngeal arch 1 uberon ventral mandibular arch ventral visceral arch 1 UBERON:0007237 1st arch mandibular component UBERON:0007237 ventral pharyngeal arch 1 VHOG:0000510 ventral mandibular arch VHOG:0000510 ventral visceral arch 1 VHOG:0000510 A tunica media that is part of a artery. EMAPA:36294 EV:0100029 FMA:14273 NCIT:C49321 SCTID:84300001 arterial media tunica media (arteriae) uberon UBERON:0007239 tunica media of artery UBERON:0007239 A tunica media that is part of a artery. OBOL:automatic arterial media EV:0100029 tunica media (arteriae) FMA:14273 A tunica adventitia that is part of a artery. EMAPA:36295 EV:0100030 FMA:14274 SCTID:113261001 arterial adventitia tunica externa (adventitia)(arteriae) uberon UBERON:0007240 tunica adventitia of artery UBERON:0007240 A tunica adventitia that is part of a artery. OBOL:automatic arterial adventitia EV:0100030 tunica externa (adventitia)(arteriae) FMA:14274 A tunica adventitia that is part of a vein. EMAPA:36310 EV:0100034 FMA:14355 SCTID:13202006 tunica externa (adventitia)(venae) venous adventitia uberon UBERON:0007241 tunica adventitia of vein UBERON:0007241 A tunica adventitia that is part of a vein. OBOL:automatic tunica externa (adventitia)(venae) FMA:14355 venous adventitia EV:0100034 A tunica intima that is part of a vein. EMAPA:36308 EV:0100032 FMA:14353 SCTID:2436009 tunica interna (intima)(venae) venous intima uberon UBERON:0007242 tunica intima of vein UBERON:0007242 A tunica intima that is part of a vein. OBOL:automatic tunica interna (intima)(venae) FMA:14353 venous intima EV:0100032 A tunica media that is part of a vein. EMAPA:36309 EV:0100033 FMA:14354 SCTID:42049001 tunica media (venae) venous media uberon UBERON:0007243 tunica media of vein UBERON:0007243 A tunica media that is part of a vein. OBOL:automatic tunica media (venae) FMA:14354 venous media EV:0100033 Gray matter of the central nervous system which is a collection of clustered nuclei. FMA:256381 FMA:84059 uberon cluster of neural nuclei neural nuclei nuclear complex UBERON:0007245 nuclear complex of neuraxis UBERON:0007245 Gray matter of the central nervous system which is a collection of clustered nuclei. http://orcid.org/0000-0002-6601-2165 Any of the nuclei that comprise the superior olivary complex (superior olive). This includes both the primary nuclei such as the lateral and medial nuclei, as well as periolivary nuclei. FMA:72246 SCTID:369024009 superior olivary complex nucleus uberon UBERON:0007247 nucleus of superior olivary complex UBERON:0007247 Any of the nuclei that comprise the superior olivary complex (superior olive). This includes both the primary nuclei such as the lateral and medial nuclei, as well as periolivary nuclei. http://orcid.org/0000-0002-6601-2165 superior olivary complex nucleus FMA:72246 A pre-cartilage condensation that is part of a trachea. EHDAA2:0002070 EHDAA:7082 uberon UBERON:0007267 trachea pre-cartilage rings UBERON:0007267 A pre-cartilage condensation that is part of a trachea. OBOL:automatic Any collection of muscles that is part of a pectoral appendage. EFO:0003540 TAO:0000563 ZFA:0000563 pectoral fin muscle uberon UBERON:0007269 pectoral appendage musculature UBERON:0007269 Any collection of muscles that is part of a pectoral appendage. OBOL:automatic pectoral fin muscle ZFA:0000563 Any collection of muscles that is part of an appendage. TAO:0000207 ZFA:0000207 uberon UBERON:0007271 appendage musculature UBERON:0007271 Any collection of muscles that is part of an appendage. OBOL:automatic Skeletal subdivision consisting of the anterior appendicular limb skeleton, excluding the pectoral girdle. VSAO:0005000 uberon cheiropterygium UBERON:0007272 pectoral appendage skeleton UBERON:0007272 Skeletal subdivision consisting of the anterior appendicular limb skeleton, excluding the pectoral girdle. VSAO:0005000 VSAO:NI cheiropterygium VSAO:0005000 VSAO:NI The rhombencephalon (or hindbrain) is a developmental categorization of portions of the central nervous system in vertebrates. The rhombencephalon can be subdivided in a variable number of transversal swellings called rhombomeres. In the human embryo eight rhombomeres can be distinguished, from caudal to rostral: Rh7-Rh1 and the isthmus (the most rostral rhombomere). A rare disease of the rhombencephalon, 'rhombencephalosynapsis' is characterized by a missing vermis resulting in a fused cerebellum. Patients generally present with cerebellar ataxia. The caudal rhombencephalon has been generally considered as the initiation site for neural tube closure. BAMS:HB CALOHA:TS-2118 EFO:0003440 EHDAA2:0001630 FMA:295640 TAO:0000569 Wikipedia:Rhombencephalon ZFA:0000569 presumptive rhombencephalon uberon embryonic rhombencephalon future hindbrain rhombencephalon UBERON:0007277 presumptive hindbrain UBERON:0007277 The rhombencephalon (or hindbrain) is a developmental categorization of portions of the central nervous system in vertebrates. The rhombencephalon can be subdivided in a variable number of transversal swellings called rhombomeres. In the human embryo eight rhombomeres can be distinguished, from caudal to rostral: Rh7-Rh1 and the isthmus (the most rostral rhombomere). A rare disease of the rhombencephalon, 'rhombencephalosynapsis' is characterized by a missing vermis resulting in a fused cerebellum. Patients generally present with cerebellar ataxia. The caudal rhombencephalon has been generally considered as the initiation site for neural tube closure. Wikipedia:Rhombencephalon presumptive rhombencephalon ZFA:0000569 embryonic rhombencephalon CALOHA:TS-2118 future hindbrain https://orcid.org/0000-0002-6601-2165 rhombencephalon EHDAA2:0001630 Portion of tissue that is part of the heart tube and will become the sinus venosus. TAO:0002234 ZFA:0001722 uberon UBERON:0007278 presumptive sinus venosus UBERON:0007278 Portion of tissue that is part of the heart tube and will become the sinus venosus. ZFA:0001722 A presumptive structure that has the potential to develop into a endocardium. TAO:0002233 ZFA:0001724 uberon UBERON:0007280 presumptive endocardium UBERON:0007280 A presumptive structure that has the potential to develop into a endocardium. OBOL:automatic Embryonic structure that gives rise to the midbrain hindbrain boundary. EFO:0003446 TAO:0001187 XAO:0004086 ZFA:0001187 presumptive MHB presumptive midbrain-hindbrain boundary uberon UBERON:0007281 presumptive midbrain hindbrain boundary UBERON:0007281 Embryonic structure that gives rise to the midbrain hindbrain boundary. ZFA:0001187 presumptive MHB https://orcid.org/0000-0002-6601-2165 presumptive midbrain-hindbrain boundary ZFA:0001187 A presumptive structure that has the potential to develop into a presomitic mesoderm. EFO:0003421 TAO:0000053 ZFA:0000053 uberon UBERON:0007282 presumptive segmental plate UBERON:0007282 A presumptive structure that has the potential to develop into a presomitic mesoderm. OBOL:automatic A presumptive structure that has the potential to develop into a neural plate. EFO:0003424 TAO:0000063 ZFA:0000063 prospective neuroectoderm prospective vegetal ectoderm uberon UBERON:0007284 presumptive neural plate UBERON:0007284 A presumptive structure that has the potential to develop into a neural plate. OBOL:automatic prospective neuroectoderm ZFA:0000063 prospective vegetal ectoderm ZFA:0000063 The part of the blastula that has the potential to develop into a paraxial mesoderm. EFO:0003443 TAO:0000591 XAO:0004134 ZFA:0000591 future paraxial mesenchyme future paraxial mesoderm uberon UBERON:0007285 presumptive paraxial mesoderm UBERON:0007285 The part of the blastula that has the potential to develop into a paraxial mesoderm. UBERON:cjm https://github.com/obophenotype/uberon/issues/1277 future paraxial mesenchyme UBERON:cjm A presumptive structure that has the potential to develop into a forebrain-midbrain boundary. EFO:0003463 TAO:0001368 ZFA:0001368 uberon UBERON:0007288 presumptive forebrain midbrain boundary UBERON:0007288 A presumptive structure that has the potential to develop into a forebrain-midbrain boundary. OBOL:automatic A blood vessel that is part of a pectoral appendage. TAO:0005301 ZFA:0005301 uberon UBERON:0007300 pectoral appendage blood vessel UBERON:0007300 A blood vessel that is part of a pectoral appendage. OBOL:automatic A blood vessel that is part of a limb/fin. TAO:0005299 ZFA:0005299 uberon UBERON:0007301 appendage blood vessel UBERON:0007301 A blood vessel that is part of a limb/fin. OBOL:automatic A vasculature that is part of a pectoral appendage. TAO:0005096 ZFA:0005096 uberon UBERON:0007302 pectoral appendage vasculature UBERON:0007302 A vasculature that is part of a pectoral appendage. OBOL:automatic A vasculature that is part of a chordate pharynx. TAO:0005003 ZFA:0005003 branchial vasculature uberon UBERON:0007303 pharyngeal vasculature UBERON:0007303 A vasculature that is part of a chordate pharynx. OBOL:automatic branchial vasculature ZFA:0005003 A vasculature that is part of a limb/fin. TAO:0005095 ZFA:0005095 uberon UBERON:0007304 appendage vasculature UBERON:0007304 A vasculature that is part of a limb/fin. OBOL:automatic An anatomical surface that is part of a tongue. FMA:54647 SCTID:314870004 tongue surface uberon UBERON:0007367 surface of tongue UBERON:0007367 An anatomical surface that is part of a tongue. OBOL:automatic tongue surface FMA:54647 The epidermis is the entire outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species[GO]. BSA:0000073 BTO:0000313 HAO:0000298 TADS:0000109 WBbt:0005733 Wikipedia:Epidermis_(zoology) epidermis epidermis (sensu Metazoa) outer epidermal layer outer epithelial layer uberon UBERON:0007376 outer epithelium UBERON:0007376 The epidermis is the entire outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species[GO]. GO:0008544 epidermis GO:0008544 Outermost layer of cells surrounding the embryo. EFO:0003425 TAO:0000086 ZFA:0000086 EVL enveloping layer uberon UBERON:0007383 enveloping layer of ectoderm UBERON:0007383 Outermost layer of cells surrounding the embryo. http://orcid.org/0000-0002-6601-2165 EVL ZFA:0000086 enveloping layer ZFIN:ZDB-PUB-961014-576 A cartilage tissue that is part of a paired limb or fin. TAO:0001543 ZFA:0001543 uberon UBERON:0007389 paired limb/fin cartilage UBERON:0007389 A cartilage tissue that is part of a paired limb or fin. http://orcid.org/0000-0002-6601-2165 A cartilage tissue that is part of a pectoral appendage. TAO:0000257 ZFA:0000257 uberon pectoral fin cartilage UBERON:0007390 pectoral appendage cartilage tissue UBERON:0007390 A cartilage tissue that is part of a pectoral appendage. OBOL:automatic pectoral fin cartilage TAO:0000257 A nucleus of brain that spans a midbrain tegmentum. UBERON:0012277 FMA:258768 ZFA:0005577 tegmental nucleus uberon UBERON:0007414 nucleus of midbrain tegmentum UBERON:0007414 A nucleus of brain that spans a midbrain tegmentum. OBOL:automatic tegmental nucleus ZFA:0005577 The space within an epithelial sphere. AEO:0000079 cavity of vesicle uberon UBERON:0007473 lumen of epithelial sac UBERON:0007473 The space within an epithelial sphere. AEO:JB cavity of vesicle AEO:0000079 A tissue whose predominant feature is extracellular matrix which may or may not be highly hydrated or calcified. AEO:0000081 EHDAA2:0003081 uberon UBERON:0007475 matrix-based tissue UBERON:0007475 A tissue whose predominant feature is extracellular matrix which may or may not be highly hydrated or calcified. AEO:JB An epithelial tube that is open at one end only. AEO:0000115 EHDAA2:0003115 uberon UBERON:0007499 epithelial sac UBERON:0007499 An epithelial tube that is open at one end only. AEO:JB UBERONREF:0000001 An epithelial tube open at both ends that allows fluid flow. AEO_RETIRED:0000116 RETIRED_EHDAA2:0003116 uberon UBERON:0007500 epithelial tube open at both ends UBERON:0007500 An epithelial tube open at both ends that allows fluid flow. AEO:JB UBERONREF:0000001 A closed epithelium with a lumen. AEO:0000119 EHDAA2:0003119 uberon UBERON:0007503 epithelial vesicle UBERON:0007503 A closed epithelium with a lumen. AEO:JB Mesenchyme with little extracellular matrix. AEO:0000146 EHDAA2:0003146 uberon UBERON:0007524 dense mesenchyme tissue UBERON:0007524 Mesenchyme with little extracellular matrix. AEO:JB Mesenchymal cells that are migrating. AEO:0000152 EHDAA2:0003152 uberon UBERON:0007530 migrating mesenchyme population UBERON:0007530 Mesenchymal cells that are migrating. AEO:JB Simple columnar epithelium in which the luminal side of the cells bears cilia. Examples: epithelium of trachea, epithelium of uterine tube.[FMA]. FMA:64798 uberon UBERON:0007592 ciliated columnar epithelium UBERON:0007592 Simple columnar epithelium in which the luminal side of the cells bears cilia. Examples: epithelium of trachea, epithelium of uterine tube.[FMA]. FMA:64798 Epithelium bearing vibratile cilia on the free surface. uberon UBERON:0007601 ciliated epithelium UBERON:0007601 Epithelium bearing vibratile cilia on the free surface. http://medical-dictionary.thefreedictionary.com/ciliated+epithelium A thin, loose vascular connective tissue that makes up the membranes surrounding joints and the sheaths protecting tendons (particularly flexor tendons in the hands and feet) where they pass over bony prominences. Synovial tissue contains synovial cells, which secrete a viscous liquid called synovial fluid; this liquid contains protein and hyaluronic acid and serves as a lubricant and nutrient for the joint cartilage surfaces[BTO]. Synovial tissue can be found in tendons (tissues that connect muscle to bone), bursae (fluid-filled, cushioning sacs found in spaces between tendons, ligaments, and bones), and the cavity (hollow enclosed area) that separates the bones of a freely movable joint, such as the knee or elbow[BTO]. BTO:0001338 CALOHA:TS-0998 FMA:66762 synovium stratum synoviale synovial layer synovial membrane uberon synovial tissue UBERON:0007616 layer of synovial tissue UBERON:0007616 A thin, loose vascular connective tissue that makes up the membranes surrounding joints and the sheaths protecting tendons (particularly flexor tendons in the hands and feet) where they pass over bony prominences. Synovial tissue contains synovial cells, which secrete a viscous liquid called synovial fluid; this liquid contains protein and hyaluronic acid and serves as a lubricant and nutrient for the joint cartilage surfaces[BTO]. Synovial tissue can be found in tendons (tissues that connect muscle to bone), bursae (fluid-filled, cushioning sacs found in spaces between tendons, ligaments, and bones), and the cavity (hollow enclosed area) that separates the bones of a freely movable joint, such as the knee or elbow[BTO]. BTO:0001338 http://www.britannica.com/EBchecked/topic/578563/synovial-tissue synovium CALOHA:TS-0998 stratum synoviale FMA:TA synovial layer FMA:66762 synovial membrane FMA:66762 synovial tissue BTO:0001338 An anatomical cavity that surrounded_by a synovial joint. FMA:11356 articular cavity (synovial joint) cavitas articularis (junctura synovialis) cavity of synovial joint uberon joint cavity synovial cavity UBERON:0007617 synovial cavity of joint UBERON:0007617 An anatomical cavity that surrounded_by a synovial joint. OBOL:automatic articular cavity (synovial joint) FMA:11356 cavitas articularis (junctura synovialis) FMA:11356 cavity of synovial joint FMA:11356 joint cavity FMA:11356 synovial cavity FMA:11356 Epithelial layer of the retina, ciliary body, or iris composed of cells containing pigment granules. GAID:907 MESH:D010857 uberon eye pigment epithelium UBERON:0007625 pigment epithelium of eye UBERON:0007625 Epithelial layer of the retina, ciliary body, or iris composed of cells containing pigment granules. MP:0005200 eye pigment epithelium MESH:A09.371.670 A neural nucleus that is part of a medulla oblongata. FMA:258772 SCTID:304943004 uberon UBERON:0007635 nucleus of medulla oblongata UBERON:0007635 A neural nucleus that is part of a medulla oblongata. OBOL:automatic The sensory trigeminal nerve nuclei are the largest of the cranial nerve nuclei, and extend through the whole of the midbrain, pons and medulla. There is also a distinct trigeminal motor nucleus that is medial to the chief sensory nucleus[WP]. BIRNLEX:4096 BM:V CALOHA:TS-2077 DHBA:266441713 FMA:71248 HBA:9203 Wikipedia:Trigeminal_nerve_nuclei neuronames:2021 trigeminal nuclei uberon UBERON:0007641 trigeminal nuclear complex UBERON:0007641 The sensory trigeminal nerve nuclei are the largest of the cranial nerve nuclei, and extend through the whole of the midbrain, pons and medulla. There is also a distinct trigeminal motor nucleus that is medial to the chief sensory nucleus[WP]. Wikipedia:Trigeminal_nerve_nuclei trigeminal nuclei FMA:71248 A developing mesenchymal capsule that covers the developing brain and spinal cord and is the precursor of the meningeal cluster. In mammals this gives rise to the arachnoid mater, pia mater and dura mater. In cyclostomes and fishes, the future meninx gives rise to a single meningeal layer, the primitive meninx. UBERON:0004065 EHDAA2:0004453 primary meninx uberon meninx primitiva primitive meninx primordial meninx UBERON:0007645 future meninx UBERON:0007645 A developing mesenchymal capsule that covers the developing brain and spinal cord and is the precursor of the meningeal cluster. In mammals this gives rise to the arachnoid mater, pia mater and dura mater. In cyclostomes and fishes, the future meninx gives rise to a single meningeal layer, the primitive meninx. http://orcid.org/0000-0002-6601-2165 primary meninx EHDAA2:0004453 meninx primitiva MP:0009726 The outermost layer of the mesenchymal capsule that surrounds the developing brain, of mixed paraxial mesoderm and neural crest origin. The ectomeninx forms the dura mater (both inner layer and outer chondrogenic layer). UBERON:0010115 EHDAA2:0004317 future dura mater uberon UBERON:0007647 ectomeninx UBERON:0007647 The outermost layer of the mesenchymal capsule that surrounds the developing brain, of mixed paraxial mesoderm and neural crest origin. The ectomeninx forms the dura mater (both inner layer and outer chondrogenic layer). ISBN:9781607950325 future dura mater EHDAA2:0004317 2 An anatomical structure that connects two structures. junction FMA:5898 SCTID:91833003 anatomical junction uberon UBERON:0007651 anatomical junction UBERON:0007651 An anatomical structure that connects two structures. http://code.google.com/p/caro2/issues/detail?id=15 Anlagen are populations of contiguous cells, typically arranged in one plane, that are morphologically indistinct, but that already correspond in extent to a later organ/tissue. field AEO:0000170 EFO:0001649 EHDAA2:0003170 Wikipedia:Anlage_(biology) developmental field uberon future organ organ field UBERON:0007688 anlage UBERON:0007688 Anlagen are populations of contiguous cells, typically arranged in one plane, that are morphologically indistinct, but that already correspond in extent to a later organ/tissue. FBbt:00005426 http://flybase.org/reports/FBrf0178740.html EFO:0003626 EHDAA2:0001457 EHDAA:962 TAO:0001104 ZFA:0001104 early pharyngeal arch endoderm uberon pharyngeal arch endoderm pharyngeal endoderm pharyngeal region endoderm UBERON:0007690 relation conflict: ZFA vs EHDAA2. Note EHDAA2 term renamed to 'early PA endoderm' early pharyngeal endoderm UBERON:0007690 early pharyngeal arch endoderm EHDAA2:0001457 pharyngeal endoderm ZFA:0001104 pharyngeal region endoderm EHDAA2:0001456 The minute opening of a taste bud on the surface of the oral mucosa through which the gustatory hairs of the specialised neuroepithelial gustatory cells project. FMA:63589 NCIT:C33738 SCTID:368724008 porus gustatorius taste pore uberon UBERON:0007691 gustatory pore UBERON:0007691 The minute opening of a taste bud on the surface of the oral mucosa through which the gustatory hairs of the specialised neuroepithelial gustatory cells project. http://www.mondofacto.com/facts/dictionary?gustatory+pore porus gustatorius http://www.mondofacto.com/facts/dictionary?gustatory+pore taste pore FMA:63589 A bone that is part of a reproductive organ. baculum uberon os penis/os clitoris UBERON:0007719 bone of reproductive organ UBERON:0007719 A bone that is part of a reproductive organ. OBOL:automatic https://github.com/obophenotype/uberon/issues/1158 A gland that is part of a epidermis. FMA:59153 epidermal gland gland of epidermis uberon UBERON:0007771 epidermis gland UBERON:0007771 A gland that is part of a epidermis. OBOL:automatic gland of epidermis FMA:59153 Any bodily fluid that has passed through a membrane such as the capillary wall, as a result of unbalanced hydrostatic and osmotic forces. FMA:12276 GAID:1195 MESH:D005122 ncithesaurus:Transudate uberon plasma ultrafiltrate UBERON:0007779 transudate UBERON:0007779 Any bodily fluid that has passed through a membrane such as the capillary wall, as a result of unbalanced hydrostatic and osmotic forces. http://medical-dictionary.thefreedictionary.com/transudate Any fluid produced by a serous gland. serous fluid Wikipedia:Serous_fluid serosal fluid serous gland fluid uberon UBERON:0007794 secretion of serous gland UBERON:0007794 Any fluid produced by a serous gland. UBERON:cjm serosal fluid Wikipedia:Serous_fluid Anatomical system that consists of all blood and lymph vessels. BTO:0001085 CALOHA:TS-2053 EHDAA2:0004520 EMAPA:35905 MA:0002718 NCIT:C33854 uberon UBERON:0007798 vascular system UBERON:0007798 Anatomical system that consists of all blood and lymph vessels. http://orcid.org/0000-0002-6601-2165 Adipose tissue that is located in the abdominal region. This includes any subcutaneous fat, visceral fat or encapsulated adipose tissue depots. CALOHA:TS-0002 EFO:0003771 uberon abdominal adipose tissue abdominal fat intra-abdominal fat UBERON:0007808 adipose tissue of abdominal region UBERON:0007808 Adipose tissue that is located in the abdominal region. This includes any subcutaneous fat, visceral fat or encapsulated adipose tissue depots. CALOHA:paula MGI:csmith http://orcid.org/0000-0002-6601-2165 https://github.com/obophenotype/uberon/issues/259 abdominal adipose tissue BTO:0004041 abdominal fat BTO:0004041 intra-abdominal fat BTO:0004041 The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae. CALOHA:TS-2356 EV:0100009 FMA:280881 MA:0000006 NCIT:C12418 SCTID:361355005 WikipediaCategory:Head_and_neck ZFA:0001114 galen:HeadAndNeck uberon cephalic area cephalic part of animal cephalic region head and neck head or neck UBERON:0007811 craniocervical region UBERON:0007811 The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae. https://orcid.org/0000-0002-6601-2165 cephalic area https://github.com/obophenotype/uberon/issues/379 cephalic part of animal Wikipedia:Head cephalic region https://github.com/obophenotype/uberon/issues/379 head and neck FMA:280881 An organism subdivision that encompasses the region containing the pectoral or pelvic girdle. Note that this includes both the skeletal elements and associated tissues (integument, muscle, etc). UBERON:0007824 girdle girdle region FMA:24874 VSAO:0000303 uberon UBERON:0007823 appendage girdle region UBERON:0007823 An organism subdivision that encompasses the region containing the pectoral or pelvic girdle. Note that this includes both the skeletal elements and associated tissues (integument, muscle, etc). UBERONREF:0000003 https://orcid.org/0000-0002-6601-2165 A bone that is part of a appendage girdle region. EMAPA:35379 MA:0000291 girdle bone uberon UBERON:0007828 girdle bone/zone UBERON:0007828 A bone that is part of a appendage girdle region. OBOL:automatic girdle bone MA:0000291 A bone that is part of a pectoral girdle region. EMAPA:35669 MA:0000292 bone of pectoral girdle uberon UBERON:0007829 pectoral girdle bone UBERON:0007829 A bone that is part of a pectoral girdle region. OBOL:automatic A subdivision of a limb or fin skeleton consisting of bones which connects the upper limb or fin to the axial skeleton on each side. It consists of the clavicle and scapula in humans and, in those species with three bones in the pectoral girdle, the coracoid. Some mammalian species (e.g. the dog and the horse) have only the scapula. In humans, the only joints between the shoulder girdle and axial skeleton are the sternoclavicular joints on each side. No joint exists between each scapula and the rib cage; instead the muscular connection between the two permits relatively great mobility of the shoulder girdle in relation to the pelvic girdle. In those species having only the scapula, no joint exists between the forelimb and the thorax, the only attachment being muscular[WP]. Examples: There are only two instances, right and left pectoral girdle skeletons. AAO:0000422 AAO:0000754 EFO:0000946 EHDAA2:0001420 FMA:24141 MAT:0000181 MIAA:0000181 NCIT:C33547 TAO:0000407 VHOG:0001156 VSAO:0000156 Wikipedia:Pectoral_girdle XAO:0003063 ZFA:0000407 skeletal parts of pectoral girdle skeleton of pectoral girdle uberon scapular girdle UBERON:0007831 pectoral girdle skeleton UBERON:0007831 A subdivision of a limb or fin skeleton consisting of bones which connects the upper limb or fin to the axial skeleton on each side. It consists of the clavicle and scapula in humans and, in those species with three bones in the pectoral girdle, the coracoid. Some mammalian species (e.g. the dog and the horse) have only the scapula. In humans, the only joints between the shoulder girdle and axial skeleton are the sternoclavicular joints on each side. No joint exists between each scapula and the rib cage; instead the muscular connection between the two permits relatively great mobility of the shoulder girdle in relation to the pelvic girdle. In those species having only the scapula, no joint exists between the forelimb and the thorax, the only attachment being muscular[WP]. Examples: There are only two instances, right and left pectoral girdle skeletons. Wikipedia:Pectoral_girdle skeletal parts of pectoral girdle https://orcid.org/0000-0002-6601-2165 skeleton of pectoral girdle https://orcid.org/0000-0002-6601-2165 scapular girdle TAO:0000407 Bone element that arises as a result of intramembranous ossification. AEO:0000085 EHDAA2:0003085 TAO:0001645 VSAO:0000023 XAO:0004014 ZFA:0001636 uberon UBERON:0007842 membrane bone UBERON:0007842 Bone element that arises as a result of intramembranous ossification. GO_REF:0000034 VSAO:0000023 http://dx.plos.org/10.1371/journal.pone.0051070 https://github.com/obophenotype/uberon/issues/267 Skeletal element that is composed of cartilage tissue and may be permanent or transient. AAO:0011130 CALOHA:TS-0118 FMA:55107 VSAO:0000000 XAO:0004013 ZFA:0001501 cartilage organ cartilaginous element chondrogenic element uberon cartilage UBERON:0007844 cartilage element UBERON:0007844 Skeletal element that is composed of cartilage tissue and may be permanent or transient. GO_REF:0000034 PSPUB:0000170 VSAO:0000000 http://dx.plos.org/10.1371/journal.pone.0051070 cartilage organ FMA:55107 cartilaginous element https://orcid.org/0000-0002-6601-2165 chondrogenic element VSAO:0000000 cartilage VSAO:0000000 Connective tissue, which consists of fibroblasts, the intercellular matrix of which contains a regular network of collagen and elastic fiber bundles. Examples: bone (tissue), cartilage (tissue), dense regular connective tissue. FMA:20103 uberon UBERON:0007845 regular connective tissue UBERON:0007845 Connective tissue, which consists of fibroblasts, the intercellular matrix of which contains a regular network of collagen and elastic fiber bundles. Examples: bone (tissue), cartilage (tissue), dense regular connective tissue. FMA:20103 Connective tissue that is dominated by collagen fibres organized into a definitive pattern (e.g., parallel to one another), with comparatively fewer cells (mostly fibroblasts). FMA:64781 NCIT:C33453 SCTID:22560007 VSAO:0000050 Wikipedia:Dense_regular_connective_tissue XAO:0004030 dense fibrous connective tissue dense regular collagenous connective tissue dense regular collagenous tissue regular dense connective tissue typus regularis (textus connectivus collagenosus compactus) uberon UBERON:0007846 dense regular connective tissue UBERON:0007846 Connective tissue that is dominated by collagen fibres organized into a definitive pattern (e.g., parallel to one another), with comparatively fewer cells (mostly fibroblasts). GO_REF:0000034 PSPUB:0000170 VSAO:0000050 http://dx.plos.org/10.1371/journal.pone.0051070 dense fibrous connective tissue FMA:64781 dense regular collagenous connective tissue FMA:64781 dense regular collagenous tissue FMA:64781 typus regularis (textus connectivus collagenosus compactus) FMA:64781 A bone that is part of a craniocervical region. MA:0000569 head or neck bone uberon cranial bone UBERON:0007914 bone of craniocervical region UBERON:0007914 A bone that is part of a craniocervical region. OBOL:automatic head or neck bone MA:0000569 The irregular bones are bones which, from their peculiar form, cannot be grouped as long bone, short bone, flat bone or sesamoid bone. Irregular bones serve various purposes in the body, such as protection of nervous tissue, affording multiple anchor points for skeletal muscle