SARSMutOnto is an ontology that describes the SARS-CoV2 genome structure by detailing its component genes. It also describes all the variants listed by the researchers while keeping the hierarchical relationship (variant / sub-variant) between the variants owl:Thing A A.1 A.11 A.12 A.15 A.16 A.17 A.18 A.19 A.2 A.2.2 A.2.3 A.2.4 A.2.5 A.2.5.1 A.2.5.2 A.2.5.3 A.21 A.22 A.23 A.23.1 A.24 A.25 A.26 A.27 A.28 A.29 A.3 A.30 A.4 A.5 A.6 A.7 A.9 AA.1 AA.2 AA.3 AA.4 AA.5 AA.6 AA.7 AA.8 AB.1 AC.1 AD.1 AD.2 AD.2.1 AE.1 AE.2 AE.3 AE.4 AE.5 AE.6 AE.7 AE.8 AF.1 AG.1 AH.1 AH.2 AH.3 AJ.1 AK.1 AK.2 AL.1 AM.1 AM.2 AM.3 AM.4 AN.1 AP.1 AQ.1 AQ.2 AS.1 AS.2 AT.1 AU.1 AU.2 AU.3 AV.1 AW.1 AY.1 AY.10 AY.100 AY.101 AY.102 AY.102.1 AY.102.2 AY.103 AY.103.1 AY.103.2 AY.104 AY.105 AY.106 AY.107 AY.108 AY.109 AY.11 AY.110 AY.111 AY.112 AY.112.1 AY.112.2 AY.112.3 AY.113 AY.114 AY.116 AY.116.1 AY.117 AY.118 AY.119 AY.119.1 AY.119.2 AY.120 AY.120.1 AY.120.2 AY.120.2.1 AY.121 AY.121.1 AY.122 AY.122.1 AY.122.2 AY.122.3 AY.122.4 AY.122.5 AY.122.6 AY.123 AY.123.1 AY.124 AY.124.1 AY.124.1.1 AY.125 AY.125.1 AY.126 AY.127 AY.127.1 AY.127.2 AY.127.3 AY.128 AY.129 AY.13 AY.130 AY.131 AY.132 AY.133 AY.134 AY.14 AY.15 AY.16 AY.16.1 AY.17 AY.18 AY.19 AY.2 AY.20 AY.20.1 AY.21 AY.22 AY.23 AY.23.1 AY.23.2 AY.24 AY.24.1 AY.25 AY.25.1 AY.25.1.1 AY.25.1.2 AY.25.2 AY.25.3 AY.26 AY.26.1 AY.27 AY.28 AY.29 AY.29.1 AY.29.2 AY.3 AY.3.1 AY.3.2 AY.3.3 AY.3.4 AY.30 AY.31 AY.32 AY.33 AY.33.1 AY.33.2 AY.34 AY.34.1 AY.34.1.1 AY.34.2 AY.35 AY.36 AY.36.1 AY.37 AY.38 AY.39 AY.39.1 AY.39.1.1 AY.39.1.2 AY.39.1.3 AY.39.1.4 AY.39.2 AY.39.3 AY.4 AY.4.1 AY.4.10 AY.4.11 AY.4.12 AY.4.13 AY.4.14 AY.4.15 AY.4.16 AY.4.17 AY.4.2 AY.4.2.1 AY.4.2.2 AY.4.2.3 AY.4.2.4 AY.4.2.5 AY.4.3 AY.4.4 AY.4.5 AY.4.6 AY.4.7 AY.4.8 AY.4.9 AY.40 AY.41 AY.42 AY.42.1 AY.43 AY.43.1 AY.43.2 AY.43.3 AY.43.4 AY.43.5 AY.43.6 AY.43.7 AY.43.8 AY.43.9 AY.44 AY.45 AY.46 AY.46.1 AY.46.2 AY.46.3 AY.46.4 AY.46.5 AY.46.6 AY.46.6.1 AY.47 AY.48 AY.49 AY.5 AY.5.1 AY.5.2 AY.5.3 AY.5.4 AY.5.5 AY.5.6 AY.5.7 AY.50 AY.51 AY.52 AY.53 AY.54 AY.55 AY.56 AY.57 AY.58 AY.59 AY.6 AY.60 AY.61 AY.62 AY.63 AY.64 AY.65 AY.66 AY.67 AY.68 AY.69 AY.7 AY.7.1 AY.7.2 AY.70 AY.71 AY.72 AY.73 AY.74 AY.75 AY.75.2 AY.75.3 AY.76 AY.77 AY.78 AY.79 AY.8 AY.80 AY.81 AY.82 AY.83 AY.84 AY.85 AY.86 AY.87 AY.88 AY.9 AY.9.2 AY.9.2.1 AY.9.2.2 AY.90 AY.91 AY.91.1 AY.92 AY.93 AY.94 AY.95 AY.98 AY.98.1 AY.98.1.1 AY.99 AY.99.1 AY.99.2 AZ.1 AZ.2 AZ.2.1 AZ.3 AZ.4 AZ.5 AZ.6 B B.1 B.1.1 B.1.1.1 B.1.1.10 B.1.1.100 B.1.1.101 B.1.1.107 B.1.1.109 B.1.1.110 B.1.1.111 B.1.1.112 B.1.1.113 B.1.1.114 B.1.1.115 B.1.1.116 B.1.1.117 B.1.1.118 B.1.1.119 B.1.1.12 B.1.1.120 B.1.1.121 B.1.1.122 B.1.1.123 B.1.1.125 B.1.1.127 B.1.1.128 B.1.1.129 B.1.1.13 B.1.1.130 B.1.1.132 B.1.1.133 B.1.1.134 B.1.1.135 B.1.1.136 B.1.1.137 B.1.1.138 B.1.1.139 B.1.1.14 B.1.1.141 B.1.1.142 B.1.1.144 B.1.1.145 B.1.1.147 B.1.1.148 B.1.1.149 B.1.1.15 B.1.1.152 B.1.1.153 B.1.1.154 B.1.1.155 B.1.1.157 B.1.1.158 B.1.1.159 B.1.1.16 B.1.1.160 B.1.1.161 B.1.1.162 B.1.1.163 B.1.1.164 B.1.1.165 B.1.1.166 B.1.1.168 B.1.1.169 B.1.1.17 B.1.1.170 B.1.1.171 B.1.1.172 B.1.1.174 B.1.1.175 B.1.1.176 B.1.1.177 B.1.1.178 B.1.1.180 B.1.1.181 B.1.1.182 B.1.1.184 B.1.1.185 B.1.1.186 B.1.1.187 B.1.1.189 B.1.1.190 B.1.1.191 B.1.1.192 B.1.1.193 B.1.1.194 B.1.1.196 B.1.1.197 B.1.1.198 B.1.1.200 B.1.1.201 B.1.1.202 B.1.1.203 B.1.1.204 B.1.1.205 B.1.1.207 B.1.1.208 B.1.1.209 B.1.1.210 B.1.1.213 B.1.1.214 B.1.1.216 B.1.1.217 B.1.1.218 B.1.1.219 B.1.1.220 B.1.1.221 B.1.1.222 B.1.1.224 B.1.1.225 B.1.1.226 B.1.1.227 B.1.1.228 B.1.1.231 B.1.1.232 B.1.1.234 B.1.1.236 B.1.1.237 B.1.1.239 B.1.1.240 B.1.1.241 B.1.1.242 B.1.1.243 B.1.1.244 B.1.1.249 B.1.1.25 B.1.1.251 B.1.1.253 B.1.1.254 B.1.1.255 B.1.1.256 B.1.1.257 B.1.1.258 B.1.1.26 B.1.1.261 B.1.1.262 B.1.1.263 B.1.1.265 B.1.1.266 B.1.1.267 B.1.1.268 B.1.1.269 B.1.1.27 B.1.1.270 B.1.1.271 B.1.1.272 B.1.1.273 B.1.1.274 B.1.1.275 B.1.1.277 B.1.1.279 B.1.1.28 B.1.1.280 B.1.1.282 B.1.1.283 B.1.1.284 B.1.1.285 B.1.1.286 B.1.1.288 B.1.1.289 B.1.1.29 B.1.1.290 B.1.1.291 B.1.1.294 B.1.1.296 B.1.1.297 B.1.1.298 B.1.1.299 B.1.1.3 B.1.1.30 B.1.1.300 B.1.1.301 B.1.1.302 B.1.1.303 B.1.1.304 B.1.1.305 B.1.1.306 B.1.1.307 B.1.1.308 B.1.1.309 B.1.1.31 B.1.1.310 B.1.1.311 B.1.1.312 B.1.1.315 B.1.1.316 B.1.1.317 B.1.1.318 B.1.1.319 B.1.1.320 B.1.1.322 B.1.1.323 B.1.1.324 B.1.1.325 B.1.1.326 B.1.1.327 B.1.1.328 B.1.1.329 B.1.1.33 B.1.1.330 B.1.1.331 B.1.1.332 B.1.1.333 B.1.1.334 B.1.1.335 B.1.1.336 B.1.1.337 B.1.1.338 B.1.1.339 B.1.1.34 B.1.1.340 B.1.1.341 B.1.1.342 B.1.1.343 B.1.1.344 B.1.1.345 B.1.1.346 B.1.1.347 B.1.1.348 B.1.1.349 B.1.1.350 B.1.1.351 B.1.1.352 B.1.1.353 B.1.1.354 B.1.1.355 B.1.1.356 B.1.1.357 B.1.1.358 B.1.1.359 B.1.1.360 B.1.1.361 B.1.1.362 B.1.1.363 B.1.1.364 B.1.1.365 B.1.1.366 B.1.1.367 B.1.1.368 B.1.1.369 B.1.1.37 B.1.1.370 B.1.1.371 B.1.1.372 B.1.1.373 B.1.1.374 B.1.1.375 B.1.1.376 B.1.1.377 B.1.1.378 B.1.1.379 B.1.1.38 B.1.1.380 B.1.1.381 B.1.1.382 B.1.1.383 B.1.1.384 B.1.1.385 B.1.1.386 B.1.1.387 B.1.1.388 B.1.1.389 B.1.1.39 B.1.1.391 B.1.1.392 B.1.1.393 B.1.1.394 B.1.1.395 B.1.1.396 B.1.1.397 B.1.1.398 B.1.1.399 B.1.1.4 B.1.1.40 B.1.1.400 B.1.1.401 B.1.1.402 B.1.1.403 B.1.1.404 B.1.1.405 B.1.1.406 B.1.1.407 B.1.1.408 B.1.1.409 B.1.1.41 B.1.1.410 B.1.1.411 B.1.1.412 B.1.1.413 B.1.1.414 B.1.1.415 B.1.1.416 B.1.1.417 B.1.1.418 B.1.1.419 B.1.1.420 B.1.1.421 B.1.1.422 B.1.1.423 B.1.1.424 B.1.1.425 B.1.1.426 B.1.1.427 B.1.1.428 B.1.1.429 B.1.1.43 B.1.1.430 B.1.1.431 B.1.1.432 B.1.1.433 B.1.1.434 B.1.1.435 B.1.1.436 B.1.1.437 B.1.1.438 B.1.1.44 B.1.1.440 B.1.1.441 B.1.1.442 B.1.1.444 B.1.1.445 B.1.1.446 B.1.1.447 B.1.1.448 B.1.1.449 B.1.1.45 B.1.1.450 B.1.1.451 B.1.1.452 B.1.1.453 B.1.1.456 B.1.1.458 B.1.1.459 B.1.1.46 B.1.1.461 B.1.1.462 B.1.1.463 B.1.1.464 B.1.1.465 B.1.1.466 B.1.1.467 B.1.1.47 B.1.1.48 B.1.1.480 B.1.1.481 B.1.1.482 B.1.1.483 B.1.1.484 B.1.1.485 B.1.1.486 B.1.1.487 B.1.1.49 B.1.1.5 B.1.1.50 B.1.1.500 B.1.1.506 B.1.1.507 B.1.1.51 B.1.1.512 B.1.1.513 B.1.1.514 B.1.1.515 B.1.1.516 B.1.1.517 B.1.1.518 B.1.1.519 B.1.1.52 B.1.1.521 B.1.1.522 B.1.1.523 B.1.1.524 B.1.1.525 B.1.1.526 B.1.1.528 B.1.1.529 B.1.1.53 B.1.1.54 B.1.1.55 B.1.1.56 B.1.1.57 B.1.1.58 B.1.1.59 B.1.1.61 B.1.1.62 B.1.1.63 B.1.1.67 B.1.1.7 B.1.1.70 B.1.1.71 B.1.1.72 B.1.1.74 B.1.1.75 B.1.1.77 B.1.1.8 B.1.1.82 B.1.1.83 B.1.1.84 B.1.1.86 B.1.1.87 B.1.1.88 B.1.1.89 B.1.1.90 B.1.1.91 B.1.1.92 B.1.1.93 B.1.1.95 B.1.1.97 B.1.1.98 B.1.1.99 B.1.103 B.1.104 B.1.105 B.1.106 B.1.108 B.1.110 B.1.110.1 B.1.110.2 B.1.110.3 B.1.111 B.1.112 B.1.113 B.1.115 B.1.116 B.1.117 B.1.118 B.1.119 B.1.12 B.1.120 B.1.124 B.1.126 B.1.127 B.1.128 B.1.13 B.1.131 B.1.134 B.1.137 B.1.139 B.1.14 B.1.140 B.1.142 B.1.143 B.1.145 B.1.146 B.1.147 B.1.149 B.1.151 B.1.153 B.1.157 B.1.158 B.1.159 B.1.160 B.1.160.10 B.1.160.11 B.1.160.12 B.1.160.13 B.1.160.14 B.1.160.15 B.1.160.16 B.1.160.17 B.1.160.18 B.1.160.19 B.1.160.20 B.1.160.21 B.1.160.22 B.1.160.23 B.1.160.24 B.1.160.25 B.1.160.26 B.1.160.27 B.1.160.28 B.1.160.29 B.1.160.30 B.1.160.31 B.1.160.32 B.1.160.33 B.1.160.7 B.1.160.8 B.1.160.9 B.1.161 B.1.162 B.1.163 B.1.164 B.1.165 B.1.166 B.1.167 B.1.168 B.1.169 B.1.170 B.1.173 B.1.177 B.1.177.10 B.1.177.11 B.1.177.12 B.1.177.14 B.1.177.15 B.1.177.16 B.1.177.17 B.1.177.18 B.1.177.19 B.1.177.2 B.1.177.20 B.1.177.21 B.1.177.23 B.1.177.24 B.1.177.25 B.1.177.26 B.1.177.27 B.1.177.28 B.1.177.29 B.1.177.3 B.1.177.30 B.1.177.31 B.1.177.32 B.1.177.33 B.1.177.34 B.1.177.35 B.1.177.36 B.1.177.37 B.1.177.38 B.1.177.39 B.1.177.4 B.1.177.40 B.1.177.41 B.1.177.42 B.1.177.43 B.1.177.44 B.1.177.45 B.1.177.46 B.1.177.47 B.1.177.48 B.1.177.49 B.1.177.5 B.1.177.50 B.1.177.51 B.1.177.52 B.1.177.53 B.1.177.54 B.1.177.55 B.1.177.56 B.1.177.57 B.1.177.58 B.1.177.59 B.1.177.6 B.1.177.60 B.1.177.61 B.1.177.62 B.1.177.63 B.1.177.64 B.1.177.65 B.1.177.66 B.1.177.67 B.1.177.68 B.1.177.69 B.1.177.7 B.1.177.70 B.1.177.71 B.1.177.72 B.1.177.73 B.1.177.74 B.1.177.75 B.1.177.76 B.1.177.77 B.1.177.78 B.1.177.8 B.1.177.80 B.1.177.81 B.1.177.82 B.1.177.83 B.1.177.84 B.1.177.85 B.1.177.86 B.1.177.87 B.1.177.88 B.1.177.89 B.1.177.9 B.1.178 B.1.179 B.1.180 B.1.181 B.1.182 B.1.184 B.1.187 B.1.188 B.1.189 B.1.190 B.1.192 B.1.194 B.1.195 B.1.198 B.1.199 B.1.2 B.1.201 B.1.203 B.1.205 B.1.206 B.1.208 B.1.210 B.1.211 B.1.212 B.1.213 B.1.214 B.1.214.1 B.1.214.2 B.1.214.3 B.1.214.4 B.1.215 B.1.218 B.1.219 B.1.22 B.1.22.1 B.1.220 B.1.221 B.1.221.1 B.1.221.2 B.1.221.3 B.1.221.4 B.1.222 B.1.223 B.1.224 B.1.225 B.1.227 B.1.229 B.1.23 B.1.231 B.1.232 B.1.233 B.1.234 B.1.235 B.1.236 B.1.237 B.1.238 B.1.239 B.1.240 B.1.240.1 B.1.240.2 B.1.241 B.1.242 B.1.243 B.1.243.1 B.1.243.2 B.1.245 B.1.247 B.1.248 B.1.249 B.1.250 B.1.251 B.1.252 B.1.254 B.1.256 B.1.258 B.1.258.10 B.1.258.11 B.1.258.12 B.1.258.14 B.1.258.15 B.1.258.16 B.1.258.17 B.1.258.18 B.1.258.19 B.1.258.2 B.1.258.20 B.1.258.21 B.1.258.22 B.1.258.23 B.1.258.24 B.1.258.3 B.1.258.4 B.1.258.5 B.1.258.6 B.1.258.7 B.1.258.9 B.1.260 B.1.263 B.1.264 B.1.264.1 B.1.265 B.1.267 B.1.268 B.1.270 B.1.273 B.1.274 B.1.276 B.1.277 B.1.279 B.1.280 B.1.281 B.1.282 B.1.284 B.1.285 B.1.287 B.1.289 B.1.291 B.1.292 B.1.293 B.1.294 B.1.298 B.1.3 B.1.301 B.1.302 B.1.304 B.1.305 B.1.306 B.1.308 B.1.309 B.1.310 B.1.311 B.1.313 B.1.314 B.1.315 B.1.316 B.1.318 B.1.319 B.1.320 B.1.321 B.1.323 B.1.324 B.1.325 B.1.326 B.1.328 B.1.329 B.1.330 B.1.332 B.1.333 B.1.334 B.1.335 B.1.336 B.1.337 B.1.338 B.1.340 B.1.341 B.1.342 B.1.343 B.1.344 B.1.346 B.1.348 B.1.349 B.1.35 B.1.350 B.1.350.1 B.1.351 B.1.351.1 B.1.351.2 B.1.351.3 B.1.351.5 B.1.354 B.1.355 B.1.356 B.1.357 B.1.358 B.1.359 B.1.36 B.1.36.1 B.1.36.10 B.1.36.12 B.1.36.16 B.1.36.17 B.1.36.18 B.1.36.19 B.1.36.2 B.1.36.20 B.1.36.21 B.1.36.22 B.1.36.23 B.1.36.24 B.1.36.25 B.1.36.26 B.1.36.27 B.1.36.28 B.1.36.29 B.1.36.31 B.1.36.33 B.1.36.34 B.1.36.35 B.1.36.36 B.1.36.37 B.1.36.38 B.1.36.39 B.1.36.7 B.1.36.8 B.1.36.9 B.1.360 B.1.361 B.1.362 B.1.362.1 B.1.362.2 B.1.363 B.1.366 B.1.367 B.1.369 B.1.369.1 B.1.37 B.1.370 B.1.371 B.1.372 B.1.375 B.1.377 B.1.378 B.1.379 B.1.38 B.1.380 B.1.381 B.1.382 B.1.383 B.1.384 B.1.385 B.1.387 B.1.388 B.1.389 B.1.39 B.1.390 B.1.391 B.1.393 B.1.395 B.1.396 B.1.397 B.1.398 B.1.399 B.1.40 B.1.400 B.1.400.1 B.1.401 B.1.402 B.1.403 B.1.404 B.1.405 B.1.406 B.1.407 B.1.408 B.1.409 B.1.411 B.1.413 B.1.415 B.1.415.1 B.1.416 B.1.416.1 B.1.417 B.1.418 B.1.420 B.1.421 B.1.422 B.1.423 B.1.424 B.1.425 B.1.426 B.1.427 B.1.428 B.1.428.1 B.1.428.2 B.1.428.3 B.1.429 B.1.429.1 B.1.431 B.1.432 B.1.433 B.1.434 B.1.435 B.1.436 B.1.437 B.1.438 B.1.438.1 B.1.438.2 B.1.438.3 B.1.438.4 B.1.439 B.1.44 B.1.441 B.1.442 B.1.443 B.1.444 B.1.445 B.1.446 B.1.448 B.1.450 B.1.451 B.1.452 B.1.453 B.1.456 B.1.458 B.1.459 B.1.460 B.1.462 B.1.463 B.1.465 B.1.466 B.1.466.1 B.1.466.2 B.1.467 B.1.468 B.1.469 B.1.470 B.1.471 B.1.473 B.1.474 B.1.475 B.1.476 B.1.478 B.1.479 B.1.480 B.1.482 B.1.483 B.1.485 B.1.486 B.1.487 B.1.488 B.1.489 B.1.490 B.1.491 B.1.492 B.1.493 B.1.494 B.1.495 B.1.496 B.1.497 B.1.498 B.1.499 B.1.499.1 B.1.500 B.1.501 B.1.502 B.1.503 B.1.504 B.1.505 B.1.506 B.1.507 B.1.508 B.1.509 B.1.510 B.1.511 B.1.513 B.1.515 B.1.516 B.1.517 B.1.517.1 B.1.518 B.1.520 B.1.521 B.1.523 B.1.524 B.1.525 B.1.526 B.1.527 B.1.528 B.1.529 B.1.530 B.1.531 B.1.532 B.1.533 B.1.534 B.1.535 B.1.536 B.1.537 B.1.538 B.1.539 B.1.540 B.1.541 B.1.542 B.1.543 B.1.544 B.1.545 B.1.546 B.1.547 B.1.548 B.1.549 B.1.550 B.1.551 B.1.552 B.1.554 B.1.555 B.1.556 B.1.557 B.1.558 B.1.559 B.1.560 B.1.561 B.1.562 B.1.563 B.1.564 B.1.564.1 B.1.565 B.1.566 B.1.567 B.1.568 B.1.569 B.1.570 B.1.571 B.1.572 B.1.573 B.1.574 B.1.575 B.1.575.1 B.1.575.2 B.1.576 B.1.577 B.1.578 B.1.579 B.1.580 B.1.581 B.1.582 B.1.585 B.1.586 B.1.587 B.1.588 B.1.588.1 B.1.589 B.1.590 B.1.591 B.1.592 B.1.593 B.1.594 B.1.595 B.1.595.1 B.1.595.2 B.1.595.3 B.1.595.4 B.1.596 B.1.596.1 B.1.597 B.1.598 B.1.599 B.1.6 B.1.600 B.1.601 B.1.602 B.1.603 B.1.604 B.1.605 B.1.606 B.1.607 B.1.609 B.1.610 B.1.611 B.1.612 B.1.613 B.1.614 B.1.615 B.1.616 B.1.617 B.1.617.1 B.1.617.2 B.1.617.3 B.1.618 B.1.619 B.1.619.1 B.1.620 B.1.621 B.1.621.1 B.1.621.2 B.1.622 B.1.623 B.1.625 B.1.626 B.1.627 B.1.629 B.1.630 B.1.631 B.1.632 B.1.633 B.1.634 B.1.635 B.1.636 B.1.637 B.1.637.1 B.1.638 B.1.639 B.1.640 B.1.640.1 B.1.640.2 B.1.641 B.1.67 B.1.69 B.1.70 B.1.76 B.1.77 B.1.78 B.1.8 B.1.81 B.1.83 B.1.84 B.1.9 B.1.9.1 B.1.9.2 B.1.9.3 B.1.9.4 B.1.9.5 B.1.91 B.1.93 B.1.94 B.1.96 B.1.97 B.10 B.11 B.12 B.13 B.15 B.18 B.19 B.20 B.23 B.26 B.27 B.28 B.29 B.3 B.3.1 B.30 B.31 B.32 B.33 B.34 B.35 B.36 B.37 B.38 B.39 B.4 B.4.1 B.4.2 B.4.4 B.4.5 B.4.6 B.4.7 B.4.8 B.40 B.41 B.42 B.43 B.44 B.45 B.46 B.47 B.49 B.5 B.50 B.51 B.52 B.53 B.55 B.56 B.57 B.58 B.6 B.6.1 B.6.2 B.6.3 B.6.4 B.6.5 B.6.6 B.6.8 B.60 B.61 BA.1 BA.1.1 BA.1.1.1 BA.1.1.10 BA.1.1.11 BA.1.1.12 BA.1.1.13 BA.1.1.14 BA.1.1.15 BA.1.1.16 BA.1.1.17 BA.1.1.18 BA.1.1.2 BA.1.1.3 BA.1.1.4 BA.1.1.5 BA.1.1.6 BA.1.1.7 BA.1.1.8 BA.1.1.9 BA.1.10 BA.1.12 BA.1.13 BA.1.13.1 BA.1.14 BA.1.14.1 BA.1.14.2 BA.1.15 BA.1.15.1 BA.1.15.2 BA.1.15.3 BA.1.16 BA.1.16.1 BA.1.16.2 BA.1.17 BA.1.17.1 BA.1.17.2 BA.1.18 BA.1.19 BA.1.2 BA.1.20 BA.1.21 BA.1.21.1 BA.1.22 BA.1.23 BA.1.24 BA.1.3 BA.1.4 BA.1.5 BA.1.6 BA.1.7 BA.1.8 BA.1.9 BA.2 BA.2.1 BA.2.10 BA.2.10.1 BA.2.10.2 BA.2.10.3 BA.2.10.4 BA.2.11 BA.2.12 BA.2.12.1 BA.2.12.2 BA.2.13 BA.2.13.1 BA.2.14 BA.2.15 BA.2.16 BA.2.17 BA.2.18 BA.2.19 BA.2.2 BA.2.2.1 BA.2.20 BA.2.21 BA.2.22 BA.2.23 BA.2.23.1 BA.2.24 BA.2.25 BA.2.25.1 BA.2.26 BA.2.27 BA.2.28 BA.2.29 BA.2.3 BA.2.3.1 BA.2.3.10 BA.2.3.11 BA.2.3.12 BA.2.3.13 BA.2.3.14 BA.2.3.15 BA.2.3.16 BA.2.3.17 BA.2.3.18 BA.2.3.19 BA.2.3.2 BA.2.3.20 BA.2.3.21 BA.2.3.22 BA.2.3.4 BA.2.3.5 BA.2.3.6 BA.2.3.7 BA.2.3.8 BA.2.3.9 BA.2.30 BA.2.31 BA.2.31.1 BA.2.32 BA.2.33 BA.2.34 BA.2.35 BA.2.36 BA.2.37 BA.2.38 BA.2.38.1 BA.2.38.2 BA.2.38.3 BA.2.38.4 BA.2.39 BA.2.4 BA.2.40 BA.2.40.1 BA.2.41 BA.2.42 BA.2.43 BA.2.44 BA.2.45 BA.2.46 BA.2.47 BA.2.48 BA.2.49 BA.2.5 BA.2.50 BA.2.51 BA.2.52 BA.2.53 BA.2.54 BA.2.55 BA.2.56 BA.2.56.1 BA.2.57 BA.2.58 BA.2.59 BA.2.6 BA.2.60 BA.2.61 BA.2.62 BA.2.63 BA.2.64 BA.2.65 BA.2.66 BA.2.67 BA.2.68 BA.2.69 BA.2.7 BA.2.70 BA.2.71 BA.2.72 BA.2.73 BA.2.74 BA.2.75 BA.2.75.1 BA.2.75.10 BA.2.75.2 BA.2.75.3 BA.2.75.4 BA.2.75.5 BA.2.75.6 BA.2.75.7 BA.2.75.8 BA.2.75.9 BA.2.76 BA.2.76.1 BA.2.76.2 BA.2.77 BA.2.78 BA.2.79 BA.2.79.1 BA.2.8 BA.2.80 BA.2.81 BA.2.82 BA.2.83 BA.2.85 BA.2.9 BA.2.9.1 BA.2.9.2 BA.2.9.3 BA.2.9.4 BA.2.9.5 BA.2.9.6 BA.2.9.7 BA.3 BA.3.1 BA.4 BA.4.1 BA.4.1.1 BA.4.1.10 BA.4.1.2 BA.4.1.3 BA.4.1.4 BA.4.1.5 BA.4.1.6 BA.4.1.7 BA.4.1.8 BA.4.1.9 BA.4.2 BA.4.3 BA.4.4 BA.4.5 BA.4.6 BA.4.6.1 BA.4.6.2 BA.4.6.3 BA.4.6.4 BA.4.6.5 BA.4.7 BA.4.8 BA.5 BA.5.1 BA.5.1.1 BA.5.1.10 BA.5.1.11 BA.5.1.12 BA.5.1.14 BA.5.1.15 BA.5.1.16 BA.5.1.17 BA.5.1.18 BA.5.1.19 BA.5.1.2 BA.5.1.20 BA.5.1.21 BA.5.1.22 BA.5.1.23 BA.5.1.24 BA.5.1.25 BA.5.1.26 BA.5.1.27 BA.5.1.28 BA.5.1.29 BA.5.1.3 BA.5.1.30 BA.5.1.31 BA.5.1.4 BA.5.1.5 BA.5.1.6 BA.5.1.7 BA.5.1.8 BA.5.1.9 BA.5.10 BA.5.10.1 BA.5.11 BA.5.2 BA.5.2.1 BA.5.2.10 BA.5.2.11 BA.5.2.12 BA.5.2.13 BA.5.2.14 BA.5.2.16 BA.5.2.18 BA.5.2.19 BA.5.2.2 BA.5.2.20 BA.5.2.21 BA.5.2.22 BA.5.2.23 BA.5.2.24 BA.5.2.25 BA.5.2.26 BA.5.2.27 BA.5.2.28 BA.5.2.29 BA.5.2.3 BA.5.2.30 BA.5.2.31 BA.5.2.32 BA.5.2.33 BA.5.2.34 BA.5.2.35 BA.5.2.36 BA.5.2.37 BA.5.2.38 BA.5.2.39 BA.5.2.4 BA.5.2.40 BA.5.2.41 BA.5.2.42 BA.5.2.43 BA.5.2.44 BA.5.2.45 BA.5.2.46 BA.5.2.47 BA.5.2.48 BA.5.2.49 BA.5.2.5 BA.5.2.6 BA.5.2.7 BA.5.2.8 BA.5.2.9 BA.5.3 BA.5.3.1 BA.5.3.2 BA.5.3.3 BA.5.3.4 BA.5.3.5 BA.5.5 BA.5.5.1 BA.5.5.2 BA.5.5.3 BA.5.6 BA.5.6.1 BA.5.6.2 BA.5.6.3 BA.5.6.4 BA.5.7 BA.5.8 BA.5.9 BB.2 BC.1 BC.2 BD.1 BE.1 BE.1.1 BE.1.1.1 BE.1.1.2 BE.1.2 BE.1.2.1 BE.1.3 BE.1.4 BE.1.4.1 BE.1.4.2 BE.1.4.3 BE.1.4.4 BE.10 BE.2 BE.3 BE.4 BE.4.1 BE.4.1.1 BE.4.2 BE.5 BE.6 BE.7 BE.8 BE.9 BF.1 BF.1.1 BF.10 BF.10.1 BF.11 BF.11.1 BF.11.2 BF.11.3 BF.11.4 BF.11.5 BF.12 BF.13 BF.14 BF.15 BF.16 BF.17 BF.18 BF.19 BF.2 BF.20 BF.21 BF.22 BF.23 BF.24 BF.25 BF.26 BF.27 BF.28 BF.29 BF.3 BF.3.1 BF.30 BF.31 BF.31.1 BF.32 BF.33 BF.34 BF.4 BF.5 BF.5.1 BF.5.2 BF.6 BF.7 BF.7.1 BF.7.10 BF.7.11 BF.7.12 BF.7.13 BF.7.13.1 BF.7.13.2 BF.7.14 BF.7.15 BF.7.2 BF.7.3 BF.7.4 BF.7.4.1 BF.7.4.2 BF.7.5 BF.7.5.1 BF.7.6 BF.7.7 BF.7.8 BF.7.9 BF.8 BF.9 BG.1 BG.2 BG.3 BG.4 BG.5 BG.6 BG.7 BH.1 BJ.1 BK.1 BL.1 BL.1.1 BL.1.2 BL.1.3 BL.1.4 BL.2 BL.2.1 BL.3 BL.4 BL.5 BL.6 BM.1 BM.1.1 BM.1.1.1 BM.1.1.2 BM.1.1.3 BM.1.1.4 BM.1.1.5 BM.2 BM.2.1 BM.2.2 BM.2.3 BM.3 BM.4 BM.4.1 BM.4.1.1 BM.5 BM.6 BN.1 BN.1.1 BN.1.1.1 BN.1.2 BN.1.2.1 BN.1.3 BN.1.3.1 BN.1.3.2 BN.1.3.3 BN.1.3.4 BN.1.4 BN.1.4.1 BN.1.5 BN.1.5.1 BN.1.6 BN.1.7 BN.1.8 BN.1.9 BN.2 BN.2.1 BN.3 BN.3.1 BN.4 BN.5 BN.6 BP.1 BQ.1 BQ.1.1 BQ.1.1.1 BQ.1.1.10 BQ.1.1.11 BQ.1.1.12 BQ.1.1.13 BQ.1.1.14 BQ.1.1.15 BQ.1.1.16 BQ.1.1.17 BQ.1.1.18 BQ.1.1.19 BQ.1.1.2 BQ.1.1.20 BQ.1.1.21 BQ.1.1.22 BQ.1.1.23 BQ.1.1.24 BQ.1.1.25 BQ.1.1.26 BQ.1.1.27 BQ.1.1.28 BQ.1.1.29 BQ.1.1.3 BQ.1.1.30 BQ.1.1.31 BQ.1.1.32 BQ.1.1.34 BQ.1.1.4 BQ.1.1.5 BQ.1.1.6 BQ.1.1.7 BQ.1.1.8 BQ.1.1.9 BQ.1.10 BQ.1.10.1 BQ.1.11 BQ.1.12 BQ.1.13 BQ.1.13.1 BQ.1.14 BQ.1.15 BQ.1.16 BQ.1.17 BQ.1.18 BQ.1.19 BQ.1.2 BQ.1.20 BQ.1.21 BQ.1.22 BQ.1.23 BQ.1.24 BQ.1.25 BQ.1.25.1 BQ.1.26 BQ.1.26.1 BQ.1.27 BQ.1.28 BQ.1.3 BQ.1.4 BQ.1.5 BQ.1.6 BQ.1.7 BQ.1.8 BQ.1.8.1 BQ.1.8.2 BQ.1.9 BQ.2 BR.1 BR.1.1 BR.1.2 BR.2 BR.2.1 BR.3 BR.4 BS.1 BS.1.1 BS.1.2 BT.1 BT.2 BU.1 BU.2 BU.3 BV.1 BV.2 BW.1 BW.1.1 BY.1 BY.1.1 BY.1.1.1 BY.1.2 BY.1.2.1 BZ.1 C.1 C.1.1 C.1.2 C.10 C.11 C.12 C.13 C.14 C.16 C.17 C.18 C.19 C.2 C.2.1 C.20 C.21 C.22 C.23 C.25 C.26 C.27 C.28 C.29 C.3 C.30 C.30.1 C.31 C.32 C.33 C.34 C.35 C.36 C.36.1 C.36.2 C.36.3 C.36.3.1 C.37 C.37.1 C.38 C.39 C.4 C.40 C.5 C.6 C.7 C.8 C.9 CA.1 CA.2 CA.3 CA.3.1 CA.4 CA.5 CA.6 CA.7 CB.1 CC.1 CD.1 CD.2 CE.1 CF.1 CG.1 CH.1 CH.1.1 CH.1.1.1 CH.1.1.2 CH.1.1.3 CH.1.1.4 CH.2 CH.3 CH.3.1 CJ.1 CJ.1.1 CK.1 CK.1.1 CK.1.2 CK.2 CK.2.1 CK.2.1.1 CK.3 CL.1 CM.1 CM.10 CM.11 CM.12 CM.2 CM.2.1 CM.3 CM.4 CM.4.1 CM.5 CM.5.1 CM.5.2 CM.6 CM.6.1 CM.7 CM.8 CM.8.1 CM.9 CN.1 CN.2 CP.1 CP.1.1 CP.1.2 CP.1.3 CP.2 CP.3 CP.4 CP.5 CP.6 CQ.1 CQ.1.1 CQ.2 CR.1 CR.1.1 CR.1.2 CR.1.3 CR.2 CS.1 CT.1 CU.1 CV.1 CV.2 CW.1 CY.1 CZ.1 D.2 D.3 D.4 D.5 DA.1 DB.1 DB.2 DC.1 DD.1 DE.1 DE.2 DF.1 DF.1.1 DG.1 DH.1 DJ.1 DJ.1.1 DJ.1.2 DJ.1.3 DK.1 DL.1 DM.1 DN.1 DN.1.1 DP.1 DQ.1 DR.1 DS.1 DT.1 G.1 K.1 K.2 K.3 L.1 L.2 L.3 L.4 M.1 M.2 M.3 N.1 N.10 N.2 N.3 N.4 N.5 N.6 N.7 N.8 N.9 P.1 P.1.1 P.1.10 P.1.10.1 P.1.10.2 P.1.11 P.1.12 P.1.12.1 P.1.13 P.1.14 P.1.15 P.1.16 P.1.17 P.1.17.1 P.1.2 P.1.3 P.1.4 P.1.5 P.1.6 P.1.7 P.1.7.1 P.1.8 P.1.9 P.2 P.3 P.4 P.5 P.6 P.7 Q.1 Q.2 Q.3 Q.4 Q.5 Q.6 Q.7 Q.8 R.1 R.2 S.1 SARS-CoV-2 SNP U.1 U.2 U.3 V.1 V.2 W.1 W.2 W.3 W.4 XA XAA XAB XAC XAD XAE XAF XAG XAH XAJ XAK XAL XAM XAN XAP XAQ XAR XAS XAT XAU XAV XAW XAY XAY.1 XAY.1.1 XAY.1.2 XAY.2 XAY.3 XAZ XB XBA XBB XBB.1 XBB.1.1 XBB.1.2 XBB.1.3 XBB.1.4 XBB.1.4.1 XBB.1.5 XBB.1.6 XBB.1.7 XBB.1.8 XBB.1.9 XBB.1.9.1 XBB.2 XBB.2.1 XBB.2.2 XBB.3 XBB.3.1 XBB.3.2 XBB.3.3 XBB.4 XBB.4.1 XBB.5 XBB.6 XBB.6.1 XBC XBC.1 XBC.1.1 XBC.1.1.1 XBC.1.2 XBC.1.2.1 XBC.2 XBD XBE XBF XBG XBH XBJ XBK XBL XBM XBN XC XD XE XF XG XH XJ XK XL XM XN XP XQ XR XS XT XU XV XW XY XZ Y.1 Z.1 accessory_gene gene genome lineage mutation non_structural_gene recombinant structural_gene variant Ghana/ Senegal lineage A.11 Sierra Leone lineage A.12 Sweden/ Denmark lineage A.15 Japanese lineage A.16 French lineage A.17 Cote d'Ivoire/ Burkina Faso lineage A.18 Cote d'Ivoire/ Burkina Faso lineage A.19 USA lineage A.1 Australian lineage A.2.2 Scottish lineage A.2.3 Panama lineage A.2.4 Costa Rica lineage from pango-designation issue #33 A.2.5.1 Predominantly Italy lineage A.2.5.2 Predominantly Ecuador lineage, from pango-designation issue #168 A.2.5.3 Central American/ USA lineage A.2.5 Mali/ Burkina Faso lineage A.21 UAE lineage A.22 International lineage with a number of variants of potential biological concern, including 681R A.23.1 Ugandan lineage A.23 South Korean lineage A.24 Ugandan lineage A.25 UK lineage A.26 Mayotte/ European cluster with 18 changes in the long branch leading to this cluster, including 7 NS changes in the spike (L18F, L452R, N501Y, A653V, H655Y, D796Y, G1219V), on a 614D background. pango-designation issue #11. A.27 This lineage has 9 changes on its basal branch, including the 69-70del, N501T (not Y) and H655Y. (This variant is picked up by the qPCR S drop). pango-designation issue #12 A.28 Lineage circulating in multiple countries from pango-designation issue #78 A.29 Mostly Spanish lineage now includes South and Central American sequences, other European countries and Kazakhstan. A.2 Lineage in several countries, associated with travel from Tanzania, from pango-designation issue #138 A.30 USA lineage A.3 USA lineage A.4 A lineage with a lot of representation from Spanish-speaking countries. A Spanish/ South-American lineage, but now with sequences from an outbreak in Scotland. Also now includes what was previously A.10. A.5 Thai lineage A.6 Indian lineage A.7 Indian lineage A.9 B.1.177.15.1 Alias of B.1.177.15.1, European Lineage AA.1 B.1.177.15.2 Alias of B.1.177.15.2, Welsh Lineage AA.2 B.1.177.15.3 Alias of B.1.177.15.3, Welsh Lineage AA.3 B.1.177.15.4 Alias of B.1.177.15.4, Welsh Lineage AA.4 B.1.177.15.5 Alias of B.1.177.15.5, Welsh Lineage AA.5 B.1.177.15.6 Alias of B.1.177.15.6, Welsh Lineage AA.6 B.1.177.15.7 Alias of B.1.177.15.7, Welsh Lineage AA.7 B.1.177.15.8 Alias of B.1.177.15.8, Welsh Lineage AA.8 B.1.160.16.1 Alias of B.1.160.16.1, Denmark, grown out of big swiss cluster AB.1 B.1.1.405.1 Alias of B.1.1.405.1, UK lineage AC.1 B.1.1.315.1 Alias of B.1.1.315.1, Denmark lineage AD.1 B.1.1.315.2.1 Alias of B.1.1.315.2.1, Lithuanian lineage AD.2.1 B.1.1.315.2 Alias of B.1.1.315.2, UK lineage AD.2 B.1.1.306.1 Alias of B.1.1.306.1, Zambian AE.1 B.1.1.306.2 Alias of B.1.1.306.2, Bahrain AE.2 B.1.1.306.3 Alias of B.1.1.306.3, Zambia and Rwanda AE.3 B.1.1.306.4 Alias of B.1.1.306.4, Bahrain AE.4 B.1.1.306.5 Alias of B.1.1.306.5, Zambia AE.5 B.1.1.306.6 Alias of B.1.1.306.6, Bahrain AE.6 B.1.1.306.7 Alias of B.1.1.306.7, Bahrain AE.7 B.1.1.306.8 Alias of B.1.1.306.8, Canada lineage AE.8 B.1.1.305.1 Alias of B.1.1.305.1, Switzerland AF.1 B.1.1.297.1 Alias of B.1.1.297.1, Netherlands lineage AG.1 B.1.1.241.1 Alias of B.1.1.241.1, Swiss Lineage AH.1 B.1.1.241.2 Alias of B.1.1.241.2, French Lineage AH.2 B.1.1.241.3 Alias of B.1.1.241.3, Finnish Lineage AH.3 B.1.1.240.1 Alias of B.1.1.240.1, Portugal lineage AJ.1 B.1.1.232.1 Alias of B.1.1.232.1, UK lineage AK.1 B.1.1.232.2 Alias of B.1.1.232.2, German lineage AK.2 B.1.1.231.1 Alias of B.1.1.231.1, Canada lineage AL.1 B.1.1.216.1 Alias of B.1.1.216.1, Portugal lineage AM.1 B.1.1.216.2 Alias of B.1.1.216.2, Canadian lineage AM.2 B.1.1.216.3 Alias of B.1.1.216.3, UK lineage AM.3 B.1.1.216.4 Alias of B.1.1.216.4, Canadian lineage AM.4 B.1.1.200.1 Alias of B.1.1.200.1, Sweden and Netherlands, from B.1.1.130 AN.1 B.1.1.70.1 Alias of B.1.1.70.1, Wales lineage AP.1 B.1.1.39.1 Alias of B.1.1.39.1, Finland lineage AQ.1 B.1.1.39.2 Alias of B.1.1.39.2, Denmark lineage AQ.2 B.1.1.317.1 Alias of B.1.1.317.1, UK lineage AS.1 B.1.1.317.2 Alias of B.1.1.317.2, UK lineage AS.2 B.1.1.370.1 Alias of B.1.1.370.1, Russia and Finland lineage from pango-designation issue #47 AT.1 B.1.466.2.1 Alias of B.1.466.2.1, predominantly Papua New Guinea with some Australia sequences AU.1 B.1.466.2.2 Alias of B.1.466.2.2, Malaysia lineage AU.2 B.1.466.2.3 Alias of B.1.466.2.3, predominantly Australia with some Papua New Guinea and Singapore sequences AU.3 B.1.1.482.1 Alias of B.1.1.482.1, UK and France lineage with several VOC/VUI-like mutations, from pango-designation issue #73 AV.1 B.1.1.464.1 Alias of B.1.1.464.1, Canadian lineage AW.1 B.1.617.2.100 Alias of B.1.617.2.100, USA lineage AY.100 B.1.617.2.101 Alias of B.1.617.2.101, Brazil and Chile lineage AY.101 B.1.617.2.102.1 Alias of B.1.617.2.102.1, Peru lineage, from pango-designation issue #325 AY.102.1 B.1.617.2.102.2 Alias of B.1.617.2.102.2, Peru lineage, from pango-designation issue #330 AY.102.2 B.1.617.2.102 Alias of B.1.617.2.102, Peru and Chile lineage, from pango-designation issue #272 AY.102 B.1.617.2.103.1 Alias of B.1.617.2.103.1, Argentina lineage AY.103.1 B.1.617.2.103.2 Alias of B.1.617.2.103.2, Canada lineage AY.103.2 B.1.617.2.103 Alias of B.1.617.2.103, USA lineage AY.103 B.1.617.2.104 Alias of B.1.617.2.104, Sri Lanka lineage AY.104 B.1.617.2.105 Alias of B.1.617.2.105, USA lineage AY.105 B.1.617.2.106 Alias of B.1.617.2.106, lineage in Jordan and other countries AY.106 B.1.617.2.107 Alias of B.1.617.2.107, USA lineage AY.107 B.1.617.2.108 Alias of B.1.617.2.108, lineage in Pakistan and other countries AY.108 B.1.617.2.109 Alias of B.1.617.2.109, lineage in Nigeria and other countries AY.109 B.1.617.2.10 Alias of B.1.617.2.10, UK lineage, from pango-designation issue #180 AY.10 B.1.617.2.110 Alias of B.1.617.2.110, USA lineage AY.110 B.1.617.2.111 Alias of B.1.617.2.111, UK lineage AY.111 B.1.617.2.112.1 Alias of B.1.617.2.112.1, Bahrain lineage AY.112.1 B.1.617.2.112.2 Alias of B.1.617.2.112.2, mainly found in India, from pango-designation issue #385 AY.112.2 B.1.617.2.112.3 Alias of B.1.617.2.112.3, mainly found in Israel, from pango-designation issue #388 AY.112.3 B.1.617.2.112 Alias of B.1.617.2.112, lineage in India and other countries, from pango-designation issue #283 AY.112 B.1.617.2.113 Alias of B.1.617.2.113, USA and Mexico lineage AY.113 B.1.617.2.114 Alias of B.1.617.2.114, USA lineage AY.114 B.1.617.2.116.1 Alias of B.1.617.2.116.1, USA lineage AY.116.1 B.1.617.2.116 Alias of B.1.617.2.116, Africa lineage AY.116 B.1.617.2.117 Alias of B.1.617.2.117, USA lineage AY.117 B.1.617.2.118 Alias of B.1.617.2.118, USA lineage AY.118 B.1.617.2.119.1 Alias of B.1.617.2.119.1, Chile and Peru lineage, from pango-designation issue #336 AY.119.1 B.1.617.2.119.2 Alias of B.1.617.2.119.2, USA lineage, from pango-designation issue #288 AY.119.2 B.1.617.2.119 Alias of B.1.617.2.119, USA lineage AY.119 B.1.617.2.11 Alias of B.1.617.2.11, UK lineage, from pango-designation issue #142 AY.11 B.1.617.2.120.1 Alias of B.1.617.2.120.1, USA lineage AY.120.1 B.1.617.2.120.2.1 Alias of B.1.617.2.120.2.1, European lineage AY.120.2.1 B.1.617.2.120.2 Alias of B.1.617.2.120.2, South Africa lineage AY.120.2 B.1.617.2.120 Alias of B.1.617.2.120, UK lineage AY.120 B.1.617.2.121.1 Alias of B.1.617.2.121.1, Poland and Germany lineage AY.121.1 B.1.617.2.121 Alias of B.1.617.2.121, European lineage AY.121 B.1.617.2.122.1 Alias of B.1.617.2.122.1, Israel lineage, formally AY.12 but renamed as descends from AY.122 which was designated after AY.12, from pango-designation issue #170 AY.122.1 B.1.617.2.122.2 Alias of B.1.617.2.122.2, Finland and Estonia lineage, from pango-designation issue #273 AY.122.2 B.1.617.2.122.3 Alias of B.1.617.2.122.3, Denmark and Sweden lineage, from pango-designation issue #371 AY.122.3 B.1.617.2.122.4 Alias of B.1.617.2.122.4, South America and USA lineage AY.122.4 B.1.617.2.122.5 Alias of B.1.617.2.122.5, South Korea lineage AY.122.5 B.1.617.2.122.6 Alias of B.1.617.2.122.6, mainly found in France, from pango-designation issue #394 AY.122.6 B.1.617.2.122 Alias of B.1.617.2.122, European lineage AY.122 B.1.617.2.123.1 Alias of B.1.617.2.123.1, Belgium lineage, from pango-designation issue #354 AY.123.1 B.1.617.2.123 Alias of B.1.617.2.123, Predominantly Belgium and France lineage AY.123 B.1.617.2.124.1.1 Alias of B.1.617.2.124.1.1, lineage in Mauritius and other countries AY.124.1.1 B.1.617.2.124.1 Alias of B.1.617.2.124.1, lineage in Portugal and other European countries, from pango-designation issue #345 AY.124.1 B.1.617.2.124 Alias of B.1.617.2.124, lineage in Portugal and other European countries AY.124 B.1.617.2.125.1 Alias of B.1.617.2.125.1, Australia lineage AY.125.1 B.1.617.2.125 Alias of B.1.617.2.125, European lineage, from pango-designation issue #328 AY.125 B.1.617.2.126 Alias of B.1.617.2.126, European lineage, from pango-designation issue #253 AY.126 B.1.617.2.127.1 Alias of B.1.617.2.127.1, lineage in Djibouti and other countries, from pango-designation