attachment (as with the sacrum), and maintaining pharynx and trachea support, and tongue attachment (such as the hyoid bone). They consist of cancellous tissue enclosed within a thin layer of compact bone. The irregular bones are: the vertebrC&, sacrum, coccyx, temporal, sphenoid, ethmoid, zygomatic, maxilla, mandible, palatine, inferior nasal concha, and hyoid. FMA:7477 NCIT:C32881 SCTID:421560006 Wikipedia:Irregular_bone os irregulare uberon UBERON:0008001 irregular bone UBERON:0008001 The irregular bones are bones which, from their peculiar form, cannot be grouped as long bone, short bone, flat bone or sesamoid bone. Irregular bones serve various purposes in the body, such as protection of nervous tissue, affording multiple anchor points for skeletal muscle attachment (as with the sacrum), and maintaining pharynx and trachea support, and tongue attachment (such as the hyoid bone). They consist of cancellous tissue enclosed within a thin layer of compact bone. The irregular bones are: the vertebrC&, sacrum, coccyx, temporal, sphenoid, ethmoid, zygomatic, maxilla, mandible, palatine, inferior nasal concha, and hyoid. Wikipedia:Irregular_bone A skeletal joint that is part of a appendage girdle region. MA:0001505 girdle joint uberon UBERON:0008114 joint of girdle UBERON:0008114 A skeletal joint that is part of a appendage girdle region. OBOL:automatic girdle joint OBOL:automatic An anatomical surface that is part of a cartilage element. FMA:76668 cartilage surface uberon UBERON:0008115 surface of cartilage UBERON:0008115 An anatomical surface that is part of a cartilage element. OBOL:automatic cartilage surface FMA:76668 A bone that is hollow or contains many air cells, such as the mastoid process of the temporal bone[TMD]. FMA:7478 SCTID:333008005 Wikipedia:Skeletal_pneumaticity galen:PneumaticBone os pneumaticum pneumatic bone uberon hollow bone UBERON:0008193 pneumatized bone UBERON:0008193 A bone that is hollow or contains many air cells, such as the mastoid process of the temporal bone[TMD]. http://www.medilexicon.com/medicaldictionary.php?t=11303 os pneumaticum FMA:7478 pneumatic bone FMA:7478 Any muscle organ that is part of a pectoral girdle region. FMA:37347 muscle of shoulder girdle pectoral girdle muscle uberon UBERON:0008196 muscle of pectoral girdle UBERON:0008196 Any muscle organ that is part of a pectoral girdle region. OBOL:automatic muscle of shoulder girdle FMA:37347 pectoral girdle muscle FMA:37347 Musculature system of the pharyngeal and head regions. MA:0000571 TAO:0000328 ZFA:0000328 head or neck muscle uberon head muscles head or neck muscle UBERON:0008229 craniocervical region musculature UBERON:0008229 Musculature system of the pharyngeal and head regions. ZFA:0000328 ZFA:curator head or neck muscle MA:0000571 head muscles ZFA:0000328 head or neck muscle MA:0000571 Subdivision of thorax, which in humans is the posterior part of the thorax and is demarcated from the chest by the external surface of the posterolateral part of the rib cage and the anterior surface of the thoracic vertebral column; together with the chest, it constitutes the thorax. FMA:24217 MA:0000028 SCTID:362666008 dorsum of thorax posterior part of thorax thoracic back thoracic part of back upper back uberon back of thorax UBERON:0008231 dorsal thoracic segment of trunk UBERON:0008231 Subdivision of thorax, which in humans is the posterior part of the thorax and is demarcated from the chest by the external surface of the posterolateral part of the rib cage and the anterior surface of the thoracic vertebral column; together with the chest, it constitutes the thorax. FMA:24217 dorsum of thorax FMA:24217 posterior part of thorax FMA:24217 thoracic back FMA:24217 thoracic part of back FMA:24217 upper back MA:0000028 back of thorax FMA:24217 A muscle of back that is part of a dorsal thoracic segment of trunk. MA:0000508 SCTID:305071003 uberon UBERON:0008243 upper back muscle UBERON:0008243 A muscle of back that is part of a dorsal thoracic segment of trunk. OBOL:automatic An endothelium that is part of a heart [Automatically generated definition]. BTO:0004293 uberon cardiac endothelium UBERON:0008307 heart endothelium UBERON:0008307 An endothelium that is part of a heart [Automatically generated definition]. OBOL:automatic cardiac endothelium BTO:0004293 BTO:0003122 uberon UBERON:0008339 microvascular endothelium UBERON:0008339 Epithelium pertaining to the trachea and bronchi. BTO:0002925 CALOHA:TS-1063 uberon bronchotracheal epithelium UBERON:0008397 tracheobronchial epithelium UBERON:0008397 Epithelium pertaining to the trachea and bronchi. Dorlands_Medical_Dictionary:MerckMedicus bronchotracheal epithelium BTO:0002925 An embryonic structure that is derived from the inner cell mass and lies above the hypoblast and gives rise to the three primary germ layers. EHDAA2:0000444 EHDAA:42 EHDAA:75 EMAPA:16050 NCIT:C34164 uberon embryonic epiblast UBERON:0008780 The epiblast cells (appearing on day 8 of human embryonic development) make up a columnar epithelium with dense microvilli on the apical surface. During gastrulation, the epiblast cells undergo epithelial-to-mesenchymal transition and delaminate to become the loose mesenchyme of the primitive streak. The epiblast is present in postimplantation mouse embryos between E5.5-E7.5. inner cell mass derived epiblast UBERON:0008780 An embryonic structure that is derived from the inner cell mass and lies above the hypoblast and gives rise to the three primary germ layers. MP:0003886 embryonic epiblast MP:0003886 A transient embryonic complex that comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming, which may include (depending on species) the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear[GO,modified]. EHDAA2:0000187 FMA:293041 NCIT:C34248 embryonic pharyngeal complex pharyngeal apparatus pharyngeal system uberon pharyngeal arch complex pharyngeal arch region pharyngeal arches and clefts pharyngeal complex UBERON:0008814 pharyngeal arch system UBERON:0008814 A transient embryonic complex that comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming, which may include (depending on species) the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear[GO,modified]. GO:0060037 GOC:dph pharyngeal system GO:0060037 pharyngeal arch region EHDAA2:0000187 A head that is part of a embryo. CALOHA:TS-0246 FMA:293011 uberon UBERON:0008816 embryonic head UBERON:0008816 A head that is part of a embryo. OBOL:automatic A brain that develops_from a neural tube. vertebrate brain uberon UBERON:0008823 neural tube derived brain UBERON:0008823 A brain that develops_from a neural tube. OBOL:automatic https://github.com/obophenotype/uberon/issues/338 Closed space within the ectoplacental cone, formed by the fusion of the parts of the amniotic fold that separate it from the amniotic cavity[MP]. a developmental cavity that exists in some mammals and is derived by division of the proamniotic space; it is further removed from the embryo than the amniotic cavity in some mammals. EMAPA:16080 epamniotic cavity uberon epamniotic cavity UBERON:0008851 ectoplacental cavity UBERON:0008851 Closed space within the ectoplacental cone, formed by the fusion of the parts of the amniotic fold that separate it from the amniotic cavity[MP]. a developmental cavity that exists in some mammals and is derived by division of the proamniotic space; it is further removed from the embryo than the amniotic cavity in some mammals. MP:0011207 http://www.medilexicon.com/medicaldictionary.php?s=epamniotic+cavity epamniotic cavity http://www.medilexicon.com/medicaldictionary.php?s=epamniotic+cavity epamniotic cavity MP:0011207 Any skeletal muscle organ in the hypodermis / superficial fascia. UBERON:0010934 EMAPA:18188 MA:0003140 hypodermal muscle layer hypodermis muscle layer superficial fascia muscular layer panniculus carnosus uberon UBERON:0008876 hypodermis skeletal muscle layer UBERON:0008876 Any skeletal muscle organ in the hypodermis / superficial fascia. ISBN:0123813611 MP:0011157 hypodermal muscle layer MP:0011157 hypodermis muscle layer MP:0011157 panniculus carnosus MP:0011157 Bone tissue that is an unmineralized bone matrix deposited by osteoblasts prior to the mineralization of bone tissue. FMA:66830 NCIT:C33228 SCTID:39365008 VSAO:0000046 Wikipedia:Osteoid XAO:0004035 galen:Osteoid osteoid tissue pre-bone prebone prebone tissue uberon UBERON:0008883 osteoid UBERON:0008883 Bone tissue that is an unmineralized bone matrix deposited by osteoblasts prior to the mineralization of bone tissue. GO_REF:0000034 VSAO:0000046 http://dx.plos.org/10.1371/journal.pone.0051070 osteoid tissue http://orcid.org/0000-0002-6601-2165 pre-bone PSPUB:0000170 prebone VSAO:curator prebone tissue FMA:66830 MP:0002113 The part of the cardiovascular system consisting of all pulmonary arteries and all pulmonary veins. FMA:45621 Wikipedia:Pulmonary_circulation pulmonary circulatory system pulmonary system uberon UBERON:0008886 pulmonary vascular system UBERON:0008886 The part of the cardiovascular system consisting of all pulmonary arteries and all pulmonary veins. ISBN:0073040584 Wikipedia:Pulmonary_circulation pulmonary circulatory system FMA:45621 pulmonary system ISBN:0073040584 Subdivision of endoskeleton derived from pharyngeal arches. AAO:0010157 TAO:0001216 VHOG:0000315 VSAO:0000149 Wikipedia:Facial_skeleton XAO:0003176 ZFA:0001216 pharyngeal endoskeleton uberon branchial arch skeleton gill arch skeleton pharyngeal arch skeleton pharyngeal skeleton visceral cranium visceral skeletal system visceral skeleton UBERON:0008895 splanchnocranium UBERON:0008895 Subdivision of endoskeleton derived from pharyngeal arches. ISBN:0073040584 Wikipedia:Facial_skeleton https://orcid.org/0000-0002-6601-2165 pharyngeal endoskeleton http://orcid.org/0000-0002-6601-2165 pharyngeal arch skeleton ZFA:0001216 pharyngeal skeleton ZFA:0001216 visceral cranium http://orcid.org/0000-0002-6601-2165 visceral skeletal system http://orcid.org/0000-0002-6601-2165 visceral skeleton UBERONREF:0000007 A pharyngeal arch that is posterior to the hyoid arch. i.e. any pharyngeal arch with a number 3 or higher. AAO:0010362 BTO:0002152 EFO:0003694 TAO:0001597 XAO:0000099 ZFA:0001613 branchial arch branchial bar gill arch gill arches 1-5 pharyngeal arch 3-7 visceral arches 3-7 uberon gill bar UBERON:0008896 post-hyoid pharyngeal arch UBERON:0008896 A pharyngeal arch that is posterior to the hyoid arch. i.e. any pharyngeal arch with a number 3 or higher. https://orcid.org/0000-0002-6601-2165 branchial arch ZFA:0001613 branchial bar ZFA:0001613 gill arch ZFA:0001613 gill arches 1-5 ZFA:0001613 pharyngeal arch 3-7 ZFA:0001613 visceral arches 3-7 ZFA:0001613 gill bar https://orcid.org/0000-0002-6601-2165 Skeletal element that forms superficially in the organism, usually in association with the ectoderm[VSAO]. AAO:0010769 TAO:0001590 VSAO:0000130 Wikipedia:Dermal_bone XAO:0004015 ZFA:0001590 uberon UBERON:0008907 dermal bone UBERON:0008907 Skeletal element that forms superficially in the organism, usually in association with the ectoderm[VSAO]. GO_REF:0000034 VSAO:0000130 http://dx.plos.org/10.1371/journal.pone.0051070 https://github.com/obophenotype/uberon/issues/267 Bone element that is adjacent to the notochord. AAO:0010777 TAO:0001639 VSAO:0000307 ZFA:0001629 uberon perichordal bone UBERON:0008909 perichordal bone UBERON:0008909 Bone element that is adjacent to the notochord. GO_REF:0000034 VSAO:0000307 http://dx.plos.org/10.1371/journal.pone.0051070 perichordal bone ZFA:0001629 A parenchyma that is part of a lung. EMAPA:35522 FMA:27360 MA:0003168 SCTID:201712001 respiratory portion of lung uberon parenchyma of lung pulmonary parenchyma UBERON:0008946 lung parenchyma UBERON:0008946 A parenchyma that is part of a lung. OBOL:automatic respiratory portion of lung FMA:27360 parenchyma of lung BTO:0000763 pulmonary parenchyma EMAPA:35522 EHDAA2:0004069 NCIT:C34283 uberon UBERON:0008947 respiratory primordium UBERON:0008947 System pertaining to blood vessels in the brain. UBERON:0005284 BTO:0003840 EFO:0003491 EMAPA:35186 FMA:242007 FMA:61935 SCTID:362029003 TAO:0000099 ZFA:0000099 brain vasculature cerebrovascular system intracerebral vasculature uberon UBERON:0008998 vasculature of brain UBERON:0008998 System pertaining to blood vessels in the brain. BTO:0003840 cerebrovascular system BTO:0003840 intracerebral vasculature FMA:61935 A zone of skin that is part of a dorsal thoracic segment of trunk. MA:0000510 SCTID:304890003 uberon UBERON:0009015 upper back skin UBERON:0009015 A zone of skin that is part of a dorsal thoracic segment of trunk. OBOL:automatic Vein that drains left lung and returns blood to the heart. MA:0002207 NCIT:C48946 SCTID:304057004 uberon UBERON:0009030 left pulmonary vein UBERON:0009030 Vein that drains left lung and returns blood to the heart. http://orcid.org/0000-0002-6601-2165 Vein that drains right lung and returns blood to the heart. MA:0002208 NCIT:C48947 SCTID:304056008 uberon UBERON:0009032 right pulmonary vein UBERON:0009032 Vein that drains right lung and returns blood to the heart. http://orcid.org/0000-0002-6601-2165 A gonad prior to differentiating into a definitive testis or ovary. EHDAA2:0000716 NCIT:C34192 uberon gonad rudiment UBERON:0009117 typically part of the embryo - however, in male tammar wallabies the gonads are indifferent at the neonatal stage[8827321] indifferent gonad UBERON:0009117 A gonad prior to differentiating into a definitive testis or ovary. http://www.medterms.com/script/main/art.asp?articlekey=8981 Epibranchial placode between geniculate and nodose. Associated with 2nd branchial cleft. EHDAA2:0004207 TAO:0001296 XAO:0004212 ZFA:0001296 epibranchial placode 2 glossopharyngeal IX placode glossopharyngeal epibranchial placode glossopharyngeal placode uberon UBERON:0009125 Taxonomic equivalence to EHDAA2 class made on basis of shared development: gives rise to glossopharyngeal ganglion petrosal placode UBERON:0009125 Epibranchial placode between geniculate and nodose. Associated with 2nd branchial cleft. NCBIBook:NBK53175 epibranchial placode 2 EHDAA2:0004207 glossopharyngeal IX placode ISBN:0471888893 glossopharyngeal epibranchial placode XAO:0004212 glossopharyngeal placode ISBN:0471888893 ZFA:0001296 Cranial ganglion which develops from an epibranchial placode. TAO:0001555 ZFA:0001555 uberon UBERON:0009127 Epibranchial ganglia orchestrate the development of the cranial neurogenic crest epibranchial ganglion UBERON:0009127 Cranial ganglion which develops from an epibranchial placode. PMID:20133851 ZFIN:curator Endocardium that is part of the right atrium. EHDAA2:0000274 FMA:7281 NCIT:C102339 SCTID:3194006 VHOG:0001228 endocardium of right atrium right atrial endocardium uberon right atrium endocardial tissue UBERON:0009129 right atrium endocardium UBERON:0009129 Endocardium that is part of the right atrium. http://orcid.org/0000-0002-6601-2165 endocardium of right atrium FMA:7281 right atrial endocardium FMA:7281 right atrium endocardial tissue VHOG:0001228 A fold of tissue which extends into the peritoneal cavity of the developing embryo and participates in the separation of the pleural and peritoneal cavities. UBERON:0009146 EHDAA2:0001483 EMAPA:17709 NCIT:C34256 SCTID:361429005 VHOG:0000757 Wikipedia:Pleuroperitoneal pleuroperitoneal fold uberon UBERON:0009133 pleuroperitoneal membrane UBERON:0009133 A fold of tissue which extends into the peritoneal cavity of the developing embryo and participates in the separation of the pleural and peritoneal cavities. Wikipedia:Pleuroperitoneal http://medical-dictionary.thefreedictionary.com/pleuroperitoneal+membrane pleuroperitoneal fold VHOG:0000757 A vein that is part of a craniocervical region. EHDAA2:0004542 SCTID:32945007 craniocervical vein head and neck veins vein of head and neck uberon UBERON:0009141 craniocervical region vein UBERON:0009141 A vein that is part of a craniocervical region. OBOL:automatic head and neck veins EHDAA2:0004542 Sum total of mesenchyme in the embryo. UBERON:0003313 EHDAA2:0001113 EHDAA:177 EMAPA:16097 uberon UBERON:0009142 entire embryonic mesenchyme UBERON:0009142 Sum total of mesenchyme in the embryo. https://github.com/obophenotype/human-developmental-anatomy-ontology/issues/7 EMAPA:16549 RETIRED_EHDAA2:0001454 pharyngeal region uberon UBERON:0009145 pharyngeal region of foregut UBERON:0009145 pharyngeal region EMAPA:16549 EHDAA2:0004021 uberon UBERON:0009196 indifferent external genitalia UBERON:0009196 2 Any suture between cranial and/or facial bones. joint of the skull bones uberon articulation of skull bones UBERON:0009198 craniofacial suture UBERON:0009198 Any suture between cranial and/or facial bones. GO:0097094 joint of the skull bones OBOL:automatic articulation of skull bones OBOL:automatic 2 Any suture between facial bones. uberon UBERON:0009199 facial suture UBERON:0009199 Any suture between facial bones. GO:0097096 The superior surface of the tongue divided by the sulcus terminalis into an anterior two-thirds, the presulcal part (pars presulcalis). and a posterior one-third, the postsulcal part (pars postsulcalis). FMA:54651 NCIT:C32482 SCTID:66938003 dorsal tongue dorsum linguae tongue dorsum uberon UBERON:0009471 dorsum of tongue UBERON:0009471 The superior surface of the tongue divided by the sulcus terminalis into an anterior two-thirds, the presulcal part (pars presulcalis). and a posterior one-third, the postsulcal part (pars postsulcalis). http://www.drugs.com/dict/dorsum-of-tongue.html dorsal tongue FMA:54651 dorsum linguae http://www.drugs.com/dict/dorsum-of-tongue.html tongue dorsum FMA:54651 An ectoderm that is part of a buccopharyngeal membrane. EHDAA2:0000190 EMAPA:16260 uberon UBERON:0009479 ectoderm of buccopharyngeal membrane UBERON:0009479 An ectoderm that is part of a buccopharyngeal membrane. OBOL:automatic An endoderm that is part of a buccopharyngeal membrane. EHDAA2:0000191 EMAPA:16261 uberon UBERON:0009480 endoderm of buccopharyngeal membrane UBERON:0009480 An endoderm that is part of a buccopharyngeal membrane. OBOL:automatic A portion of mesenchymal tissue associated with an individual pharyngeal arch. EMAPA:32755 FMA:295694 branchial arch mesenchyme pharyngeal arch mesenchyme uberon UBERON:0009494 pharyngeal arch mesenchymal region UBERON:0009494 A portion of mesenchymal tissue associated with an individual pharyngeal arch. https://orcid.org/0000-0002-6601-2165 branchial arch mesenchyme MP:0011262 pharyngeal arch mesenchyme https://orcid.org/0000-0002-6601-2165 Mesenchyme that is part of a developing trachea. EHDAA2:0002067 EMAPA:16854 trachea associated mesenchyme uberon UBERON:0009505 mesenchyme of trachea UBERON:0009505 Mesenchyme that is part of a developing trachea. OBOL:automatic trachea associated mesenchyme EHDAA2:0002067 An epithelium that is part of a lateral lingual swelling. EHDAA2:0000913 EMAPA:17190 FMA:313717 uberon UBERON:0009522 lateral lingual swelling epithelium UBERON:0009522 An epithelium that is part of a lateral lingual swelling. OBOL:automatic FMA:25054 SCTID:22943007 region of trunk trunk subdivision uberon UBERON:0009569 subdivision of trunk UBERON:0009569 region of trunk FMA:25054 trunk subdivision FMA:25054 A sulcus limitans of neural tube that is part of a future spinal cord. EHDAA2:0001265 EMAPA:17584 VHOG:0001548 spinal cord lateral wall sulcus limitans uberon UBERON:0009570 spinal cord sulcus limitans UBERON:0009570 A sulcus limitans of neural tube that is part of a future spinal cord. OBOL:automatic spinal cord lateral wall sulcus limitans EHDAA2:0001265 A sulcus limitans of neural tube that is part of a future medulla oblongata. EHDAA2:0001100 EMAPA:17561 uberon UBERON:0009576 medulla oblongata sulcus limitans UBERON:0009576 A sulcus limitans of neural tube that is part of a future medulla oblongata. OBOL:automatic A sulcus limitans of neural tube that is part of a future metencephalon. EHDAA2:0001161 EMAPA:17567 uberon UBERON:0009577 metencephalon sulcus limitans UBERON:0009577 A sulcus limitans of neural tube that is part of a future metencephalon. OBOL:automatic A sulcus limitans of neural tube that is part of a future myelencephalon. EHDAA2:0001945 uberon UBERON:0009578 myelencephalon sulcus limitans UBERON:0009578 A sulcus limitans of neural tube that is part of a future myelencephalon. OBOL:automatic EHDAA2:0000397 EMAPA:16906 VHOG:0000912 diencephalon lateral wall mantle layer mantle layer lateral wall diencephalon uberon UBERON:0009580 diencephalon mantle layer UBERON:0009580 mantle layer lateral wall diencephalon VHOG:0000912 EHDAA2:0001172 EMAPA:16977 VHOG:0000910 mantle layer lateral wall midbrain midbrain lateral wall mantle layer uberon mantle layer lateral wall mesencephalon UBERON:0009581 midbrain mantle layer UBERON:0009581 mantle layer lateral wall midbrain VHOG:0000910 mantle layer lateral wall mesencephalon VHOG:0000910 EMAPA:17580 VHOG:0000911 mantle layer lateral wall spinal cord spinal cord lateral wall mantle layer uberon UBERON:0009583 spinal cord mantle layer UBERON:0009583 mantle layer lateral wall spinal cord VHOG:0000911 Mesenchyme that is part of a 1st arch mandibular component. UBERON:0010043 EHDAA2:0000034 EMAPA:16385 mesenchymal region of mandibular component of first pharyngeal arch mesenchyme of mandibular component uberon mandibular component mesenchyme mandibular mesenchyme UBERON:0009584 1st arch mandibular mesenchyme UBERON:0009584 Mesenchyme that is part of a 1st arch mandibular component. OBOL:automatic mesenchymal region of mandibular component of first pharyngeal arch https://orcid.org/0000-0002-6601-2165 mesenchyme of mandibular component EMAPA:16385 Mesenchyme that is part of a developing left lung. EHDAA2:0000944 EMAPA:16730 EMAPA:17654 left lung mesenchyme uberon UBERON:0009602 left lung associated mesenchyme UBERON:0009602 Mesenchyme that is part of a developing left lung. OBOL:automatic left lung mesenchyme EMAPA:17654 Mesenchyme that is part of a developing right lung. EHDAA2:0001739 EMAPA:17662 right lung mesenchyme uberon UBERON:0009603 right lung associated mesenchyme UBERON:0009603 Mesenchyme that is part of a developing right lung. OBOL:automatic right lung mesenchyme EMAPA:17662 A neural plate that develops_from a future forebrain. TAO:0007018 ZFA:0007018 uberon UBERON:0009610 forebrain neural plate UBERON:0009610 A neural plate that develops_from a future forebrain. OBOL:automatic A neural plate that develops_from a presumptive midbrain. TAO:0007019 ZFA:0007019 uberon UBERON:0009611 midbrain neural plate UBERON:0009611 A neural plate that develops_from a presumptive midbrain. OBOL:automatic A neural plate that develops_from a presumptive hindbrain. TAO:0007022 ZFA:0007022 uberon UBERON:0009614 hindbrain neural plate UBERON:0009614 A neural plate that develops_from a presumptive hindbrain. OBOL:automatic TAO:0007044 ZFA:0007044 MHB neural plate midbrain-hindbrain boundary neural plate uberon UBERON:0009615 midbrain hindbrain boundary neural plate UBERON:0009615 MHB neural plate https://orcid.org/0000-0002-6601-2165 midbrain-hindbrain boundary neural plate ZFA:0007044 A presumptive structure that has the potential to develop into a midbrain. BAMS:MES EFO:0003432 EHDAA2:0000615 EMAPA:16140 TAO:0000148 Wikipedia:Mesencephalon ZFA:0000148 presumptive mesencephalon uberon early midbrain future midbrain mesencephalon UBERON:0009616 presumptive midbrain UBERON:0009616 A presumptive structure that has the potential to develop into a midbrain. OBOL:automatic presumptive mesencephalon ZFA:0000148 early midbrain https://orcid.org/0000-0002-6601-2165 future midbrain https://orcid.org/0000-0002-6601-2165 mesencephalon EHDAA2:0000615 Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles. EHDAA2:0000736 EHDAA:364 EMAPA:16171 cephalic paraxial mesenchyme cephalic paraxial mesoderm cranial paraxial mesenchyme cranial paraxial mesoderm head paraxial mesenchyme uberon somitomere somitomeric mesoderm UBERON:0009617 head paraxial mesoderm UBERON:0009617 Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles. PMID:21610022 cephalic paraxial mesenchyme https://orcid.org/0000-0002-6601-2165 cephalic paraxial mesoderm https://orcid.org/0000-0002-6601-2165 cranial paraxial mesenchyme https://orcid.org/0000-0002-6601-2165 cranial paraxial mesoderm https://orcid.org/0000-0002-6601-2165 head paraxial mesenchyme EHDAA2:0000736 https://github.com/obophenotype/uberon/issues/30 EHDAA2:0002094 trunk and cervical paraxial mesenchyme uberon trunk paraxial mesenchyme UBERON:0009618 trunk paraxial mesoderm UBERON:0009618 trunk and cervical paraxial mesenchyme EHDAA2:0002094 trunk paraxial mesenchyme https://github.com/obophenotype/uberon/issues/30 EMAPA:35878 MA:0001859 uberon UBERON:0009644 trachea non-cartilage connective tissue UBERON:0009644 A basement membrane that is part of a bronchus. MA:0001832 NCIT:C49208 bronchial basement membrane uberon UBERON:0009652 bronchus basement membrane UBERON:0009652 A basement membrane that is part of a bronchus. OBOL:automatic bronchial basement membrane http://orcid.org/0000-0002-6601-2165 A basement membrane that is part of a trachea. MA:0001854 NCIT:C49302 uberon UBERON:0009653 trachea basement membrane UBERON:0009653 A basement membrane that is part of a trachea. OBOL:automatic labial artery MA:0001987 NCIT:C52947 uberon UBERON:0009657 artery of lip UBERON:0009657 labial artery MA:0001987 Nucleus located in the midbrain. SCTID:279285003 TAO:0002209 ZFA:0001665 uberon UBERON:0009661 midbrain nucleus UBERON:0009661 Nucleus located in the midbrain. ZFIN:curator Nucleus located within the hindbrain. TAO:0002177 ZFA:0001658 uberon UBERON:0009662 hindbrain nucleus UBERON:0009662 Nucleus located within the hindbrain. ZFIN:curator A nucleus of brain that is part of a telencephalon. TAO:0002178 ZFA:0001660 uberon UBERON:0009663 telencephalic nucleus UBERON:0009663 A nucleus of brain that is part of a telencephalon. OBOL:automatic Any endocardium that is part of the right ventricle of the heart. EHDAA2:0002188 EMAPA:17341 FMA:9536 NCIT:C102343 SCTID:8911002 VHOG:0001235 right ventricle endocardium right ventricular endocardium uberon endocardial lining of right ventricle right ventricle endocardial tissue UBERON:0009712 endocardium of right ventricle UBERON:0009712 Any endocardium that is part of the right ventricle of the heart. http://orcid.org/0000-0002-6601-2165 right ventricle endocardium VHOG:0001235 right ventricular endocardium FMA:9536 endocardial lining of right ventricle EMAPA:17341 right ventricle endocardial tissue VHOG:0001235 Any endocardium that is part of the left ventricle of the heart. EHDAA2:0002182 EMAPA:17338 FMA:9559 SCTID:191004004 VHOG:0001233 left ventricle endocardium left ventricular endocardium uberon endocardial lining of left ventricle left ventricle endocardial tissue UBERON:0009713 endocardium of left ventricle UBERON:0009713 Any endocardium that is part of the left ventricle of the heart. http://orcid.org/0000-0002-6601-2165 left ventricle endocardium VHOG:0001233 left ventricular endocardium FMA:9559 endocardial lining of left ventricle EMAPA:17338 left ventricle endocardial tissue VHOG:0001233 An anatomical cavity that surrounded_by a stomodeum. lumen of stomatodaeum lumen of stomodeum stomatodeal cavity uberon UBERON:0009715 stomodeal lumen UBERON:0009715 An anatomical cavity that surrounded_by a stomodeum. OBOL:automatic EHDAA2:0004621 EMAPA:32754 FMA:293087 uberon pharyngeal arch endoderm UBERON:0009722 entire pharyngeal arch endoderm UBERON:0009722 pharyngeal arch endoderm EHDAA2:0004621 The embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the developing cardiac structures. EHDAA2:0004162 EMAPA:36438 heart mesenchyme uberon UBERON:0009751 cardiac mesenchyme UBERON:0009751 The embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the developing cardiac structures. MP:0011264 heart mesenchyme EMAPA:36438 A ganglion that is part of a abdominal segment of trunk. SCTID:280508003 uberon UBERON:0009758 abdominal ganglion UBERON:0009758 A ganglion that is part of a abdominal segment of trunk. OBOL:automatic A serous sac that has the pleura and the pleural cavity as parts. EHDAA2:0004737 FMA:9690 SCTID:361996004 uberon UBERON:0009778 pleural sac UBERON:0009778 A serous sac that has the pleura and the pleural cavity as parts. https://github.com/obophenotype/uberon/issues/86 The many-lobed berry cluster of cells that is the terminous of a gland where the secretion is produced is acinar in form. acinus FMA:55588 Wikipedia:Acinus uberon UBERON:0009842 glandular acinus UBERON:0009842 The many-lobed berry cluster of cells that is the terminous of a gland where the secretion is produced is acinar in form. Wikipedia:Acinus acinus FMA:55588 Branch or outpocketing of the digestive tract. uberon diverticulum of gut intestinal pouch UBERON:0009854 digestive tract diverticulum UBERON:0009854 Branch or outpocketing of the digestive tract. https://orcid.org/0000-0002-6601-2165 diverticulum of gut FBbt:00100316 galen:Diverticulum pouch uberon diverticulum UBERON:0009856 sac UBERON:0009856 A division of the stomach. The stomach can be divided based on mucosal