issue #352 AY.127.1 B.1.617.2.127.2 Alias of B.1.617.2.127.2, Qatar lineage AY.127.2 B.1.617.2.127.3 Alias of B.1.617.2.127.3, Qatar lineage, from pango-designation issue #525 AY.127.3 B.1.617.2.127 Alias of B.1.617.2.127, lineage in India and other countries, from pango-designation issue #342 AY.127 B.1.617.2.128 Alias of B.1.617.2.128, lineage in Estonia, Georgia and other countries, from pango-designation issue #309 AY.128 B.1.617.2.129 Alias of B.1.617.2.129, European lineage, from pango-designation issue #329 AY.129 B.1.617.2.130 Alias of B.1.617.2.130, Bahrain lineage, from pango-designation issue #351 AY.130 B.1.617.2.131 Alias of B.1.617.2.131, mainly reported from Bangladesh, from pango-designation issue #373 AY.131 B.1.617.2.132 Alias of B.1.617.2.132, Denmark lineage, from pango-designation issue #379 AY.132 B.1.617.2.133 Alias of B.1.617.2.133, France Germany and UK lineage (with some samples from elsewhere, notably Senegal and Ghana), from pango-designation issue #380 AY.133 B.1.617.2.134 European lineage within diversity of B.1.617.2. Previously assigned AY.39.4, pango-designation issue #406 AY.134 B.1.617.2.13 Alias of B.1.617.2.13, USA lineage AY.13 B.1.617.2.14 Alias of B.1.617.2.14, USA lineage AY.14 B.1.617.2.15 Alias of B.1.617.2.15, Canada lineage AY.15 B.1.617.2.16.1 Alias of B.1.617.2.16.1, France lineage AY.16.1 B.1.617.2.16 Alias of B.1.617.2.16, lineage in Kenya and multiple other countries AY.16 B.1.617.2.17 Alias of B.1.617.2.17, Ireland and Northern Ireland lineage AY.17 B.1.617.2.18 Alias of B.1.617.2.18, Canada lineage AY.18 B.1.617.2.19 Alias of B.1.617.2.19, South Africa lineage AY.19 B.1.617.2.1 Alias of B.1.617.2.1, in several European countries, from pango-designation issue #95 AY.1 B.1.617.2.20.1 Alias of B.1.617.2.20.1, Czech Republic lineage AY.20.1 B.1.617.2.20 Alias of B.1.617.2.20, USA and Mexico lineage AY.20 B.1.617.2.21 Alias of B.1.617.2.21, lineage predominantly in Italy and Switzerland AY.21 B.1.617.2.22 Alias of B.1.617.2.22, predominantly Portugal lineage AY.22 B.1.617.2.23.1 Alias of B.1.617.2.23.1, Singapore lineage, from pango-designation issue #237 AY.23.1 B.1.617.2.23.2 Alias of B.1.617.2.23.2, European lineage, from pango-designation issue #265 AY.23.2 B.1.617.2.23 Alias of B.1.617.2.23, predominantly Singapore and Indonesia lineage, from pango-designation issue #175 AY.23 B.1.617.2.24.1 Alias of B.1.617.2.24.1, Brunei lineage AY.24.1 B.1.617.2.24 Alias of B.1.617.2.24, predominantly Indonesia lineage, from pango-designation issue #175 AY.24 B.1.617.2.25.1.1 Alias of B.1.617.2.25.1.1, Peru lineage, from pango-designation issue #355 AY.25.1.1 B.1.617.2.25.1.2 Alias of B.1.617.2.25.1.2, Trinidad and Tobago lineage AY.25.1.2 B.1.617.2.25.1 Alias of B.1.617.2.25.1, Canada and USA lineage, from pango-designation issue #313 AY.25.1 B.1.617.2.25.2 Alias of B.1.617.2.25.2, Argentina lineage AY.25.2 B.1.617.2.25.3 Alias of B.1.617.2.25.3, Canada and USA lineage AY.25.3 B.1.617.2.25 Alias of B.1.617.2.25, USA lineage, from pango-designation issue #181 AY.25 B.1.617.2.26.1 Alias of B.1.617.2.26.1, Peru lineage, from pango-designation issue #278 AY.26.1 B.1.617.2.26 Alias of B.1.617.2.26, USA and Mexico lineage, from pango-designation issue #188 AY.26 B.1.617.2.27 Alias of B.1.617.2.27, Canada lineage, from pango-designation issue #196 AY.27 B.1.617.2.28 Alias of B.1.617.2.28, Sri Lanka lineage, from pango-designation issue #199 AY.28 B.1.617.2.29.1 Alias of B.1.617.2.29.1, Japan lineage, from pango-designation issue #224 AY.29.1 B.1.617.2.29.2 Alias of B.1.617.2.29.2, Japan lineage, from pango-designation issue #381 AY.29.2 B.1.617.2.29 Alias of B.1.617.2.29, Japan lineage, from pango-designation issue #208 AY.29 B.1.617.2.2 Alias of B.1.617.2.2, in USA with K417N, from pango-designation issue #107 AY.2 B.1.617.2.3.1 Alias of B.1.617.2.3.1, USA lineage, from pango-designation issue #147 AY.3.1 B.1.617.2.3.2 Alias of B.1.617.2.3.2, Peru lineage, from pango-designation issue #312 AY.3.2 B.1.617.2.3.3 Alias of B.1.617.2.3.3, USA lineage, from pango-designation issue #365 AY.3.3 B.1.617.2.3.4 Alias of B.1.617.2.3.4, Bahrain lineage AY.3.4 B.1.617.2.30 Alias of B.1.617.2.30, Thailand and Cambodia lineage, from pango-designation issue #207 AY.30 B.1.617.2.31 Alias of B.1.617.2.31, lineage associated with Myanmar. At the time of designation, almost all sequences in this lineage were from Myanmar or had travel history from Myanmar, from pango-designation issue #206 AY.31 B.1.617.2.32 Alias of B.1.617.2.32, South Africa lineage, from pango-designation issue #209 AY.32 B.1.617.2.33.1 Alias of B.1.617.2.33.1, Reunion and France lineage, from pango-designation issue #370 AY.33.1 B.1.617.2.33.2 Alias of B.1.617.2.33.2, mainly found in Germany, Poland, Gibraltar and Spain, from pango-designation issue #403 AY.33.2 B.1.617.2.33 Alias of B.1.617.2.33, Lineage circulating mostly in Belgium, Denmark, France, Netherlands, Germany, from pango-designation issues #215 and #219 AY.33 B.1.617.2.34.1.1 Alias of B.1.617.2.34.1.1, Brazil and Chile lineage AY.34.1.1 B.1.617.2.34.1 Alias of B.1.617.2.34.1, lineage in multiple countries including Gambia, Senegal, Benin and Mali, from pango-designation issue #255 AY.34.1 B.1.617.2.34.2 Alias of B.1.617.2.34.2, lineage in multiple countries including Martinique, from pango-designation issue #269 AY.34.2 B.1.617.2.34 Alias of B.1.617.2.34, lineage with spike Q677H circulating in multiple countries, from pango-designation issue #217 AY.34 B.1.617.2.35 Alias of B.1.617.2.35, lineage with spike E484Q circulating in USA, from pango-designation issue #217 AY.35 B.1.617.2.36.1 Alias of B.1.617.2.36.1, lineage in Germany and other countries, from pango-designation issue #434 AY.36.1 B.1.617.2.36 Alias of B.1.617.2.36, lineage predominantly in Nigeria, UK and USA, from pango-designation issue #225 AY.36 B.1.617.2.37 Alias of B.1.617.2.37, lineage predominantly in Liberia, USA and France, from pango-designation issue #228 AY.37 B.1.617.2.38 Alias of B.1.617.2.38, lineage predominantly in South Africa, from pango-designation issue #229 AY.38 B.1.617.2.39.1.1 Alias of B.1.617.2.39.1.1, predominantly New Zealand lineage, from pango-designation issue #234 AY.39.1.1 B.1.617.2.39.1.2 Alias of B.1.617.2.39.1.2, Australia lineage, from pango-designation issue #307 AY.39.1.2 B.1.617.2.39.1.3 Alias of B.1.617.2.39.1.3, Australia lineage, from pango-designation issue #339 AY.39.1.3 B.1.617.2.39.1.4 Alias of B.1.617.2.39.1.4, Australian lineage, from pango-designation issue #438 AY.39.1.4 B.1.617.2.39.1 Alias of B.1.617.2.39.1, Australia and USA lineage, from pango-designation issue #234 AY.39.1 B.1.617.2.39.2 Alias of B.1.617.2.39.2, Peru lineage, from pango-designation issue #295 AY.39.2 B.1.617.2.39.3 Alias of B.1.617.2.39.3, Trinidad and Tobago lineage AY.39.3 B.1.617.2.39 Alias of B.1.617.2.39, predominantly USA lineage, from pango-designation issue #234 AY.39 B.1.617.2.3 Alias of B.1.617.2.3, USA lineage, from pango-designation issue #121 AY.3 B.1.617.2.4.10 Alias of B.1.617.2.4.10, European lineage, from pango-designation issue #332 AY.4.10 B.1.617.2.4.11 Alias of B.1.617.2.4.11, European lineage AY.4.11 B.1.617.2.4.12 Alias of B.1.617.2.4.12, Canada lineage AY.4.12 B.1.617.2.4.13 Alias of B.1.617.2.4.13, European lineage AY.4.13 B.1.617.2.4.14 Alias of B.1.617.2.4.14, lineage in Denmark and other countries AY.4.14 B.1.617.2.4.15 Alias of B.1.617.2.4.15, Denmark lineage AY.4.15 B.1.617.2.4.16 Alias of B.1.617.2.4.16, Gibraltar lineage AY.4.16 B.1.617.2.4.17 Alias of B.1.617.2.4.17, Lithuania lineage AY.4.17 B.1.617.2.4.1 Alias of B.1.617.2.4.1, UK lineage, from pango-designation issue #214 AY.4.1 B.1.617.2.4.2.1 Alias of B.1.617.2.4.2.1, predominantly UK lineage, from pango-designation issue #248 AY.4.2.1 B.1.617.2.4.2.2 Alias of B.1.617.2.4.2.2, UK lineage, from pango-designation issue #249 AY.4.2.2 B.1.617.2.4.2.3 Alias of B.1.617.2.4.2.3, European lineage, from pango-designation issue #356 AY.4.2.3 B.1.617.2.4.2.4 Alias of B.1.617.2.4.2.4, European lineage AY.4.2.4 B.1.617.2.4.2.5 Alias of B.1.617.2.4.2.5, UK lineage, from pango-designation issue #543 AY.4.2.5 B.1.617.2.4.2 Alias of B.1.617.2.4.2, predominantly UK lineage, from pango-designation issue #223 AY.4.2 B.1.617.2.4.3 Alias of B.1.617.2.4.3, lineage in several countries, from pango-designation issue #222 AY.4.3 B.1.617.2.4.4 Alias of B.1.617.2.4.4, lineage in several European countries, from pango-designation issue #237 AY.4.4 B.1.617.2.4.5 Alias of B.1.617.2.4.5, predominantly Lithuania lineage, from pango-designation issue #241 AY.4.5 B.1.617.2.4.6 Alias of B.1.617.2.4.6, European lineage, from pango-designation issue #264 AY.4.6 B.1.617.2.4.7 Alias of B.1.617.2.4.7, lineage in Aruba and other countries, from pango-designation issue #291 AY.4.7 B.1.617.2.4.8 Alias of B.1.617.2.4.8, UK lineage, from pango-designation issue #304 AY.4.8 B.1.617.2.4.9 Alias of B.1.617.2.4.9, European lineage, from pango-designation issue #332 AY.4.9 B.1.617.2.40 Alias of B.1.617.2.40, Reunion lineage, from pango-designation issue #237 AY.40 B.1.617.2.41 Alias of B.1.617.2.41, European lineage, from pango-designation issue #237 AY.41 B.1.617.2.42.1 Alias of B.1.617.2.42.1, lineage in Bonaire, Curacao and other countries, from pango-designation issue #331 AY.42.1 B.1.617.2.42 Alias of B.1.617.2.42, European lineage, from pango-designation issue #239 AY.42 B.1.617.2.43.1 Alias of B.1.617.2.43.1, Brazil lineage, from pango-designation issue #319 AY.43.1 B.1.617.2.43.2 Alias of B.1.617.2.43.2, Brazil lineage, from pango-designation issue #319 AY.43.2 B.1.617.2.43.3 Alias of B.1.617.2.43.3, Chile lineage, from pango-designation issue #337 AY.43.3 B.1.617.2.43.4 Alias of B.1.617.2.43.4, Switzerland lineage, from pango-designation issue #317 AY.43.4 B.1.617.2.43.5 Alias of B.1.617.2.43.5, Portugal lineage, from pango-designation issue #335 AY.43.5 B.1.617.2.43.6 Alias of B.1.617.2.43.6, Denmark lineage, from pango-designation issue #315 AY.43.6 B.1.617.2.43.7 Alias of B.1.617.2.43.7, Brazil lineage, from pango-designation issue #378 AY.43.7 B.1.617.2.43.8 Alias of B.1.617.2.43.8, lineage in Netherlands, Suriname and other countries AY.43.8 B.1.617.2.43.9 Alias of B.1.617.2.43.9, Slovakia lineage AY.43.9 B.1.617.2.43 Alias of B.1.617.2.43, European lineage, from pango-designation issue #240 AY.43 B.1.617.2.44 Alias of B.1.617.2.44, USA lineage, from pango-designation issue #242 AY.44 B.1.617.2.45 Alias of B.1.617.2.45, South Africa lineage, from pango-designation issue #246 AY.45 B.1.617.2.46.1 Alias of B.1.617.2.46.1, USA lineage, from pango-designation issue #247 AY.46.1 B.1.617.2.46.2 Alias of B.1.617.2.46.2, Germany and Turkey lineage, from pango-designation issue #247 AY.46.2 B.1.617.2.46.3 Alias of B.1.617.2.46.3, Brazil lineage, from pango-designation issue #247 AY.46.3 B.1.617.2.46.4 Alias of B.1.617.2.46.4, USA lineage, from pango-designation issue #247 AY.46.4 B.1.617.2.46.5 Alias of B.1.617.2.46.5, UK lineage, from pango-designation issue #247 AY.46.5 B.1.617.2.46.6.1 Alias of B.1.617.2.46.6.1, Italy lineage, from pango-designation issue #369 AY.46.6.1 B.1.617.2.46.6 Alias of B.1.617.2.46.6, European lineage, from pango-designation issue #247 AY.46.6 B.1.617.2.46 Alias of B.1.617.2.46, Africa lineage, from pango-designation issue #247 AY.46 B.1.617.2.47 Alias of B.1.617.2.47, USA lineage, from pango-designation issue #254 AY.47 B.1.617.2.48 Alias of B.1.617.2.48, USA lineage AY.48 B.1.617.2.49 Alias of B.1.617.2.49, USA lineage AY.49 B.1.617.2.4 Alias of B.1.617.2.4, UK lineage, from pango-designation issue #180 AY.4 B.1.617.2.5.1 Alias of B.1.617.2.5.1, Portugal lineage AY.5.1 B.1.617.2.5.2 Alias of B.1.617.2.5.2, Portugal lineage AY.5.2 B.1.617.2.5.3 Alias of B.1.617.2.5.3, USA lineage AY.5.3 B.1.617.2.5.4 Alias of B.1.617.2.5.4, European lineage AY.5.4 B.1.617.2.5.5 Alias of B.1.617.2.5.5, European lineage, formally AY.97 AY.5.5 B.1.617.2.5.6 Alias of B.1.617.2.5.6, lineage in Saint Vincent and the Grenadines, Grenada and other countries AY.5.6 B.1.617.2.5.7 Alias of B.1.617.2.5.7, mainly found in Israel, from pango-designation issue #387 AY.5.7 B.1.617.2.50 Alias of B.1.617.2.50, Ireland lineage AY.50 B.1.617.2.51 Alias of B.1.617.2.51, European lineage AY.51 B.1.617.2.52 Alias of B.1.617.2.52, USA lineage AY.52 B.1.617.2.53 Alias of B.1.617.2.53, European lineage AY.53 B.1.617.2.54 Alias of B.1.617.2.54, USA lineage AY.54 B.1.617.2.55 Alias of B.1.617.2.55, lineage in Rwanda and other countries AY.55 B.1.617.2.56 Alias of B.1.617.2.56, USA lineage AY.56 B.1.617.2.57 Alias of B.1.617.2.57, Vietnam lineage AY.57 B.1.617.2.58 Alias of B.1.617.2.58, European lineage AY.58 B.1.617.2.59 Alias of B.1.617.2.59, Malaysia lineage AY.59 B.1.617.2.5 Alias of B.1.617.2.5, UK lineage, from pango-designation issue #180 AY.5 B.1.617.2.60 Alias of B.1.617.2.60, European lineage AY.60 B.1.617.2.61 Alias of B.1.617.2.61, Italy lineage AY.61 B.1.617.2.62 Alias of B.1.617.2.62, USA and Mexico lineage AY.62 B.1.617.2.63 Alias of B.1.617.2.63, Norway lineage AY.63 B.1.617.2.64 Alias of B.1.617.2.64, USA lineage AY.64 B.1.617.2.65 Alias of B.1.617.2.65, lineage in Bahrain and other countries AY.65 B.1.617.2.66 Alias of B.1.617.2.66, European lineage AY.66 B.1.617.2.67 Alias of B.1.617.2.67, USA lineage AY.67 B.1.617.2.68 Alias of B.1.617.2.68, European lineage AY.68 B.1.617.2.69 Alias of B.1.617.2.69, South Korea lineage AY.69 B.1.617.2.6 Alias of B.1.617.2.6, UK lineage, from pango-designation issue #180 AY.6 B.1.617.2.7.1 Alias of B.1.617.2.7.1, Denmark lineage AY.7.1 B.1.617.2.7.2 Alias of B.1.617.2.7.2, predominantly Italy lineage in multiple other European countries AY.7.2 B.1.617.2.70 Alias of B.1.617.2.70, European lineage AY.70 B.1.617.2.71 Alias of B.1.617.2.71, European lineage AY.71 B.1.617.2.72 Alias of B.1.617.2.72, European lineage AY.72 B.1.617.2.73 Alias of B.1.617.2.73, European lineage AY.73 B.1.617.2.74 Alias of B.1.617.2.74, Canada lineage AY.74 B.1.617.2.75.2 Alias of B.1.617.2.75.2, Philippines lineage AY.75.2 B.1.617.2.75.3 Alias of B.1.617.2.75.3, Japan lineage AY.75.3 B.1.617.2.75 Alias of B.1.617.2.75, USA and European lineage AY.75 B.1.617.2.76 Alias of B.1.617.2.76, predominantly Malaysia lineage AY.76 B.1.617.2.77 Alias of B.1.617.2.77, USA lineage AY.77 B.1.617.2.78 Alias of B.1.617.2.78, Germany and Turkey lineage AY.78 B.1.617.2.79 Alias of B.1.617.2.79, predominantly Malaysia lineage AY.79 B.1.617.2.7 Alias of B.1.617.2.7, UK lineage, from pango-designation issue #180 AY.7 B.1.617.2.80 Alias of B.1.617.2.80, European lineage AY.80 B.1.617.2.81 Alias of B.1.617.2.81, USA lineage AY.81 B.1.617.2.82 Alias of B.1.617.2.82, Fiji lineage AY.82 B.1.617.2.83 Alias of B.1.617.2.83, USA lineage AY.83 B.1.617.2.84 Alias of B.1.617.2.84, European lineage AY.84 B.1.617.2.85 Alias of B.1.617.2.85, Thailand lineage AY.85 B.1.617.2.86 Alias of B.1.617.2.86, Canada and USA lineage AY.86 B.1.617.2.87 Alias of B.1.617.2.87, UK lineage AY.87 B.1.617.2.88 Alias of B.1.617.2.88, lineage in Ghana and other countries AY.88 B.1.617.2.8 Alias of B.1.617.2.8, UK lineage, from pango-designation issue #180 AY.8 B.1.617.2.9.2.1 Alias of B.1.617.2.9.2.1, Canada lineage AY.9.2.1 B.1.617.2.9.2.2 Alias of B.1.617.2.9.2.2, Sweden lineage, from pango-designation issue #284 AY.9.2.2 B.1.617.2.9.2 Alias of B.1.617.2.9.2, European lineage AY.9.2 B.1.617.2.90 Alias of B.1.617.2.90, UK lineage AY.90 B.1.617.2.91.1 Alias of B.1.617.2.91.1, European lineage AY.91.1 B.1.617.2.91 Alias of B.1.617.2.91, lineage in South Africa, Namibia and other countries AY.91 B.1.617.2.92 Alias of B.1.617.2.92, European lineage AY.92 B.1.617.2.93 Alias of B.1.617.2.93, Canada lineage AY.93 B.1.617.2.94 Alias of B.1.617.2.94, European lineage AY.94 B.1.617.2.95 Alias of B.1.617.2.95, Maldives and European lineage AY.95 B.1.617.2.98.1.1 Alias of B.1.617.2.98.1.1, mainly found in Germany and Denmark, from pango-designation issue #604 AY.98.1.1 B.1.617.2.98.1 Alias of B.1.617.2.98.1, European lineage AY.98.1 B.1.617.2.98 Alias of B.1.617.2.98, UK lineage AY.98 B.1.617.2.99.1 Alias of B.1.617.2.99.1, Brazil lineage AY.99.1 B.1.617.2.99.2 Alias of B.1.617.2.99.2, Brazil lineage AY.99.2 B.1.617.2.99 Alias of B.1.617.2.99, South Africa and Nigeria lineage AY.99 B.1.617.2.9 Alias of B.1.617.2.9, UK lineage, from pango-designation issue #180 AY.9 B.1.1.318.1 Alias of B.1.1.318.1, Canada lineage, from pango-designation issue #171 AZ.1 B.1.1.318.2.1 Alias of B.1.1.318.2.1, Switzerland lineage, from pango-designation issue #171 AZ.2.1 B.1.1.318.2 Alias of B.1.1.318.2, predominantly Greece lineage, from pango-designation issue #171 AZ.2 B.1.1.318.3 Alias of B.1.1.318.3, USA lineage, from pango-designation issue #171 AZ.3 B.1.1.318.4 Alias of B.1.1.318.4, Ireland lineage, from pango-designation issue #171 AZ.4 B.1.1.318.5 Alias of B.1.1.318.5, Mauritius lineage, from pango-designation issue #171 AZ.5 B.1.1.318.6 Alias of B.1.1.318.6, Canada lineage, from pango-designation issue #171 AZ.6 One of the two original haplotypes of the pandemic (A and B). Many sequences originating from China and many global exports; including to South East Asia Japan South Korea Australia the USA and Europe represented in this lineage A Denmark lineage B.1.1.100 Indian lineage B.1.1.101 England B.1.1.107 UK lineage B.1.1.109 European lineage B.1.1.10 Peru lineage B.1.1.110 African lineage (Zambia, Zimbabwe) B.1.1.111 Netherlands B.1.1.112 Western USA B.1.1.113 Wales B.1.1.114 UK lineage, now contains former B.1.1.235 B.1.1.115 USA lineage B.1.1.116 South African some Argentina, now contains B.1.1.252 B.1.1.117 US Lineage (TX) B.1.1.118 Northern Ireland lineage B.1.1.119 UK lineage B.1.1.120 Canadian lineage B.1.1.121 Netherlands B.1.1.122 UK lineage B.1.1.123 UK lineage B.1.1.125 Russian lineage B.1.1.127 US lineage B.1.1.128 Russian lineage B.1.1.129 England B.1.1.12 England B.1.1.130 US Lineage B.1.1.132 UAE/ European lineage B.1.1.133 UK B.1.1.134 US B.1.1.135 Australian lineage B.1.1.136 UK lineage B.1.1.137 UK lineage B.1.1.138 USA B.1.1.139 UK B.1.1.13 Russian, Latvian, Netherlands B.1.1.141 Australian lineage B.1.1.142 Swiss lineage B.1.1.144 UK lineage B.1.1.145 England B.1.1.147 US lineage B.1.1.148 English Lineage B.1.1.149 Scotland B.1.1.14 Russian B.1.1.152 Northern European Lineage B.1.1.153 UK lineage B.1.1.154 English B.1.1.155 Canadian lineage B.1.1.157 USA lineage B.1.1.158 European lineage B.1.1.159 UK/ Luxembourg lineage B.1.1.15 Northern Ireland lineage B.1.1.160 Saudi lineage B.1.1.161 England, Russia, Latvia B.1.1.162 Russian lineage B.1.1.163 UK B.1.1.164 England B.1.1.165 UK lineage B.1.1.166 UK lineage B.1.1.168 USA lineage B.1.1.169 Wales with European base B.1.1.16 UK/Denmark lineage B.1.1.170 UK lineage B.1.1.171 USA B.1.1.172 USA lineage B.1.1.174 Bangladesh B.1.1.175 Canadian lineage B.1.1.176 Texas B.1.1.177 England B.1.1.178 Icelandic B.1.1.17 USA lineage B.1.1.180 Used to be just Turkey, now lots of Canadian B.1.1.181 USA B.1.1.182 Russia, some B.1.1.129 B.1.1.184 Netherlands lineage B.1.1.185 Southern USA B.1.1.186 UK and italy B.1.1.187 European lineage B.1.1.189 Wales lineage B.1.1.190 Denmark B.1.1.191 USA B.1.1.192 England B.1.1.193 England B.1.1.194 UK lineage B.1.1.196 UK lineage B.1.1.197 UK/ Luxembourg lineage B.1.1.198 England B.1.1.1 UK B.1.1.200 India and Singapore and Texas B.1.1.201 Italy B.1.1.202 England and Ecuador B.1.1.203 UK lineage B.1.1.204 USA lineage B.1.1.205 USA B.1.1.207 UK B.1.1.208 Netherlands B.1.1.209 USA (TX) B.1.1.210 England B.1.1.213 Japan B.1.1.214 Predominantly Indian lineage with exports elsewhere B.1.1.216 UK lineage B.1.1.217 European lineage B.1.1.218 Northern Europe (UK, Denmark, Norway, Sweden) B.1.1.219 UK lineage B.1.1.220 Belgian lineage B.1.1.221 USA/Mexico B.1.1.222 Denmark (some German) B.1.1.224 USA B.1.1.225 USA lineage B.1.1.226 England B.1.1.227 USA (WA) B.1.1.228 USA lineage B.1.1.231 Northern Europe (UK, Germany, Denmark, Belgium, NL) B.1.1.232 England, Ireland, Northern Ireland, Northern Europe B.1.1.234 UK B.1.1.236 Wales B.1.1.237 USA lineage B.1.1.239 UK lineage B.1.1.240 European lineage B.1.1.241 Gambia and Switzerland B.1.1.242 Eastern Europe, Central Europe, UK B.1.1.243 USA lineage B.1.1.244 Welsh Lineage B.1.1.249 UK and US B.1.1.251 UK B.1.1.253 Mostly South Africa B.1.1.254 UK lineage B.1.1.255 UK lineage B.1.1.256 Mostly UK lineage with other northern european plus one singapore B.1.1.257 USA (TX) B.1.1.258 Bangladesh Lineage B.1.1.25 Swedish/ Danish/ Faroe Islands lineage B.1.1.261 UK lineage B.1.1.262 UAE lineage (~95%) B.1.1.263 USA lineage B.1.1.265 Czech lineage B.1.1.266 Irish lineage B.1.1.267 USA lineage B.1.1.268 European lineage B.1.1.269 USA Lineage B.1.1.26 UK lineage B.1.1.270 German and Austrian lineage B.1.1.271 Denmark B.1.1.272 South african lineage, previously part of B.1.1.56 B.1.1.273 England, Thailand, Russia, USA B.1.1.274 DRC with some UAE and England B.1.1.275 European lineage B.1.1.277 English Lineage B.1.1.279 Oman Lineage, some UAE B.1.1.27 Lithuanian lineage B.1.1.280 Netherlands lineage B.1.1.282 Japan B.1.1.283 Japan B.1.1.284 Japan/ USA lineage B.1.1.285 UK B.1.1.286 Danish Lineage B.1.1.288 UK lineage B.1.1.289 Brazil mostly, absorbed B.1.1.94 and B.1.1.143 B.1.1.28 USA lineage B.1.1.290 USA Lineage B.1.1.291 Russian and UK lineage B.1.1.294 UK lineage B.1.1.296 Central Europe lineage B.1.1.297 Denmark Lineage B.1.1.298 UK lineage B.1.1.299 Wales lineage, formerly temporarily assigned B.1.1.439 due to an error (see designation issue 50) B.1.1.29 UK lineage B.1.1.300 UK lineage B.1.1.301 Swedish lineage B.1.1.302 UK B.1.1.303 UK/USA lineage B.1.1.304 Pan European B.1.1.305 Big indian lineage, exports to Zambia, Bahrain and Canada B.1.1.306 UK lineage B.1.1.307 UK B.1.1.308 Now all England, was US, so probably split from something B.1.1.309 Lithuanian B.1.1.30 Northern Irish with English root B.1.1.310 Huge UK lineage B.1.1.311 Jordan lineage B.1.1.312 Previously D.1, UK/ UAE lineage B.1.1.315 International lineage with spike mutation Q677H, parent of lineage R.1 and R.2 which have additional mutations including E484K mutation B.1.1.316 Russian lineage B.1.1.317 Lineage circulating in multiple countries with a number of variants of concern (Spike D614G, Spike D796H, Spike E484K, Spike P681H, Spike T95I, Spike Y144del). pango-designation issue #15 B.1.1.318 Russian/Serbian Lineage B.1.1.319 Russian lineage B.1.1.31 USA lineage B.1.1.320 Mexico/Southwest USA B.1.1.322 Northern Europe, split from B.1.1.257 B.1.1.323 Chilean Lineage B.1.1.324 Eastern Europe plus Belgium and Denmark B.1.1.325 Indian Lineage B.1.1.326 Swiss Lineage B.1.1.327 Costa Rica and Florida B.1.1.328 Pan-US B.1.1.329 Chinese Lineage B.1.1.330 Austrian lineage B.1.1.331 Brazilian Lineage B.1.1.332 Norwegian Lineage B.1.1.333 USA and Mexico B.1.1.334 USA and Canada B.1.1.335 Russian lineage B.1.1.336 US B.1.1.337 German lineage B.1.1.338 UAE and England B.1.1.339 Brazilian B.1.1.33 Indian Lineage B.1.1.340 UK lineage B.1.1.341 USA B.1.1.342 Canadian lineage B.1.1.343 Mexico, Texas B.1.1.344 USA lineage B.1.1.345 Denmark lineage B.1.1.346 Central Europe B.1.1.347 South America & USA B.1.1.348 Russia, one "Congo" B.1.1.349 South African lineage B.1.1.34 Latvian lineage B.1.1.350 USA, England, Finland, Denmark B.1.1.351 USA lineage B.1.1.352 UAE, Israel, Australia B.1.1.353 Singapore, malaysia, India, UAE, England B.1.1.354 England, Northern Europe B.1.1.355 Texas B.1.1.356 USA lineage B.1.1.357 USA B.1.1.358 Ghana and Denmark B.1.1.359 Wales B.1.1.360 England B.1.1.361 USA B.1.1.362 Wales B.1.1.363 Russia, S Korea, England B.1.1.364 England B.1.1.365 UAE B.1.1.366 USA B.1.1.367 USA and Canada B.1.1.368 England B.1.1.369 England, USA, Russia, Germany B.1.1.370 Saudi Arabia to Romania to Western Europe, contains B.1.1.161 at the base B.1.1.371 England B.1.1.372 Russia, split from B.1.1.31 B.1.1.373 Balkans, Finland B.1.1.374 Mozambique, was C.1.1 B.1.1.375 USA (California) B.1.1.376 Denmark B.1.1.377 UK and Brazil B.1.1.378 Wales B.1.1.379 UK lineage B.1.1.37 USA B.1.1.380 Peruvian B.1.1.381 South African lineage B.1.1.382 South African B.1.1.383 Swiss Lineage B.1.1.384 German Lineage B.1.1.385 South African lineage B.1.1.386 South African lineage B.1.1.387 Columbian lineage B.1.1.388 Costa Rica lineage B.1.1.389 Wales B.1.1.38 UAE lineage B.1.1.391 USA lineage B.1.1.392 Brazilian lineage B.1.1.393 Portugal lineage B.1.1.394 UK lineage, previously part of B.1.1.279 B.1.1.395 Russian lineage, some previously B.1.1.184 B.1.1.396 Predominantly Russia, includes some previous B.1.1.67 and H.1 sequences B.1.1.397 USA/ Indonesian lineage B.1.1.398 Irish lineage B.1.1.399 Mostly Switzerland with lots of other countries B.1.1.39 England Lineage B.1.1.3 Spain lineage B.1.1.400 Portugal lineage B.1.1.401 USA (Texas), split from B.1.1.177 B.1.1.402 USA B.1.1.403 Ghana, Burkina Faso, Luxembourg, Germany B.1.1.404 Germany lineage B.1.1.405 Spain, UK, Italy B.1.1.406 Mostly Russia B.1.1.407 UK lineage B.1.1.408 UAE, Israel, Saudi Arabia B.1.1.409 South African lineage B.1.1.40 Portugal lineage B.1.1.410 Ecuador and US B.1.1.411 South African lineage B.1.1.412 Europe, Turkey, Iran B.1.1.413 Indian lineage B.1.1.414 Austrian lineage B.1.1.415 USA lineage B.1.1.416 Canada lineage B.1.1.417 USA lineage B.1.1.418 UK lineage, includes some formally B.1.1.193 sequences B.1.1.419 England lineage B.1.1.41 Western Europe, USA B.1.1.420 Portuguese lineage B.1.1.421 Lithuanian lineage B.1.1.422 USA lineage B.1.1.423 Russia lineage, contains some formally B.1.1.167 sequences B.1.1.424 England and Denmark B.1.1.425 USA lineage B.1.1.426 Russian Lineage B.1.1.427 Switzerland and North Macedonia B.1.1.428 Latvia and Finland B.1.1.429 North Macedonia B.1.1.430 Australia and Canada B.1.1.431 US and Mexico B.1.1.432 Denmark and Switzerland, some B.1.1.281 B.1.1.433 Mostly US lineage with some UK and Canada (was B.1.1.304) B.1.1.434 Russian B.1.1.435 Belgium lineage B.1.1.436 USA lineage B.1.1.437 Swedish lineage B.1.1.438 Scottish lineage B.1.1.43 US and Mexico B.1.1.440 USA lineage B.1.1.441 Argentinian B.1.1.442 South African (was B.1.1.117) B.1.1.444 Switzerland lineage B.1.1.445 Sweden lineage B.1.1.446 USA lineage B.1.1.447 South African (was B.1.1.54) B.1.1.448 Russia lineage B.1.1.449 Pan-European, big scottish section B.1.1.44 USA lineage B.1.1.450 Norway lineage B.1.1.451 Russia lineage B.1.1.452 US B.1.1.453 South African B.1.1.456 Swedish lineage B.1.1.458 South African lineage (some were part of Belgian lineage B.1.1.75 B.1.1.459 UK B.1.1.45 US TX lineage B.1.1.461 United Arab Emirates B.1.1.462 US CA lineage B.1.1.463 US lineage B.1.1.464 Japanese lineage B.1.1.465 Gambian lineage B.1.1.466 US lineage (NY) B.1.1.467 Mostly India B.1.1.46 Switzerland and other Northern Europe B.1.1.47 US Lineage B.1.1.480 Russian Lineage B.1.1.481 US Lineage B.1.1.482 Belgian lineage B.1.1.483 Nigerian Lineage B.1.1.484 Ghanaian Lineage B.1.1.485 US Lineage B.1.1.486 UK and Nigerian Lineage B.1.1.487 Japan B.1.1.48 Wales B.1.1.49 English lineage B.1.1.4 UAE lineage B.1.1.500 Mainly Russian B.1.1.506 South African Lineage (was B.1.1.254) B.1.1.507 Israel and Palestine B.1.1.50 US/Mexico B.1.1.512 US lineage (NY) B.1.1.513 US lineage B.1.1.514 German lineage B.1.1.515 Costa Rica lineage B.1.1.516 USA lineage B.1.1.517 USA/ Mexico lineage B.1.1.518 USA/ Mexico lineage B.1.1.519 UK B.1.1.51 European lineage B.1.1.521 Belgium lineage B.1.1.522 Lineage in multiple countries, predominantly Russia, from pango-designation issue #69 B.1.1.523 Predominantly Russia lineage, from pango-designation issue #85 B.1.1.524 Predominantly Russia lineage, from pango-designation issue #85 B.1.1.525 India lineage, from pango-designation issue #91, previously designated B.1.624 B.1.1.526 South Africa lineage, from pango-designation issue #177 B.1.1.528 South Africa and Botswana lineage, from pango-designation issue #343 B.1.1.529 South