histology (glandular epithelium and gastric glands) and the relative position and type of gastric gland. UBERON:0009034 EMAPA:35821 FMA:14558 MA:0002561 SCTID:245415005 Wikipedia:Stomach#Sections gastric zone region of stomach section of stomach uberon UBERON:0009870 zone of stomach UBERON:0009870 A division of the stomach. The stomach can be divided based on mucosal histology (glandular epithelium and gastric glands) and the relative position and type of gastric gland. ISBN:0073040584 Wikipedia:Stomach#Sections gastric zone FMA:14558 EFO:0003704 TAO:0005041 ZFA:0005041 ALPM uberon UBERON:0009881 anterior lateral plate mesoderm UBERON:0009881 ALPM ZFA:0005041 A specific region of the lateral mesoderm that will form the majority of the mesodermal component of the right ventricle, arterial pole (outflow tract) and venous pole (inflow tract). XAO:0004186 anterior heart field anterior/second heart field second heart field uberon SHF UBERON:0009889 secondary heart field UBERON:0009889 A specific region of the lateral mesoderm that will form the majority of the mesodermal component of the right ventricle, arterial pole (outflow tract) and venous pole (inflow tract). GO:0003139 GOC:mtg_heart GOC:rl anterior heart field PMID:17276708 anterior/second heart field Geisha:syn NCBITaxon:8782 second heart field XAO:0004186 SHF XAO:0004186 Mesenchyme that is part of a developing face. EMAPA:35337 FMA:302884 face mesenchyme mesenchyme of face uberon UBERON:0009891 facial mesenchyme UBERON:0009891 Mesenchyme that is part of a developing face. OBOL:automatic EHDAA2:0001315 EHDAA:1122 uberon UBERON:0009920 optic neural crest UBERON:0009920 A multicellular organism that existence_starts_with a post-embryonic stage. MA:0002405 postnatal organism TS28 mouse post-hatching organism post-natal organism postnatal mouse uberon UBERON:0009953 post-embryonic organism UBERON:0009953 A multicellular organism that existence_starts_with a post-embryonic stage. OBOL:automatic TS28 mouse MA:0002405 post-hatching organism https://orcid.org/0000-0002-6601-2165 post-natal organism https://orcid.org/0000-0002-6601-2165 postnatal mouse MA:0002405 Cranial ectodermal placode with potential to develop into a component of the nervous system, such as nerves or ganglia. EFO:0003460 TAO:0001309 Wikipedia:Neurogenic_placodes XAO:0004620 ZFA:0001309 uberon UBERON:0009955 neurogenic placode UBERON:0009955 Cranial ectodermal placode with potential to develop into a component of the nervous system, such as nerves or ganglia. PMID:11523831 http://orcid.org/0000-0002-6601-2165 An anatomical structure that has more than one cell as a part. CARO:0010000 multicellular structure uberon UBERON:0010000 multicellular anatomical structure UBERON:0010000 An anatomical structure that has more than one cell as a part. CARO:0010000 multicellular structure FBbt:00100313 A regional part of brain consisting of multiple brain regions that are not related through a simple volummetric part of hierarchy, e.g., basal ganglia[NIF]. NLXANAT:20090509 uberon set of nuclei of neuraxis UBERON:0010009 aggregate regional part of brain UBERON:0010009 A regional part of brain consisting of multiple brain regions that are not related through a simple volummetric part of hierarchy, e.g., basal ganglia[NIF]. NLXANAT:20090509 set of nuclei of neuraxis FMA:256381 Mesenchyme that is part of a pharyngeal arch 6. EHDAA2:0004076 EMAPA:32765 FMA:318209 6th pharyngeal arch mesenchyme uberon 6th branchial arch mesenchyme pharyngeal arch 6 mesenchyme UBERON:0010031 6th arch mesenchyme UBERON:0010031 Mesenchyme that is part of a pharyngeal arch 6. OBOL:automatic The portion of the tongue in front of the terminal sulcus. At the apex, thin and narrow, it is directed forward against the lingual surfaces of the lower incisor teeth. It is derived primarily from the first pharyngeal arch. FMA:229084 NCIT:C32130 Wikipedia:Anterior_tongue uberon anterior 2/3 of the tongue anterior 2/3 of tongue anterior two thirds of the tongue apex linguae apex of the tongue buccal part of the tongue front of the tongue oral part of the tongue UBERON:0010032 anterior part of tongue UBERON:0010032 The portion of the tongue in front of the terminal sulcus. At the apex, thin and narrow, it is directed forward against the lingual surfaces of the lower incisor teeth. It is derived primarily from the first pharyngeal arch. Wikipedia:Anterior_tongue anterior 2/3 of the tongue Wikipedia:Anterior_tongue anterior 2/3 of tongue Wikipedia:Anterior_tongue anterior two thirds of the tongue Wikipedia:Anterior_tongue apex linguae Wikipedia:Anterior_tongue apex of the tongue Wikipedia:Anterior_tongue buccal part of the tongue Wikipedia:Anterior_tongue front of the tongue Wikipedia:Anterior_tongue oral part of the tongue Wikipedia:Anterior_tongue An organ of the digestive tract that is capable of retaining and storing food. BSA:0000123 TADS:0000172 TGMA:0001041 uberon UBERON:0010039 food storage organ UBERON:0010039 An organ of the digestive tract that is capable of retaining and storing food. https://orcid.org/0000-0002-6601-2165 Mesenchyme that is part of a pharyngeal arch 1. EMAPA:16128 mesenchyme of 1st arch uberon UBERON:0010042 1st arch mesenchyme UBERON:0010042 Mesenchyme that is part of a pharyngeal arch 1. OBOL:automatic mesenchyme of 1st arch EMAPA:16128 The sum total of mesenchymal tissue in the pharyngeal arch region. Pharyngeal mesenchyme is undifferentiated, loose connective tissue derived mostly from mesoderm, and also contains ectodermally derived neural crest cells. EHDAA2:0001459 EMAPA:16550 XAO:0004524 associated mesenchyme of pharyngeal region entire branchial arch associated mesenchyme pharyngeal arch associated mesenchyme uberon UBERON:0010046 entire pharyngeal arch associated mesenchyme UBERON:0010046 The sum total of mesenchymal tissue in the pharyngeal arch region. Pharyngeal mesenchyme is undifferentiated, loose connective tissue derived mostly from mesoderm, and also contains ectodermally derived neural crest cells. XAO:0004524 https://orcid.org/0000-0002-6601-2165 associated mesenchyme of pharyngeal region EMAPA:16550 entire branchial arch associated mesenchyme https://orcid.org/0000-0002-6601-2165 pharyngeal arch associated mesenchyme EHDAA2:0001459 Gland of the epithelium lining the oral cavity. The most common are the salivary glands. UBERON:0003293 EHDAA2:0001327 EHDAA:2181 EMAPA:16572 EMAPA:16723 VHOG:0000652 buccal gland uberon gland of oral opening gland of oral region mouth gland oral cavity gland oral region gland UBERON:0010047 oral gland UBERON:0010047 Gland of the epithelium lining the oral cavity. The most common are the salivary glands. ISBN:0073040584 A mucosa that is part of a dorsum of tongue. FMA:74871 SCTID:245835003 mucosa of dorsal surface of tongue uberon UBERON:0010052 mucosa of dorsum of tongue UBERON:0010052 A mucosa that is part of a dorsum of tongue. OBOL:automatic A compound organ that has the potential to develop into a tongue. EHDAA2:0000696 EHDAA:2951 uberon UBERON:0010056 future tongue UBERON:0010056 A compound organ that has the potential to develop into a tongue. OBOL:automatic EHDAA2:0004610 uberon UBERON:0010059 hypoglossal cord UBERON:0010059 An anatomical space with at least one opening to another space or the exterior. AEO:0000221 EHDAA2:0004616 uberon UBERON:0010064 open anatomical space UBERON:0010064 An anatomical space with at least one opening to another space or the exterior. AEO:0000221 One of the 5 distinct and partially overlapping functional domains of the premigratory neural crest. The vagal and sacral neural crest cells develop into the ganglia of the enteric nervous system, also known as the parasympathetic ganglia. XAO:0004192 uberon UBERON:0010075 sacral neural crest UBERON:0010075 One of the 5 distinct and partially overlapping functional domains of the premigratory neural crest. The vagal and sacral neural crest cells develop into the ganglia of the enteric nervous system, also known as the parasympathetic ganglia. XB:curator http://www.ncbi.nlm.nih.gov/books/NBK10065/ An epithelium consisting of cuboidal epithelial cells. NCIT:C32415 Wikipedia:Cuboidal_epithelium uberon UBERON:0010077 cuboidal epithelium UBERON:0010077 An epithelium consisting of cuboidal epithelial cells. Wikipedia:Cuboidal_epithelium Mesenchyme that has the potential to develop into a dermis. EHDAA2:0000598 uberon UBERON:0010083 future dermis UBERON:0010083 Mesenchyme that has the potential to develop into a dermis. OBOL:automatic A structure that will develop into a diaphragm. EHDAA2:0000599 uberon UBERON:0010084 future diaphragm UBERON:0010084 A structure that will develop into a diaphragm. http://orcid.org/0000-0002-6601-2165 A multi-tissue structure that has the potential to develop into a meninx of hindbrain. EHDAA2:0000610 future hindbrain meninges uberon UBERON:0010091 future hindbrain meninx UBERON:0010091 A multi-tissue structure that has the potential to develop into a meninx of hindbrain. OBOL:automatic future hindbrain meninges EHDAA2:0000610 A developing anatomical structure that has the potential to develop into a metencephalon. EHDAA2:0000623 uberon UBERON:0010092 future metencephalon UBERON:0010092 A developing anatomical structure that has the potential to develop into a metencephalon. OBOL:automatic A developing anatomical structure that has the potential to develop into a myelencephalon. EHDAA2:0000640 uberon UBERON:0010096 future myelencephalon UBERON:0010096 A developing anatomical structure that has the potential to develop into a myelencephalon. OBOL:automatic A gray matter that has the potential to develop into a superior salivatory nucleus. EHDAA2:0004644 uberon UBERON:0010125 future superior salivatory nucleus UBERON:0010125 A gray matter that has the potential to develop into a superior salivatory nucleus. OBOL:automatic Any portion of cardiac muscle tissue that is part of the conducting system of heart or the Purkinje fibers. EHDAA2:0004528 FMA:83378 specialized conducting tissue of heart specialized muscle tissue of heart uberon UBERON:0010131 conducting tissue of heart UBERON:0010131 Any portion of cardiac muscle tissue that is part of the conducting system of heart or the Purkinje fibers. http://orcid.org/0000-0002-6601-2165 specialized conducting tissue of heart FMA:83378 specialized muscle tissue of heart FMA:83378 An epithelial sheet is a flat surface consisting of closely packed epithelial cells. uberon UBERON:0010136 epithelial sheet UBERON:0010136 An epithelial sheet is a flat surface consisting of closely packed epithelial cells. GO:0002011 An anatomical cavity that surrounded_by a blood vessel. FMA:312610 SCTID:91747007 blood vessel lumen uberon UBERON:0010161 lumen of blood vessel UBERON:0010161 An anatomical cavity that surrounded_by a blood vessel. OBOL:automatic A roughly circular bulge in a surface. AEO:0000205 EHDAA2:0003250 FMA:82506 uberon UBERON:0010188 protuberance UBERON:0010188 A roughly circular bulge in a surface. EHDAA2:0003250 EHDAA2:0004512 uberon UBERON:0010191 aortic system UBERON:0010191 One of the laterally paired arteries that supply the gonads. Wikipedia:Gonadal_artery gonadal artery uberon UBERON:0010192 genital artery UBERON:0010192 One of the laterally paired arteries that supply the gonads. ISBN:0073040584 Wikipedia:Gonadal_artery An anatomical boundary that corresponds to some physical discontinuity. CARO:0001004 uberon UBERON:0010199 One might argue that all boundaries are actually fiat in the sense that there must be some fiat element at a fine enough scale of granularity. This ontology choses to ignore this issue as below the level of granularity relevant to anatomy. (DOS121102) bona-fide anatomical boundary UBERON:0010199 An anatomical boundary that corresponds to some physical discontinuity. CARO:0001004 Apparatus located between the lungs and the buccal cavity. This apparatus is composed of a pair of arytenoid cartilages that are supported by the cricoid ring. AAO:0000267 EHDAA2:0000904 laryngeal cartilage system uberon UBERON:0010212 laryngeal apparatus UBERON:0010212 Apparatus located between the lungs and the buccal cavity. This apparatus is composed of a pair of arytenoid cartilages that are supported by the cricoid ring. AAO:0000267 laryngeal cartilage system EHDAA2:0000904 uberon UBERON:0010213 laryngeal pre-cartilage condensation UBERON:0010213 EHDAA2:0004085 uberon UBERON:0010221 Many sources say: thyroid cartilage from arch 4 other laryngeal cartilage (cricoid/arytenoid) from 6? laryngeal associated mesenchyme UBERON:0010221 A nuclear complex which in mammals consists of four parts, the hypothalamus, epithalamus, ventral thalamus, and dorsal thalamus[WP,modified]. EHDAA2:0004469 FMA:258745 uberon UBERON:0010225 thalamic complex UBERON:0010225 A nuclear complex which in mammals consists of four parts, the hypothalamus, epithalamus, ventral thalamus, and dorsal thalamus[WP,modified]. Wikipedia:Thalamus#Thalamic_nuclei Multi-tissue structure that is part of the heart tube and will become the cardiac atrium. FMA:71005 TAO:0002228 ZFA:0001718 presumptive atrium heart tube primordial atrium primordial cardiac atrium uberon UBERON:0010227 future cardiac atrium UBERON:0010227 Multi-tissue structure that is part of the heart tube and will become the cardiac atrium. ZFA:0001718 presumptive atrium heart tube ZFA:0001718 primordial atrium FMA:71005 primordial cardiac atrium FMA:71005 The core globe-shaped component of the camera-type eye. FMA:12513 MIAA:0000283 SCTID:244486005 VHOG:0001616 Wikipedia:Globe_(human_eye) bulbus oculi eye globe eyeball uberon globe UBERON:0010230 eyeball of camera-type eye UBERON:0010230 The core globe-shaped component of the camera-type eye. UBERON:cjm eye globe VHOG:0001616 eyeball FMA:12513 globe HP:0100886 MIAA:0000283 An exocrine gland whose secretions are excreted via exocytosis from secretory cells into an epithelial-walled duct or ducts and thence onto a bodily surface or into the lumen; the gland releases its product and no part of the gland is lost or damaged. BTO:0002324 MA:0003041 Wikipedia:Merocrine uberon UBERON:0010243 merocrine gland UBERON:0010243 An exocrine gland whose secretions are excreted via exocytosis from secretory cells into an epithelial-walled duct or ducts and thence onto a bodily surface or into the lumen; the gland releases its product and no part of the gland is lost or damaged. MGI:anna MP:0013544 Wikipedia:Merocrine Mesenchyme that develops_from a neural crest and is part of a 1st arch mandibular mesenchyme. EHDAA2:0000037 uberon UBERON:0010252 1st arch mandibular mesenchyme from neural crest UBERON:0010252 Mesenchyme that develops_from a neural crest and is part of a 1st arch mandibular mesenchyme. OBOL:automatic Mesenchyme that develops_from a neural crest and is part of a 2nd arch mesenchyme. EHDAA2:0000068 EMAPA:16281 neural crest derived arch 2 mesenchyme pharyngeal arch 2 mesenchyme from neural crest uberon branchial arch 2 mesenchyme from neural crest UBERON:0010254 2nd arch mesenchyme from neural crest UBERON:0010254 Mesenchyme that develops_from a neural crest and is part of a 2nd arch mesenchyme. OBOL:automatic Mesenchyme that develops_from a neural crest and is part of a 3rd arch mesenchyme. EHDAA2:0000083 EMAPA:16404 VHOG:0000571 3rd pharyngeal arch mesenchyme derived from neural crest mesenchyme derived from neural crest of mesenchyme of 3rd arch neural crest derived arch 3 mesenchyme pharyngeal arch 3 mesenchyme from neural crest uberon branchial arch 3 mesenchyme from neural crest UBERON:0010255 3rd arch mesenchyme from neural crest UBERON:0010255 Mesenchyme that develops_from a neural crest and is part of a 3rd arch mesenchyme. OBOL:automatic 3rd pharyngeal arch mesenchyme derived from neural crest VHOG:0000571 mesenchyme derived from neural crest of mesenchyme of 3rd arch EMAPA:16404 Mesenchyme that develops_from a neural crest and is part of a 4th arch mesenchyme. EHDAA2:0000098 EMAPA:16772 VHOG:0000580 4th pharyngeal arch mesenchyme derived from neural crest mesenchyme derived from neural crest of mesenchyme of 4th arch neural crest derived arch 4 mesenchyme pharyngeal arch 4 mesenchyme from neural crest uberon branchial arch 4 mesenchyme from neural crest UBERON:0010256 4th arch mesenchyme from neural crest UBERON:0010256 Mesenchyme that develops_from a neural crest and is part of a 4th arch mesenchyme. OBOL:automatic 4th pharyngeal arch mesenchyme derived from neural crest VHOG:0000580 mesenchyme derived from neural crest of mesenchyme of 4th arch EMAPA:16772 Mesenchyme that develops_from a neural crest and is part of a 6th arch mesenchyme. EHDAA2:0004077 neural crest derived arch 6 mesenchyme pharyngeal arch 6 mesenchyme from neural crest uberon branchial arch 6 mesenchyme from neural crest UBERON:0010257 6th arch mesenchyme from neural crest UBERON:0010257 Mesenchyme that develops_from a neural crest and is part of a 6th arch mesenchyme. OBOL:automatic Mesenchyme that develops_from a rhombencephalon neural crest. EHDAA2:0004423 uberon UBERON:0010258 mesenchyme from rhombencephalic neural crest UBERON:0010258 Mesenchyme that develops_from a rhombencephalon neural crest. OBOL:automatic Mesenchyme that develops_from a neural crest and is part of a 1st arch mesenchyme. EMAPA:16129 mesenchyme derived from neural crest of mesenchyme of 1st arch neural crest derived arch 1 mesenchyme pharyngeal arch 1 mesenchyme from neural crest uberon branchial arch 1 mesenchyme from neural crest UBERON:0010259 1st arch mesenchyme from neural crest UBERON:0010259 Mesenchyme that develops_from a neural crest and is part of a 1st arch mesenchyme. OBOL:automatic mesenchyme derived from neural crest of mesenchyme of 1st arch EMAPA:16129 A group of bones comprised of hyoid body and two pairs of cornua (i.e. greater cornua and lesser cornua), and lies just below the tongue, above the thyroid cartilage. AAO:0000225 AAO:0000682 MA:0003037 SCTID:410035009 http://palaeos.com/vertebrates/bones/gill_arches/images/ReptileHyoids.gif uberon apparatus hyoideus hyobranchial apparatus hyolingual system UBERON:0010272 hyoid apparatus UBERON:0010272 A group of bones comprised of hyoid body and two pairs of cornua (i.e. greater cornua and lesser cornua), and lies just below the tongue, above the thyroid cartilage. http://www.biology-online.org/dictionary/Hyoid_apparatus apparatus hyoideus http://www.biology-online.org/dictionary/Hyoid_apparatus hyobranchial apparatus AAO:0000225 hyolingual system AAO:0000225 Portion of tissue that is dorsolateral to the floor plate and part of the midbrain. DHBA:12322 EFO:0003567 EHDAA2:0004375 TAO:0000761 ZFA:0000761 basal plate midbrain basal plate midbrain region uberon UBERON:0010285 midbrain basal plate UBERON:0010285 Portion of tissue that is dorsolateral to the floor plate and part of the midbrain. ZFA:0000761 basal plate midbrain TAO:0000761 basal plate midbrain region ZFA:0000761 Portion of neural tube that gives rise to the midbrain. TAO:0007039 ZFA:0007039 uberon UBERON:0010286 midbrain neural tube UBERON:0010286 Portion of neural tube that gives rise to the midbrain. ZFA:0007039 Wikipedia:Sclera#Histology uberon UBERON:0010291 layer of sclera UBERON:0010291 An endothelium that is part of a sclera. uberon UBERON:0010294 scleral endothelium UBERON:0010294 An endothelium that is part of a sclera. OBOL:automatic A stroma that is part of a sclera. subsantia propria FMA:58365 NCIT:C33652 SCTID:368851004 scleral stroma stroma of sclera subsantia propria sclerae uberon UBERON:0010295 substantia propria of sclera UBERON:0010295 A stroma that is part of a sclera. OBOL:automatic scleral stroma FMA:58365 stroma of sclera FMA:58365 subsantia propria sclerae FMA:58365 Mesenchyme surrounding the developing optic cup which develops into the sclera. uberon UBERON:0010299 scleral mesenchyme UBERON:0010299 Mesenchyme surrounding the developing optic cup which develops into the sclera. PMID:16496288 https://orcid.org/0000-0002-6601-2165 An epithelium that is part of a extraembryonic structure. extra-embryonic epithelium uberon UBERON:0010303 extraembryonic epithelium UBERON:0010303 An epithelium that is part of a extraembryonic structure. OBOL:automatic Developing anatomical structure that develops into the eyeball and associated structures. TAO:0002201 ZFA:0001678 future eye uberon UBERON:0010312 immature eye UBERON:0010312 Developing anatomical structure that develops into the eyeball and associated structures. ZFA:0001678 An anatomical structure that develops from the neural crest. uberon UBERON:0010313 neural crest-derived structure UBERON:0010313 An anatomical structure that develops from the neural crest. https://orcid.org/0000-0002-6601-2165 An anatomical structure that has some part that develops from the neural crest. uberon UBERON:0010314 structure with developmental contribution from neural crest UBERON:0010314 An anatomical structure that has some part that develops from the neural crest. https://orcid.org/0000-0002-6601-2165 uberon UBERON:0010316 germ layer / neural crest UBERON:0010316 A skeletal element that is part of a orbital region. uberon eye skeleton ocular skeleton skeletal element of orbital region UBERON:0010321 skeletal element of eye region UBERON:0010321 A skeletal element that is part of a orbital region. OBOL:automatic Skeletal subdivision of the head including skull (cranium plus mandible), pharyngeal and/or hyoid apparatus. AAO:0000109 AAO:0000971 AAO:0010185 TAO:0000737 VSAO:0000049 XAO:0003075 ZFA:0000737 cranial skeleton osteocranium uberon UBERON:0010323 cranial skeletal system UBERON:0010323 Skeletal subdivision of the head including skull (cranium plus mandible), pharyngeal and/or hyoid apparatus. GO_REF:0000034 PSPUB:0000170 VSAO:0000049 http://dx.plos.org/10.1371/journal.pone.0051070 Mesenchyme that is part of a limb/fin bud. uberon UBERON:0010329 paired limb/fin bud mesenchyme UBERON:0010329 Mesenchyme that is part of a limb/fin bud. OBOL:automatic Mesenchyme that is part of a extraembryonic membrane. uberon UBERON:0010333 extraembryonic membrane mesenchyme UBERON:0010333 Mesenchyme that is part of a extraembryonic membrane. OBOL:automatic Mesenchyme that develops_from a neural crest and is part of a mandibular process mesenchyme. EHDAA2:0004603 uberon UBERON:0010336 mandibular process mesenchyme from neural crest UBERON:0010336 Mesenchyme that develops_from a neural crest and is part of a mandibular process mesenchyme. OBOL:automatic Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a mandibular process mesenchyme. EHDAA2:0004604 uberon UBERON:0010337 mandibular process mesenchyme from head mesenchyme UBERON:0010337 Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a mandibular process mesenchyme. OBOL:automatic Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch mandibular mesenchyme. EHDAA2:0000036 uberon UBERON:0010339 1st arch mandibular mesenchyme from head mesenchyme UBERON:0010339 Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch mandibular mesenchyme. OBOL:automatic Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch mesenchyme. EMAPA:16130 mesenchyme derived from head mesoderm of mesenchyme of 1st arch uberon UBERON:0010341 1st arch mesenchyme from head mesenchyme UBERON:0010341 Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch mesenchyme. OBOL:automatic mesenchyme derived from head mesoderm of mesenchyme of 1st arch EMAPA:16130 Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 2nd arch mesenchyme. EHDAA2:0000067 EMAPA:16280 head mesenchyme derived arch 2 mesenchyme mesenchyme derived from head mesoderm of mesenchyme of 2nd arch pharyngeal arch 2 mesenchyme from head mesenchyme uberon branchial arch 2 mesenchyme from head mesenchyme UBERON:0010343 2nd arch mesenchyme from head mesenchyme UBERON:0010343 Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 2nd arch mesenchyme. OBOL:automatic mesenchyme derived from head mesoderm of mesenchyme of 2nd arch EMAPA:16280 Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 3rd arch mesenchyme. EHDAA2:0000082 EMAPA:16403 head mesenchyme derived arch 3 mesenchyme mesenchyme derived from head mesoderm of mesenchyme of 3rd arch pharyngeal arch 3 mesenchyme from head mesenchyme uberon branchial arch 3 mesenchyme from head mesenchyme UBERON:0010344 3rd arch mesenchyme from head mesenchyme UBERON:0010344 Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 3rd arch mesenchyme. OBOL:automatic mesenchyme derived from head mesoderm of mesenchyme of 3rd arch EMAPA:16403 Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 4th arch mesenchyme. EHDAA2:0000097 EMAPA:16771 head mesenchyme derived arch 4 mesenchyme mesenchyme derived from head mesoderm of mesenchyme of 4th arch pharyngeal arch 4 mesenchyme from head mesenchyme uberon branchial arch 4 mesenchyme from head mesenchyme UBERON:0010345 4th arch mesenchyme from head mesenchyme UBERON:0010345 Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 4th arch mesenchyme. OBOL:automatic mesenchyme derived from head mesoderm of mesenchyme of 4th arch EMAPA:16771 Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 6th arch mesenchyme. EHDAA2:0004078 head mesenchyme derived arch 6 mesenchyme pharyngeal arch 6 mesenchyme from head mesenchyme uberon branchial arch 6 mesenchyme from head mesenchyme UBERON:0010347 6th arch mesenchyme from head mesenchyme UBERON:0010347 Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 6th arch mesenchyme. OBOL:automatic Mesenchyme that develops_from a neural crest and is part of a entire pharyngeal arch associated mesenchyme. arch mesenchyme from neural crest branchial arch mesenchyme from neural crest neural crest derived arch mesenchyme uberon UBERON:0010359 Partially implements https://github.com/obophenotype/uberon/wiki/The-neural-crest NC meeting scheme pharyngeal arch mesenchyme from neural crest UBERON:0010359 Mesenchyme that develops_from a neural crest and is part of a entire pharyngeal arch associated mesenchyme. OBOL:automatic Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a entire pharyngeal arch associated mesenchyme. arch mesenchyme from head mesenchyme branchial arch mesenchyme from head mesenchyme head mesenchyme derived arch mesenchyme uberon UBERON:0010360 Partially implements https://github.com/obophenotype/uberon/wiki/The-neural-crest NC meeting scheme pharyngeal arch mesenchyme from head mesenchyme UBERON:0010360 Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a entire pharyngeal arch associated mesenchyme. OBOL:automatic Skeletal subdivision that undergoes indirect development and includes elements that develop as a replacement or substitution of other elements or tissues. VSAO:0000037 Wikipedia:Endoskeleton XAO:0004026 replacement skeleton uberon UBERON:0010362 endoskeleton UBERON:0010362 Skeletal subdivision that undergoes indirect development and includes elements that develop as a replacement or substitution of other elements or tissues. GO_REF:0000034 PSPUB:0000170 VSAO:0000037 http://dx.plos.org/10.1371/journal.pone.0051070 replacement skeleton VSAO:curator A skeletal element that has the potential to participate in endochondral ossification, and may participate in intramembranous ossification. VSAO:0000139 XAO:0004017 ZFA:0005620 endochondral replacement element uberon UBERON:0010363 endochondral element UBERON:0010363 A skeletal element that has the potential to participate in endochondral ossification, and may participate in intramembranous ossification. GO_REF:0000034 PSPUB:0000170 VSAO:0000139 http://dx.plos.org/10.1371/journal.pone.0051070 endochondral replacement element VSAO:0000139 Skeletal subdivision that undergoes direct development and includes elements that either develop in association with the basement membrane of the ectoderm or are homologous with such elements; includes dermatocranium, components of the appendicular skeleton, teeth and tooth-like elements of the oropharynx, and integumentary elements. VSAO:0000035 XAO:0004025 uberon dermal skeletal system dermoskeleton desmoskeleton UBERON:0010364 This ontology covers metazoa, so we do not use exoskeleton as primary label, as in VSAO dermal skeleton UBERON:0010364 Skeletal subdivision that undergoes direct development and includes elements that either develop in association with the basement membrane of the ectoderm or are homologous with such elements; includes dermatocranium, components of the appendicular skeleton, teeth and tooth-like elements of the oropharynx, and integumentary elements. GO_REF:0000034 PSPUB:0000170 VSAO:0000035 http://dx.plos.org/10.1371/journal.pone.0051070 dermal skeletal system VSAO:curator dermoskeleton VSAO:curator desmoskeleton VSAO:curator Epithelium composed of cells that develops from the ectoderm[FMA,modified]. FMA:69064 ectoderm-derived epithelium uberon UBERON:0010371 ecto-epithelium UBERON:0010371 Epithelium composed of cells that develops from the ectoderm[FMA,modified]. FMA:69064 Mesenchyme that develops_from a somatopleure. EHDAA2:0001120 uberon UBERON:0010377 mesenchyme from somatopleure UBERON:0010377 Mesenchyme that develops_from a somatopleure. OBOL:automatic Mesenchyme that develops_from a splanchnopleure. EHDAA2:0001122 uberon UBERON:0010378 mesenchyme from splanchnopleure UBERON:0010378 Mesenchyme that develops_from a splanchnopleure. OBOL:automatic The integrated unit (of the eye) that consists of the conjunctiva, the corneal surface, and the ocular mucosal adnexa including the lid margins and the meibomian gland openings, the lacrimal glands and the lacrimal drainage system, all which are critical to maintain ocular surface integrity and provide protection from external antigens and pathogenic microorganisms. EMAPA:35336 MA:0002486 eye surface eye surface region ocular surface uberon UBERON:0010409 ocular surface region UBERON:0010409 The integrated unit (of the eye) that consists of the conjunctiva, the corneal surface, and the ocular mucosal adnexa including the lid margins and the meibomian gland openings, the lacrimal glands and the lacrimal drainage system, all which are critical to maintain ocular surface integrity and provide protection from external antigens and pathogenic microorganisms. MP:0013754 eye surface MA:0002486 The ciliary processes are formed by the inward folding of the various layers of the choroid, i.e. , the choroid proper and the lamina basalis, and are received between corresponding foldings of the suspensory ligament of the lens. FMA:76551 SCTID:280860001 Wikipedia:Ciliary_processes ciliary processes ciliary processes set set of ciliary processes uberon ciliary process UBERON:0010427 ciliary processes UBERON:0010427 The ciliary processes are formed by the inward folding of the various layers of the choroid, i.e. , the choroid proper and the lamina basalis, and are received between corresponding foldings of the suspensory ligament of the lens. Wikipedia:Ciliary_processes ciliary processes FMA:76551 ciliary processes set FMA:76551 set of ciliary processes FMA:76551 ciliary process Wikipedia:Ciliary_processes A bone that is shaped as a broad flat plate and composed of two thin layers of compact tissue enclosing between them a variable quantity of cancellous tissue, which is the location of red bone marrow. FMA:7476 NCIT:C32616 SCTID:332907008 Wikipedia:Flat_bone galen:FlatBone uberon UBERON:0010428 Examples: cranium, the ilium, sternum, rib cage, the sacrum and the scapula; the occipital, parietal, frontal, nasal, lacrimal, vomer, scapula, os coxC&, sternum, and ribs flat bone UBERON:0010428 A bone that is shaped as a broad flat plate and composed of two thin layers of compact tissue enclosing between them a variable quantity of cancellous tissue, which is the location of red bone marrow. Wikipedia:Flat_bone A simple columnar epithelium that looks stratified but is not, because its cells are arranged with their nuclei at different levels. FMA:45572 NCIT:C33419 NCIT:C49316 Wikipedia:Pseudostratified_columnar_epithelium uberon UBERON:0010498 pseudostratified columnar epithelium UBERON:0010498 A simple columnar epithelium that looks stratified but is not, because its cells are arranged with their nuclei at different levels. Wikipedia:Pseudostratified_columnar_epithelium http://medical-dictionary.thefreedictionary.com/pseudostratified+epithelium Epithelium composed of a single layer of cells, appearing as layered because the column-shaped cells vary in height so the nuclei are at different levels. The basal portions of all the cells are in contact with the basement membrane. It lines the respiratory system and the male reproductive tract. The cilia in the respiratory tract are motile, while the stereocilia in the male reproductive tract are immobile. FMA:13146 NCIT:C13181 epithelium pseudostratificatum columnare ciliatum (trachea et bronchi) uberon UBERON:0010499 pseudostratified ciliated columnar epithelium UBERON:0010499 Epithelium composed of a single layer of cells, appearing as layered because the column-shaped cells vary in height so the nuclei are at different levels. The basal portions of all the cells are in contact with the basement membrane. It lines the respiratory system and the male reproductive tract. The cilia in the respiratory tract are motile, while the stereocilia in the male reproductive tract are immobile. NCIT:NCIT epithelium pseudostratificatum columnare ciliatum (trachea et bronchi) FMA:13146 Skeletal element that forms as a replacement or substitution of another element or tissue. VSAO:0000135 XAO:0004016 ZFA:0005624 uberon UBERON:0010522 replacement element UBERON:0010522 Skeletal element that forms as a replacement or substitution of another element or tissue. GO_REF:0000034 PSPUB:0000170 VSAO:0000135 http://dx.plos.org/10.1371/journal.pone.0051070 A vessel of the microcirculature, lying between the arterioles and venules; includes capillaries (blood and lymphatic), metarterioles and arteriovenous anastomoses. MESH:D055806 TAO:0005251 ZFA:0005251 uberon UBERON:0010523 microcirculatory vessel UBERON:0010523 A vessel of the microcirculature, lying between the arterioles and venules; includes capillaries (blood and lymphatic), metarterioles and arteriovenous anastomoses. MESH:A07.231.432 ZFA:0005251 http://orcid.org/0000-0002-6601-2165 An organ cavity that surrounded_by a bone. FMA:24021 bone organ cavity uberon UBERON:0010527 cavity of bone organ UBERON:0010527 An organ cavity that surrounded_by a bone. OBOL:automatic bone organ cavity FMA:24021 FMA:24028 air space of bone uberon UBERON:0010528 pneumatic cavity of bone UBERON:0010528 air space of bone FMA:24028 An organism subdivision that includes both an appendage and its associated girdle region. Note that this includes both the skeletal elements and associated tissues (integument, muscle, etc). 2012-04-23T10:46:51Z FMA:7182 VSAO:0000214 appendage complex appendage-girdle complex appendage/girdle complex girdle plus limb or fin uberon UBERON:0010707 appendage girdle complex UBERON:0010707 An organism subdivision that includes both an appendage and its associated girdle region. Note that this includes both the skeletal elements and associated tissues (integument, muscle, etc). https://github.com/obophenotype/uberon/wiki/Appendages-and-the-appendicular-skeleton https://orcid.org/0000-0002-6601-2165 appendage complex https://orcid.org/0000-0002-6601-2165 appendage-girdle complex https://orcid.org/0000-0002-6601-2165 appendage/girdle complex VSAO:0000214 girdle plus limb or fin https://orcid.org/0000-0002-6601-2165 Appendage girdle complex that when present, encompasses the pectoral appendicular skeleton and the pectoral girdle. FMA:7183 SCTID:110716002 VSAO:0000213 pectoral appendage/girdle complex pectoral girdle plus anterior limb or fin pectoral girdle plus pectoral limb or fin uberon upper limb and shoulder UBERON:0010708 pectoral complex UBERON:0010708 Appendage girdle complex that when present, encompasses the pectoral appendicular skeleton and the pectoral girdle. VSAO:0000213 pectoral appendage/girdle complex VSAO:0000213 pectoral girdle plus anterior limb or fin https://orcid.org/0000-0002-6601-2165 pectoral girdle plus pectoral limb or fin https://orcid.org/0000-0002-6601-2165 upper limb and shoulder https://orcid.org/0000-0002-6601-2165 The subdivision of the skeleton of either the pectoral or pelvic girdle. AAO:0010686 VSAO:0000302 skeleton of girdle uberon UBERON:0010719 girdle skeleton UBERON:0010719 The subdivision of the skeleton of either the pectoral or pelvic girdle. https://orcid.org/0000-0002-6601-2165 A bone that is part of an appendage girdle complex (i.e. any bone in a limb, fin or girdle). EMAPA:35494 MA:0000688 uberon bone of extended limb/fin region limb bone UBERON:0010740 bone of appendage girdle complex UBERON:0010740 A bone that is part of an appendage girdle complex (i.e. any bone in a limb, fin or girdle). UBERONREF:0000003 https://orcid.org/0000-0002-6601-2165 bone of extended limb/fin region UBERONREF:0000003 https://orcid.org/0000-0002-6601-2165 limb bone MA:0000688 UBERONREF:0000003 A bone that is part of a pectoral complex. Examples: scapula, manus phalanx, any carpal bone, any bone of the pectoral fin. EMAPA:35933 MA:0000612 uberon bone of forelimb or pectoral fin or pectoral girdle forelimb bone UBERON:0010741 bone of pectoral complex UBERON:0010741 A bone that is part of a pectoral complex. Examples: scapula, manus phalanx, any carpal bone, any bone of the pectoral fin. UBERONREF:0000003 https://orcid.org/0000-0002-6601-2165 bone of forelimb or pectoral fin or pectoral girdle UBERONREF:0000003 https://orcid.org/0000-0002-6601-2165 forelimb bone MA:0000612 UBERONREF:0000003 The collection of all meningeal layers that line a central nervous system. EHDAA2:0004661 FMA:231572 NCIT:C12349 SCTID:362879001 UMLS:C0228116 Wikipedia:Meninges neuronames:1465 cerebral meninges cluster of meninges meninges uberon UBERON:0010743 meningeal cluster UBERON:0010743 The collection of all meningeal layers that line a central nervous system. https://orcid.org/0000-0002-6601-2165 cluster of meninges FMA:231572 meninges FMA:231572 A muscle of a pectoral girdle, pectoral fin or anterior limb. AAO:0010687 EMAPA:32624 FMA:9621 MA:0000615 pectoral girdle and fore limb muscles uberon muscle of pectoral girdle and limb UBERON:0010891 pectoral complex muscle UBERON:0010891 A muscle of a pectoral girdle, pectoral fin or anterior limb. https://orcid.org/0000-0002-6601-2165 pectoral girdle and fore limb muscles AAO:0010687 Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints. FMA:23879 SCTID:129140006 VSAO:0000042 skeletal subdivision uberon subdivision of skeleton (in vivo) UBERON:0010912 subdivision of skeleton UBERON:0010912 Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints. UBERONREF:0000003 https://orcid.org/0000-0002-6601-2165 skeletal subdivision VSAO:0000042 subdivision of skeleton (in vivo) FMA:23879 Any muscle organ that is part of either the head or the neck. NCIT:C32716 muscle of head or neck uberon muscle of head and neck UBERON:0010959 craniocervical muscle UBERON:0010959 Any muscle organ that is part of either the head or the neck. http://orcid.org/0000-0002-6601-2165 A cartilage element that is part of a splanchnocranium. EFO:0003689 TAO:0001460 ZFA:0001460 splanchnocranium cartilage uberon UBERON:0011004 pharyngeal arch cartilage UBERON:0011004 A cartilage element that is part of a splanchnocranium. OBOL:automatic splanchnocranium cartilage ZFA:0001460 A synovial joint that is part of a pectoral girdle region. FMA:35243 SCTID:303080001 joint of shoulder girdle pectoral girdle joint uberon UBERON:0011108 synovial joint of pectoral girdle UBERON:0011108 A synovial joint that is part of a pectoral girdle region. OBOL:automatic pectoral girdle joint FMA:35243 A skeletal joint that connects a laryngeal cartilage. FMA:55100 joint of larynx laryngeal articulation uberon UBERON:0011120 laryngeal joint UBERON:0011120 A skeletal joint that connects a laryngeal cartilage. OBOL:automatic joint of larynx FMA:55100 laryngeal articulation FMA:55100 Joint in which the articulating bones or cartilages are connected by ligaments or fibrocartilage without an intervening synovial cavity. Examples: sagittal suture, inferior tibiofibular syndesmosis, costochondral joint, pubic symphysis. FMA:7491 solid joint uberon UBERON:0011134 nonsynovial joint UBERON:0011134 Joint in which the articulating bones or cartilages are connected by ligaments or fibrocartilage without an intervening synovial cavity. Examples: sagittal suture, inferior tibiofibular syndesmosis, costochondral joint, pubic symphysis. FMA:7491 solid joint FMA:7491 Subdivision of the skeletal system which consists of the axial skeleton plus associated joints. FMA:7483 uberon UBERON:0011137 axial skeletal system UBERON:0011137 Subdivision of the skeletal system which consists of the axial skeleton plus associated joints. https://orcid.org/0000-0002-6601-2165 Subdivision of the skeletal system which consists of the postcranial axial skeleton plus associated joints. axial skeletal system FMA:302077 post-cranial axial skeletal system uberon UBERON:0011138 postcranial axial skeletal system UBERON:0011138 Subdivision of the skeletal system which consists of the postcranial axial skeleton plus associated joints. https://github.com/obophenotype/uberon/issues/44 https://orcid.org/0000-0002-6601-2165 axial skeletal system https://github.com/obophenotype/uberon/wiki/The-axial-skeleton Subdivision of skull that consists of the facial bones. EHDAA2:0002206 EHDAA:8361 EMAPA:18022 FMA:53673 MA:0000318 Wikipedia:Facial_skeleton facial skeleton uberon facial bone UBERON:0011156 facial skeleton UBERON:0011156 Subdivision of skull that consists of the facial bones. MP:0005274 Wikipedia:Facial_skeleton http://www.bartleby.com/107/37.html https://orcid.org/0000-0002-6601-2165 facial skeleton FMA:53673 facial bone MA:0000318 The skull can be divided into two: the neurocranium and the facial skeleton. FMA:54964 skull subdivision subdivision of skull uberon UBERON:0011158 primary subdivision of skull UBERON:0011158 The skull can be divided into two: the neurocranium and the facial skeleton. http://orcid.org/0000-0002-6601-2165 skull subdivision FMA:54964 subdivision of skull FMA:54964 uberon UBERON:0011159 primary subdivision of cranial skeletal system UBERON:0011159 A bone that is part of a neurocranium [Automatically generated definition]. EMAPA:35238 MA:0001478 SCTID:120229002 chondrocranium bone uberon UBERON:0011164 neurocranium bone UBERON:0011164 A bone that is part of a neurocranium [Automatically generated definition]. OBOL:automatic chondrocranium bone MA:0001478 A multi cell part structure that is part of a central nervous system. FMA:83143 cell part cluster of neuraxis neuraxis layer uberon UBERON:0011215 central nervous system cell part cluster UBERON:0011215 A multi cell part structure that is part of a central nervous system. OBOL:automatic cell part cluster of neuraxis FMA:83143 neuraxis layer FMA:83143 A subdivision of an anatomical system. FMA:67509 SCTID:91690000 uberon UBERON:0011216 organ system subdivision UBERON:0011216 A subdivision of an anatomical system. http://orcid.org/0000-0002-6601-2165 AAO:0010038 EMAPA:18808 FMA:49150 intrinsic muscle of eyeball intrinsic ocular muscle uberon UBERON:0011222 intra-ocular muscle UBERON:0011222 intrinsic ocular muscle EMAPA:18808 Synovial sac which surrounds parts of one or more tendons. Examples: synovial tendon sheath of manual digit 2, radial bursa. synovium BTO:0001823 FMA:40878 Wikipedia:Synovial_sheath uberon UBERON:0011233 Alternate def: A synovial sheath is a layer of a tendon sheath containing tendons in the hand and foot. They lie internal to the fibrous tendon sheaths. An example is the common synovial sheath for the flexor tendons. [Wikipedia:Synovial_sheath] synovial membrane of synovial tendon sheath UBERON:0011233 Synovial sac which surrounds parts of one or more tendons. Examples: synovial tendon sheath of manual digit 2, radial bursa. FMA:45087 Wikipedia:Synovial_sheath synovium BTO:0001823 FMA:40877 uberon UBERON:0011234 fibrous membrane of synovial tendon sheath UBERON:0011234 Subdivision of the skeletal system which consists of the appendicular skeleton plus associated joints. FMA:7484 VSAO:0000306 uberon UBERON:0011249 appendicular skeletal system UBERON:0011249 Subdivision of the skeletal system which consists of the appendicular skeleton plus associated joints. https://orcid.org/0000-0002-6601-2165 The part of the trunk that is in the dorsum[cjm]. EMAPA:35162 FMA:25056 MA:0000020 Wikipedia:Human_back back of trunk dorsal part of trunk dorsum of trunk trunk back uberon UBERON:0011270 dorsal trunk UBERON:0011270 The part of the trunk that is in the dorsum[cjm]. UBERONREF:0000006 Wikipedia:Human_back back of trunk FMA:25056 dorsum of trunk FMA:25056 trunk back FMA:25056 EHDAA2:0001845 uberon basal cell layer of skin outer epithelium of body UBERON:0011272 embryonic skin basal layer UBERON:0011272 outer epithelium of body Wikipathways:WP2062 A partion of white matter that is part of a telencephalon. This can be further subdivided in some species, for example, into hemisphere white matter and the corpus callosum. UBERON:0013202 UBERON:0022550 BIRNLEX:1075 FMA:83930 HBA:9219 HBA:9230 TAO:0000597 ZFA:0000597 predominantly white regional part of telencephalon telencephalic tract/commissure telencephalic white matter telencephalic tracts uberon UBERON:0011299 white matter of telencephalon UBERON:0011299 A partion of white matter that is part of a telencephalon. This can be further subdivided in some species, for example, into hemisphere white matter and the corpus callosum. https://orcid.org/0000-0002-6601-2165 predominantly white regional part of telencephalon BIRNLEX:1075 telencephalic tract/commissure ZFA:0000597 telencephalic white matter HBA:TELWM telencephalic tracts TAO:0000597 A portion of gray matter that is part of a telencephalon. UBERON:0024186 BIRNLEX:1067 FMA:83911 predominantly gray regional part of telencephalon uberon UBERON:0011300 gray matter of telencephalon UBERON:0011300 A portion of gray matter that is part of a telencephalon. OBOL:automatic predominantly gray regional part of telencephalon BIRNLEX:1067 EMAPA:17884 uberon UBERON:0011332 extrinsic tongue pre-muscle mass UBERON:0011332 A blood vasculature that is part of a head. TAO:0005297 ZFA:0005297 cranial blood vessel set of blood vessels of head uberon UBERON:0011362 cranial blood vasculature UBERON:0011362 A blood vasculature that is part of a head. OBOL:automatic cranial blood vessel ZFA:0005297 FMA:54364 SCTID:432899004 cavity of digestive tract cavity of gastrointestinal tract gastrointestinal tract lumen lumen of gastrointestinal tract uberon UBERON:0011565 lumen of gastrointestinal system UBERON:0011565 gastrointestinal tract lumen FMA:54364 lumen of gastrointestinal tract FMA:54364 An anatomical cavity that is part of a esophagus. EMAPA:18380 FMA:9398 SCTID:322648002 cavity of eosophagus cavity of esophagus eosophageal cavity eosophageal lumen eosophagus lumen esophageal cavity esophageal lumen esophagus lumen uberon UBERON:0011566 lumen of esophagus UBERON:0011566 An anatomical cavity that is part of a esophagus. OBOL:automatic cavity of esophagus FMA:9398 esophageal cavity FMA:9398 esophageal lumen FMA:9398 esophagus lumen FMA:9398 The collection of all skeletal elements in an individual limb or fin. VSAO:0000301 limb/fin skeleton skeletal parts of limb/fin skeleton of limb/fin uberon UBERON:0011582 paired limb/fin skeleton UBERON:0011582 The collection of all skeletal elements in an individual limb or fin. https://orcid.org/0000-0002-6601-2165 limb/fin skeleton VSAO:0000301 Anatomical structure that is an aggregation of similar cells from which cartilages and bones form, and from which chondrogenesis and osteogenesis are initiated during repair and/or regeneration. (Hall and Miyake 1995). VSAO:0000006 XAO:0004021 uberon UBERON:0011585 cell condensation UBERON:0011585 Anatomical structure that is an aggregation of similar cells from which cartilages and bones form, and from which chondrogenesis and osteogenesis are initiated during repair and/or regeneration. (Hall and Miyake 1995). GO_REF:0000034 PSPUB:0000170 VSAO:0000006 http://dx.plos.org/10.1371/journal.pone.0051070 A subdivision of the head that corresponds to the jaw skeleton, containing both soft tissue, skeleton and teeth (when present). The jaw region is divided into upper and lower regions. EMAPA:32905 NCIT:C114916 uberon UBERON:0011595 jaw region UBERON:0011595 A subdivision of the head that corresponds to the jaw skeleton, containing both soft tissue, skeleton and teeth (when present). The jaw region is divided into upper and lower regions. http://orcid.org/0000-0002-6601-2165 EHDAA2:0001020 lower jaw future lip uberon UBERON:0011596 future lower lip UBERON:0011596 lower jaw future lip EHDAA2:0001020 An epithelium that develops_from a ectoderm and is part of a oral epithelium. EHDAA2:0004137 uberon UBERON:0011642 oral epithelium from ectoderm UBERON:0011642 An epithelium that develops_from a ectoderm and is part of a oral epithelium. OBOL:automatic AAO:0000247 EFO:0003511 TAO:0000236 XAO:0003269 ZFA:0000236 mandibular muscle uberon UBERON:0011648 jaw muscle UBERON:0011648 mandibular muscle TAO:0000236 A major subdivision of an organism that divides an organism along its main body axis (typically anterio-posterior axis). In vertebrates, this is based on the vertebral column. axial subdivision of organism uberon body segment main body segment UBERON:0011676 subdivision of organism along main body axis UBERON:0011676 A major subdivision of an organism that divides an organism along its main body axis (typically anterio-posterior axis). In vertebrates, this is based on the vertebral column. https://orcid.org/0000-0002-6601-2165 A cardiovascular system that is part of a conceptus. EHDAA2:0000216 FMA:305965 NCIT:C34148 conceptus cardiovascular system uberon embryonic circulatory system fetal circulatory system UBERON:0011695 embryonic cardiovascular system UBERON:0011695 A cardiovascular system that is part of a conceptus. OBOL:automatic EMAPA:25350 FMA:14469 MA:0001107 SCTID:280300006 left recurrent laryngeal branch left recurrent laryngeal nerve vagus X nerve left recurrent laryngeal branch uberon UBERON:0011766 left recurrent laryngeal nerve UBERON:0011766 left recurrent laryngeal branch EMAPA:25350 left recurrent laryngeal nerve FMA:14469 vagus X nerve left recurrent laryngeal branch MA:0001107 EMAPA:17275 FMA:14468 MA:0001108 SCTID:280299003 right recurrent laryngeal branch right recurrent laryngeal nerve vagus X nerve right recurrent laryngeal branch uberon UBERON:0011767 right recurrent laryngeal nerve UBERON:0011767 right recurrent laryngeal branch EMAPA:17275 right recurrent laryngeal nerve FMA:14468 vagus X nerve right recurrent laryngeal branch MA:0001108 An anatomical space that is part of a bone of lower jaw. AAO:0000273 uberon UBERON:0011772 lower jaw opening UBERON:0011772 An anatomical space that is part of a bone of lower jaw. OBOL:automatic A cranial nerve nucleus that is associated with a vagus nerve. FMA:54573 SCTID:362467005 nucleus of Xth nerve nucleus of vagal X nerve nucleus of vagal nerve nucleus of vagus nerve tenth cranial nerve nucleus vagal X nucleus vagal nucleus vagus nucleus uberon nodosal nucleus UBERON:0011775 vagus nerve nucleus UBERON:0011775 A cranial nerve nucleus that is associated with a vagus nerve. OBOL:automatic nucleus of vagus nerve FMA:54573 tenth cranial nerve nucleus FMA:54573 vagal X nucleus http://orcid.org/0000-0002-6601-2165 vagal nucleus http://orcid.org/0000-0002-6601-2165 vagus nucleus http://orcid.org/0000-0002-6601-2165 nodosal nucleus http://orcid.org/0000-0002-6601-2165 A neural nucleus that is part of the spinal cord. FMA:77011 spinal cord nucleus uberon UBERON:0011777 nucleus of spinal cord UBERON:0011777 A neural nucleus that is part of the spinal cord. http://orcid.org/0000-0002-6601-2165 spinal cord nucleus FMA:77011 A nerve that is part of a head. uberon cephalic nerve head nerve UBERON:0011779 nerve of head region UBERON:0011779 A nerve that is part of a head. OBOL:automatic Ectodermal placode that does not develop into a component of the nervous system. uberon UBERON:0011814 non-neurogenic ectodermal placode UBERON:0011814 Ectodermal placode that does not develop into a component of the nervous system. PMID:11523831 http://orcid.org/0000-0002-6601-2165 An anatomical junction that divides and overlaps with and atrium and a ventricle in the heart. EHDAA2:0004149 FMA:85125 uberon AV region AV segment atrial ventricular junction atrioventricular junction atrioventricular segment UBERON:0011820 atrioventricular region UBERON:0011820 An anatomical junction that divides and overlaps with and atrium and a ventricle in the heart. http://orcid.org/0000-0002-6601-2165 AV region PMID:21234997 AV segment PMID:21234997 atrial ventricular junction GO:0003294 atrioventricular junction FMA:85125 GO:0003294 atrioventricular segment PMID:21234997 Connective tissue, which consists of a population of connective tissue cells, the intercellular matrix of which contains an irregular network of collagen and elastic fiber bundles. Examples: areolar tissue, mucoid tissue, connective tissue of peritoneum, connective tissue of fibrous pericardium. FMA:20107 uberon UBERON:0011821 irregular connective tissue UBERON:0011821 Connective tissue, which consists of a population of connective tissue cells, the intercellular matrix of which contains an irregular network of collagen and elastic fiber bundles. Examples: areolar tissue, mucoid tissue, connective tissue of peritoneum, connective tissue of fibrous pericardium. FMA:20107 Irregular connective tissue is an irregular connective tissue, the intercellular matrix of which contains a dense irregular network of collagen and elastic fiber bundles. Examples: connective tissue of peritoneum, connective tissue of fibrous pericardium. FMA:20109 NCIT:C32882 Wikipedia:Dense_irregular_connective_tissue irregular dense connective tissue typus irregularis (textus connectivus collagenosus compactus) uberon UBERON:0011822 dense irregular connective tissue UBERON:0011822 Irregular connective tissue is an irregular connective tissue, the intercellular matrix of which contains a dense irregular network of collagen and elastic fiber bundles. Examples: connective tissue of peritoneum, connective tissue of fibrous pericardium. FMA:20109 Wikipedia:Dense_irregular_connective_tissue typus irregularis (textus connectivus collagenosus compactus) FMA:20109 Dense connective tissue is mainly composed of collagen type I. Crowded between the collagen fibers are rows of fibroblasts, fiber-forming cells, that manufacture the fibers. Dense connective tissue forms strong, rope-like structures such as tendons and ligaments. Tendons attach skeletal muscles to bones; ligaments connect bones to bones at joints. Ligaments are more stretchy and contain more elastic fibers than tendons. Dense connective tissue also make up the lower layers of the skin (dermis), where it is arranged in sheets. AAO:0000121 NCIT:C32450 Wikipedia:Dense_connective_tissue uberon UBERON:0011823 dense connective tissue UBERON:0011823 Dense connective tissue is mainly composed of collagen type I. Crowded between the collagen fibers are rows of fibroblasts, fiber-forming cells, that manufacture the fibers. Dense connective tissue forms strong, rope-like structures such as tendons and ligaments. Tendons attach skeletal muscles to bones; ligaments connect bones to bones at joints. Ligaments are more stretchy and contain more elastic fibers than tendons. Dense connective tissue also make up the lower layers of the skin (dermis), where it is arranged in sheets. Wikipedia:Dense_connective_tissue FMA:75634 SCTID:363130003 uberon UBERON:0011824 fibrous connective tissue UBERON:0011824 Irregular connective tissue, the intercellular matrix of which contains a sparse irregular network of collagen and elastic fiber bundles. Examples: areolar tissue, neuroglial tissue, mucoid tissue. FMA:19783 NCIT:C33007 Wikipedia:Loose_connective_tissue uberon UBERON:0011825 loose connective tissue UBERON:0011825 Irregular connective tissue, the intercellular matrix of which contains a sparse irregular network of collagen and elastic fiber bundles. Examples: areolar tissue, neuroglial tissue, mucoid tissue. FMA:19783 An acinus that is part of a exocrine gland. exocrine gland acinus uberon UBERON:0011858 acinus of exocrine gland UBERON:0011858 An acinus that is part of a exocrine gland. OBOL:automatic FMA:63212 MESH:D024022 NCIT:C32339 NIF_Subcellular:sao7547390221 uberon UBERON:0011860 collection of collagen fibrils UBERON:0011860 The connective tissue bundles in the extracellular matrix of aorta tissue that are composed of collagen, and play a role in tissue strength and elasticity. uberon UBERON:0011861 aorta collagen fibril UBERON:0011861 The connective tissue bundles in the extracellular matrix of aorta tissue that are composed of collagen, and play a role in tissue strength and elasticity. MP:0011640 The connective tissue bundles in the extracellular matrix of pulmonary tissue that are composed of collagen, and play a role in tissue strength and elasticity. uberon UBERON:0011862 pulmonary collagen fibril UBERON:0011862 The connective tissue bundles in the extracellular matrix of pulmonary tissue that are composed of collagen, and play a role in tissue strength and elasticity. MP:0011641 The connective tissue bundles in the extracellular matrix of bone tissue that are composed of collagen, and play a role in tissue strength and elasticity. uberon UBERON:0011863 bone collagen fibril UBERON:0011863 The connective tissue bundles in the extracellular matrix of bone tissue that are composed of collagen, and play a role in tissue strength and elasticity. MP:0011642 The connective tissue bundles in the extracellular matrix of tendon tissue that are composed of collagen, and play a role in tissue strength and elasticity. uberon UBERON:0011864 tendon collagen fibril UBERON:0011864 The connective tissue bundles in the extracellular matrix of tendon tissue that are composed of collagen, and play a role in tissue strength and