Africa B.1.1.52 South Africa B.1.1.53 South African Lineage B.1.1.54 English lineage B.1.1.55 South African lineage B.1.1.56 South African lineage, a few English sequences, one Zimbabwe B.1.1.57 European lineage B.1.1.58 UK lineage B.1.1.59 European lineage B.1.1.5 USA lineage B.1.1.61 South African lineage B.1.1.62 Hong Kong lineage B.1.1.63 England and South Africa B.1.1.67 European Lineage B.1.1.70 Dutch, Central Europe B.1.1.71 US lineage B.1.1.72 NI & Ireland Lineage B.1.1.74 Belgian lineage B.1.1.75 US Lineage B.1.1.77 UK lineage of concern, associated with the N501Y mutation. More information can be found at cov-lineages.org/global_report.html B.1.1.7 Wales lineage B.1.1.82 Northern Irish lineage B.1.1.83 South African B.1.1.84 UK lineage B.1.1.86 Hungarian lineage B.1.1.87 Portugal lineage B.1.1.88 England B.1.1.89 England B.1.1.8 Sweden and Denmark lineage B.1.1.90 Sweden B.1.1.91 English lineage B.1.1.92 US Lineage B.1.1.93 English lineage B.1.1.95 England B.1.1.97 US lineage B.1.1.98 Mostly South Africa B.1.1.99 USA B.1.103 England B.1.104 England B.1.105 USA B.1.106 USA B.1.108 Chilean/ US lineage B.1.110.1 UK lineage B.1.110.2 USA lineage B.1.110.3 Chilean/ US and Australia lineage B.1.110 South/ Central American lineage (mostly Trinidad and Colombia, an a small cluster from Norwich) B.1.111 USA/UT B.1.112 Indian lineage B.1.113 Israel and UK B.1.115 USA lineage B.1.116 UK lineage B.1.117 Danish B.1.118 USA lineage B.1.119 Wales lineage B.1.120 USA/WA B.1.124 USA (MN) lineage B.1.126 Denmark B.1.127 Canada, Switzerland and DRC B.1.128 Luxembourg lineage (also England, Belgium etc.) B.1.12 European lineage B.1.131 USA lineage B.1.134 USA lineage B.1.137 USA lineage B.1.139 UK lineage B.1.13 South African lineage B.1.140 Wales lineage B.1.142 Indian lineage B.1.143 Indian lineage B.1.145 Swiss lineage B.1.146 Canadian lineage B.1.147 DRC lineage B.1.149 USA lineage (CA) B.1.14 UK lineage B.1.151 English lineage with some Australian, New Zealand and European sequences B.1.153 UK/ Spanish lineage B.1.157 Finland lineage B.1.158 French lineage B.1.159 Switzerland B.1.160.10 Switzerland B.1.160.11 Switzerland B.1.160.12 Netherlands lineage B.1.160.13 Switzerland B.1.160.14 Mostly Switzerland B.1.160.15 Mostly Switzerland B.1.160.16 Denmark B.1.160.17 Mayotte B.1.160.18 Switzerland B.1.160.19 Switzerland B.1.160.20 Luxembourg B.1.160.21 Switzerland, Germany, Austria B.1.160.22 England B.1.160.23 Denmark B.1.160.24 French Guiana B.1.160.25 Mostly Switzerland, a little Europe B.1.160.26 Mayotte B.1.160.27 Belgium and Luxembourg B.1.160.28 Switzerland B.1.160.29 Switzerland B.1.160.30 Switzerland B.1.160.31 Switzerland B.1.160.32 Was part of B.1.160.7 but this is now split on tree. English lineage last seen 2020-11-18 in uk, but long branch to a recent French sample sticking out B.1.160.33 English Lineage B.1.160.7 Denmark B.1.160.8 Switzerland B.1.160.9 Large European lineage, sequences from BeNeLuX, Denmark, Switzerland, Hungary and UK. B.1.160 USA B.1.161 USA lineage B.1.162 USA B.1.163 Eastern Europe B.1.164 England B.1.165 USA lineage B.1.166 Canada, England B.1.167 Scottish lineage B.1.168 USA, some previously B.1.333.1 B.1.169 Egypt UAE B.1.170 England B.1.173 England B.1.177.10 Scotland mostly, some England B.1.177.11 Danish B.1.177.12 Danish/ Norway lineage B.1.177.14 English Welsh lineage B.1.177.15 UK lineage B.1.177.16 UK, merged with B.1.177.13 B.1.177.17 England, some Wales, parent is mainland Europe B.1.177.18 England, some Wales B.1.177.19 England B.1.177.20 Denmark B.1.177.21 Swiss lineage B.1.177.23 Danish lineage, contains some previous B.1.177.1 B.1.177.24 Gibraltar lineage B.1.177.25 UK lineage B.1.177.26 Danish B.1.177.27 Swiss lineage B.1.177.28 Spain B.1.177.29 English lineage B.1.177.2 England B.1.177.30 Swiss lineage B.1.177.31 Swiss and Portuguese mostly B.1.177.32 Mostly italian, some swiss, some english B.1.177.33 Dutch B.1.177.34 Danish, some Israel more recently B.1.177.35 Dutch B.1.177.36 Belgian B.1.177.37 Dutch B.1.177.38 Ireland andNorthern Ireland B.1.177.39 Welsh and English lineage B.1.177.3 Dutch B.1.177.40 Danish and swedish B.1.177.41 Danish B.1.177.42 Swiss, then into Germany and Austria B.1.177.43 Swiss mostly B.1.177.44 Iceland B.1.177.45 Sweden and Denmark B.1.177.46 England B.1.177.47 UK lineage B.1.177.48 Spanish lineage B.1.177.49 UK lineage B.1.177.4 Netherlands / Germany B.1.177.50 European lineage B.1.177.51 European lineage B.1.177.52 UK lineage B.1.177.53 UK lineage B.1.177.54 England and Ireland B.1.177.55 UK lineage B.1.177.56 UK lineage B.1.177.57 UK B.1.177.58 Ireland B.1.177.59 UK, mostly Scotland B.1.177.5 Northern Europe, mostly Lithuania B.1.177.60 Spain B.1.177.61 Germany, Switzerland, Netherlands B.1.177.62 Wales B.1.177.63 Ireland B.1.177.64 Wales B.1.177.65 Irish lineage B.1.177.66 Irish lineage B.1.177.67 Irish lineage B.1.177.68 UK lineage B.1.177.69 Wales lineage B.1.177.6 Danish lineage B.1.177.70 Swiss lineage B.1.177.71 Portuguese lineage B.1.177.72 Netherlands lineage B.1.177.73 Netherlands, Spain, UK B.1.177.74 Italian lineage B.1.177.75 Danish B.1.177.76 Benelux + Denmark B.1.177.77 French lineage B.1.177.78 Wales lineage B.1.177.7 Scandinavian lineage B.1.177.80 Large European lineage B.1.177.81 Scandinavian lineage B.1.177.82 Italian lineage B.1.177.83 UK lineage B.1.177.84 Portuguese lineage B.1.177.85 German and Danish lineage B.1.177.86 UK lineage B.1.177.87 Italian lineage from pango-designation issue #19 B.1.177.88 Switzerland lineage B.1.177.89 Wales lineage B.1.177.8 UK lineage B.1.177.9 Major mostly European lineage, result of opening borders summer 2020 B.1.177 DRC lineage B.1.178 Denmark B.1.179 Romanian lineage B.1.180 USA lineage B.1.181 Spanish lineage B.1.182 India B.1.184 Polish lineage B.1.187 USA (OR) lineage B.1.188 USA/Mexico B.1.189 Netherlands lineage B.1.190 Equatorial Guinea B.1.192 USA B.1.194 UAE B.1.195 UK lineage B.1.198 USA B.1.199 European lineage with 3 clear SNPs `28881GA`,`28882GA`,`28883GC` B.1.1 UK lineage B.1.201 Panama/Costa Rica B.1.203 Peruvian B.1.205 USA B.1.206 French lineage B.1.208 Indian lineage B.1.210 Belgium/ Luxembourg lineage B.1.211 South American lineage B.1.212 Polish lineage B.1.213 Congo/ France lineage B.1.214.1 Lineage from Belgium with a number of key spike mutations and a 9bp spike insertion. B.1.214.2 France, Belgium and Mayotte lineage. B.1.214.3 Danish lineage. B.1.214.4 DRC/ Congo lineage B.1.214 Scottish lineage B.1.215 Swiss lineage B.1.218 Suriname lineage B.1.219 Curacao B.1.22.1 European lineage B.1.220 UK lineage B.1.221.1 German lineage B.1.221.2 Danish lineage B.1.221.3 Belgium/ Luxembourg lineage B.1.221.4 European lineage B.1.221 Scottish lineage B.1.222 UK lineage B.1.223 Austrian lineage B.1.224 UK lineage B.1.225 Sweden B.1.227 UK lineage B.1.229 Netherlands lineage B.1.22 UK lineage B.1.231 USA/ Scottish lineage B.1.232 USA lineage B.1.233 USA lineage B.1.234 UK B.1.235 Swiss lineage B.1.236 South african lineage B.1.237 UK lineage B.1.238 USA lineage B.1.239 New Zealand / Australia B.1.23 Curacao and Aruba B.1.240.1 England B.1.240.2 USA B.1.240 USA lineage B.1.241 Norway lineage B.1.242 Emergent lineage in Arizona with a number of defining amino acid mutations, including S:E484K and S:V213G. Described in Skidmore et al 2021. https://www.medrxiv.org/content/10.1101/2021.03.26.21254367v1.full.pdf. B.1.243.1 Mexico lineage, from pango-designation issue #169 B.1.243.2 USA lineage B.1.243 USA/CA B.1.245 India B.1.247 Scotland B.1.248 England B.1.249 England B.1.250 England B.1.251 Wales B.1.252 Scotland B.1.254 Scottish lineage B.1.256 Scottish lineage B.1.258.10 Danish lineage B.1.258.11 UK lineage B.1.258.12 Italian lineage B.1.258.14 Danish lineage B.1.258.15 Swiss/ Danish lineage B.1.258.16 European lineage B.1.258.17 Netherlands lineage B.1.258.18 Danish lineage B.1.258.19 Luxembourg lineage B.1.258.20 Netherlands lineage B.1.258.21 Swedish lineage B.1.258.22 USA (UT) lineage B.1.258.23 Italian lineage B.1.258.24 Irish lineage (has sub-lineage G.1) B.1.258.2 UK lineage B.1.258.3 UK lineage B.1.258.4 UK lineage B.1.258.5 UK lineage B.1.258.6 UK lineage B.1.258.7 Danish lineage B.1.258.9 UK lineage B.1.258 Saudi Arabian lineage B.1.260 Danish B.1.263 Russia, Germany, Switzerland, Austria. Was B.1.412 B.1.264.1 USA (UT) B.1.264 USA lineage B.1.265 USA (CA) B.1.267 USA B.1.268 Canadian lineage B.1.270 French lineage B.1.273 Utah lineage B.1.274 USA lineage B.1.276 European lineage B.1.277 Canadian lineage B.1.279 USA B.1.280 Bahrain lineage B.1.281 UK lineage B.1.282 USA - Texas B.1.284 USA - Texas B.1.285 USA lineage B.1.287 USA - Arizona B.1.289 Costa Rica B.1.291 Gambia B.1.292 USA B.1.293 USA - WI and MN B.1.294 USA (north east) B.1.298 USA B.1.2 USA , some B.1.2 merged in B.1.301 USA, New England B.1.302 USA B.1.304 USA, mostly TX B.1.305 USA lineage B.1.306 Northern USA and Canada B.1.308 USA lineage B.1.309 Netherlands B.1.310 USA lineage B.1.311 USA (removed the polytomy at the base of the lineage) B.1.313 North American lineage B.1.314 USA lineage B.1.315 Canada lineage B.1.316 USA (FL) B.1.318 USA and Australia B.1.319 USA B.1.320 Belgium, England B.1.321 USA (NY) B.1.323 USA B.1.324 USA (TX) B.1.325 USA (TX) B.1.326 USA B.1.328 German B.1.329 USA (MN) B.1.330 USA B.1.332 USA lineage WA B.1.333 USA lineage B.1.334 USA lineage B.1.335 USA lineage B.1.336 USA lineage B.1.337 Australia B.1.338 USA lineage B.1.340 USA lineage B.1.341 Sweden B.1.342 Denmark B.1.343 USA (CO) B.1.344 USA lineage B.1.346 USA lineage B.1.348 USA lineage B.1.349 England B.1.350.1 Canada B.1.350 Sublineage of B.1.351 circulating in Botswana B.1.351.1 Sublineage of B.1.351 circulating in Mayotte B.1.351.2 Sublineage of B.1.351 predominantly in Bangladesh and Singapore with exports elsewhere B.1.351.3 Sublineage of B.1.351 in Spain, from pango-designation issue #211 B.1.351.5 Lineage of concern detected in South Africa B.1.351 Denmark B.1.354 USA lineage B.1.355 European, mostly dutch and spanish, some north american B.1.356 USA (OR,WA,HI) B.1.357 Danish lineage B.1.358 USA lineage B.1.359 Wales lineage B.1.35 Jordan/Saudi Arabia (single recent record from USA) B.1.36.10 England B.1.36.12 SE Asia B.1.36.16 UK lineage B.1.36.17 Canadian lineage B.1.36.18 Oceana B.1.36.19 European/Denmark B.1.36.1 Mainly Scotland B.1.36.20 Norway lineage B.1.36.21 Lineage with sequences majoritively from Finland B.1.36.22 UK B.1.36.23 England with Global records B.1.36.24 Denmark B.1.36.25 Canada/USA B.1.36.26 Hong Kong lineage, initially associated with travellers from Nepal. Epidemiologically and phylogenetically supported. B.1.36.27 UK B.1.36.28 India B.1.36.29 UK B.1.36.2 UK/Global B.1.36.31 Denmark B.1.36.33 UK B.1.36.34 European/Switzerland B.1.36.35 Canada B.1.36.36 Canada B.1.36.37 Canada/UK B.1.36.38 UK B.1.36.39 UK (reassigned from Oman lineage) B.1.36.7 Predominantly Indian lineage with global records (inc. Canada) B.1.36.8 UK B.1.36.9 USA B.1.360 USA lineage (split from whatever Chris reassigns B.1.361 to) B.1.361 UK lineage B.1.362.1 UK lineage B.1.362.2 Israel lineage B.1.362 USA lineage B.1.363 USA lineage B.1.366 European lineage (mostly France and England) B.1.367 Canada lineage B.1.369.1 USA/ New Zealand lineage B.1.369 Global many sublineages (see below) B.1.36 USA lineage, cleaned up a lot in release 2021-01-20 B.1.370 Danish/ USA lineage, previously part of B.1.21 B.1.371 Danish lineage B.1.372 USA lineage (circulating in Connecticut with the 69-70del, which leads to SGTF. However, they express 484E and 501N in their spike proteins.) B.1.375 USA and England B.1.377 USA B.1.378 UK B.1.379 USA lineage B.1.37 Rwanda / Uganda B.1.380 South Africa B.1.381 USA B.1.382 Wales B.1.383 USA lineage B.1.384 USA B.1.385 French lineage B.1.387 Cote d'Ivoire lineage B.1.388 England + Europe B.1.389 USA B.1.38 USA B.1.390 UK B.1.391 Uganda B.1.393 Wales B.1.395 USA lineage B.1.396 USA lineage B.1.397 European lineage B.1.398 USA B.1.399 Denmark B.1.39 USA lineage B.1.3 USA lineage, from pango-designation issue #94 B.1.400.1 USA lineage B.1.400 USA lineage B.1.401 USA lineage B.1.402 USA lineage B.1.403 USA lineage B.1.404 USA lineage B.1.405 Germany/ UK lineage B.1.406 UK lineage B.1.407 UK/ Romanian lineage B.1.408 USA lineage B.1.409 Scotland lineage B.1.40 Sri Lankan lineage B.1.411 USA B.1.413 Predominantly Mexico lineage, from pango-designation issue #157 B.1.415.1 USA B.1.415 European lineage within diversity of B.1.416. Previously assigned E.1 B.1.416.1 Senegal/ Gambian lineage, reassigned from B.1.5.12 B.1.416 South African lineage B.1.417 Scottish lineage B.1.418 Colombian lineage B.1.420 USA lineage B.1.421 Canada mostly B.1.422 USA lineage B.1.423 USA lineage B.1.424 USA lineage B.1.425 USA (UT) lineage B.1.426 USA lineage (CA) B.1.427 Iraq B.1.428.1 Tunisia, England, France B.1.428.2 UAE, Jordan B.1.428.3 Danish lineage (amalgam of Danish sequences from B.1.358, B.1.288, B.1.262) B.1.428 Colorado lineage from pango-designation issue #37 B.1.429.1 A lineage predominantly circulating in California but with exports to other countries. Characterised by the spike L452R mutation but also has spike:W152C orf1ab:D5584Y and N:T205I. B.1.429 Scotland B.1.431 USA lineage B.1.432 USA lineage B.1.433 Australian lineage (previously a couple part of B.1.25, B.1.295) B.1.434 USA - UT B.1.435 USA lineage reassigned from previous tree B.1.436 USA - FL B.1.437 Canada lineage B.1.438.1 Mayotte and Reunion lineage B.1.438.2 USA lineage B.1.438.3 USA lineage B.1.438.4 Lineage circulating in multiple countries B.1.438 USA B.1.439 Global lineage (inc. merge of B.1.274) B.1.441 USA B.1.442 USA lineage B.1.443 USA Utah lineage B.1.444 USA (AZ) B.1.445 USA, some B.1.333 B.1.446 USA lineage B.1.448 Wales lineage B.1.44 USA (TX) B.1.450 USA lineage (VA), previously B.1.328 and B.1.317 B.1.451 USA (CA) B.1.452 USA (CA and TX) B.1.453 SE Asian (reassigned) B.1.456 India B.1.458 Indonesia B.1.459 UK lineage B.1.460 UK/Nigeria B.1.462 Finland B.1.463 