elasticity. MP:0011643 The connective tissue bundles in the extracellular matrix of corneal stroma that are composed of collagen, and play a role in tissue strength and elasticity. uberon UBERON:0011865 corneal stroma collagen fibril UBERON:0011865 The connective tissue bundles in the extracellular matrix of corneal stroma that are composed of collagen, and play a role in tissue strength and elasticity. MP:0011650 Front (ventral) portion of the vascular, pigmentary, or middle coat of the eye, including the ciliary body and the iris. SCTID:280656002 Haller tunica vascula anterior part of uveal tract anterior uveal tract anterior vascular layer of the eyeball anterior vascular tunic of the eye tunica vasculosa bulbosa ventral uveal tract uberon ciliary body and iris vasculosa oculi UBERON:0011892 anterior uvea UBERON:0011892 Front (ventral) portion of the vascular, pigmentary, or middle coat of the eye, including the ciliary body and the iris. MP:0005194 Haller tunica vascula MP:0005194 tunica vasculosa bulbosa MP:0005194 vasculosa oculi MP:0005194 Epimysium is a layer of connective tissue which ensheaths the entire muscle. It is composed of dense irregular connective tissue. It is continuous with fascia and other connective tissue wrappings of muscle including the endomysium, and perimysium. It is also continuous with tendons where it becomes thicker and collagenous. FMA:9726 NCIT:C32527 Wikipedia:Epimysium fascia of muscle organ uberon UBERON:0011899 epimysium UBERON:0011899 Epimysium is a layer of connective tissue which ensheaths the entire muscle. It is composed of dense irregular connective tissue. It is continuous with fascia and other connective tissue wrappings of muscle including the endomysium, and perimysium. It is also continuous with tendons where it becomes thicker and collagenous. Wikipedia:Epimysium fascia of muscle organ FMA:9726 Masses of developing blood cells attached to endothelium in the yolk sac. EHDAA2:0000177 EMAPA:16115 visceral yolk sac blood island yolk sac blood islands uberon UBERON:0011919 yolk sac blood island UBERON:0011919 Masses of developing blood cells attached to endothelium in the yolk sac. MP:0011204 visceral yolk sac blood island MP:0011204 yolk sac blood islands EHDAA2:0000177 Nerve fibers which project from the central nervous system to autonomic ganglia. In the sympathetic division most preganglionic fibers originate with neurons in the intermediolateral column of the spinal cord, exit via ventral roots from upper thoracic through lower lumbar segments, and project to the paravertebral ganglia; there they either terminate in synapses or continue through the splanchnic nerves to the prevertebral ganglia. In the parasympathetic division the fibers originate in neurons of the brain stem and sacral spinal cord. In both divisions the principal transmitter is acetylcholine but peptide cotransmitters may also be released. FMA:5923 MESH:D001339 NCIT:C12624 Wikipedia:Preganglionic_nerve_fibers preganglionic nerve fiber uberon preganglionic autonomic fibre UBERON:0011925 preganglionic autonomic fiber UBERON:0011925 Nerve fibers which project from the central nervous system to autonomic ganglia. In the sympathetic division most preganglionic fibers originate with neurons in the intermediolateral column of the spinal cord, exit via ventral roots from upper thoracic through lower lumbar segments, and project to the paravertebral ganglia; there they either terminate in synapses or continue through the splanchnic nerves to the prevertebral ganglia. In the parasympathetic division the fibers originate in neurons of the brain stem and sacral spinal cord. In both divisions the principal transmitter is acetylcholine but peptide cotransmitters may also be released. MESH:A08.663.542.122 Wikipedia:Preganglionic_nerve_fibers preganglionic nerve fiber FMA:5923 A cholinergic axonal fiber projecting from the CNS to a sympathetic ganglion. SCTID:323517007 uberon sympathetic preganglionic fiber UBERON:0011927 preganglionic sympathetic fiber UBERON:0011927 A cholinergic axonal fiber projecting from the CNS to a sympathetic ganglion. MP:0008310 sympathetic preganglionic fiber MP:0008310 A cholinergic axonal fibers projecting from the CNS to a parasympathetic ganglion. Wikipedia:Preganglionic_fibers uberon parasympathetic preganglionic fiber UBERON:0011930 preganglionic parasympathetic fiber UBERON:0011930 A cholinergic axonal fibers projecting from the CNS to a parasympathetic ganglion. MP:0008311 parasympathetic preganglionic fiber MP:0008311 A region of the stomach that is lined with glandular epithelium. EMAPA:17623 MA:0001613 NCIT:C77661 SCTID:27633001 uberon glandular stomach UBERON:0011953 stomach glandular region UBERON:0011953 A region of the stomach that is lined with glandular epithelium. http://orcid.org/0000-0002-6601-2165 The aggregate of the coelemic cavity lumen plus the membranes that line the lumen. EHDAA2:0004731 Wikipedia:Coelom ZFA:0001438 enterocoelom haemocoelom schizocoelom uberon coelem coelomic cavity UBERON:0011997 coelom UBERON:0011997 The aggregate of the coelemic cavity lumen plus the membranes that line the lumen. UBERON:cjm Wikipedia:Body_cavity Wikipedia:Coelom enterocoelom NCBITaxon:33511 coelomic cavity EHDAA2:0004731 The cavity within a myotome. EMAPA:31134 VHOG:0001283 uberon UBERON:0012054 myocoele UBERON:0012054 The cavity within a myotome. http://medical-dictionary.thefreedictionary.com/myocoele Bone that forms as a replacement of another structural tissue. AAO:0010768 TAO:0001637 ZFA:0001628 uberon UBERON:0012075 replacement bone UBERON:0012075 Bone that forms as a replacement of another structural tissue. ZFA:0001628 An anatomical cavity that is part of a bronchus. FMA:62646 SCTID:199401001 bronchial lumen lumen of bronchus uberon UBERON:0012082 bronchial lumen UBERON:0012082 An anatomical cavity that is part of a bronchus. OBOL:automatic bronchial lumen FMA:62646 lumen of bronchus FMA:62646 A primordium that has the potential to develop into a stomach. EFO:0002580 NCIT:C34305 uberon stomach endoderm UBERON:0012172 stomach primordium UBERON:0012172 A primordium that has the potential to develop into a stomach. OBOL:automatic stomach endoderm EFO:0002580 A zone of skin that is part of a craniocervical region. MA:0000574 NCIT:C12294 uberon UBERON:0012180 head or neck skin UBERON:0012180 A zone of skin that is part of a craniocervical region. OBOL:automatic The veins that run parallel to the phrenic arteries which include the two superior and two inferior phrenic veins. MA:0002194 NCIT:C53062 uberon UBERON:0012193 phrenic vein UBERON:0012193 The veins that run parallel to the phrenic arteries which include the two superior and two inferior phrenic veins. ncithesaurus:Phrenic_Vein An artery that originates from the abdominal aorta. SCTID:281470000 abdominal artery artery of abdomen uberon UBERON:0012254 abdominal aorta artery UBERON:0012254 An artery that originates from the abdominal aorta. Wikipedia:Abdominal_aorta#Branches https://orcid.org/0000-0002-6601-2165 An epithelium that consists of columnar epithelial cells. Columnar epithelia are epithelial cells whose heights are at least four times their width. Columnar epithelia are divided into simple (or unilayered), and the rarer stratified (or multi-layered).[WP, modified]. Wikipedia:Columnar_epithelium uberon UBERON:0012274 columnar epithelium UBERON:0012274 An epithelium that consists of columnar epithelial cells. Columnar epithelia are epithelial cells whose heights are at least four times their width. Columnar epithelia are divided into simple (or unilayered), and the rarer stratified (or multi-layered).[WP, modified]. Wikipedia:Columnar_epithelium Epithelium that derives from the mesoderm. [Automatically generated definition]. FMA:86452 mesoderm-derived epithelium mesoepithelium uberon UBERON:0012275 meso-epithelium UBERON:0012275 Epithelium that derives from the mesoderm. [Automatically generated definition]. OBOL:automatic One of five swellings formed during the development of the face. FMA:293103 SCTID:89066004 uberon embryonic facial process facial primordium primordium of face UBERON:0012314 embryonic facial prominence UBERON:0012314 One of five swellings formed during the development of the face. http://www.indiana.edu/~anat550/hnanim/face/face.html An artery of the neck. NCIT:C52850 uberon UBERON:0012320 cervical artery UBERON:0012320 An artery of the neck. https://orcid.org/0000-0002-6601-2165 The deep cervical artery (Profunda cervicalis) is an artery of the neck. FMA:10659 SCTID:244223002 Wikipedia:Deep_cervical_artery uberon profunda cervicalis UBERON:0012321 deep cervical artery UBERON:0012321 The deep cervical artery (Profunda cervicalis) is an artery of the neck. Wikipedia:Deep_cervical_artery profunda cervicalis Wikipedia:Deep_cervical_artery The transverse cervical artery (transverse artery of neck, transversa colli artery) is a branch of the thyrocervical trunk, running at a higher level than the suprascapular artery. FMA:10664 MA:0001936 SCTID:244224008 Wikipedia:Transverse_cervical_artery uberon cervical artery cervical transverse artery descending branch of the transverse cervical transversalis artery colli transversalis colli artery transverse cervical transverse cervical vessels UBERON:0012324 transverse cervical artery UBERON:0012324 The transverse cervical artery (transverse artery of neck, transversa colli artery) is a branch of the thyrocervical trunk, running at a higher level than the suprascapular artery. Wikipedia:Transverse_cervical_artery cervical artery MA:0001936 Wikipedia:Transverse_cervical_artery cervical transverse artery Wikipedia:Transverse_cervical_artery descending branch of the transverse cervical Wikipedia:Transverse_cervical_artery transversalis artery colli Wikipedia:Transverse_cervical_artery transversalis colli artery Wikipedia:Transverse_cervical_artery transverse cervical Wikipedia:Transverse_cervical_artery transverse cervical vessels Wikipedia:Transverse_cervical_artery A bone element that is part of a jaw region. EMAPA:35453 MA:0003130 SCTID:369003004 jaw bone uberon UBERON:0012360 bone of jaw UBERON:0012360 A bone element that is part of a jaw region. OBOL:automatic A layer of tissue between the muscularis and serosa. FMA:45636 NCIT:C94494 SCTID:2255006 Wikipedia:Subserosa uberon UBERON:0012375 Contains nerves, blood vessels, lymphatics and lymph nodes subserosa UBERON:0012375 A layer of tissue between the muscularis and serosa. Wikipedia:Subserosa MA:0001802 uberon UBERON:0012416 respiratory system arterial smooth muscle UBERON:0012416 A smooth muscle tissue that is part of a respiratory system venous blood vessel. MA:0001812 uberon UBERON:0012418 respiratory system venous smooth muscle UBERON:0012418 A smooth muscle tissue that is part of a respiratory system venous blood vessel. OBOL:automatic Blood-forming tissue, consisting of reticular fibers and cells. CALOHA:TS-2142 FMA:14073 NCIT:C13051 haemopoietic tissue hematopoietic tissue hemopoietic tissue textus haemopoieticus bone marrow tissue uberon UBERON:0012429 hematopoietic tissue UBERON:0012429 Blood-forming tissue, consisting of reticular fibers and cells. http://encyclopedia2.thefreedictionary.com/hematopoietic+tissue haemopoietic tissue FMA:14073 hematopoietic tissue FMA:14073 hemopoietic tissue FMA:14073 textus haemopoieticus FMA:14073 bone marrow tissue NCBITaxon:9606 The sclera and cornea form the fibrous tunic of the bulb of the eye; the sclera is opaque, and constitutes the posterior five-sixths of the tunic; the cornea is transparent, and forms the anterior sixth. tunica fibrosa FMA:58102 SCTID:361318005 Wikipedia:Fibrous_tunic_of_eyeball fibrous layer of eyeball uberon corneosclera fibrous tunic UBERON:0012430 tunica fibrosa of eyeball UBERON:0012430 The sclera and cornea form the fibrous tunic of the bulb of the eye; the sclera is opaque, and constitutes the posterior five-sixths of the tunic; the cornea is transparent, and forms the anterior sixth. Wikipedia:Fibrous_tunic_of_eyeball fibrous layer of eyeball FMA:58102 corneosclera Wikipedia:Fibrous_tunic_of_eyeball fibrous tunic Wikipedia:Fibrous_tunic_of_eyeball EHDAA2:0000472 EMAPA:16054 VHOG:0000767 uberon UBERON:0012466 extraembryonic cavity UBERON:0012466 An anatomical space with no opening to another space or to the exterior. AEO:0000222 closed anatomical space uberon UBERON:0012467 enclosed anatomical space UBERON:0012467 An anatomical space with no opening to another space or to the exterior. AEO:0000222 The collection of all skeletal elements in a pectoral complex - i.e. the combination of free limb or fin plus pectoral girdle. FMA:24139 uberon bones of upper limb ossa membri superioris pectoral complex skeleton set of bones of upper limb skeleton of anterior limb/fin and girdle upper limb skeleton UBERON:0012475 skeleton of pectoral complex UBERON:0012475 The collection of all skeletal elements in a pectoral complex - i.e. the combination of free limb or fin plus pectoral girdle. https://orcid.org/0000-0002-6601-2165 bones of upper limb FMA:24139 ossa membri superioris FMA:TA pectoral complex skeleton https://orcid.org/0000-0002-6601-2165 set of bones of upper limb FMA:24139 skeleton of anterior limb/fin and girdle https://orcid.org/0000-0002-6601-2165 upper limb skeleton FMA:24139 An adventitia that is part of a esophagus. FMA:63006 SCTID:85950006 adventitia of oesophagus adventitious layer of esophagus esophageal adventitia esophagus adventitia tunica adventitia (esophagus) tunica adventitia oesophageae uberon UBERON:0012504 adventitia of esophagus UBERON:0012504 An adventitia that is part of a esophagus. OBOL:automatic adventitia of oesophagus FMA:63006 adventitious layer of esophagus FMA:63006 esophageal adventitia FMA:63006 esophagus adventitia FMA:63006 tunica adventitia (esophagus) FMA:63006 tunica adventitia oesophageae FMA:TA A vein that is part of a abdomen. SCTID:281473003 abdominal vein uberon UBERON:0013126 vein of abdomen UBERON:0013126 A vein that is part of a abdomen. OBOL:automatic The part of the venous system that drains the lungs[Kardong]. Wikipedia:Pulmonary_venous_system pulmonary venous circulatory system uberon UBERON:0013127 pulmonary venous system UBERON:0013127 The part of the venous system that drains the lungs[Kardong]. ISBN:0073040584 Wikipedia:Pulmonary_venous_system A vein that drains a lip. SCTID:367664002 labial vein of face lip vein uberon labial vein UBERON:0013136 vein of lip UBERON:0013136 A vein that drains a lip. OBOL:automatic lip vein OBOL:automatic Any vein within the general circulation that transports blood back to the right atrium of the heart. FMA:66644 NCIT:C33719 SCTID:244389004 systemic venous tree organ part uberon UBERON:0013140 systemic vein UBERON:0013140 Any vein within the general circulation that transports blood back to the right atrium of the heart. ncithesaurus:Systemic_Vein systemic venous tree organ part FMA:66644 EHDAA2:0000033 EMAPA:16384 endoderm of mandibular component uberon UBERON:0013156 1st arch mandibular endoderm UBERON:0013156 endoderm of mandibular component EMAPA:16384 The secretory unit of a serous gland. The acinar portion is composed of serous secreting cells. FMA:86279 acinus of serous gland uberon UBERON:0013232 serous acinus UBERON:0013232 The secretory unit of a serous gland. The acinar portion is composed of serous secreting cells. http://orcid.org/0000-0002-6601-2165 http://www.siumed.edu/~dking2/intro/glands.htm Anatomical cavity that is the lumen of the skull and contains the brain. FMA:9644 MA:0003061 NCIT:C77638 SCTID:264452006 Wikipedia:Cranial_cavity neuronames:2806 uberon intracranial cavity intracranial space UBERON:0013411 cranial cavity UBERON:0013411 Anatomical cavity that is the lumen of the skull and contains the brain. UBERON:cjm intracranial cavity Wikipedia:Cranial_cavity intracranial space Wikipedia:Cranial_cavity A blood vessel endothelium that is part of a lung [Automatically generated definition]. BTO:0004128 CALOHA:TS-0573 uberon respiratory endothelium UBERON:0013479 lung endothelium UBERON:0013479 A blood vessel endothelium that is part of a lung [Automatically generated definition]. OBOL:automatic respiratory endothelium BTO:0004128 The space that surrounds an organism. external to organism outside of body uberon UBERON:0013514 space surrounding organism UBERON:0013514 The space that surrounds an organism. https://orcid.org/0000-0002-6601-2165 uberon UBERON:0013522 subdivision of tube UBERON:0013522 The anatomical space that is enclosed by a stomach. EMAPA:18395 FMA:14585 cavity of stomach uberon gastric cavity UBERON:0013525 stomach lumen UBERON:0013525 The anatomical space that is enclosed by a stomach. http://orcid.org/0000-0002-6601-2165 cavity of stomach FMA:14585 gastric cavity FMA:14585 Anatomical space that is an opening in a bone of the skull. FMA:53165 SCTID:276742007 Wikipedia:Foramina_of_the_skull foramen of skull cranial conduit cranial foramen uberon UBERON:0013685 foramen of skull UBERON:0013685 Anatomical space that is an opening in a bone of the skull. TAO:curator http://orcid.org/0000-0002-6601-2165 foramen of skull Wikipedia:Foramina_of_the_skull cranial conduit FMA:53165 2 An anatomical space which is the lumen of some anatomical conduit and connects two or more spaces together[FMA,modified]. FMA:9338 foramen space uberon UBERON:0013686 anatomical conduit space UBERON:0013686 An anatomical space which is the lumen of some anatomical conduit and connects two or more spaces together[FMA,modified]. FMA:9338 http://orcid.org/0000-0002-6601-2165 Vascular endothelium found in blood vessels of the blood-brain-barrier. BTO:0001852 BTO:0003248 CALOHA:TS-0092 uberon cerebromicrovascular endothelium UBERON:0013694 brain endothelium UBERON:0013694 Vascular endothelium found in blood vessels of the blood-brain-barrier. CALOHA:TS-0092 cerebromicrovascular endothelium CALOHA:TS-0092 Musculature of the head and neck, spine, and ribs. EHDAA2:0000159 EMAPA:18166 uberon UBERON:0013700 axial musculature UBERON:0013700 Musculature of the head and neck, spine, and ribs. HP:0003327 A principle subdivision of an organism that includes all structures along the primary axis, typically the anterior-posterior axis, from head to tail, including structures of the body proper where present (for example, ribs), but excluding appendages. uberon UBERON:0013701 main body axis UBERON:0013701 A principle subdivision of an organism that includes all structures along the primary axis, typically the anterior-posterior axis, from head to tail, including structures of the body proper where present (for example, ribs), but excluding appendages. https://orcid.org/0000-0002-6601-2165 The region of the organism associated with the visceral organs. AEO:0000103 BTO:0001489 FMA:231424 uberon body whole body UBERON:0013702 body proper UBERON:0013702 The region of the organism associated with the visceral organs. AEO:0000103 body AEO:0000103 whole body BTO:0001489 A tubular passage that extends from the primitive pit into the head process during the early stages of embryonic development in mammals. It perforates the splanchnopleure layer so that the yolk sac and the amnion are connected temporarily. FMA:293127 NCIT:C34230 uberon chordal canal UBERON:0013704 notochordal canal UBERON:0013704 A tubular passage that extends from the primitive pit into the head process during the early stages of embryonic development in mammals. It perforates the splanchnopleure layer so that the yolk sac and the amnion are connected temporarily. http://medical-dictionary.thefreedictionary.com/notochordal+canal Fluid contained within the notochordal canal. notochord fluid portion of notochordal fluid uberon UBERON:0013727 Distinct feature of coelocanths notochordal fluid UBERON:0013727 Fluid contained within the notochordal canal. http://animaldiversity.org/accounts/Latimeria_chalumnae/ http://orcid.org/0000-0002-6601-2165 An organ component layer that is part of a integumental system. SCTID:314820002 layer of skin skin layer uberon UBERON:0013754 integumentary system layer UBERON:0013754 An organ component layer that is part of a integumental system. OBOL:automatic A blood that is part of a artery. FMA:83066 arterial blood blood in artery portion of arterial blood uberon UBERON:0013755 arterial blood UBERON:0013755 A blood that is part of a artery. OBOL:automatic arterial blood FMA:83066 blood in artery FMA:83066 portion of arterial blood FMA:83066 A blood that is part of a vein. FMA:83067 blood in vein portion of venous blood venous blood uberon UBERON:0013756 venous blood UBERON:0013756 A blood that is part of a vein. OBOL:automatic blood in vein FMA:83067 portion of venous blood FMA:83067 venous blood FMA:83067 A blood that is part of a capillary. FMA:263901 NCIT:C32212 blood in capillary portion of blood in capillary portion of capillary blood uberon UBERON:0013757 capillary blood UBERON:0013757 A blood that is part of a capillary. OBOL:automatic portion of blood in capillary FMA:263901 Any of the organs or elements that are part of the digestive system. Examples: tongue, esophagus, spleen, crop, lunge feeding organ, tooth elements. SCTID:272627002 digestive organ digestive system organ uberon UBERON:0013765 digestive system element UBERON:0013765 Any of the organs or elements that are part of the digestive system. Examples: tongue, esophagus, spleen, crop, lunge feeding organ, tooth elements. http://orcid.org/0000-0002-6601-2165 Great vessels is a term used to refer collectively to the large vessels that bring blood to and from the heart. great vessel EMAPA:36460 SCTID:304066000 Wikipedia:Great_vessels great vessel of thorax uberon UBERON:0013768 Groupings may vary - typically pulmonary vessels and aorta and vena cavae great vessel of heart UBERON:0013768 Great vessels is a term used to refer collectively to the large vessels that bring blood to and from the heart. Wikipedia:Great_vessels Embryonic structure that gives rise to the telencephalon. EHDAA2:0004424 EMAPA:36024 TAO:0000571 ZFA:0000571 presumptive telencephalon uberon UBERON:0014371 paired anteriolateral division of the embryonic prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived[MP] future telencephalon UBERON:0014371 Embryonic structure that gives rise to the telencephalon. ZFA:0000571 ZFA:curator presumptive telencephalon ZFA:0000571 Mesenchyme that develops_from the neural crest[Automatically generated definition]. EMAPA:32735 FMA:293883 mesenchyme from neural crest neural crest derived mesenchyme neural crest mesenchyme uberon UBERON:0014387 mesenchyme derived from neural crest UBERON:0014387 Mesenchyme that develops_from the neural crest[Automatically generated definition]. OBOL:automatic https://github.com/obophenotype/uberon/issues/248 A papilla that contain taste buds, including the fungiform, foliate, and circumvallate papillae. gustatory papilla taste papilla uberon UBERON:0014389 gustatory papilla of tongue UBERON:0014389 A papilla that contain taste buds, including the fungiform, foliate, and circumvallate papillae. MGI:smb MP:0006256 Muscle that is part of the respiratory system. uberon UBERON:0014398 respiratory muscle UBERON:0014398 Muscle that is part of the respiratory system. http://orcid.org/0000-0002-6601-2165 An anatomical space that is enclosed by a sinusoid. FMA:63133 lumen of sinusoid sinusoid lumen uberon UBERON:0014399 sinusoidal space UBERON:0014399 An anatomical space that is enclosed by a sinusoid. OBOL:automatic lumen of sinusoid FMA:63133 sinusoid lumen FMA:63133 A part of the body present only in a specific gender. AEO:0000174 WBbt:0005752 gender-specific gender-specific anatomical structure sex-specific uberon UBERON:0014402 sex-specific anatomical structure UBERON:0014402 A part of the body present only in a specific gender. AEO:0000174 AEO:JB gender-specific anatomical structure AEO:0000174 A part of the body present only in females. AEO:0000176 uberon UBERON:0014404 female anatomical structure UBERON:0014404 A part of the body present only in females. AEO:0000176 AEO:JB A taste bud that is located on the tongue, situated on a gustatory papilla. gustatory papilla taste bud gustatory papillae taste bud uberon UBERON:0014451 tongue taste bud UBERON:0014451 A taste bud that is located on the tongue, situated on a gustatory papilla. http://orcid.org/0000-0002-6601-2165 gustatory papillae taste bud MP:0006260 A gustatory epithelium that is part of a tongue. BIRNLEX:4099 lingual gustatory epithelium uberon UBERON:0014452 gustatory epithelium of tongue UBERON:0014452 A gustatory epithelium that is part of a tongue. OBOL:automatic lingual gustatory epithelium http://orcid.org/0000-0002-6601-2165 Subcutaneous adipose tissue that is located in the peritoneal cavity. BTO:0004041 CALOHA:TS-2405 uberon abdominal fat intra-abdominal adipose tissue intra-abdominal fat organ fat visceral adipose tissue visceral fat UBERON:0014454 visceral abdominal adipose tissue UBERON:0014454 Subcutaneous adipose tissue that is located in the peritoneal cavity. CALOHA:paula MGI:csmith http://orcid.org/0000-0002-6601-2165 https://github.com/obophenotype/uberon/issues/259 abdominal fat BTO:0004041 intra-abdominal fat BTO:0004041 organ fat BTO:0004041 visceral adipose tissue BTO:0004041 visceral fat BTO:0004041 Subcutaneous adipose tissue that is located in the abdominal region. CALOHA:TS-2406 abdominal subcutaneous adipose tissue subcutaneous abdominal fat subcutaneous fat of abdominal region uberon UBERON:0014455 subcutaneous abdominal adipose tissue UBERON:0014455 Subcutaneous adipose tissue that is located in the abdominal region. CALOHA:paula MGI:csmith http://orcid.org/0000-0002-6601-2165 https://github.com/obophenotype/uberon/issues/259 Subdivision of skeletal system that consists of all skeletal elements in the thoracic region of the trunk. In most vertebrates this is the rib cage and sternum. EHDAA2:0002013 FMA:77169 Wikipedia:Thoracic_skeleton skeleton of thorax thoracic part of axial skeleton thoracic skeleton uberon UBERON:0014477 thoracic skeleton UBERON:0014477 Subdivision of skeletal system that consists of all skeletal elements in the thoracic region of the trunk. In most vertebrates this is the rib cage and sternum. Wikipedia:Rib_cage https://orcid.org/0000-0002-6601-2165 thoracic skeleton EHDAA2:0002013 lamina of neuraxis neuraxis lamina FMA:83856 uberon UBERON:0014530 white matter lamina of neuraxis UBERON:0014530 lamina of neuraxis FMA:83856 neuraxis lamina FMA:83856 diencephalon lamina lamina of diencephalon FMA:62449 uberon UBERON:0014531 white matter lamina of diencephalon UBERON:0014531 diencephalon lamina FMA:62449 lamina of diencephalon FMA:62449 cerebral hemisphere lamina lamina of cerebral hemisphere FMA:67951 uberon UBERON:0014532 white matter lamina of cerebral hemisphere UBERON:0014532 cerebral hemisphere lamina FMA:67951 lamina of cerebral hemisphere FMA:67951 A ventral horn of spinal cord that is part of a thoracic spinal cord. BIRNLEX:1410 SCTID:367876000 uberon thoracic spinal cord anterior horn UBERON:0014610 thoracic spinal cord ventral horn UBERON:0014610 A ventral horn of spinal cord that is part of a thoracic spinal cord. OBOL:automatic thoracic spinal cord anterior horn BIRNLEX:1410 A gray matter of spinal cord that is part of a cervical spinal cord. BIRNLEX:1521 SCTID:362438009 uberon UBERON:0014613 cervical spinal cord gray matter UBERON:0014613 A gray matter of spinal cord that is part of a cervical spinal cord. OBOL:automatic A white matter of spinal cord that is part of a cervical spinal cord. BIRNLEX:1531 SCTID:174829001 uberon UBERON:0014614 cervical spinal cord white matter UBERON:0014614 A white matter of spinal cord that is part of a cervical spinal cord. OBOL:automatic A ventral horn of spinal cord that is part of a cervical spinal cord. BIRNLEX:1680 SCTID:174363005 uberon cervical spinal cord anterior horn UBERON:0014621 cervical spinal cord ventral horn UBERON:0014621 A ventral horn of spinal cord that is part of a cervical spinal cord. OBOL:automatic cervical spinal cord anterior horn BIRNLEX:1680 A gray matter of spinal cord that is part of a thoracic spinal cord. BIRNLEX:980 SCTID:362441000 uberon UBERON:0014636 thoracic spinal cord gray matter UBERON:0014636 A gray matter of spinal cord that is part of a thoracic spinal cord. OBOL:automatic A white matter of spinal cord that is part of a thoracic spinal cord. BIRNLEX:999 SCTID:367881009 uberon UBERON:0014637 thoracic spinal cord white matter UBERON:0014637 A white matter of spinal cord that is part of a thoracic spinal cord. OBOL:automatic A white matter that is part of a medulla oblongata. BAMS:mw BIRNLEX:1024 BIRNLEX:1414 FMA:83944 neuronames:778 substantia alba medullae oblongatae white matter of medulla white substance of medulla uberon medullary white matter UBERON:0014649 white matter of medulla oblongata UBERON:0014649 A white matter that is part of a medulla oblongata. OBOL:automatic substantia alba medullae oblongatae FMA:TA white matter of medulla FMA:83944 white substance of medulla FMA:83944 medullary white matter BAMS:mw An anatomical space that is enclosed by