UK, contains B.1.466 which is reassigned (see below) B.1.465 USA/UAE B.1.466.1 Indonesia B.1.466.2 Global lineage containing two new sublineages (see below) B.1.466 Nigeria/Switzerland B.1.467 Indonesia/Singapore. Seq names misassigned in original file B.1.468 European (Turkey, Denmark, UK) B.1.469 Indonesia/Singapore B.1.470 UK with global representation B.1.471 USA lineage B.1.473 Denmark/ Luxembourg lineage B.1.474 German lineage B.1.475 West African lineage B.1.476 USA lineage B.1.478 USA lineage B.1.479 England, Australia, Sweden, Norway B.1.480 France/ West African lineage B.1.482 USA lineage B.1.483 USA lineage B.1.485 USA (MA) B.1.486 USA - TX B.1.487 Denmark and Sweden B.1.488 Wales and Norway B.1.489 Finland. B.1.490 England B.1.491 USA - Colorado B.1.492 USA (FL) B.1.493 USA (Split from B.1.3) B.1.494 USA (Split from B.1.3) B.1.495 USA (could be dissolved - sequences jumped out, previously split from B.1.3) B.1.496 South Korea (was B.1.3.1) B.1.497 USA (Split from B.1.3) B.1.498 USA lineage B.1.499.1 Mostly Argentina, some Spain, NL, Hong Kong (was B.1.3.2) B.1.499 USA (split from B.1.3) B.1.500 USA (Split from B.1.3) B.1.501 USA (Split from B.1.3) B.1.502 USA (Split from B.1.3) B.1.503 Israel and England (was B.1.3.3) B.1.504 Israel and england (was B.1.3.4) B.1.505 USA (NY, split from B.1.3) B.1.506 USA (MI, NY, split from B.1.3) B.1.507 USA (NY, AZ, split from B.1.3) B.1.508 USA (split from B.1.3, mostly FL) B.1.509 Iceland, Sweden, North America (could be dissolved) B.1.510 USA lineage B.1.511 Northern Europe B.1.513 USA (Utah) B.1.515 USA (AZ and NM) B.1.516 Australia B.1.517.1 USA (mostly AZ) B.1.517 USA B.1.518 USA, Canada, England, Germany etc. (could be dissolved / reassigned to B.1) B.1.520 USA lineage B.1.521 UK/Australia B.1.523 Malaysian lineage B.1.524 International lineage with E484K, del69-70 among other defining mutations. B.1.525 A lineage predominantly circulating in New York but with a few exports to other countries. Characterised by spike mutations T95I and D253G, plus others. The most frequent spike mutation pattern is L5F T95I D253G E484K D614G A701V, with a smaller fraction having S477N instead of E484K. Spike mutation E484K is present in about half of this lineage (as of 2021-02-10) - Very possible not all new additions carry T95I and D253G (someone should check this, e.g. for USA/NY-Wadsworth-21008455-01/2021 and Aruba/AW-RIVM-11403/2021) B.1.526 Czech Republic/ Ukraine lineage B.1.527 Moroccan lineage B.1.528 French lineage B.1.529 Kenya B.1.530 England B.1.531 England B.1.532 Saudi Arabia B.1.533 Denmark B.1.534 Australia B.1.535 Denmark B.1.536 India B.1.537 India B.1.538 USA B.1.539 India B.1.540 USA lineage B.1.541 Spain B.1.542 USA B.1.543 Congo/ Cameroon/ USA lineage B.1.544 New Zealand B.1.545 USA B.1.546 Canada B.1.547 India B.1.548 Kenya + England B.1.549 USA lineage B.1.550 USA lineage B.1.551 North American B.1.552 USA (UT) lineage B.1.554 Sweden B.1.555 USA lineage B.1.556 Northern Ireland B.1.557 USA/ Mexico lineage B.1.558 Scotland B.1.559 India B.1.560 USA - contains previous B.1.404 B.1.561 England base, to Ireland B.1.562 UK lineage B.1.563 Canada lineage B.1.564.1 USA lineage, split out from B.1.369 B.1.564 USA - contains previous B.1.139 B.1.565 USA - Arizona and Texas B.1.566 USA lineage, formally part of B.1.2 B.1.567 USA lineage, split out from B.1.361 B.1.568 USA (CA and TX) B.1.569 USA (CO) B.1.570 USA lineage, split out from B.1.369 B.1.571 USA, split from B.1.325 B.1.572 Canada (BC) B.1.573 USA lineage, split out from B.1.363 B.1.574 Spanish sub lineage of B.1.575 with spike mutations "S:P681H","S:S494P" and "S:T716I". B.1.575.1 Spain lineage, from pango-designation issue #116 B.1.575.2 USA and Aruba lineage with spike mutations "S:P681H","S:S494P" and "S:T716I". B.1.575 USA lineage, formally part of B.1.363 B.1.576 USA lineage, formally part of B.1.2 B.1.577 USA, formally part of B.1.313 B.1.578 USA (AZ) formally part of B.1.516 B.1.579 USA Southern (some B.1.361) B.1.580 USA (TX) B.1.581 USA (TX some B.1.361) B.1.582 USA lineage B.1.585 USA lineage (previously part of B.1.320 that jumped to a new part of the tree) B.1.586 USA (OR) lineage B.1.587 Romanian lineage B.1.588.1 USA (NY/PR) lineage B.1.588 USA lineage B.1.589 USA lineage B.1.590 USA lineage B.1.591 Canadian lineage B.1.592 USA lineage B.1.593 USA lineage B.1.594 USA (FL into Louisiana) B.1.595.1 USA (AZ) B.1.595.2 USA (up the east coast) B.1.595.3 USA (MN) B.1.595.4 USA (was B.1.2) B.1.595 Kenyan lineage B.1.596.1 USA lineage B.1.596 France, Algeria (previously part of B.1.367 that jumped to a new part of the tree) B.1.597 Canada (from NY) B.1.598 USA, Canada (previously part of B.1.311 that jumped to a new part of the tree) B.1.599 Bolivia/ Spain lineage B.1.600 USA lineage B.1.601 USA lineage B.1.602 USA lineage B.1.603 USA lineage B.1.604 USA lineage B.1.605 USA lineage (previously part of B.1.325 that jumped to a new part of the tree) B.1.606 England (previously part of B.1.369 that jumped to a new part of the tree - could also be withdrawn). B.1.607 USA/ Mexico lineage B.1.609 UK lineage, previously part of B.1.235 B.1.610 Canada lineage B.1.611 USA lineage, split out from B.1.361 B.1.612 Danish lineage (amalgam of Danish sequences from B.1.358, B.1.288, B.1.262), split out from B.1.428 B.1.613 Sweden B.1.614 Canada B.1.615 France lineage, pango-designation issue #31 B.1.616 Predominantly India lineage with 484Q, pango-designation issue #49 B.1.617.1 Predominantly India lineage with several spike mutations, pango-designation issue #49 B.1.617.2 Predominantly India lineage with 484Q, pango-designation issue #49 B.1.617.3 Predominantly India lineage with several spike mutations, pango-designation issue #38 B.1.617 India lineage in West Bengal, pango-designation issue #46 B.1.618 South Korea lineage, from pango-designation issue #160 B.1.619.1 Lineage in multiple countries, potentially originated in Cameroon and introduced into Europe, pango-designation issue #44 B.1.619 Lineage in multiple countries, potentially originated in Cameroon and spread within Europe post-introduction, pango-designation issue #54 B.1.620 Lineage in multiple countries, pango-designation issue #115 B.1.621.1 Lineage in multiple countries, from pango-designation issue #232 B.1.621.2 Lineage predominantly in Colombia with several spike mutations, pango-designation issue #57 B.1.621 Reunion lineage, pango-designation issue #58 B.1.622 Predominantly USA lineage with mutations of interest, from pango-designation issue #25 B.1.623 Predominantly Colombia and USA lineage, from pango-designation issue #93 B.1.625 Europe and USA lineage, from pango-designation issue #118 B.1.626 USA, Mexico and Honduras lineage, from pango-designation issue #130 B.1.627 Lineage circulating in several countries, from pango-designation issue #132 B.1.629 Lineage in several countries, from pango-designation issue #137 B.1.630 USA and Mexico lineage, from pango-designation issue #146 B.1.631 Predominantly Mexico lineage, from pango-designation issue #156 B.1.632 India lineage, from pango-designation issue #155 B.1.633 Mexico and USA lineage, from pango-designation issue #159 B.1.634 Mexico and USA lineage, from pango-designation issue #159 B.1.635 USA, Mexico and Honduras lineage, from pango-designation issue #173 B.1.636 USA lineage, from pango-designation issue #353 B.1.637.1 Added as B.1.526.1 15 Mar 2021, but turned out not to be a descendant of B.1.526; was folded into B.1.526 from 14 Jun - 18 Aug 2021; now a separate lineage to leave B.1.526 more congruent with Iota (Nextstrain 21F / original B.1.526); pango-designation issue #154 B.1.637 South Africa lineage, from pango-designation issue #205 B.1.638 Lineage sequenced in USA, potentially associated with Puerto Rico, from pango-designation issue #161 B.1.639 Lineage in Africa and Europe, from pango-designation issue #362 B.1.640.1 Lineage from pango-designation issue #362 B.1.640.2 Lineage in Africa and Europe, from pango-designation issue #297 B.1.640 Lineage in white-tailed deer, from pango-designation issue #453 B.1.641 Wales lineage B.1.67 Scotland B.1.69 Belgian lineage B.1.6 Scotland B.1.70 English Lineage B.1.76 English lineage B.1.77 Netherlands lineage B.1.78 UK lineage B.1.81 Belgian lineage B.1.83 DRC lineage B.1.84 Netherlands, South Africa, Denmark, USA B.1.8 Scottish Lineage B.1.9.1 USA B.1.9.2 Belgium B.1.9.3 European wide lineage with active cases with activity in Switzerland B.1.9.4 European sublineage highly represented in Turkey B.1.9.5 Portuguese lineage B.1.91 UK lineage B.1.93 Luxembourg B.1.94 Netherlands lineage B.1.96 England B.1.97 European wide lineage with active sublineages B.1.9 Northern Irish lineage B.10 European lineage with sequences from the Netherlands, UK, Austria, Slovakia B.11 Japanese lineage B.12 USA lineage B.13 UK lineage B.15 European lineage (Iceland and England) B.18 USA lineage B.19 A large European lineage the origin of which roughly corresponds to the Northern Italian outbreak early in 2020. B.1 USA lineage B.20 Lineage with representation from mainly UK sequences, but also sequences from Portugal, Iceland and Brazil B.23 Scottish lineage B.26 UK lineage, Curacao, Switzerland B.27 UK lineage B.28 Spanish/UK/ Australian lineage B.29 Welsh lineage B.3.1 Reassigned from B.2.12, USA lineage B.30 Reassigned from B.2.5, UK/ Australia/ New Zealand lineage B.31 Scottish lineage B.32 UK lineage B.33 Scottish lineage B.34 Previously B.2.6, USA lineage B.35 Previously B.2.11, Israel lineage B.36 USA lineage B.37 Belgium lineage B.38 Previously B.2.2, USA/ UK/ Australian lineage B.39 A European lineage - Germany & UK predominantly B.3 Lineage from Kazakhstan within the B.4 diversity B.4.1 Bahrain lineage B.4.2 USA lineage B.4.4 Australian lineage B.4.5 Australian lineage B.4.6 Africa and UAE B.4.7 Cryptic lineage in Iran? Occasional international appearances, most recently Nov 2020 B.4.8 Previously B.2.1. Large lineage majoritively from UK and Australia with representation from Europe, Jordan, USA, India, Ghana, South Korea B.40 Previously B.2.10, South Korean lineage B.41 Hong Kong lineage B.42 Hong Kong lineage B.43 Portugal lineage B.44 Scottish lineage B.45 USA lineage B.46 English lineage B.47 Danish lineage B.49 Iranian lineage and global exports B.4 Indonesian lineage B.50 USA lineage B.51 UK lineage B.52 Lithuanian lineage B.53 Redesignated from B.11 (split), UK/Danish B.55 Singapore/Malaysia/Indonesia B.56 Largely Scottish B.57 Largely English, UK/Canada/Australia B.58 Japanese lineage B.5 Malaysian lineage B.6.1 Malaysian lineage B.6.2 Singapore lineage B.6.3 Singapore lineage B.6.4 Australian lineage B.6.5 Singapore lineage B.6.6 Papua New Guinea B.6.8 England B.60 Redesignated from B.40 (split), UK B.61 Indian lineage B.6 B.1.1.529.1.1.10 Alias of B.1.1.529.1.1.10, Canada lineage BA.1.1.10 B.1.1.529.1.1.11 Alias of B.1.1.529.1.1.11, European lineage BA.1.1.11 B.1.1.529.1.1.12 Alias of B.1.1.529.1.1.12, UK lineage BA.1.1.12 B.1.1.529.1.1.13 Alias of B.1.1.529.1.1.13, UK lineage BA.1.1.13 B.1.1.529.1.1.14 Alias of B.1.1.529.1.1.14, European lineage BA.1.1.14 B.1.1.529.1.1.15 Alias of B.1.1.529.1.1.15, Europe and Australia lineage BA.1.1.15 B.1.1.529.1.1.16 Alias of B.1.1.529.1.1.16, Canada and USA lineage BA.1.1.16 B.1.1.529.1.1.17 Alias of B.1.1.529.1.1.17, USA lineage, from pango-designation issue #452 BA.1.1.17 B.1.1.529.1.1.18 Alias of B.1.1.529.1.1.18, USA lineage BA.1.1.18 B.1.1.529.1.1.1 Alias of B.1.1.529.1.1.1, European lineage BA.1.1.1 B.1.1.529.1.1.2 Alias of B.1.1.529.1.1.2, Japan lineage BA.1.1.2 B.1.1.529.1.1.3 Alias of B.1.1.529.1.1.3, Switzerland lineage BA.1.1.3 B.1.1.529.1.1.4 Alias of B.1.1.529.1.1.4, UK lineage BA.1.1.4 B.1.1.529.1.1.5 Alias of B.1.1.529.1.1.5, South Korea lineage BA.1.1.5 B.1.1.529.1.1.6 Alias of B.1.1.529.1.1.6, Canada lineage BA.1.1.6 B.1.1.529.1.1.7 Alias of B.1.1.529.1.1.7, lineage in India and other countries BA.1.1.7 B.1.1.529.1.1.8 Alias of B.1.1.529.1.1.8, USA lineage BA.1.1.8 B.1.1.529.1.1.9 Alias of B.1.1.529.1.1.9, New Zealand lineage BA.1.1.9 B.1.1.529.1.10 Alias of B.1.1.529.1.10, UK lineage BA.1.10 B.1.1.529.1.12 Alias of B.1.1.529.1.12, UK lineage BA.1.12 B.1.1.529.1.13.1 Alias of B.1.1.529.1.13.1, Indonesia lineage BA.1.13.1 B.1.1.529.1.13 Alias of B.1.1.529.1.13, European lineage BA.1.13 B.1.1.529.1.14.1 Alias of B.1.1.529.1.14.1, Brazil lineage, from pango-designation issue #506 BA.1.14.1 B.1.1.529.1.14.2 Alias of B.1.1.529.1.14.2, Brazil lineage BA.1.14.2 B.1.1.529.1.14 Alias of B.1.1.529.1.14, lineage in Brazil and other countries BA.1.14 B.1.1.529.1.15.1 Alias of B.1.1.529.1.15.1, UK lineage BA.1.15.1 B.1.1.529.1.15.2 Alias of B.1.1.529.1.15.2, USA lineage, from pango-designation issue #508 BA.1.15.2 B.1.1.529.1.15.3 Alias of B.1.1.529.1.15.3, Peru lineage, from pango-designation issue #573 BA.1.15.3 B.1.1.529.1.15 Alias of B.1.1.529.1.15, lineage in USA and other countries BA.1.15 B.1.1.529.1.16.1 Alias of B.1.1.529.1.16.1, Thailand, Cambodia and Indonesia lineage BA.1.16.1 B.1.1.529.1.16.2 Alias of B.1.1.529.1.16.2, Greece lineage BA.1.16.2 B.1.1.529.1.16 Alias of B.1.1.529.1.16, UK lineage BA.1.16 B.1.1.529.1.17.1 Alias of B.1.1.529.1.17.1, Australia lineage BA.1.17.1 B.1.1.529.1.17.2 Alias of B.1.1.529.1.17.2, lineage from pango-designation issue #462 BA.1.17.2 B.1.1.529.1.17 Alias of B.1.1.529.1.17, European lineage BA.1.17 B.1.1.529.1.18 Alias of B.1.1.529.1.18, Europe and North America lineage, from pango-designation issue #474 BA.1.18 B.1.1.529.1.19 Alias of B.1.1.529.1.19, Europe lineage BA.1.19 B.1.1.529.1.1 Alias of B.1.1.529.1.1, from pango-designation issue #360 BA.1.1 B.1.1.529.1.20 Alias of B.1.1.529.1.20, USA lineage, from pango-designation issue #375 BA.1.20 B.1.1.529.1.21.1 Alias of B.1.1.529.1.21.1, Italy lineage, from pango-designation issue #409 BA.1.21.1 B.1.1.529.1.21 Alias of B.1.1.529.1.21, lineage from pango-designation issue #505 BA.1.21 B.1.1.529.1.22 Alias of B.1.1.529.1.22, Peru