a pleuroperitoneal canal. EHDAA2:0004736 EMAPA:25034 pleuro-peritoneal canal cavity uberon UBERON:0014704 pleuroperitoneal canal lumen UBERON:0014704 An anatomical space that is enclosed by a pleuroperitoneal canal. OBOL:automatic pleuro-peritoneal canal cavity EMAPA:25034 An epithelium that is part of a median lingual swelling. EHDAA2:0001085 EMAPA:17188 uberon tuberculum impar epitheilium UBERON:0014705 median lingual swelling epithelium UBERON:0014705 An epithelium that is part of a median lingual swelling. OBOL:automatic tuberculum impar epitheilium EMAPA:17188 A neuromere that is part of the presumptive forebrain. forebrain segment segment of forebrain FMA:61996 forebrain neuromere uberon future prosencephalon UBERON:0014775 prosomere UBERON:0014775 A neuromere that is part of the presumptive forebrain. http://orcid.org/0000-0002-6601-2165 A neuromere that is part of the presumptive midbrain. mesomere midbrain segment segment of midbrain EHDAA2:0004352 FMA:61997 mesomere of nervous system neuromere of mesomere group uberon future mesencephalon mesomere group UBERON:0014776 midbrain neuromere UBERON:0014776 A neuromere that is part of the presumptive midbrain. http://orcid.org/0000-0002-6601-2165 mesomere group EHDAA2:0004352 A neuromere that is part of the presumptive spinal cord. TAO:0001332 ZFA:0001332 spinal cord metameric segment uberon spinal cord segment UBERON:0014777 spinal neuromere UBERON:0014777 A neuromere that is part of the presumptive spinal cord. http://orcid.org/0000-0002-6601-2165 spinal cord segment TAO:0001332 The lingual septum consists of a vertical layer of fibrous tissue, extending throughout the entire length of the median plane of the tongue, though not quite reaching the dorsum. It is thicker behind than in front, and occasionally contains a small fibrocartilage, about 6 mm. in length. It is well displayed by making a vertical section across the organ. EMAPA:18274 FMA:54813 SCTID:368727001 Wikipedia:Lingual_septum septum of tongue uberon median fibrous septum septum of tongue tongue septum UBERON:0014790 lingual septum UBERON:0014790 The lingual septum consists of a vertical layer of fibrous tissue, extending throughout the entire length of the median plane of the tongue, though not quite reaching the dorsum. It is thicker behind than in front, and occasionally contains a small fibrocartilage, about 6 mm. in length. It is well displayed by making a vertical section across the organ. Wikipedia:Lingual_septum septum of tongue FMA:54813 median fibrous septum Wikipedia:Lingual_septum septum of tongue Wikipedia:Lingual_septum tongue septum Wikipedia:Lingual_septum Any collection of muscles that is part of a pectoral complex. The pectoral complex comprises the pectoral girdle and the associated limb or fin. FMA:71296 muscles of upper limb musculature of upper limb musculi membri superioris set of muscles of upper limb upper limb musculature uberon UBERON:0014793 musculature of pectoral complex UBERON:0014793 Any collection of muscles that is part of a pectoral complex. The pectoral complex comprises the pectoral girdle and the associated limb or fin. OBOL:automatic muscles of upper limb FMA:71296 musculature of upper limb FMA:71296 musculi membri superioris FMA:TA set of muscles of upper limb FMA:71296 upper limb musculature FMA:71296 Any muscle organ that is part of a pectoral appendage (forelimb or pectoral fin). uberon UBERON:0014794 pectoral appendage muscle UBERON:0014794 Any muscle organ that is part of a pectoral appendage (forelimb or pectoral fin). OBOL:automatic White matter that is part of a brainstem [Automatically generated definition]. EMAPA:35189 FMA:282112 MA:0002741 SCTID:360442003 uberon brain stem white matter brainstem tract/commissure brainstem tracts brainstem tracts and commissures UBERON:0014891 brainstem white matter UBERON:0014891 White matter that is part of a brainstem [Automatically generated definition]. OBOL:automatic brain stem white matter EMAPA:35189 A muscle organ that consists of skeletal muscle tissue ensheathed in epimysium, that develops from myotome and that is innervated by some somatic motor neuron. Skeletal muscles are typically attached (via a tendon) to a bone but there are exceptions (e.g. intrinsic tongue muscles). skeletal muscle AAO:0011099 BTO:0001103 CALOHA:TS-0933 EFO:0000888 EHDAA:5035 EHDAA:5043 EHDAA:5978 EHDAA:5984 EMAPA:35988 EV:0100377 GAID:141 MA:0003148 MAT:0000302 MESH:D018482 MIAA:0000302 TAO:0005277 VHOG:0000319 XAO:0000174 ZFA:0005277 uberon UBERON:0014892 skeletal muscle organ, vertebrate UBERON:0014892 A muscle organ that consists of skeletal muscle tissue ensheathed in epimysium, that develops from myotome and that is innervated by some somatic motor neuron. Skeletal muscles are typically attached (via a tendon) to a bone but there are exceptions (e.g. intrinsic tongue muscles). GOC:dos A portion of tissue that will develop into vasculature. EFO:0003708 TAO:0005076 ZFA:0005076 uberon UBERON:0014903 primordial vasculature UBERON:0014903 A portion of tissue that will develop into vasculature. ZFA:0005076 ZFA:curator One of the primary blood vessel sprouts that originate from the dorsal aorta and posterior cardinal vein and align dorsoventrally at the myotomal boundaries between somites. EFO:0003664 TAO:0001285 XAO:0004075 ZFA:0001285 intersegmental vessel intersomitic blood vessel segmental vessel uberon UBERON:0014907 intersomitic vessel UBERON:0014907 One of the primary blood vessel sprouts that originate from the dorsal aorta and posterior cardinal vein and align dorsoventrally at the myotomal boundaries between somites. MGI:anna intersegmental vessel ZFA:0001285 intersomitic blood vessel XAO:0004075 segmental vessel ZFA:0001285 uberon UBERON:0014950 layer of developing cerebral cortex UBERON:0014950 FMA:83105 perimysial connective tissue of subepicardium subepicardial connective tissue uberon UBERON:0015128 subepicardial layer of epicardium UBERON:0015128 perimysial connective tissue of subepicardium FMA:83105 subepicardial connective tissue FMA:83105 Visceral intrapericardial fat contiguous with the myocardial surface. FMA:9871 epicardial adipose tissue pericardial adipose tissue uberon UBERON:0015129 epicardial fat UBERON:0015129 Visceral intrapericardial fat contiguous with the myocardial surface. DOI:10.5935/abc.20130138 A gland that is typically found in or near the orbital region, in or around either the medial or lateral canthi, and is typically associated with secretions onto the eyeball or associated ducts. Includes the Harderian, nictitans and lacrimal glands. ocular gland uberon orbital gland UBERON:0015152 gland of ocular region UBERON:0015152 A gland that is typically found in or near the orbital region, in or around either the medial or lateral canthi, and is typically associated with secretions onto the eyeball or associated ducts. Includes the Harderian, nictitans and lacrimal glands. http://orcid.org/0000-0002-6601-2165 https://github.com/obophenotype/uberon/issues/614 An eye consisting of multiple light-sensing organs. uberon UBERON:0015165 multi-unit eye UBERON:0015165 An eye consisting of multiple light-sensing organs. PMID:21062451 http://orcid.org/0000-0002-6601-2165 A region of somite adjacent to presomitic mesoderm. TAO:0001462 XAO:0004074 ZFA:0001462 uberon inter-somited border intersomitic boundary intersomitic fissure intersomitic junction segmental border somite boundary UBERON:0015178 somite border UBERON:0015178 A region of somite adjacent to presomitic mesoderm. http://orcid.org/0000-0002-6601-2165 intersomitic junction XAO:0004074 somite boundary ZFA:0001462 Epithelium located in the intersomitic region. XAO:0004077 intersomitic epithelium intersomitic membrane uberon UBERON:0015179 somite boundary epithelium UBERON:0015179 Epithelium located in the intersomitic region. XAO:0004077 XAO:EJS intersomitic epithelium XAO:0004077 intersomitic membrane XAO:0004077 An anatomical group whose component structures share a common function. AEO:0000093 uberon UBERON:0015203 non-connected functional system UBERON:0015203 An anatomical group whose component structures share a common function. AEO:0000093 AEO:JB FBC:DOS FBbt:00007278 A non-connected functional system that is composed primarily of a gland. EHDAA2:0002223 uberon UBERON:0015204 glandular system UBERON:0015204 A non-connected functional system that is composed primarily of a gland. OBOL:automatic Any structure that is placed on one side of the left-right axis of a bilaterian. uberon UBERON:0015212 lateral structure UBERON:0015212 Any structure that is placed on one side of the left-right axis of a bilaterian. http://orcid.org/0000-0002-6601-2165 A hollow, muscular organ, which, by contracting rhythmically, contributes to the circulation of lymph, blood or analogs. Examples: a chambered vertebrate heart; the tubular peristaltic heart of ascidians; the dorsal vessel of an insect; the lymoh heart of a reptile. heart cardiac pump heart or heart like organ circulatory vessel uberon cardiac structure UBERON:0015228 circulatory organ UBERON:0015228 A hollow, muscular organ, which, by contracting rhythmically, contributes to the circulation of lymph, blood or analogs. Examples: a chambered vertebrate heart; the tubular peristaltic heart of ascidians; the dorsal vessel of an insect; the lymoh heart of a reptile. http://orcid.org/0000-0002-6601-2165 A basement membrane of epithelium that is part of a respiratory system. MA:0001815 uberon UBERON:0015329 respiratory system basement membrane UBERON:0015329 A basement membrane of epithelium that is part of a respiratory system. OBOL:automatic MA:0002449 heart/pericardium uberon UBERON:0015410 heart plus pericardium UBERON:0015410 heart/pericardium MA:0002449 FMA:62798 portion of heterogeneous tissue uberon UBERON:0015757 heterogeneous tissue UBERON:0015757 portion of heterogeneous tissue FMA:62798 A smooth muscle tissue that is part of a hypodermis. FMA:77862 muscle layer in fatty layer of subcutaneous tissue uberon UBERON:0015783 smooth muscle layer in fatty layer of subcutaneous tissue UBERON:0015783 A smooth muscle tissue that is part of a hypodermis. OBOL:automatic muscle layer in fatty layer of subcutaneous tissue FMA:77862 An epithelium that is part of a camera-type eye. EMAPA:35957 MA:0003162 uberon UBERON:0015808 eye epithelium UBERON:0015808 An epithelium that is part of a camera-type eye. OBOL:automatic An epithelium that is part of a foregut. EMAPA:32922 MA:0003204 uberon UBERON:0015833 foregut epithelium UBERON:0015833 An epithelium that is part of a foregut. OBOL:automatic A capillary that is part of a lung. FMA:14121 capillary of lung uberon UBERON:0016405 pulmonary capillary UBERON:0016405 A capillary that is part of a lung. OBOL:automatic capillary of lung FMA:14121 A hole in the diaphragm through which the esophagus passes. FMA:58289 esophageal hiatus of diaphragm oesophageal aperture oesophageal hiatus uberon UBERON:0016458 esophageal hiatus UBERON:0016458 A hole in the diaphragm through which the esophagus passes. HP:0002036 esophageal hiatus of diaphragm FMA:58289 oesophageal aperture FMA:58289 oesophageal hiatus FMA:58289 Is the sensory system for the sense of hearing. EMAPA:36002 FMA:7192 MA:0002443 NCIT:C12889 NLXANAT:090817 Wikipedia:Auditory_system neuronames:2888 uberon UBERON:0016490 auditory system UBERON:0016490 Is the sensory system for the sense of hearing. NLXANAT:090817 Luminal space of the right ventricle of the heart. EMAPA:26047 FMA:9291 right ventricle lumen right ventricular cavity uberon UBERON:0016509 cavity of right ventricle UBERON:0016509 Luminal space of the right ventricle of the heart. http://orcid.org/0000-0002-6601-2165 right ventricle lumen EMAPA:26047 right ventricular cavity FMA:FMA Luminal space of the left atrium of the heart. EMAPA:26011 FMA:9465 left atrial cavity left atrium lumen uberon UBERON:0016513 cavity of left atrium UBERON:0016513 Luminal space of the left atrium of the heart. http://orcid.org/0000-0002-6601-2165 left atrial cavity FMA:FMA left atrium lumen EMAPA:26011 Luminal space of the left ventricle of the heart. EMAPA:26038 FMA:9466 left ventricular cavity uberon UBERON:0016514 cavity of left ventricle UBERON:0016514 Luminal space of the left ventricle of the heart. http://orcid.org/0000-0002-6601-2165 left ventricular cavity FMA:FMA Luminal space of the right atrium of the heart. EMAPA:26020 FMA:11359 right atrial cavity uberon UBERON:0016522 cavity of right atrium UBERON:0016522 Luminal space of the right atrium of the heart. http://orcid.org/0000-0002-6601-2165 right atrial cavity FMA:FMA The external part of the developing pharynx that is made of ectoderm. During vertebrate development, pockets form in pharyngeal ectoderm between the pharyngeal arches. UBERON:2001379 TAO:0001379 ZFA:0001379 uberon UBERON:0016545 pharyngeal ectoderm UBERON:0016545 The external part of the developing pharynx that is made of ectoderm. During vertebrate development, pockets form in pharyngeal ectoderm between the pharyngeal arches. PMID:23020903 http://orcid.org/0000-0002-6601-2165 A layer of of the central nervous system that is part of gray matter. grey matter layer FMA:83142 CNS gray matter layer CNS grey matter layer gray matter layer of neuraxis grey matter layer of neuraxis uberon UBERON:0016548 central nervous system gray matter layer UBERON:0016548 A layer of of the central nervous system that is part of gray matter. http://orcid.org/0000-0002-6601-2165 gray matter layer of neuraxis FMA:83142 A layer of of the central nervous system that is composed of white matter. white matter layer FMA:83898 CNS white matter layer white matter layer of neuraxis uberon UBERON:0016549 central nervous system white matter layer UBERON:0016549 A layer of of the central nervous system that is composed of white matter. http://orcid.org/0000-0002-6601-2165 white matter layer of neuraxis FMA:83898 uberon UBERON:0016550 spinal cord column UBERON:0016550 A white matter that is part of the midbrain. DHBA:10650 FMA:83936 HBA:265505382 mesencephalic white matter uberon UBERON:0016554 white matter of midbrain UBERON:0016554 A white matter that is part of the midbrain. OBOL:automatic mesencephalic white matter HBA:MESWM FMA:68861 Wikipedia:Rexed_laminae http://neurolex.org/wiki/Category:Rexed_spinal_cord_parcellation_scheme_region rexed lamina uberon UBERON:0016570 lamina of gray matter of spinal cord UBERON:0016570 rexed lamina FMA:68861 Primordium that develops into the central nervous system. UBERON:3000469 future CNS presumptive central nervous system uberon UBERON:0016879 future central nervous system UBERON:0016879 Primordium that develops into the central nervous system. http://orcid.org/0000-0002-6601-2165 Primordium that develops into the nervous system. UBERON:3000477 AAO:0000477 presumptive nervous system uberon UBERON:0016880 future nervous system UBERON:0016880 Primordium that develops into the nervous system. http://orcid.org/0000-0002-6601-2165 presumptive nervous system AAO:0000477 The part of the conceptus that may be lost before birth or will be discarded at birth, or when the embryo becomes an independent organism. AEO:0000195 EHDAA2:0000003 EMAPA:16042 extra-embryonic component extraembryonic component uberon UBERON:0016887 entire extraembryonic component UBERON:0016887 The part of the conceptus that may be lost before birth or will be discarded at birth, or when the embryo becomes an independent organism. AEO:0000195 AEO:JB extraembryonic component AEO:0000195 An embryonic anatomical entity that will turn into one or more other anatomical entities, perhaps with other anatomical entities, later in development. AEO:0000132 uberon UBERON:0016888 transitional anatomical structure UBERON:0016888 An embryonic anatomical entity that will turn into one or more other anatomical entities, perhaps with other anatomical entities, later in development. AEO:0000132 AEO:JB The zone of the skin that surrounds a lip and is colored red due to thin epithelium and presence of eleidin. vermilion border FMA:59824 SCTID:362086008 vermilion border of lip vermilion of lip uberon UBERON:0016915 vermilion UBERON:0016915 The zone of the skin that surrounds a lip and is colored red due to thin epithelium and presence of eleidin. http://orcid.org/0000-0002-6601-2165 A vermilion that is part of a lower lip. FMA:59828 SCTID:245800000 vermilion border of lower lip vermilion of lower lip uberon UBERON:0016919 lower vermilion UBERON:0016919 A vermilion that is part of a lower lip. OBOL:automatic vermilion of lower lip FMA:59828 A mesenchyme-derived anatomical entity undergoing a transtion to become another structure. AEO:0001016 uberon UBERON:0017650 developing mesenchymal structure UBERON:0017650 A mesenchyme-derived anatomical entity undergoing a transtion to become another structure. AEO:0001016 AEO:JB A viscus that is part of a abdomen. FMA:32413 FMA:67355 abdominal viscera abdominal viscera set set of abdominal viscera uberon UBERON:0017672 abdominal viscera UBERON:0017672 A viscus that is part of a abdomen. OBOL:automatic abdominal viscera FMA:32413 abdominal viscera set FMA:32413 set of abdominal viscera FMA:32413 FMA:83521 uberon UBERON:0018135 fibrocollagenous connective tissue UBERON:0018135 A zone of skin that is part of a lower lip. FMA:24767 SCTID:281630002 lower lip skin uberon UBERON:0018150 skin of lower lip UBERON:0018150 A zone of skin that is part of a lower lip. OBOL:automatic lower lip skin FMA:24767 A boundary delimiting a rhombomere. rhombomere junction uberon UBERON:0018239 rhombomere boundary UBERON:0018239 A boundary delimiting a rhombomere. GO:0021654 One of the veins draining a meninix. FMA:50839 SCTID:84842006 uberon UBERON:0018251 meningeal vein UBERON:0018251 One of the veins draining a meninix. http://orcid.org/0000-0002-6601-2165 EHDAA2:0001842 EMAPA:35578 uberon UBERON:0018254 skeletal musculature UBERON:0018254 Any portion of submucosa that lines the digestive tract. uberon UBERON:0018257 submucosa of digestive tract UBERON:0018257 Any portion of submucosa that lines the digestive tract. http://orcid.org/0000-0002-6601-2165 Any organ component layer that consists of muscle tissue. FMA:45634 NCIT:C75444 UMLS:C0225358 uberon UBERON:0018260 layer of muscle tissue UBERON:0018260 Any organ component layer that consists of muscle tissue. http://orcid.org/0000-0002-6601-2165 Foramen that allows the passge of the glossopharyngeal nerve (cranial nerve IX). uberon UBERON:0018321 foramen for glossopharyngeal nerve UBERON:0018321 Foramen that allows the passge of the glossopharyngeal nerve (cranial nerve IX). PHENOSCAPE:alex Muscle innervated by the trigeminal nerve (Cranial Nerve V). MFMO:0000072 muscle innervated by the trigeminal nerve uberon UBERON:0018544 trigeminal nerve muscle UBERON:0018544 Muscle innervated by the trigeminal nerve (Cranial Nerve V). MFMO:0000072 FMA:83450 ventricular cardiac muscle tissue ventricular heart muscle uberon ventricular muscle UBERON:0018649 cardiac muscle tissue of ventricle UBERON:0018649 ventricular cardiac muscle tissue http://orcid.org/0000-0002-6601-2165 ventricular heart muscle http://orcid.org/0000-0002-6601-2165 ventricular muscle http://orcid.org/0000-0002-6601-2165 An interconnected tubular multi-tissue structure that contains fluid that is actively transported around the heart. FMA:73747 ZFA:0005811 cardiac vasculature uberon UBERON:0018674 heart vasculature UBERON:0018674 An interconnected tubular multi-tissue structure that contains fluid that is actively transported around the heart. ZFA:0005811 ZFA:CVS cardiac vasculature FMA:73747 BTO:0002439 genital mucosa uberon UBERON:0019042 reproductive system mucosa UBERON:0019042 genital mucosa BTO:0002439 Adipose tissue which is located throughout skeletal muscle and is responsible for the marbling seen in certain cuts of beef. In humans, excess accumulation of intramuscular fat is associated with insulin resistance and type 2 diabetes. BTO:0004043 uberon intramuscular fat UBERON:0019143 intramuscular adipose tissue UBERON:0019143 Adipose tissue which is located throughout skeletal muscle and is responsible for the marbling seen in certain cuts of beef. In humans, excess accumulation of intramuscular fat is associated with insulin resistance and type 2 diabetes. BTO:0004043 intramuscular fat BTO:0004043 BTO:0004626 uberon carotid endothelium carotid epithelium UBERON:0019189 carotid artery endothelium UBERON:0019189 carotid endothelium BTO:0004626 Any region of epithelium that is part of a skin region. BTO:0004382 uberon UBERON:0019204 skin epithelium UBERON:0019204 Any region of epithelium that is part of a skin region. http://orcid.org/0000-0002-6601-2165 EMAPA:35869 MA:0003178 uberon UBERON:0019206 tongue papilla epithelium UBERON:0019206 The part of the eye that consists of both the retina and the optic choroid. SCTID:110701000 chorioretina choroid and retina retinachoroid retinachoroidal region uberon UBERON:0019207 chorioretinal region UBERON:0019207 The part of the eye that consists of both the retina and the optic choroid. UBERON:drseb http://orcid.org/0000-0002-6601-2165 A white matter that is part of the hindbrain. DHBA:10668 FMA:268636 uberon UBERON:0019258 white matter of hindbrain UBERON:0019258 A white matter that is part of the hindbrain. OBOL:automatic A white matter that is part of the forebrain. DHBA:10557 FMA:268634 uberon UBERON:0019261 white matter of forebrain UBERON:0019261 A white matter that is part of the forebrain. OBOL:automatic A white matter that is part of the myelencephalon. HBA:9298 myelencephalic white matter uberon UBERON:0019262 white matter of myelencephalon UBERON:0019262 A white matter that is part of the myelencephalon. OBOL:automatic myelencephalic white matter HBA:MYWM DHBA:10654 FMA:268630 gray matter of the hindbrain uberon UBERON:0019263 gray matter of hindbrain UBERON:0019263 gray matter of the hindbrain DHBA:HGM DHBA:10157 FMA:268608 uberon UBERON:0019264 gray matter of forebrain UBERON:0019264 DHBA:10649 FMA:83913 uberon UBERON:0019267 gray matter of midbrain UBERON:0019267 FMA:83912 uberon UBERON:0019269 gray matter of diencephalon UBERON:0019269 FMA:83939 HBA:9287 uberon UBERON:0019291 white matter of metencephalon UBERON:0019291 FMA:83940 uberon UBERON:0019292 white matter of pons UBERON:0019292 UBERON:0025819 BIRNLEX:1069 FMA:83942 HBA:265505486 pontine white matter tracts predominantly white regional part of pontine tegmentum substantia alba tegmenti pontis white matter of pontile tegmentum white substance of pontile tegmentum uberon UBERON:0019293 white matter of pontine tegmentum UBERON:0019293 pontine white matter tracts HBA:PoWM predominantly white regional part of pontine tegmentum BIRNLEX:1069 substantia alba tegmenti pontis FMA:TA white matter of pontile tegmentum FMA:83942 white substance of pontile tegmentum FMA:83942 EMAPA:35952 MA:0003174 uberon UBERON:0019304 sensory organ epithelium UBERON:0019304 An exocrine gland that is part of a integumental system. integumental exocrine gland integumental system exocrine gland uberon UBERON:0019319 exocrine gland of integumental system UBERON:0019319 An exocrine gland that is part of a integumental system. GOC:dos http://orcid.org/0000-0002-6601-2165 integumental exocrine gland http://orcid.org/0000-0002-6601-2165 integumental system exocrine gland http://orcid.org/0000-0002-6601-2165 The spinal accessory nucleus lies within the cervical spinal cord (C1-C5) in the ventral horn. The nucleus ambiguus is classically said to provide the 'cranial component' of the accessory nerve. However, the very existence of this cranial component has been recently questioned and seen as contributing exclusively to the vagus nerve. The terminology continues to be used in describing both human anatomy, and that of other animals. FMA:83965 MA:0001033 Wikipedia:Spinal_accessory_nucleus neuronames:2003 accessory neural nucleus uberon accessory nucleus of anterior column of spinal cord nucleus of accessory nerve nucleus of the accessory nerve nucleus of the spinal accessory nerve spinal accessory nucleus UBERON:0020358 See also: Wikipedia:Spinal_accessory_nucleus accessory XI nerve nucleus UBERON:0020358 The spinal accessory nucleus lies within the cervical spinal cord (C1-C5) in the ventral horn. The nucleus ambiguus is classically said to provide the 'cranial component' of the accessory nerve. However, the very existence of this cranial component has been recently questioned and seen as contributing exclusively to the vagus nerve. The terminology continues to be used in describing both human anatomy, and that of other animals. Wikipedia:Spinal_accessory_nucleus accessory neural nucleus FMA:83965 accessory nucleus of anterior column of spinal cord NeuroNames:2003 nucleus of accessory nerve NeuroNames:2003 nucleus of the accessory nerve NeuroNames:2003 nucleus of the spinal accessory nerve NeuroNames:2003 spinal accessory nucleus http://orcid.org/0000-0002-6601-2165 FMA:260712 cerebral fascicle cerebral fasciculus nerve fascicle of telencephalon telencephalic fascicle telencephalic nerve fascicle uberon UBERON:0022248 cerebral nerve fasciculus UBERON:0022248 cerebral fascicle FMA:260712 cerebral fasciculus FMA:260712 FMA:58315 uberon surface of region of wall of eyeball UBERON:0022288 surface of eyeball UBERON:0022288 surface of region of wall of eyeball FMA:58315 A portion of organism substance that is secreted by a reproductive gland. uberon genital fluid genital secretion reproductive system fluid reproductive system fluid/secretion reproductive system secretion UBERON:0022293 reproductive gland secretion UBERON:0022293 A portion of organism substance that is secreted by a reproductive gland. UBERON:cjm Single layer of a laminar structure, identified by different density, arrangement or size of cells and processes arranged in flattened layers or lamina[CUMBO]. lamina layer NLX:149357 uberon UBERON:0022303 nervous system cell part layer UBERON:0022303 Single layer of a laminar structure, identified by different density, arrangement or size of cells and processes arranged in flattened layers or lamina[CUMBO]. NLX:149357 lamina CUMBO:CUMBO layer CUMBO:CUMBO Serous membrane layer that is adjacent to and lines an organ. FMA:15860 visceral wall of serous membrane uberon UBERON:0022350 visceral serous membrane UBERON:0022350 Serous membrane layer that is adjacent to and lines an organ. http://orcid.org/0000-0002-6601-2165 visceral wall of serous membrane FMA:15860 Serous membrane layer that lines to a body cavity. cavity lining FMA:15859 MA:0002448 parietal wall of serous membrane uberon UBERON:0022351 parietal serous membrane UBERON:0022351 Serous membrane layer that lines to a body cavity. http://orcid.org/0000-0002-6601-2165 cavity lining MA:0002448 parietal wall of serous membrane FMA:15859 A specific region of the foregut into the area in which the lung will develop. SCTID:34922002 lung field uberon UBERON:0022361 lung field UBERON:0022361 A specific region of the foregut into the area in which the lung will develop. GOC:dph GOC:mtg_lung An embryonic or larval epithelium that is committed to form part of the nervous system. neurepithelium AEO:0001008 BTO:0000314 EHDAA2_RETIRED:0004654 FMA:64807 embryonic neuroepithelium neuroepithelium uberon UBERON:0034705 developing neuroepithelium UBERON:0034705 An embryonic or larval epithelium that is committed to form part of the nervous system. AEO:0001008 AEO:JB neurepithelium BTO:0000314 embryonic neuroepithelium http://orcid.org/0000-0002-6601-2165 neuroepithelium AEO:0001008 An epithelium that is undergoing proliferation to provide large numbers of neuronal cells. AEO:0001009 uberon UBERON:0034706 proliferating neuroepithelium UBERON:0034706 An epithelium that is undergoing proliferation to provide large numbers of neuronal cells. AEO:0001009 A neuroepithelium some of whose cells are undergoing terminal differentiation to become neuronal cells. AEO:0001010 uberon UBERON:0034707 differentiating neuroepithelium UBERON:0034707 A neuroepithelium some of whose cells are undergoing terminal differentiation to become neuronal cells. AEO:0001010 DHBA:12694 EMAPA:32916 marginal zone of hindbrain uberon UBERON:0034709 hindbrain marginal layer UBERON:0034709 marginal zone of hindbrain DHBA:12694 EHDAA2:0001267 EMAPA:17585 spinal cord lateral wall ventricular layer uberon UBERON:0034710 spinal cord ventricular layer UBERON:0034710 spinal cord lateral wall ventricular layer EHDAA2:0001267 The layer of the developing cerebral cortex that is formed from the first cohort of neurons to migrate out of the cortical ventricular zone; split by the second wave into marginal zone and subplate. EMAPA:35261 uberon UBERON:0034711 cortical preplate UBERON:0034711 The layer of the developing cerebral cortex that is formed from the first cohort of neurons to migrate out of the cortical ventricular zone; split by the second wave into marginal zone and subplate. PMID:12626695 Any of the cranial nerves, or their central nervous system analogs (the optic tract, the epiphyseal tract). These analogs are not true nerves, and are instead evaginated sensory