lineage from pango-designation issue #529 BA.1.22 B.1.1.529.1.23 Alias of B.1.1.529.1.23, mainly found in USA, from pango-designation issue #663 BA.1.23 B.1.1.529.1.24 Alias of B.1.1.529.1.24, found in Spain, from pango-designation issue #666 BA.1.24 B.1.1.529.1.2 Alias of B.1.1.529.1.2, Mayotte and Reunion lineage BA.1.2 B.1.1.529.1.3 Alias of B.1.1.529.1.3, Canada lineage BA.1.3 B.1.1.529.1.4 Alias of B.1.1.529.1.4, France lineage BA.1.4 B.1.1.529.1.5 Alias of B.1.1.529.1.5, UK lineage BA.1.5 B.1.1.529.1.6 Alias of B.1.1.529.1.6, Canada and Sint Maarten lineage BA.1.6 B.1.1.529.1.7 Alias of B.1.1.529.1.7, UK lineage BA.1.7 B.1.1.529.1.8 Alias of B.1.1.529.1.8, European lineage BA.1.8 B.1.1.529.1.9 Alias of B.1.1.529.1.9, Brazil lineage BA.1.9 B.1.1.529.1 Alias of B.1.1.529.1, from pango-designation issue #361 BA.1 B.1.1.529.2.10.1 Alias of B.1.1.529.2.10.1, lineage in Singapore and other countries BA.2.10.1 B.1.1.529.2.10.2 Alias of B.1.1.529.2.10.2, mainly found in Japan, from pango-designation issue #569 BA.2.10.2 B.1.1.529.2.10.3 Alias of B.1.1.529.2.10.3, mainly found in England, India and Bangladesh, from pango-designation issue #609 BA.2.10.3 B.1.1.529.2.10.4 Alias of B.1.1.529.2.10.4, mainly found in India, from pango-designation issue #898 BA.2.10.4 B.1.1.529.2.10 Alias of B.1.1.529.2.10, lineage from pango-designation issue #496 BA.2.10 B.1.1.529.2.11 Alias of B.1.1.529.2.11, France lineage, from pango-designation issue #491 BA.2.11 B.1.1.529.2.12.1 Alias of B.1.1.529.2.12.1, USA and Canada lineage, from pango-designation issue #499 BA.2.12.1 B.1.1.529.2.12.2 Alias of B.1.1.529.2.12.2, mainly found in Australia, from pango-designation issue #686 BA.2.12.2 B.1.1.529.2.12 Alias of B.1.1.529.2.12, North America and Europe lineage, from pango-designation issue #499 BA.2.12 B.1.1.529.2.13.1 Alias of B.1.1.529.2.13.1, mainly found in USA, Canada and Colombia, from pango-designation issue #785 BA.2.13.1 B.1.1.529.2.13 Alias of B.1.1.529.2.13, Europe lineage, from pango-designation issue #531 BA.2.13 B.1.1.529.2.14 Alias of B.1.1.529.2.14, Denmark lineage, from pango-designation issue #512 BA.2.14 B.1.1.529.2.15 Alias of B.1.1.529.2.15, South Africa lineage, from pango-designation issue #533 BA.2.15 B.1.1.529.2.16 Alias of B.1.1.529.2.16, UK lineage, from pango-designation issue #534 BA.2.16 B.1.1.529.2.17 Alias of B.1.1.529.2.17, Vietnam and Japan lineage, from pango-designation issue #520 BA.2.17 B.1.1.529.2.18 Alias of B.1.1.529.2.18, UK lineage, from pango-designation issue #528 BA.2.18 B.1.1.529.2.19 Alias of B.1.1.529.2.19, Germany lineage, from pango-designation issue #535 BA.2.19 B.1.1.529.2.1 Alias of B.1.1.529.2.1, UK lineage BA.2.1 B.1.1.529.2.2.1 Alias of B.1.1.529.2.2.1, China lineage, from pango-designation issue #675 BA.2.2.1 B.1.1.529.2.20 Alias of B.1.1.529.2.20, Canada lineage, from pango-designation issue #544 BA.2.20 B.1.1.529.2.21 Alias of B.1.1.529.2.21, Canada and USA lineage, from pango-designation issue #547 BA.2.21 B.1.1.529.2.22 Alias of B.1.1.529.2.22, UK lineage, from pango-designation issue #562 BA.2.22 B.1.1.529.2.23.1 Alias of B.1.1.529.2.23.1, mainly found in England, USA and Denmark, from pango-designation issue #532 BA.2.23.1 B.1.1.529.2.23 Alias of B.1.1.529.2.23, UK lineage, from pango-designation issue #546 BA.2.23 B.1.1.529.2.24 Alias of B.1.1.529.2.24, Japan lineage BA.2.24 B.1.1.529.2.25.1 Alias of B.1.1.529.2.25.1, Slovakia lineage BA.2.25.1 B.1.1.529.2.25 Alias of B.1.1.529.2.25, Sweden lineage BA.2.25 B.1.1.529.2.26 Alias of B.1.1.529.2.26, USA lineage BA.2.26 B.1.1.529.2.27 Alias of B.1.1.529.2.27, Thailand lineage BA.2.27 B.1.1.529.2.28 Alias of B.1.1.529.2.28, Singapore lineage BA.2.28 B.1.1.529.2.29 Alias of B.1.1.529.2.29, Japan lineage BA.2.29 B.1.1.529.2.2 Alias of B.1.1.529.2.2, Hong Kong lineage BA.2.2 B.1.1.529.2.3.10 Alias of B.1.1.529.2.3.10, Canada and USA lineage BA.2.3.10 B.1.1.529.2.3.11 Alias of B.1.1.529.2.3.11, Japan lineage BA.2.3.11 B.1.1.529.2.3.12 Alias of B.1.1.529.2.3.12, South Korea lineage BA.2.3.12 B.1.1.529.2.3.13 Alias of B.1.1.529.2.3.13, Japan lineage BA.2.3.13 B.1.1.529.2.3.14 Alias of B.1.1.529.2.3.14, South Korea lineage BA.2.3.14 B.1.1.529.2.3.15 Alias of B.1.1.529.2.3.15, Italy and Spain lineage BA.2.3.15 B.1.1.529.2.3.16 Alias of B.1.1.529.2.3.16, Papua New Guinea lineage, from pango-designation issue #524 BA.2.3.16 B.1.1.529.2.3.17 Alias of B.1.1.529.2.3.17, Northern Mariana Islands and USA lineage, from pango-designation issue #677 BA.2.3.17 B.1.1.529.2.3.18 Alias of B.1.1.529.2.3.18, Japan lineage, from pango-designation issue #687 BA.2.3.18 B.1.1.529.2.3.19 Alias of B.1.1.529.2.3.19, found Brunei, from pango-designation issue #824 BA.2.3.19 B.1.1.529.2.3.1 Alias of B.1.1.529.2.3.1, Japan lineage, from pango-designation issue #495 BA.2.3.1 B.1.1.529.2.3.20 Alias of B.1.1.529.2.3.20, found globally, unclear origin, from pango-designation issue #1013 BA.2.3.20 B.1.1.529.2.3.21 Alias of B.1.1.529.2.3.21, Philippines, S:P9L and 493 reversion BA.2.3.21 B.1.1.529.2.3.22 Alias of B.1.1.529.2.3.22, Philippines/Qatar/Germany, Δ69-70, W152L, N211-, L212I, S255F, R346T, K417T, F490A, A942S from #1462 BA.2.3.22 B.1.1.529.2.3.2 Alias of B.1.1.529.2.3.2, Vietnam and Japan lineage BA.2.3.2 B.1.1.529.2.3.4 Alias of B.1.1.529.2.3.4, Canada lineage BA.2.3.4 B.1.1.529.2.3.5 Alias of B.1.1.529.2.3.5, mainly found in USA, England and Spain, from pango-designation issue #627 BA.2.3.5 B.1.1.529.2.3.6 Alias of B.1.1.529.2.3.6, mainly found in Canada and USA, from pango-designation issue #633 BA.2.3.6 B.1.1.529.2.3.7 Alias of B.1.1.529.2.3.7, mainly found in Japan, Hong Kong and Taiwan, from pango-designation issue #643 BA.2.3.7 B.1.1.529.2.3.8 Alias of B.1.1.529.2.3.8, South Korea lineage BA.2.3.8 B.1.1.529.2.3.9 Alias of B.1.1.529.2.3.9, lineage in Netherlands and other countries BA.2.3.9 B.1.1.529.2.30 Alias of B.1.1.529.2.30, Curacao lineage BA.2.30 B.1.1.529.2.31.1 Alias of B.1.1.529.2.31.1, mainly found in Uganda, defined by S:68T, from pango-designation issue #819 BA.2.31.1 B.1.1.529.2.31 Alias of B.1.1.529.2.31, Israel lineage BA.2.31 B.1.1.529.2.32 Alias of B.1.1.529.2.32, Indonesia lineage BA.2.32 B.1.1.529.2.33 Alias of B.1.1.529.2.33, Australia lineage BA.2.33 B.1.1.529.2.34 Alias of B.1.1.529.2.34, Norway lineage BA.2.34 B.1.1.529.2.35 Alias of B.1.1.529.2.35, Predominantly Portugal lineage, from pango-designation issue #554 BA.2.35 B.1.1.529.2.36 Alias of B.1.1.529.2.36, mainly found in Germany, Belgium, England and Denmark, from pango-designation issue #565 BA.2.36 B.1.1.529.2.37 Alias of B.1.1.529.2.37, mainly found in England, Scotland, Wales, from pango-designation issue #572 BA.2.37 B.1.1.529.2.38.1 Alias of B.1.1.529.2.38.1, India lineage, from pango-designation issue #809 BA.2.38.1 B.1.1.529.2.38.2 Alias of B.1.1.529.2.38.2, mainly found in India, from pango-designation issue #828 BA.2.38.2 B.1.1.529.2.38.3 Alias of B.1.1.529.2.38.3, mainly found in India, from pango-designation issue #840 BA.2.38.3 B.1.1.529.2.38.4 Alias of B.1.1.529.2.38.4, mainly found in India, from pango-designation issue #746 BA.2.38.4 B.1.1.529.2.38 Alias of B.1.1.529.2.38, lineage in India and other countries, from pango-designation issue #541 BA.2.38 B.1.1.529.2.39 Alias of B.1.1.529.2.39, mainly found in England, from pango-designation issue #575 BA.2.39 B.1.1.529.2.3 Alias of B.1.1.529.2.3, lineage in Philippines and other countries BA.2.3 B.1.1.529.2.40.1 Alias of B.1.1.529.2.40.1, mainly found in Malaysia, England, Germany and Denmark, from pango-designation issue #542 BA.2.40.1 B.1.1.529.2.40 Alias of B.1.1.529.2.40, mainly found in Malaysia, England, Denmark and Germany, from pango-designation issue #542 BA.2.40 B.1.1.529.2.41 Alias of B.1.1.529.2.41, mainly found in England and Scotland, from pango-designation issue #586 BA.2.41 B.1.1.529.2.42 Alias of B.1.1.529.2.42, mainly found in Australia, from pango-designation issue #610 BA.2.42 B.1.1.529.2.43 Alias of B.1.1.529.2.43, mainly found in India, from pango-designation issue #612 BA.2.43 B.1.1.529.2.44 Alias of B.1.1.529.2.44, mainly found in Belgium and Luxembourg, from pango-designation issue #613 BA.2.44 B.1.1.529.2.45 Alias of B.1.1.529.2.45, mainly found in Sweden and Denmark, from pango-designation issue #616 BA.2.45 B.1.1.529.2.46 Alias of B.1.1.529.2.46, mainly found in Scotland, from pango-designation issue #626 BA.2.46 B.1.1.529.2.47 Alias of B.1.1.529.2.47, mainly found in Denmark, England, and USA, from pango-designation issue #631 BA.2.47 B.1.1.529.2.48 Alias of B.1.1.529.2.48, mainly found in USA, Scotland and England, from pango-designation issue #634 BA.2.48 B.1.1.529.2.49 Alias of B.1.1.529.2.49, mainly found in France, England and USA, from pango-designation issue #640 BA.2.49 B.1.1.529.2.4 Alias of B.1.1.529.2.4, Singapore lineage BA.2.4 B.1.1.529.2.50 Alias of B.1.1.529.2.50, mainly found in Scotland and England, from pango-designation issue #641 BA.2.50 B.1.1.529.2.51 Alias of B.1.1.529.2.51, mainly found in Denmark, from pango-designation issue #644 BA.2.51 B.1.1.529.2.52 Alias of B.1.1.529.2.52, mainly found in Italy, Germany, Denmark and USA, from pango-designation issue #648 BA.2.52 B.1.1.529.2.53 Alias of B.1.1.529.2.53, mainly found in Denmark, from pango-designation issue #651 BA.2.53 B.1.1.529.2.54 Alias of B.1.1.529.2.54, mainly found in Germany, Spain and Denmark, from pango-designation issue #658 BA.2.54 B.1.1.529.2.55 Alias of B.1.1.529.2.55, mainly found in England, USA and Scotland, from pango-designation issue #660 BA.2.55 B.1.1.529.2.56.1 Alias of B.1.1.529.2.56.1, mainly found in Japan, from pango-designation issue #745 BA.2.56.1 B.1.1.529.2.56 Alias of B.1.1.529.2.56, mainly found in Europe, from pango-designation issue #668 BA.2.56 B.1.1.529.2.57 Alias of B.1.1.529.2.57, Malaysia, Singapore and Australia lineage BA.2.57 B.1.1.529.2.58 Alias of B.1.1.529.2.58, Reunion lineage BA.2.58 B.1.1.529.2.59 Alias of B.1.1.529.2.59, mainly found in USA, from pango-designation issue #672 BA.2.59 B.1.1.529.2.5 Alias of B.1.1.529.2.5, lineage in Portugal and other countries BA.2.5 B.1.1.529.2.60 Alias of B.1.1.529.2.60, Peru and Chile lineage BA.2.60 B.1.1.529.2.61 Alias of B.1.1.529.2.61, Singapore lineage BA.2.61 B.1.1.529.2.62 Alias of B.1.1.529.2.62, Australia lineage BA.2.62 B.1.1.529.2.63 Alias of B.1.1.529.2.63, Greece lineage BA.2.63 B.1.1.529.2.64 Alias of B.1.1.529.2.64, Indonesia lineage BA.2.64 B.1.1.529.2.65 Alias of B.1.1.529.2.65, Canada and USA lineage BA.2.65 B.1.1.529.2.66 Alias of B.1.1.529.2.66, Canada lineage BA.2.66 B.1.1.529.2.67 Alias of B.1.1.529.2.67, Slovakia lineage BA.2.67 B.1.1.529.2.68 Alias of B.1.1.529.2.68, South Korea lineage BA.2.68 B.1.1.529.2.69 Alias of B.1.1.529.2.69, Martinique lineage BA.2.69 B.1.1.529.2.6 Alias of B.1.1.529.2.6, lineage in France and other countries BA.2.6 B.1.1.529.2.70 Alias of B.1.1.529.2.70, Croatia lineage BA.2.70 B.1.1.529.2.71 Alias of B.1.1.529.2.71, mainly found in Norway, Sweden and Denmark, from pango-designation issue #695 BA.2.71 B.1.1.529.2.72 Alias of B.1.1.529.2.72, mainly found in USA, Germany and Switzerland, from pango-designation issue #698 BA.2.72 B.1.1.529.2.73 Alias of B.1.1.529.2.73, Puerto Rico and USA lineage, from pango-designation issue #632 BA.2.73 B.1.1.529.2.74 Alias of B.1.1.529.2.74, mainly found in India, from pango-designation issue #775 BA.2.74 B.1.1.529.2.75.10 Alias of B.1.1.529.2.75.10, India, ORF1a:T3959A BA.2.75.10 B.1.1.529.2.75.1 Alias of B.1.1.529.2.75.1, mainly found in India from pango-designation issue #856 BA.2.75.1 B.1.1.529.2.75.2 Alias of B.1.1.529.2.75.2, mainly found in Asia and Australia, pango-designation issue #963 BA.2.75.2 B.1.1.529.2.75.3 Alias of B.1.1.529.2.75.3, mainly found in India, pango-designation issue #965 BA.2.75.3 B.1.1.529.2.75.4 Alias of B.1.1.529.2.75.4, mainly found in India, pango-designation issue #935 BA.2.75.4 B.1.1.529.2.75.5 Alias of B.1.1.529.2.75.5, mainly found in India, pango-designation issue #947 BA.2.75.5 B.1.1.529.2.75.6 Alias of B.1.1.529.2.75.6, mainly found in India, defined by S:R346T on the BA.2.75 polytomy BA.2.75.6 B.1.1.529.2.75.7 Alias of B.1.1.529.2.75.7, mainly found in India, defined by S:F486S on the BA.2.75 polytomy BA.2.75.7 B.1.1.529.2.75.8 Alias of B.1.1.529.2.75.8, Singapore/Australia, defined by S:L452Q, issue #1085 BA.2.75.8 B.1.1.529.2.75.9 Alias of B.1.1.529.2.75.9, India, defined by S:R346T after 17679T BA.2.75.9 B.1.1.529.2.75 Alias of B.1.1.529.2.75, mainly found in India, from pango-designation issue #773 BA.2.75 B.1.1.529.2.76.1 Alias of B.1.1.529.2.76.1, mainly found in India, from pango-designation issue #899 BA.2.76.1 B.1.1.529.2.76.2 Alias of B.1.1.529.2.76.2, found in Japan, from pango-designation issue #939 BA.2.76.2 B.1.1.529.2.76 Alias of B.1.1.529.2.76, mainly found in India and USA, from pango-designation issue #787 BA.2.76 B.1.1.529.2.77 Alias of B.1.1.529.2.77, mainly found in Ireland, England and USA, from pango-designation issue #732 BA.2.77 B.1.1.529.2.78 Alias of B.1.1.529.2.78, mainly found in India, from pango-designation issue #814 BA.2.78 B.1.1.529.2.79.1 Alias of B.1.1.529.2.79.1, India lineage, from pango-designation issue #814 BA.2.79.1 B.1.1.529.2.79 Alias of B.1.1.529.2.79, Kuwait and Israel lineage, from pango-designation issue #812 BA.2.79 B.1.1.529.2.7 Alias of B.1.1.529.2.7, USA lineage BA.2.7 B.1.1.529.2.80 Alias of B.1.1.529.2.80, found in Denmark, from pango-designation issue #733 BA.2.80 B.1.1.529.2.81 Alias of B.1.1.529.2.81, Brazil lineage BA.2.81 B.1.1.529.2.82 Alias of B.1.1.529.2.82, mainly found in Australia, Israel and Japan, from pango-designation issue #874 BA.2.82 B.1.1.529.2.83 Alias of B.1.1.529.2.83, mainly found in India, from pango-designation issue #1053 BA.2.83 B.1.1.529.2.85 Alias of B.1.1.529.2.85, mainly found in Japan, from pango-designation issue #983 BA.2.85 B.1.1.529.2.8 Alias of B.1.1.529.2.8, UK lineage, from pango-designation issue #486 BA.2.8 B.1.1.529.2.9.1 Alias of