afferents emanating from the brain. uberon cranial nerve fiber bundle cranial nerve fiber tract cranial nerve or tract neuron projection bundle from brain UBERON:0034713 cranial neuron projection bundle UBERON:0034713 Any of the cranial nerves, or their central nervous system analogs (the optic tract, the epiphyseal tract). These analogs are not true nerves, and are instead evaginated sensory afferents emanating from the brain. ISBN:0471888893 http://orcid.org/0000-0002-6601-2165 cranial nerve fiber bundle http://orcid.org/0000-0002-6601-2165 cranial nerve fiber tract http://orcid.org/0000-0002-6601-2165 cranial nerve or tract http://orcid.org/0000-0002-6601-2165 neuron projection bundle from brain http://orcid.org/0000-0002-6601-2165 A taste bud that is located external to the digestive tube, on the head or body, as found in species such as goldfish. uberon UBERON:0034717 integumental taste bud UBERON:0034717 A taste bud that is located external to the digestive tube, on the head or body, as found in species such as goldfish. PMID:11921337 http://orcid.org/0000-0002-6601-2165 A taste bud that is located on a lip. uberon UBERON:0034719 lip taste bud UBERON:0034719 A taste bud that is located on a lip. PMID:11921337 http://orcid.org/0000-0002-6601-2165 A taste bud that is located on the skin of the head. uberon UBERON:0034720 head taste bud UBERON:0034720 A taste bud that is located on the skin of the head. http://orcid.org/0000-0002-6601-2165 A taste bud that is located in the pharynx. uberon UBERON:0034721 pharyngeal taste bud UBERON:0034721 A taste bud that is located in the pharynx. http://orcid.org/0000-0002-6601-2165 A taste bud that is located in the esophagus. uberon UBERON:0034724 esophageal taste bud UBERON:0034724 A taste bud that is located in the esophagus. http://orcid.org/0000-0002-6601-2165 A taste bud that is located on the skin of the trunk. uberon UBERON:0034726 trunk taste bud UBERON:0034726 A taste bud that is located on the skin of the trunk. http://orcid.org/0000-0002-6601-2165 The autonomic nerve is a small nerve which carries postganglionic sympathetic and parasympathetic neurons from the zygomaticotemporal nerve; a branch of the maxillary nerve, to the lacrimal nerve; a branch of the ophthalmic nerve. These neurons derive from the superior cervical ganglion and the pterygopalatine ganglion respectively. They will travel to the lacrimal gland via the lacrimal nerve. Parasympathetic will induce lacrimation and vice versa. FMA:5866 MESH:D017776 SCTID:276145003 Wikipedia:Autonomic_nerve nervus visceralis visceral nerve uberon UBERON:0034728 autonomic nerve UBERON:0034728 The autonomic nerve is a small nerve which carries postganglionic sympathetic and parasympathetic neurons from the zygomaticotemporal nerve; a branch of the maxillary nerve, to the lacrimal nerve; a branch of the ophthalmic nerve. These neurons derive from the superior cervical ganglion and the pterygopalatine ganglion respectively. They will travel to the lacrimal gland via the lacrimal nerve. Parasympathetic will induce lacrimation and vice versa. Wikipedia:Autonomic_nerve nervus visceralis FMA:5866 visceral nerve FMA:5866 SCTID:181098007 uberon UBERON:0034729 sympathetic nerve UBERON:0034729 FMA:79770 NCIT:C41168 uberon UBERON:0034769 lymphomyeloid tissue UBERON:0034769 Any substance in the body or expelled from the body that is in a gaseous state. FMA:84580 gas in anatomical space portion of gas in anatomical space uberon UBERON:0034873 bodily gas UBERON:0034873 Any substance in the body or expelled from the body that is in a gaseous state. http://orcid.org/0000-0002-6601-2165 portion of gas in anatomical space FMA:84580 Any portion of gas located in a part of the respiratory system that is composed primarily of air. FMA:84581 respiratory air respiratory system air uberon UBERON:0034874 air in respiratory system UBERON:0034874 Any portion of gas located in a part of the respiratory system that is composed primarily of air. http://orcid.org/0000-0002-6601-2165 respiratory air FMA:84581 The area of axial mesoderm that develops into the prechordal plate. prechordal mesenchyme uberon UBERON:0034878 prechordal mesoderm UBERON:0034878 The area of axial mesoderm that develops into the prechordal plate. MGI:anna Endocardium that is part of the left atrium. FMA:7286 SCTID:190064008 VHOG:0001226 endocardium of left atrium left atrial endocardium uberon left atrium endocardial tissue UBERON:0034903 left atrium endocardium UBERON:0034903 Endocardium that is part of the left atrium. http://orcid.org/0000-0002-6601-2165 endocardium of left atrium FMA:7286 left atrium endocardial tissue VHOG:0001226 lumen of gland uberon UBERON:0034905 gland lumen UBERON:0034905 An multicellular anatomical structure that has subparts of multiple organs as a part. CARO:0020001 uberon anatomical cluster UBERON:0034921 multi organ part structure UBERON:0034921 An multicellular anatomical structure that has subparts of multiple organs as a part. CARO:0020001 anatomical cluster CARO:0020001 A cluster of cells, largely surrounded by a morphological boundary. CARO:0020002 FMA:62807 uberon UBERON:0034922 cell cluster UBERON:0034922 A cluster of cells, largely surrounded by a morphological boundary. CARO:0020002 2 Material anatomical entity consisting of multiple anatomical structures that are not connected to each other. CARO:0020000 uberon UBERON:0034923 disconnected anatomical group UBERON:0034923 Material anatomical entity consisting of multiple anatomical structures that are not connected to each other. CARO:0020000 A collection of anatomical structures that are alike in terms of their morphology or developmental origin. uberon UBERON:0034925 anatomical collection UBERON:0034925 A collection of anatomical structures that are alike in terms of their morphology or developmental origin. http://orcid.org/0000-0002-6601-2165 A region or zone on the surface of an organism that encompasses skin and any adnexa, down through muscles and bounded by underlying skeletal support structures. uberon UBERON:0034929 external soft tissue zone UBERON:0034929 A region or zone on the surface of an organism that encompasses skin and any adnexa, down through muscles and bounded by underlying skeletal support structures. http://orcid.org/0000-0002-6601-2165 Any organ component layer that consists of smooth muscle tissue. uberon UBERON:0034933 layer of smooth muscle tissue UBERON:0034933 Any organ component layer that consists of smooth muscle tissue. http://orcid.org/0000-0002-6601-2165 FMA:55268 organ sector organ zonal region organ zone uberon organ region with floating fiat boundary UBERON:0034944 zone of organ UBERON:0034944 organ sector FMA:55268 organ zone FMA:55268 organ region with floating fiat boundary FMA:55268 Any portion of gas located in a part of the respiratory system. respiratory gas respiratory system gas uberon UBERON:0034947 gas in respiratory system UBERON:0034947 Any portion of gas located in a part of the respiratory system. http://orcid.org/0000-0002-6601-2165 NCIT:C25787 UMLS:C1512086 uberon duct epithelium ductal epithelium UBERON:0034969 epithelial layer of duct UBERON:0034969 DHBA:12682 EMAPA:32917 hindbrain mantle layer uberon UBERON:0034994 hindbrain cortical intermediate zone UBERON:0034994 hindbrain mantle layer EMAPA:32917 Mesenchyme that is part of a developing jaw [Automatically generated definition]. EMAPA:32907 EMAPA:35454 uberon UBERON:0034995 jaw mesenchyme UBERON:0034995 Mesenchyme that is part of a developing jaw [Automatically generated definition]. OBOL:automatic EMAPA:32904 MA:0003220 uberon UBERON:0035037 jaw epithelium UBERON:0035037 Any material entity that is located in the digestive tract. This includes undigested food and liquid as well as unexcreted waste products. It also includes other entities such as ingested stones used to aid digestion. Any microbial cells or cell populations are also included. uberon ingested material entity UBERON:0035118 material entity in digestive tract UBERON:0035118 Any material entity that is located in the digestive tract. This includes undigested food and liquid as well as unexcreted waste products. It also includes other entities such as ingested stones used to aid digestion. Any microbial cells or cell populations are also included. https://github.com/EnvironmentOntology/envo/issues/110 Anatomical surface, which is the external surface of the whole body. Examples: There is only one body surface. FMA:61695 NCIT:C29667 SCTID:261060002 UMLS:C0489451 surface of body uberon UBERON:0035159 entire surface of organism UBERON:0035159 Anatomical surface, which is the external surface of the whole body. Examples: There is only one body surface. FMA:61695 surface of body FMA:61695 FMA:70506 NCIT:C32837 SCTID:360629008 UMLS:C1182571 internal carotid arterial subdivision subdivision of internal carotid artery uberon UBERON:0035237 branch of internal carotid artery UBERON:0035237 internal carotid arterial subdivision FMA:70506 subdivision of internal carotid artery FMA:70506 FMA:70505 NCIT:C32552 SCTID:244216003 UMLS:C0447038 external carotid arterial subdivision subdivision of external carotid artery uberon UBERON:0035398 branch of external carotid artery UBERON:0035398 external carotid arterial subdivision FMA:70505 subdivision of external carotid artery FMA:70505 Any of several arteries that arise from the aorta and supply blood to the esophagus. FMA:4149 NCIT:C32535 SCTID:56548006 UMLS:C0226294 aortic esophageal artery oesophageal artery uberon UBERON:0035539 esophageal artery UBERON:0035539 Any of several arteries that arise from the aorta and supply blood to the esophagus. ncithesaurus:Esophageal_Artery aortic esophageal artery FMA:4149 oesophageal artery FMA:4149 FMA:51797 SCTID:149683007 ciliary vein uberon UBERON:0035546 uveal vein UBERON:0035546 ciliary vein FMA:51797 The part of the circulatory system that lies within the subcutaneous tissue layers close to the surface of the skin. FMA:225275 superficial part of circulatory system superficial vasculature dermis vasculature hypodermis vasculature uberon skin vasculature subcutaneous vasculature vasculature of skin UBERON:0035549 vasculature of integument UBERON:0035549 The part of the circulatory system that lies within the subcutaneous tissue layers close to the surface of the skin. http://orcid.org/0000-0002-6601-2165 vasculature of skin FMA:225275 Any of the veins carrying deoxygenated blood from the subcutaneous tissue layers. FMA:76719 NCIT:C33666 SCTID:341382008 UMLS:C0226513 Wikipedia:Superficial_vein uberon superfical vein superficial veins superficial vessels UBERON:0035550 superficial vein UBERON:0035550 Any of the veins carrying deoxygenated blood from the subcutaneous tissue layers. ncithesaurus:Superficial_Vein superfical vein Wikipedia:Superficial_vein superficial veins Wikipedia:Superficial_vein superficial vessels Wikipedia:Superficial_vein The part of the circulatory system that lies deep beneath the subcutaneous tissue layers away from the surface of the skin. deep part of circulatory system uberon UBERON:0035551 deep vasculature UBERON:0035551 The part of the circulatory system that lies deep beneath the subcutaneous tissue layers away from the surface of the skin. http://orcid.org/0000-0002-6601-2165 A blood vessel carrying deoxygenated blood far beneath the skin usually accompanying an artery. FMA:76718 NCIT:C32444 SCTID:341484008 UMLS:C0226514 Wikipedia:Deep_vein uberon deep veins deep vessels UBERON:0035552 deep vein UBERON:0035552 A blood vessel carrying deoxygenated blood far beneath the skin usually accompanying an artery. ncithesaurus:Deep_Vein deep veins Wikipedia:Deep_vein deep vessels Wikipedia:Deep_vein Any chamber of the left side of the heart. FMA:7166 SCTID:362008007 uberon UBERON:0035553 left cardiac chamber UBERON:0035553 Any chamber of the left side of the heart. http://orcid.org/0000-0002-6601-2165 Any chamber of the right side of the heart. FMA:7165 SCTID:362007002 uberon UBERON:0035554 right cardiac chamber UBERON:0035554 Any chamber of the right side of the heart. http://orcid.org/0000-0002-6601-2165 The parts of the orbital region that are outside of the the eyeball, including the lacrimal apparatus, the extraocular muscles and the eyelids, eyelashes, eyebrows and the conjunctiva. FMA:76554 NCIT:C32574 SCTID:120612006 UMLS:C0229243 Wikipedia:Accessory_visual_structures uberon accessory parts of orbital region accessory visual structures accessory visual structures set adnexal parts of orbital region appendage of eye eye adnexa set of accessory visual structures UBERON:0035639 ocular adnexa UBERON:0035639 The parts of the orbital region that are outside of the the eyeball, including the lacrimal apparatus, the extraocular muscles and the eyelids, eyelashes, eyebrows and the conjunctiva. HPO:pr UBERON:cjm http://medical-dictionary.thefreedictionary.com/ocular+adnexa https://github.com/obophenotype/uberon/issues/1132 accessory visual structures FMA:76554 Wikipedia:Accessory_visual_structures accessory visual structures set FMA:76554 appendage of eye http://medical-dictionary.thefreedictionary.com/ocular+adnexa set of accessory visual structures FMA:76554 Any nerve that innervates the larynx. MESH:D007823 SCTID:307013006 uberon UBERON:0035642 laryngeal nerve UBERON:0035642 Any nerve that innervates the larynx. UBERON:cjm EHDAA2:0004181 FMA:9464 cardiac chamber cavity heart cavity heart lumen uberon UBERON:0035763 cavity of cardiac chamber UBERON:0035763 cardiac chamber cavity FMA:9464 heart cavity FMA:9464 heart lumen EHDAA2:0004181 FMA:223208 NCIT:C12930 UMLS:C1512970 uberon UBERON:0035767 intrapulmonary bronchus UBERON:0035767 The primordial mouth region of the developing head. FMA:293105 primitive mouth primordial mouth uberon UBERON:0035804 future mouth UBERON:0035804 The primordial mouth region of the developing head. MP:0003119 primitive mouth FMA:293105 FMA:12241 SCTID:304404008 uberon UBERON:0035809 serous cavity UBERON:0035809 The sum of epicardial and paracardial fat deposits. SCTID:42267001 ZFA:0005765 uberon UBERON:0035814 pericardial fat UBERON:0035814 The sum of epicardial and paracardial fat deposits. DOI:10.5935/abc.20130138 Fat deposits in the mediastinum outside the parietal pericardium . intrathoracic fat uberon UBERON:0035815 paracardial fat UBERON:0035815 Fat deposits in the mediastinum outside the parietal pericardium . DOI:10.5935/abc.20130138 intrathoracic fat DOI:10.5935/abc.20130138 Any fat deposit surrounding a visceral organ. uberon UBERON:0035818 visceral fat UBERON:0035818 Any fat deposit surrounding a visceral organ. UBERON:cjm The part of the ventral body cavity that is within the abdominal segment of the trunk, which encompasses the abdomen proper plus pelvic cavity. FMA:12267 Wikipedia:Abdominopelvic_cavity uberon UBERON:0035819 abdominopelvic cavity UBERON:0035819 The part of the ventral body cavity that is within the abdominal segment of the trunk, which encompasses the abdomen proper plus pelvic cavity. UBERON:cjm A serous sac that is the aggregate of the peritoneum and the peritoneal cavity, located in the abdominal cavity. EMAPA:16137 FMA:9908 uberon peritoneal component UBERON:0035820 peritoneal sac UBERON:0035820 A serous sac that is the aggregate of the peritoneum and the peritoneal cavity, located in the abdominal cavity. https://github.com/obophenotype/uberon/issues/86 peritoneal component EMAPA:16137 BTO:0004378 FMA:67473 blood vessel wall uberon vascular wall UBERON:0035965 wall of blood vessel UBERON:0035965 blood vessel wall FMA:67473 vascular wall BTO:0004378 EHDAA2:0004070 uberon UBERON:0036072 respiratory primordium epithelium UBERON:0036072 EHDAA2:0004071 respiratory primordium associated mesenchyme uberon UBERON:0036073 respiratory primordium mesenchyme UBERON:0036073 respiratory primordium associated mesenchyme EHDAA2:0004071 An region of the mesoderm that includes anterior lateral mesoderm of the first heart field plus contiguous pharyngeal mesoderm that gives rise to second-heart-field-derived regions of the heart and branchiomeric muscles. uberon UBERON:0036146 cardiopharyngeal field UBERON:0036146 An region of the mesoderm that includes anterior lateral mesoderm of the first heart field plus contiguous pharyngeal mesoderm that gives rise to second-heart-field-derived regions of the heart and branchiomeric muscles. http://www.nature.com/nature/journal/v520/n7548/full/nature14435.html#bx1 https://orcid.org/0000-0003-3308-6245 FMA:83520 uberon UBERON:0036186 fibroelastic connective tissue UBERON:0036186 Material anatomical entity that forms the outermost boundary of an anatomical structure. AAO:0010270 ZFA:0005594 uberon UBERON:0036215 anatomical surface region UBERON:0036215 Material anatomical entity that forms the outermost boundary of an anatomical structure. https://github.com/obophenotype/uberon/issues/1324 A bodily fluid that is located in the coelom. BTO:0001708 uberon UBERON:0036217 coelomic fluid UBERON:0036217 A bodily fluid that is located in the coelom. PMID:10874572 https://github.com/obophenotype/uberon/issues/1326 Any gland that is part os the respiratory system. uberon UBERON:0036225 respiratory system gland UBERON:0036225 Any gland that is part os the respiratory system. UBERON:cjm A notochord that has persisted beyond the embryonic stage. uberon UBERON:0036242 post-embryonic notochord UBERON:0036242 A notochord that has persisted beyond the embryonic stage. UBERON:cjm A transudate found in the serous sac. serous fluid FMA:20932 serous sac fluid uberon UBERON:0036244 secretion of serous membrane UBERON:0036244 A transudate found in the serous sac. FMA:20932 serous fluid FMA:20932 FMA:53133 cranial orifice skull orifice uberon UBERON:0036253 orifice of skull UBERON:0036253 cranial orifice FMA:53133 skull orifice FMA:53133 The zygomaticotemporal nerve or zygomaticotemporal branch (temporal branch) is derived from the maxillary branch of the trigeminal nerve (Cranial nerve V). It runs along the lateral wall of the orbit in a groove in the zygomatic bone, receives a branch of communication from the lacrimal, and passes through zygomaticotemporal foramen in the zygomatic bone to enter the temporal fossa. It ascends between the bone, and substance of the Temporalis muscle, pierces the temporal fascia about 2.5 cm. above the zygomatic arch, and is distributed to the skin of the side of the forehead, and communicates with the facial nerve and with the auriculotemporal branch of the mandibular nerve. As it pierces the temporal fascia, it gives off a slender twig, which runs between the two layers of the fascia to the lateral angle of the orbit. FMA:52972 SCTID:280243001 Wikipedia:Zygomaticotemporal_nerve ramus zygomaticotemporalis (Nervus zygomaticus) zygomaticotemporal branch of zygomatic nerve uberon zygomaticotemporal zygomaticotemporal branch UBERON:0036264 zygomaticotemporal nerve UBERON:0036264 The zygomaticotemporal nerve or zygomaticotemporal branch (temporal branch) is derived from the maxillary branch of the trigeminal nerve (Cranial nerve V). It runs along the lateral wall of the orbit in a groove in the zygomatic bone, receives a branch of communication from the lacrimal, and passes through zygomaticotemporal foramen in the zygomatic bone to enter the temporal fossa. It ascends between the bone, and substance of the Temporalis muscle, pierces the temporal fascia about 2.5 cm. above the zygomatic arch, and is distributed to the skin of the side of the forehead, and communicates with the facial nerve and with the auriculotemporal branch of the mandibular nerve. As it pierces the temporal fascia, it gives off a slender twig, which runs between the two layers of the fascia to the lateral angle of the orbit. Wikipedia:Zygomaticotemporal_nerve ramus zygomaticotemporalis (Nervus zygomaticus) FMA:52972 zygomaticotemporal branch of zygomatic nerve FMA:52972 zygomaticotemporal Wikipedia:Zygomaticotemporal_nerve zygomaticotemporal branch Wikipedia:Zygomaticotemporal_nerve Wall of ventricle which is continuous with the wall of aorta. FMA:9556 left ventricular wall uberon UBERON:0036285 wall of left ventricle UBERON:0036285 Wall of ventricle which is continuous with the wall of aorta. FMA:9556 left ventricular wall FMA:9556 Wall of ventricle which is continuous with the wall of pulmonary trunk. FMA:9533 right ventricular wall uberon UBERON:0036286 wall of right ventricle UBERON:0036286 Wall of ventricle which is continuous with the wall of pulmonary trunk. FMA:9533 right ventricular wall FMA:9533 FMA:9560 uberon UBERON:0036288 anterior wall of left ventricle UBERON:0036288 Region of wall of right ventricle which is continuous with the lateral and septal walls of right ventricle. FMA:9553 uberon UBERON:0036289 anterior wall of right ventricle UBERON:0036289 Region of wall of right ventricle which is continuous with the lateral and septal walls of right ventricle. FMA:9553 FMA:87177 uberon UBERON:0036290 myocardium of anterior wall of left ventricle UBERON:0036290 FMA:260877 uberon UBERON:0036291 myocardium of anterior wall of right ventricle UBERON:0036291 A mucosa that is part of a lip region [Automatically generated definition]. NCIT:C12226 labial mucosa uberon UBERON:0036294 mucosa of lip UBERON:0036294 A mucosa that is part of a lip region [Automatically generated definition]. OBOL:automatic labial mucosa UBERON:cjm uberon UBERON:0036302 vasculature of central nervous system plus retina UBERON:0036302 FMA:259905 uberon UBERON:0036303 vasculature of central nervous system UBERON:0036303 FMA:15089 brachiocephalic arterial wall uberon UBERON:0036351 wall of brachiocephalic artery UBERON:0036351 brachiocephalic arterial wall FMA:15089 FMA:15090 subclavian arterial wall uberon UBERON:0036352 wall of subclavian artery UBERON:0036352 subclavian arterial wall FMA:15090 FMA:18211 pulmonary arterial wall uberon UBERON:0036422 wall of pulmonary artery UBERON:0036422 pulmonary arterial wall FMA:18211 FMA:231590 uberon UBERON:0036553 wall of synovial tendon sheath UBERON:0036553 FMA:58098 eyeball wall uberon UBERON:0036925 wall of eyeball UBERON:0036925 eyeball wall FMA:58098 FMA:66284 common carotid arterial wall uberon UBERON:0037094 wall of common carotid artery UBERON:0037094 common carotid arterial wall FMA:66284 Wall of organ which has as its parts the endocardium, myocardium , epicardium, and the cardiac septum, surrounded by the pericardial sac proper and is continuous with the walls of the systemic and pulmonary arterial and venous trees. FMA:7274 cardiac wall uberon UBERON:0037144 wall of heart UBERON:0037144 Wall of organ which has as its parts the endocardium, myocardium , epicardium, and the cardiac septum, surrounded by the pericardial sac proper and is continuous with the walls of the systemic and pulmonary arterial and venous trees. FMA:7274 cardiac wall FMA:7274 Ovarian vein, each instance of which is a tributary of some inferior vena cava that drains the right pampiniform plexus of some broad ligament. FMA:14342 uberon UBERON:0039856 right ovarian vein UBERON:0039856 Ovarian vein, each instance of which is a tributary of some inferior vena cava that drains the right pampiniform plexus of some broad ligament. FMA:14342 Ovarian vein, each instance of which is a tributary of some left renal vein that drains the left pampiniform plexus of some broad ligament. FMA:14347 uberon UBERON:0039857 left ovarian vein UBERON:0039857 Ovarian vein, each instance of which is a tributary of some left renal vein that drains the left pampiniform plexus of some broad ligament. FMA:14347 A zone of skin that is part of the face. 2012-02-05T05:23:01Z EMAPA:36657 FMA:24758 NCIT:C33561 SCTID:361703006 face skin uberon facial skin UBERON:1000021 skin of face UBERON:1000021 A zone of skin that is part of the face. UBERON:EJS https://github.com/obophenotype/uberon/issues/34 face skin EMAPA:36657 FMA:24758 An anatomical junction between two parts of the digestive tract. 2021-02-05T11:19:31Z uberon UBERON:1100000 digestive tract junction UBERON:1100000 An anatomical junction between two parts of the digestive tract. https://orcid.org/0000-0002-7073-9172 EFO:0003612 TAO:0001053 ZFA:0001053 PICA primitive internal carotid artery uberon UBERON:2001053 future internal carotid artery UBERON:2001053 PICA TAO:0001053 primitive internal carotid artery ZFA:0001053 Cartilage which is part of the axial skeleton. ZFA:0001457 uberon UBERON:2001457 postcranial axial cartilage UBERON:2001457 Cartilage which is part of the axial skeleton. ZFIN:curator Capillary that has pores in the endothelial cells (60-80 nm in diameter) that are spanned by a diaphragm of radially oriented fibrils and allow small molecules and limited amounts of protein to diffuse. fenestrated blood vessel endothelium FMA:63196 NCIT:C32595 TAO:0005260 Wikipedia:Capillary#Types ZFA:0005260 fenestrated capillary vessel uberon UBERON:2005260 fenestrated capillary UBERON:2005260 Capillary that has pores in the endothelial cells (60-80 nm in diameter) that are spanned by a diaphragm of radially oriented fibrils and allow small molecules and limited amounts of protein to diffuse. Wikipedia:Capillary#Types Wikipedia:Fenestra_(histology) fenestrated blood vessel endothelium ZFA:0005260 fenestrated capillary vessel FMA:63196 Non neural ectoderm that surrounds the presumptive neural plate and gives rise to neurogenic placodes. ZFA:0007013 uberon UBERON:2007013 preplacodal ectoderm UBERON:2007013 Non neural ectoderm that surrounds the presumptive neural plate and gives rise to neurogenic placodes. ZFIN:curator Structures of the dermis, epidermis, glands and pigment cells recognizable on the external surfaces of the integument. uberon UBERON:3000961 Not clear how this differs from parent class. See https://github.com/obophenotype/uberon/issues/1305 external integument structure UBERON:3000961 Structures of the dermis, epidermis, glands and pigment cells recognizable on the external surfaces of the integument. AAO:EJS Dermal, epidermal, glandular and pigment structures of the external head integument. uberon UBERON:3000972 head external integument structure UBERON:3000972 Dermal, epidermal, glandular and pigment structures of the external head integument. AAO:EJS Dermal, epidermal, glandular and pigment structures of the body integument. uberon UBERON:3000977 body external integument structure UBERON:3000977 Dermal, epidermal, glandular and pigment structures of the body integument. AAO:EJS Blood vessels in respiratory skin. uberon UBERON:3010200 vasculature of respiratory integument UBERON:3010200 Blood vessels in respiratory skin. AAO:EJS Skeletal tissue that is mineralized. mineralized tissue VSAO:0000013 XAO:0004039 uberon UBERON:4000013 mineralized skeletal tissue UBERON:4000013 Skeletal tissue that is mineralized. XAO:0004039 XAO:EJS mineralized tissue VSAO:0000013 Extracellular matrix that is mineralized. uberon UBERON:4000020 mineralized extracellular matrix UBERON:4000020 Extracellular matrix that is mineralized. PSPUB:0000170 Bone tissue mineralized with hydroxyapatite. uberon UBERON:4000115 mineralized bone tissue UBERON:4000115 Bone tissue mineralized with hydroxyapatite. PSPUB:0000170 An anatomical surface that is part of a bone. bone surface uberon UBERON:4200230 surface of bone UBERON:4200230 An anatomical surface that is part of a bone. PHENOSCAPE uberon UBERON:6000004 panarthropod head UBERON:6000004 Left part of the organism dorsal to a horizontal plane and bounded on one side by the same transverse plane. uberon UBERON:8000006 left side of back UBERON:8000006 Left part of the organism dorsal to a horizontal plane and bounded on one side by the same transverse plane. https://microbiomedb.org/ Right part of the organism dorsal to a horizontal plane and bounded on one side by the same transverse plane. uberon UBERON:8000007 right side of back UBERON:8000007 Right part of the organism dorsal to a horizontal plane and bounded on one side by the same transverse plane. https://microbiomedb.org/ A collection of Purkinje fibers that receives signals from the right and left bundle branches and innervates the ventricular cardiac muscle. The Purkinje fiber network creates synchronized contractions of the heart ventricles. Purkinje fibre network uberon UBERON:8000009 Purkinje fiber network UBERON:8000009 A collection of Purkinje fibers that receives signals from the right and left bundle branches and innervates the ventricular cardiac muscle. The Purkinje fiber network creates synchronized contractions of the heart ventricles. PMID:26786210 Purkinje fibre network PMID:26786210 Any of the smallest blood vessels where blood circulates within organ tissues. Microvessels include terminal arterioles, metarterioles, capillaries, and venules (but exclude lymphatic capillaries). Arterioles carry oxygenated blood to the capillaries, and blood flows out of the capillaries through venules into veins. http://orcid.org/0000-0002-2825-0621 microvasculature microvessel uberon UBERON:8410081 blood microvessel UBERON:8410081 Any of the smallest blood vessels where blood circulates within organ tissues. Microvessels include terminal arterioles, metarterioles, capillaries, and venules (but exclude lymphatic capillaries). Arterioles carry oxygenated blood to the capillaries, and blood flows out of the capillaries through venules into veins. Wikipedia:Microcirculation http://orcid.org/0000-0002-7073-9172 One or a subset of adjacent layers of the neocortex. uberon UBERON:8440004 laminar subdivision of the cortex UBERON:8440004 One or a subset of adjacent layers of the neocortex. ISBN-10:0-87893-742-0 Collections of neurons in the central nervous system that have been demonstrated by histochemical fluorescence to contain the neurotransmitter norepinephrine (noradrenalin). uberon UBERON:8440015 noradrenergic cell groups UBERON:8440015 Collections of neurons in the central nervous system that have been demonstrated by histochemical fluorescence to contain the neurotransmitter norepinephrine (noradrenalin). WikipediaVersioned:Noradrenergic_cell_groups&oldid=965992184 An anatomical system that eliminates waste products that arise as a result of metabolic activity. http://orcid.org/0000-0002-6095-8718 2022-05-25T18:21:29Z uberon UBERON:8450002 excretory system UBERON:8450002 An anatomical system that eliminates waste products that arise as a result of metabolic activity. GO:0007588 A craniocervical region that is part of an embryo. 2024-09-12T14:40:00Z uberon UBERON:8450003 embryonic craniocervical region UBERON:8450003 A craniocervical region that is part of an embryo. https://orcid.org/0000-0002-6095-8718 A capillary that is part of the brain. 2022-06-24T09:28:31Z uberon UBERON:8480001 capillary of brain UBERON:8480001 A capillary that is part of the brain. https://orcid.org/0000-0002-0819-0473 A portion of smooth muscle tissue that is part of the thoracic aorta. 2022-06-24T09:30:54Z uberon UBERON:8480002 thoracic aorta smooth muscle tissue UBERON:8480002 A portion of smooth muscle tissue that is part of the thoracic aorta. https://orcid.org/0000-0002-0819-0473 A zone of skin that is above the clavicle zone in the pectoral girdle region. 2022-08-29T14:17:12Z uberon UBERON:8480025 skin of clavicle region UBERON:8480025 A zone of skin that is above the clavicle zone in the pectoral girdle region. https://orcid.org/0000-0002-0819-0473 A zone of skin that is part of the external genitalia. 2022-08-30T06:55:06Z uberon UBERON:8480029 skin of external genitalia UBERON:8480029 A zone of skin that is part of the external genitalia. https://orcid.org/0000-0002-0819-0473 A zone of skin part of some gonad. 2023-08-29T10:24:24Z uberon UBERON:8480074 skin of gonad UBERON:8480074 A zone of skin part of some gonad. https://orcid.org/0000-0002-0819-0473 A muscle tissue that is associated with soft internal organs (viscera). 2023-02-16T10:17:46Z visceral muscle uberon UBERON:8600004 It is quite common to refer to visceral muscles as smooth muscles, by analogy with vertebrates; however, most visceral muscles in arthropods are actually striated. visceral muscle tissue UBERON:8600004 A muscle tissue that is associated with soft internal organs (viscera). BTO:0002780 CLAO:0001295 visceral muscle BTO:0002780 It is quite common to refer to visceral muscles as smooth muscles, by analogy with vertebrates; however, most visceral muscles in arthropods are actually striated. FBbt:00005070 https://en.wikipedia.org/wiki/Smooth_muscle PMID:8720463 A striated muscle tissue that is associated with soft internal organs (viscera). 2023-02-16T10:34:43Z striated visceral muscle tissue uberon UBERON:8600006 visceral striated muscle tissue UBERON:8600006 A striated muscle tissue that is associated with soft internal organs (viscera). PMID:8720463 https://pressbooks.pub/rbtallitsch/chapter/chapter-6-muscle-tissue/ A venule that is part of a lung and drains oxygenated blood from pulmonary capillaries. A pulmonary venule merges into a pulmonary vein branch that runs in the pulmonary interlobular septa. 2023-10-24T11:26:27Z uberon UBERON:8600024 pulmonary venule UBERON:8600024 A venule that is part of a lung and drains oxygenated blood from pulmonary capillaries. A pulmonary venule merges into a pulmonary vein branch that runs in the pulmonary interlobular septa. PMID:22283705 PMID:30247823 A parasympathetic ganglion that is located within the airway walls of the lower respiratory tract. This ganglion is responsible for controlling the constriction of the airway by stimulating smooth muscle contraction in the lower respiratory tract to regulate airflow. 2025-02-24T14:15:29Z ILX:0793573 lower airway parasympathetic ganglion uberon UBERON:8600123 lower airway ganglion UBERON:8600123 A parasympathetic ganglion that is located within the airway walls of the lower respiratory tract. This ganglion is responsible for controlling the constriction of the airway by stimulating smooth muscle contraction in the lower respiratory tract to regulate airflow. ILX:0793573 PMID:35965034 doi:10.1016/B978-008045046-9.00635-5 lower airway parasympathetic ganglion ILX:0793573 2025-05-14 a core relation that holds between a whole and its part BFO:0000051 quality has_part has_part has part has_part x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point. preceded by x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point. precedes b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t Paraphrase of definition: a relation between a process and an independent continuant, in which the process takes place entirely within the independent continuant occurs in [copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t Paraphrase of definition: a relation between an independent continuant and a process, in which the process takes place entirely within the independent continuant contains process lacks_part lacks_plasma_membrane_part GOREL:0002003 external results_in_distribution_of results_in_distribution_of results in distribution of results_in_distribution_of GOREL:0002004 external results_in_fission_of results_in_fission_of results in fission of results_in_fission_of a relation between a specifically dependent continuant (the characteristic) and any other entity (the bearer), in which the characteristic depends on the bearer for its existence. Note that this relation was previously called "inheres in", but was changed to be called "characteristic of" because BFO2 uses "inheres in" in a more restricted fashion. This relation differs from BFO2:inheres_in in two respects: (1) it does not impose a range constraint, and thus it allows qualities of processes, as well as of information entities, whereas BFO2 restricts inheres_in to only apply to independent continuants (2) it is declared functional, i.e. something can only be a characteristic of one thing. characteristic of Inverse of characteristic_of has characteristic a relation between a continuant and a process, in which the continuant is somehow involved in the process participates in a relation between a process and a continuant, in which the continuant is somehow involved in the process RO:0000057 has_participant has_participant has participant a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence has quality a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence has role a relation between two independent continuants, the location and the target, in which the target is entirely within the location location of a relation between two independent continuants, the target and the location, in which the target is entirely within the location located in a relation between a material entity and a 2D immaterial entity (the boundary), in which the boundary delimits the material entity has 2D boundary innervated_by X outer_layer_of Y iff: . X :continuant that bearer_of some PATO:laminar . X part_of Y . exists Z :surface . X has_boundary Z . Z boundary_of Y has_boundary: http://purl.obolibrary.org/obo/RO_0002002 boundary_of: http://purl.obolibrary.org/obo/RO_0002000 A relationship that applies between a continuant and its outer, bounding layer. Examples include the relationship between a multicellular organism and its integument, between an animal cell and its plasma membrane, and between a membrane bound organelle and its outer/bounding membrane. bounding layer of x simultaneous with y iff ω(x) = ω(y) and ω(α ) = ω(α), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point and '=' indicates the same instance in time. t1 simultaneous_with t2 iff:= t1 before_or_simultaneous_with t2 and not (t1 before t2) simultaneous with X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y) immediately preceded by Relation between a neuron and a material anatomical entity that its soma is part of. has soma location Relation between an anatomical structure (including cells) and a neuron that chemically synapses to it. synapsed by Holds between a cell c and a protein complex or protein p if and only if that cell has as part a plasma_membrane[GO:0005886], and that plasma membrane has p as part. has plasma membrane part Relation between a neuron and an anatomical structure (including cells) that it chemically synapses to. N1 synapsed_to some N2 Expands to: N1 SubclassOf ( has_part some ( ‘pre-synaptic membrane ; GO:0042734’ that part_of some ( ‘synapse ; GO:0045202’ that has_part some ( ‘post-synaptic membrane ; GO:0045211’ that part_of some N2)))) synapsed to x overlaps y if and only if there exists some z such that x has part z and z part of y overlaps Relation between a 'neuron projection bundle' and a region in which one or more of its component neuron projections either synapses to targets or receives synaptic input. T innervates some R Expands_to: T has_fasciculating_neuron_projection that synapse_in some R. innervates X continuous_with Y if and only if X and Y share a fiat boundary. continuous with x only in taxon y if and only if x is in taxon y, and there is no other organism z such that y!=z a and x is in taxon z. only in taxon x is in taxon y if an only if y is an organism, and the relationship between x and y is one of: part of (reflexive), developmentally preceded by, derives from, secreted by, expressed. life cycle stage of Connects a biological entity to its taxon of origin. in taxon a is connected to b if and only if a and b are discrete structure, and there exists some connecting structure c, such that c connects a and b connected to c connects a if and only if there exist some b such that a and b are similar parts of the same system, and c connects b, specifically, c connects a with b. When one structure connects two others it unites some aspect of the function or role they play within the system. connects a is attached to part of b if a is attached to b, or a is attached to some p, where p is part of b. attached to part of inverse of develops from develops into Candidate definition: x directly_develops from y if and only if there exists some developmental process (GO:0032502) p such that x and y both participate in p, and x is the output of p and y is the input of p, and a substantial portion of the matter of x comes from y, and the start of x is coincident with or after the end of y. has developmental precursor TODO - add child relations from DOS directly develops from p regulates q iff p is causally upstream of q, the execution of p is not constant and varies according to specific conditions, and p influences the rate or magnitude of execution of q due to an effect either on some enabler of q or some enabler of a part of q. regulates p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q. negatively regulates p positively regulates q iff p regulates q, and p increases the rate or magnitude of execution of q. positively regulates A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. capable of c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p. capable of part of x surrounded_by y if and only if (1) x is adjacent to y and for every region r that is adjacent to x, r overlaps y (2) the shared boundary between x and y occupies the majority of the outermost boundary of x surrounded by x adjacent to y if and only if x and y share a boundary. adjacent to inverse of surrounded by surrounds inverse of starts with starts x starts with y if and only if x has part y and the time point at which x starts is equivalent to the time point at which y starts. Formally: α(y) = α(x) ∧ ω(y) < ω(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point. starts with inverse of ends with ends x ends with y if and only if x has part y and the time point at which x ends is equivalent to the time point at which y ends. Formally: α(y) > α(x) ∧ ω(y) = ω(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point. ends with x 'has starts location' y if and only if there exists some process z such that x 'starts with' z and z 'occurs in' y has start location x 'has end location' y if and only if there exists some process z such that x 'ends with' z and z 'occurs in' y has end location b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t. connecting branch of x has developmental contribution from y iff x has some part z such that z develops from y has developmental contribution from t1 induced_by t2 if there is a process of developmental induction (GO:0031128) with t1 and t2 as interacting participants. t2 causes t1 to change its fate from a precursor material anatomical entity type T to T', where T' develops_from T developmentally induced by x developmentally replaces y if and only if there is some developmental process that causes x to move or to cease to exist, and for the site that was occupied by x to become occupied by y, where y either comes into existence in this site or moves to this site from somewhere else developmentally replaces p results in the developmental progression of s iff p is a developmental process and s is an anatomical entity and p causes s to undergo a change in state at some point along its natural developmental cycle (this cycle starts with its formation, through the mature structure, and ends with its loss). results in developmental progression of p 'results in development of' c if and only if p is a developmental process and p results in the state of c changing from its initial state as a primordium or anlage through its mature state and to its final state. results in development of results in formation of anatomical entity The relationship that links an entity with the process that results in the formation and shaping of that entity over time from an immature to a mature state. results in morphogenesis of The relationship that links an entity with a process that results in the progression of the entity over time that is independent of changes in it's shape and results in an end point state of that entity. results in maturation of The relationship that links a specified entity with the process that results in an unspecified entity acquiring the features and characteristics of the specified entity results in acquisition of features of A grouping relationship for any relationship directly involving a function, or that holds because of a function of one of the related entities. functionally related to This relationship holds between p and l when p is a transport or localization process in which the outcome is to move some cargo c from some initial location l to some destination. has target start location This relationship holds between p and l when p is a transport or localization process in which the outcome is to move some cargo c from a an initial location to some destination l. has target end location Holds between p and l when p is a transportation or localization process and the outcome of this process is to move c from one location to another, and the route taken by c follows a path that is aligned_with l results in transport along Holds between p and m when p is a transportation or localization process and the outcome of this process is to move c from one location to another, and the route taken by c follows a path that crosses m. results in transport across results in growth of results in transport to from or in has member is a mereological relation between a collection and an item. has member inverse of has output output of a is attached to b if and only if a and b are discrete objects or object parts, and there are physical connections between a and b such that a force pulling a will move b, or a force pulling b will move a attached to m has_muscle_origin s iff m is attached_to s, and it is the case that when m contracts, s does not move. The site of the origin tends to be more proximal and have greater mass than what the other end attaches to. has muscle origin m has_muscle_insertion s iff m is attaches_to s, and it is the case that when m contracts, s moves. Insertions are usually connections of muscle via tendon to bone. has muscle insertion x tributary_of y if and only if x a channel for the flow of a substance into y, where y is larger than x. If x and y are hydrographic features, then y is the main stem of a river, or a lake or bay, but not the sea or ocean. If x and y are anatomical, then y is a vein. tributary of x is a branching part of y if and only if x is part of y and x is connected directly or indirectly to the main stem of y branching part of x has potential to developmentrally contribute to y iff x developmentally contributes to y or x is capable of developmentally contributing to y has potential to developmentally contribute to x has the potential to develop into y iff x develops into y or if x is capable of developing into y This relation has a stronger meaning than merely indicating that X may develop into Y, in that the capability of developing into Y is always present, even if X does not always actually develop into Y. In particular, this means that if Y is restricted to a given taxon T, X is necessarily likewise restricted. has potential to develop into p contributes to morphology of w if and only if a change in the morphology of p entails a change in the morphology of w. Examples: every skull contributes to morphology of the head which it is a part of. Counter-example: nuclei do not generally contribute to the morphology of the cell they are part of, as they are buffered by cytoplasm. contributes to morphology of x composed_primarily_of y if and only if more than half of the mass of x is made from y or units of the same type as y. composed primarily of x existence starts during y if and only if the time point at which x starts is after or equivalent to the time point at which y starts and before or equivalent to the time point at which y ends. Formally: x existence starts during y iff α(x) >= α(y) & α(x) <= ω(y). existence starts during x starts ends with y if and only if the time point at which x starts is equivalent to the time point at which y starts. Formally: x existence starts with y iff α(x) = α(y). existence starts with x exists during y if and only if: 1) the time point at which x begins to exist is after or equal to the time point at which y begins and 2) the time point at which x ceases to exist is before or equal to the point at which y ends. Formally: x existence starts and ends during y iff α(x) >= α(y) & α(x) <= ω(y) & ω(x) <= ω(y) & ω(x) >= α(y) exists during The relations here were created based on work originally by Fabian Neuhaus and David Osumi-Sutherland. The work has not yet been vetted and errors in definitions may have occurred during transcription. existence starts and ends during x existence ends during y if and only if the time point at which x ends is before or equivalent to the time point at which y ends and after or equivalent to the point at which y starts. Formally: x existence ends during y iff ω(x) <= ω(y) and ω(x) >= α(y). The relations here were created based on work originally by Fabian Neuhaus and David Osumi-Sutherland. The work has not yet been vetted and errors in definitions may have occurred during transcription. existence ends during x existence ends with y if and only if the time point at which x ends is equivalent to the time point at which y ends. Formally: x existence ends with y iff ω(x) = ω(y). The relations here were created based on work originally by Fabian Neuhaus and David Osumi-Sutherland. The work has not yet been vetted and errors in definitions may have occurred during transcription. existence ends with x transformation of y if x is the immediate transformation of y, or is linked to y through a chain of transformation relationships transformation of x immediate transformation of y iff x immediately succeeds y temporally at a time boundary t, and all of the matter present in x at t is present in y at t, and all the matter in y at t is present in x at t immediate transformation of x existence starts during or after y if and only if the time point at which x starts is after or equivalent to the time point at which y starts. Formally: x existence starts during or after y iff α (x) >= α (y). The relations here were created based on work originally by Fabian Neuhaus and David Osumi-Sutherland. The work has not yet been vetted and errors in definitions may have occurred during transcription. existence starts during or after x existence ends during or before y if and only if the time point at which x ends is before or equivalent to the time point at which y ends. The relations here were created based on work originally by Fabian Neuhaus and David Osumi-Sutherland. The work has not yet been vetted and errors in definitions may have occurred during transcription. existence ends during or before q towards e2 if and only if q is a relational quality such that q inheres-in some e, and e != e2 and q is dependent on e2 towards A relation between a segment or subdivision of an organism and the maximal subdivision of material entities that provides structural support for that segment or subdivision. has skeleton Holds between p and c when p is locomotion process and the outcome of this process is the change of location of c results in movement of x is a conduit for y iff y overlaps through the lumen_of of x, and y has parts on either side of the lumen of x. conduit for s is luminal space of x iff s is lumen_of x and s is an immaterial entity luminal space of inverse of has skeleton skeleton of results in assembly of results in disassembly of p results in organization of c iff p results in the assembly, arrangement of constituent parts, or disassembly of c results in organization of Inverse of 'causal agent in process' process has causal agent A relationship that holds between two entities, where the entities exhibit a statistical dependence relationship. The entities may be statistical variables, or they may be other kinds of entities such as diseases, chemical entities or processes. correlated with a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix. Note that this definition doesn't quite distinguish the output of a transformation process from a production process, which is related to the identity/granularity issue. produces a produced_by b iff some process that occurs_in b has_output a. produced by p 'has primary input ot output' c iff either (a) p 'has primary input' c or (b) p 'has primary output' c. 2018-12-13T11:26:17Z has primary input or output p has primary output c if (a) p has output c and (b) the goal of process is to modify, produce, or transform c. 2018-12-13T11:26:32Z has primary output p has primary output c if (a) p has output c and (b) the goal of process is to modify, produce, or transform c. GOC:dph GOC:kva GOC:pt PMID:27812932 p has primary input c if (a) p has input c and (b) the goal of process is to modify, consume, or transform c. 2018-12-13T11:26:56Z has primary input p has primary input c if (a) p has input c and (b) the goal of process is to modify, consume, or transform c. GOC:dph GOC:kva GOC:pt PMID:27812932 p acts on population of c iff c' is a collection, has members of type c, and p has participant c 2020-06-08T17:21:33Z acts on population of 2021-02-26T07:28:29Z results in fusion of A relation that applies between a cell type and a set of markers that can be used to uniquely identify that cell type. has marker gene combination has marker signature set has characterizing marker set q1 increased_in_magnitude_relative_to q2 if and only if magnitude(q1) > magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. This relation is used to determine the 'directionality' of relative qualities such as 'increased strength', relative to the parent type, 'strength'. increased in magnitude relative to q1 increased_in_magnitude_relative_to q2 if and only if magnitude(q1) > magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. https://orcid.org/0000-0002-6601-2165 q1 decreased_in_magnitude_relative_to q2 if and only if magnitude(q1) < magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. This relation is used to determine the 'directionality' of relative qualities such as 'decreased strength', relative to the parent type, 'strength'. decreased in magnitude relative to q1 decreased_in_magnitude_relative_to q2 if and only if magnitude(q1) < magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. https://orcid.org/0000-0002-6601-2165 has relative magnitude s3 has_cross_section s3 if and only if : there exists some 2d plane that intersects the bearer of s3, and the impression of s3 upon that plane has shape quality s2. Example: a spherical object has the quality of being spherical, and the spherical quality has_cross_section round. has cross section s3 has_cross_section s3 if and only if : there exists some 2d plane that intersects the bearer of s3, and the impression of s3 upon that plane has shape quality s2. https://orcid.org/0000-0002-6601-2165 q1 reciprocal_of q2 if and only if : q1 and q2 are relational qualities and a phenotype e q1 e2 mutually implies a phenotype e2 q2 e. There are frequently two ways to state the same thing: we can say 'spermatocyte lacks asters' or 'asters absent from spermatocyte'. In this case the quality is 'lacking all parts of type' - it is a (relational) quality of the spermatocyte, and it is with respect to instances of 'aster'. One of the popular requirements of PATO is that it continue to support 'absent', so we need to relate statements which use this quality to the 'lacking all parts of type' quality. reciprocal of q1 reciprocal_of q2 if and only if : q1 and q2 are relational qualities and a phenotype e q1 e2 mutually implies a phenotype e2 q2 e. https://orcid.org/0000-0002-6601-2165 x vessel supplies blood to y if and only if x is a vessel that supplies blood directly or indirectly to an anatomical structure y. 2024-02-01T10:09:22Z vessel supplies blood to x vessel drains blood from y if and only if x is a vessel that drains blood directly or indirectly from an anatomical structure y. 2024-02-01T10:09:41Z vessel drains blood from An ontology of phenotypic qualities (properties, attributes or characteristics). PATO - the Phenotype And Trait Ontology quality 1.2 2025-05-14 x anteriorly_connected_to y iff the anterior part of x is connected to y. i.e. x connected_to y and x posterior_to y. uberon anteriorly_connected_to anteriorly connected to x anteriorly_connected_to y iff the anterior part of x is connected to y. i.e. x connected_to y and x posterior_to y. http://purl.obolibrary.org/obo/uberon/docs/Connectivity-Design-Pattern carries uberon channel_for channel for uberon channels_from channels_from uberon channels_into channels_into X extends_fibers into Y iff there exists some neuron (N) and N has_soma_location X and N 'has synaptic IO in region' some Y uberon extends_fibers_into extends_fibers_into X extends_fibers into Y iff there exists some neuron (N) and N has_soma_location X and N 'has synaptic IO in region' some Y https://orcid.org/0000-0002-7073-9172 Relationship between a fluid and a material entity, where the fluid is the output of a realization of a filtration role that inheres in the material entity. uberon filtered_through Relationship between a fluid and a filtration barrier, where the portion of fluid arises as a transformation of another portion of fluid on the other side of the barrier, with larger particles removed filtered through x posteriorly_connected_to y iff the posterior part of x is connected to y. i.e. x connected_to y and x anterior_to y. uberon posteriorly_connected_to posteriorly connected to x posteriorly_connected_to y iff the posterior part of x is connected to y. i.e. x connected_to y and x anterior_to y. http://purl.obolibrary.org/obo/uberon/docs/Connectivity-Design-Pattern uberon protects protects x proximally_connected_to y iff the proximal part of x is connected to y. i.e. x connected_to y and x distal_to y. uberon proximally_connected_to proximally connected to x proximally_connected_to y iff the proximal part of x is connected to y. i.e. x connected_to y and x distal_to y. http://purl.obolibrary.org/obo/uberon/docs/Connectivity-Design-Pattern c site_of p if c is the bearer of a disposition that is realized by a process that has p as part. uberon capable_of_has_part site_of site_of uberon subdivision_of placeholder relation. X = 'subdivision of A' and subdivision_of some B means that X is the mereological sum of A and B subdivision of 2 2 1 2