B.1.1.529.2.9.1, UK lineage, from pango-designation issue #530 BA.2.9.1 B.1.1.529.2.9.2 Alias of B.1.1.529.2.9.2, USA lineage BA.2.9.2 B.1.1.529.2.9.3 Alias of B.1.1.529.2.9.3, mainly found in France, England, and Germany, from pango-designation issue #630 BA.2.9.3 B.1.1.529.2.9.4 Alias of B.1.1.529.2.9.4, mainly found in France, from pango-designation issue #635 BA.2.9.4 B.1.1.529.2.9.5 Alias of B.1.1.529.2.9.5, Thailand lineage BA.2.9.5 B.1.1.529.2.9.6 Alias of B.1.1.529.2.9.6, mainly found in Spain, Denmark and Germany, from pango-designation issue #671 BA.2.9.6 B.1.1.529.2.9.7 Alias of B.1.1.529.2.9.7, found mainly in USA, from pango-designation issue #864 BA.2.9.7 B.1.1.529.2.9 Alias of B.1.1.529.2.9, European lineage, from pango-designation issue #432 BA.2.9 B.1.1.529.2 Alias of B.1.1.529.2, from pango-designation issue #361 BA.2 B.1.1.529.3.1 Alias of B.1.1.529.3.1, mainly found in Poland, from pango-designation issue #540 BA.3.1 B.1.1.529.3 Alias of B.1.1.529.3, from pango-designation issue #367 BA.3 B.1.1.529.4.1.10 Alias of B.1.1.529.4.1.10, mainly found in France, from issue #1073, defined by S:N354D, S:R346T BA.4.1.10 B.1.1.529.4.1.1 Alias of B.1.1.529.4.1.1, mainly found in South Africa and Germany, from pango-designation issue #667 BA.4.1.1 B.1.1.529.4.1.2 Alias of B.1.1.529.4.1.2, Austria lineage BA.4.1.2 B.1.1.529.4.1.3 Alias of B.1.1.529.4.1.3, Israel lineage BA.4.1.3 B.1.1.529.4.1.4 Alias of B.1.1.529.4.1.4, Israel lineage BA.4.1.4 B.1.1.529.4.1.5 Alias of B.1.1.529.4.1.5, Israel lineage BA.4.1.5 B.1.1.529.4.1.6 Alias of B.1.1.529.4.1.6, USA lineage BA.4.1.6 B.1.1.529.4.1.7 Alias of B.1.1.529.4.1.7, Australia lineage BA.4.1.7 B.1.1.529.4.1.8 Alias of B.1.1.529.4.1.8, mainly found in England, USA, South Africa and Mexico, from pango-designation issue #800 BA.4.1.8 B.1.1.529.4.1.9 Alias of B.1.1.529.4.1.9, mainly found in Zambia, USA, England and Mexico, from pango-designation issue #926 BA.4.1.9 B.1.1.529.4.1 Alias of B.1.1.529.4.1, mainly found in South Africa, from pango-designation issue #548 BA.4.1 B.1.1.529.4.2 Alias of B.1.1.529.4.2, USA lineage BA.4.2 B.1.1.529.4.3 Alias of B.1.1.529.4.3, Israel lineage BA.4.3 B.1.1.529.4.4 Alias of B.1.1.529.4.4, USA lineage BA.4.4 B.1.1.529.4.5 Alias of B.1.1.529.4.5, Australia lineage BA.4.5 B.1.1.529.4.6.1 Alias of B.1.1.529.4.6.1, mainly found in UK, USA and Germany, from pango-designation issue #900 BA.4.6.1 B.1.1.529.4.6.2 Alias of B.1.1.529.4.6.2, Dominican Republic, USA, defined by S:V445A, from pango-designation issue #1198 BA.4.6.2 B.1.1.529.4.6.3 Alias of B.1.1.529.4.6.3, defined by S:444N, S:460K, S:144-, from pango-designation issue #1195 BA.4.6.3 B.1.1.529.4.6.4 Alias of B.1.1.529.4.6.4, Oceania, defined by ORF7a:Q62H BA.4.6.4 B.1.1.529.4.6.5 Alias of B.1.1.529.4.6.5, global, defined by ORF9b:N36S BA.4.6.5 B.1.1.529.4.6 Alias of B.1.1.529.4.6, mainly found in USA, England and Denmark, from pango-designation issue #741 BA.4.6 B.1.1.529.4.7 Alias of B.1.1.529.4.7, mainly found in England, South Africa and Scotland, from pango-designation issue #777 BA.4.7 B.1.1.529.4.8 Alias of B.1.1.529.4.8, mainly South Africa and Eswatini, from pango-designation issue #670 BA.4.8 B.1.1.529.4 Alias of B.1.1.529.4, from pango-designation issue #517 BA.4 B.1.1.529.5.1.10 Alias of B.1.1.529.5.1.10, mainly found in USA, Italy and England, from pango-designation issue #901 BA.5.1.10 B.1.1.529.5.1.11 Alias of B.1.1.529.5.1.11, mainly found in Denmark, from pango-designation issue #908 BA.5.1.11 B.1.1.529.5.1.12 Alias of B.1.1.529.5.1.12, mainly found in Spain, from pango-designation issue #902 BA.5.1.12 B.1.1.529.5.1.14 Alias of B.1.1.529.5.1.14, mainly found in Brazil BA.5.1.14 B.1.1.529.5.1.15 Alias of B.1.1.529.5.1.15, Peru and Brazil lineage BA.5.1.15 B.1.1.529.5.1.16 Alias of B.1.1.529.5.1.16, Japan lineage BA.5.1.16 B.1.1.529.5.1.17 Alias of B.1.1.529.5.1.17, France lineage BA.5.1.17 B.1.1.529.5.1.18 Alias of B.1.1.529.5.1.18, mainly found in USA, from pango-designation issue #930 BA.5.1.18 B.1.1.529.5.1.19 Alias of B.1.1.529.5.1.19, mainly found in Netherlands, Germany, USA, and England, from pango-designation issue #999 BA.5.1.19 B.1.1.529.5.1.1 Alias of B.1.1.529.5.1.1, USA lineage BA.5.1.1 B.1.1.529.5.1.20 Alias of B.1.1.529.5.1.20, mainly found in USA and Belgium, from pango-designation issue #1000 BA.5.1.20 B.1.1.529.5.1.21 Alias of B.1.1.529.5.1.21, mainly found in Gambia and Japan, from pango-designation issue #958 BA.5.1.21 B.1.1.529.5.1.22 Alias of B.1.1.529.5.1.22, mainly found in Europe, defined by ORF1b:S1273L, from pango-designation issue #1135 BA.5.1.22 B.1.1.529.5.1.23 Alias of B.1.1.529.5.1.23, mainly found in Spain, defined by ORF1a:S302F, from pango-designation issue #1135 BA.5.1.23 B.1.1.529.5.1.24 Alias of B.1.1.529.5.1.24, mainly found in Finland, defined by ORF1b:V1271L, from pango-designation issue #1135 BA.5.1.24 B.1.1.529.5.1.25 Alias of B.1.1.529.5.1.25, mainly found in Mexico and Peru, defined by ORF7b:H42Y, from pango-designation issue #1135 BA.5.1.25 B.1.1.529.5.1.26 Alias of B.1.1.529.5.1.26, mainly found in Czechia, defined by S:R346T BA.5.1.26 B.1.1.529.5.1.27 Alias of B.1.1.529.5.1.27, mainly found in North America, defined by S:R346T BA.5.1.27 B.1.1.529.5.1.28 Alias of B.1.1.529.5.1.28, mainly found in North America, defined by S:R346T (and A18480G) BA.5.1.28 B.1.1.529.5.1.29 Alias of B.1.1.529.5.1.29, mainly found in Russia, Germany and Estonia, from pango-designation issue #1060 BA.5.1.29 B.1.1.529.5.1.2 Alias of B.1.1.529.5.1.2, mainly found in Denmark, Portugal and Luxembourg, from pango-designation issue #790 BA.5.1.2 B.1.1.529.5.1.30 Alias of B.1.1.529.5.1.30, ORF6:D6G BA.5.1.30 B.1.1.529.5.1.31 Alias of B.1.1.529.5.1.31, found mainly in France and Denmark, from pango-designation issue #991 BA.5.1.31 B.1.1.529.5.1.3 Alias of B.1.1.529.5.1.3, mainly found in Germany Portugal and Spain, from pango-designation issue #765 BA.5.1.3 B.1.1.529.5.1.4 Alias of B.1.1.529.5.1.4, mainly found in Denmark and England, from pango-designation issue #801 BA.5.1.4 B.1.1.529.5.1.5 Alias of B.1.1.529.5.1.5, mainly found in UK, Denmark, and Belgium, from pango-designation issue #835 BA.5.1.5 B.1.1.529.5.1.6 Alias of B.1.1.529.5.1.6, Mexico lineage BA.5.1.6 B.1.1.529.5.1.7 Alias of B.1.1.529.5.1.7, Canada lineage BA.5.1.7 B.1.1.529.5.1.8 Alias of B.1.1.529.5.1.8, Peru lineage BA.5.1.8 B.1.1.529.5.1.9 Alias of B.1.1.529.5.1.9, mainly found in England, Luxembourg, Scotland and Ireland from pango-designation issue #786 BA.5.1.9 B.1.1.529.5.10.1 Alias of B.1.1.529.5.10.1, mainly from Philippines, defined by S:346T, from pango-designation issue #1031 BA.5.10.1 B.1.1.529.5.10 Alias of B.1.1.529.5.10, mainly found in Philippines, Canada, and USA, from pango-designation issue #936 BA.5.10 B.1.1.529.5.11 Alias of B.1.1.529.5.11, South Africa, C1627T, S:R346T, #1277 BA.5.11 B.1.1.529.5.1 Alias of B.1.1.529.5.1, Portugal lineage BA.5.1 B.1.1.529.5.2.10 Alias of B.1.1.529.5.2.10, Brazil lineage BA.5.2.10 B.1.1.529.5.2.11 Alias of B.1.1.529.5.2.11, Philippines lineage BA.5.2.11 B.1.1.529.5.2.12 Alias of B.1.1.529.5.2.12, Japan lineage BA.5.2.12 B.1.1.529.5.2.13 Alias of B.1.1.529.5.2.13, mainly found in England, from pango-designation issue #959 BA.5.2.13 B.1.1.529.5.2.14 Alias of B.1.1.529.5.2.14, mainly found in Denmark, Canada and Pakistan, from pango-designation issue #1002 BA.5.2.14 B.1.1.529.5.2.16 Alias of B.1.1.529.5.2.16, Indonesia lineage, defined by ORF1a:A3697V, indirectly from pango-designation issue #1065 BA.5.2.16 B.1.1.529.5.2.18 Alias of B.1.1.529.5.2.18, mainly Scandinavia, defined by S:K444R on ORF1b:1050N branch, from pango-designation issue #1025 BA.5.2.18 B.1.1.529.5.2.19 Alias of B.1.1.529.5.2.19, mainly Scandinavia, defined by ORF3a:T14I on ORF1b:1050N branch, from issue #916 BA.5.2.19 B.1.1.529.5.2.1 Alias of B.1.1.529.5.2.1, mainly found in South Africa, England and USA, from pango-designation issue #657 BA.5.2.1 B.1.1.529.5.2.20 Alias of B.1.1.529.5.2.20, mainly Indonesia, defined by C23707T on ORF1b:1050N branch to reduce unspecified BA.5.2 BA.5.2.20 B.1.1.529.5.2.21 Alias of B.1.1.529.5.2.21, mainly Indonesia, defined by C5284T on ORF1b:1050N branch to reduce unspecified BA.5.2 BA.5.2.21 B.1.1.529.5.2.22 Alias of B.1.1.529.5.2.22, mainly found in USA, Canada and Germany, from pango-designation issue #945 BA.5.2.22 B.1.1.529.5.2.23 Alias of B.1.1.529.5.2.23, mainly found in USA, from pango-designation issue #1090 BA.5.2.23 B.1.1.529.5.2.24 Alias of B.1.1.529.5.2.24, defined by S:K444N on ORF1b:1050N branch BA.5.2.24 B.1.1.529.5.2.25 Alias of B.1.1.529.5.2.25, mainly found in France, USA and Canada, from pango-designation issue #1111 BA.5.2.25 B.1.1.529.5.2.26 Alias of B.1.1.529.5.2.26, most common in Thailand, defined by ORF3a:L108V, from pango-designation issue #1133 BA.5.2.26 B.1.1.529.5.2.27 Alias of B.1.1.529.5.2.27, most common in Vietnam, defined by ORF1a:I2332V, from pango-designation issue #1133 BA.5.2.27 B.1.1.529.5.2.28 Alias of B.1.1.529.5.2.28, most common in Malaysia, defined by ORF1a:T1437I, from pango-designation issue #1133 BA.5.2.28 B.1.1.529.5.2.29 Alias of B.1.1.529.5.2.29, mainly found in Denmark, from pango-designation issue #1050 BA.5.2.29 B.1.1.529.5.2.2 Alias of B.1.1.529.5.2.2, France and Martinique lineage BA.5.2.2 B.1.1.529.5.2.30 Alias of B.1.1.529.5.2.30, Europe lineage, defined by S:G446D BA.5.2.30 B.1.1.529.5.2.31 Alias of B.1.1.529.5.2.31, US lineage, defined by S:L84I BA.5.2.31 B.1.1.529.5.2.32 Alias of B.1.1.529.5.2.32, Russia lineage, defined by S:N450D BA.5.2.32 B.1.1.529.5.2.33 Alias of B.1.1.529.5.2.33, UK lineage, defined by ORF8:P93S BA.5.2.33 B.1.1.529.5.2.34 Alias of B.1.1.529.5.2.34, mainly found in Israel and USA, from pango-designation issue #992 BA.5.2.34 B.1.1.529.5.2.35 Alias of B.1.1.529.5.2.35, Pakistan lineage, defined by S:R346T after G28423C and C7006T BA.5.2.35 B.1.1.529.5.2.36 Alias of B.1.1.529.5.2.36, India/Pakistan lineage, defined by S:K444T BA.5.2.36 B.1.1.529.5.2.37 Alias of B.1.1.529.5.2.37, found mainly in USA and India, from pango-designation issue #1117 BA.5.2.37 B.1.1.529.5.2.38 Alias of B.1.1.529.5.2.38, S:T430I BA.5.2.38 B.1.1.529.5.2.39 Alias of B.1.1.529.5.2.39, USA, S:R346T BA.5.2.39 B.1.1.529.5.2.3 Alias of B.1.1.529.5.2.3, UK lineage BA.5.2.3 B.1.1.529.5.2.40 Alias of B.1.1.529.5.2.40, Sweden, S:N450D BA.5.2.40 B.1.1.529.5.2.41 Alias of B.1.1.529.5.2.41, found mainly in Sweden, from pango-designation issue #1328 BA.5.2.41 B.1.1.529.5.2.42 Alias of B.1.1.529.5.2.42, found mainly in Australia, from pango-designation issue #1266 BA.5.2.42 B.1.1.529.5.2.43 Alias of B.1.1.529.5.2.43, found mainly in SouthKorea, from pango-designation issue #1312 BA.5.2.43 B.1.1.529.5.2.44 Alias of B.1.1.529.5.2.44, Indonesia/Malaysia/SouthKorea/global, ORF1a:L2564F BA.5.2.44 B.1.1.529.5.2.45 Alias of B.1.1.529.5.2.45, found mainly in Australia, from pango-designation issue #1383 BA.5.2.45 B.1.1.529.5.2.46 Alias of B.1.1.529.5.2.46 found mainly in Japan, from pango-designation issue #1446 BA.5.2.46 B.1.1.529.5.2.47 Alias of B.1.1.529.5.2.47 found mainly in Indonesia, Australia, and USA, from pango-designation issue #1496 BA.5.2.47 B.1.1.529.5.2.48 Alias of B.1.1.529.5.2.48, China, C2710T, C8626T, T17208C, from pango-designation issue #1471 BA.5.2.48 B.1.1.529.5.2.49 Alias of B.1.1.529.5.2.49, China, S:T883I, A14673G, T16456C, from #1480 BA.5.2.49 B.1.1.529.5.2.4 Alias of B.1.1.529.5.2.4, Australia lineage BA.5.2.4 B.1.1.529.5.2.5 Alias of B.1.1.529.5.2.5, Indonesia lineage BA.5.2.5 B.1.1.529.5.2.6 Alias of B.1.1.529.5.2.6, global lineage, S:R346T, from pango-designation issue #870 BA.5.2.6 B.1.1.529.5.2.7 Alias of B.1.1.529.5.2.7, global lineage, from pango-designation issue #924 BA.5.2.7 B.1.1.529.5.2.8 Alias of B.1.1.529.5.2.8, Israel lineage BA.5.2.8 B.1.1.529.5.2.9 Alias of B.1.1.529.5.2.9, USA lineage BA.5.2.9 B.1.1.529.5.2 Alias of B.1.1.529.5.2, mainly found in South Africa, England and USA, from pango-designation issue #551 BA.5.2 B.1.1.529.5.3.1 Alias of B.1.1.529.5.3.1, mainly found in South Africa, Austria, and England, from pango-designation issue #625 BA.5.3.1 B.1.1.529.5.3.2 Alias of B.1.1.529.5.3.2, mainly found in Germany, from pango-designation issue #697 BA.5.3.2 B.1.1.529.5.3.3 Alias of B.1.1.529.5.3.3, UK lineage BA.5.3.3 B.1.1.529.5.3.4 Alias of B.1.1.529.5.3.4, Germany lineage BA.5.3.4 B.1.1.529.5.3.5 Alias of B.1.1.529.5.3.5, mainly found in South Africa, from pango-designation issue #1042 BA.5.3.5 B.1.1.529.5.3 Alias of B.1.1.529.5.3, mainly found in Germany and South Africa, from pango-designation issue #550 BA.5.3 B.1.1.529.5.5.1 Alias of B.1.1.529.5.5.1, mainly found in USA, from pango-designation issue #873 BA.5.5.1 B.1.1.529.5.5.2 Alias of B.1.1.529.5.5.2, mainly found in USA, Canada, England and Ireland, from pango-designation issue #938 BA.5.5.2 B.1.1.529.5.5.3 Alias of B.1.1.529.5.5.3, USA lineage, from pango-designation issue #1015 BA.5.5.3 B.1.1.529.5.5 Alias of B.1.1.529.5.5, mainly found in USA, from pango-designation issue #656 BA.5.5 B.1.1.529.5.6.1 Alias of B.1.1.529.5.6.1, Peru lineage BA.5.6.1 B.1.1.529.5.6.2 Alias of B.1.1.529.5.6.2, mainly found in USA, Belgium and Mexico, from pango-designation issue #903 BA.5.6.2 B.1.1.529.5.6.3 Alias of B.1.1.529.5.6.3, mainly found in England, from pango-designation issue #1118 BA.5.6.3 B.1.1.529.5.6.4 Alias of B.1.1.529.5.6.4, found in USA and Europe, from pango-designation issue #1191 BA.5.6.4 B.1.1.529.5.6 Alias of B.1.1.529.5.6, USA lineage BA.5.6 B.1.1.529.5.7 Alias of B.1.1.529.5.7, Australia lineage BA.5.7 B.1.1.529.5.8 Alias of B.1.1.529.5.8, mainly found in England, USA, Denmark and Scotland, from pango-designation issue #743 BA.5.8 B.1.1.529.5.9 Alias of B.1.1.529.5.9, mainly found in Germany, Switzerland and Denmark, from pango-designation issue #753 BA.5.9 B.1.1.529.5 Alias of B.1.1.529.5, from pango-designation issue #517 BA.5 B.1.621.1.2 Alias of B.1.621.1.2, from pango-designation issue #232 BB.2 B.1.1.529.1.1.1.1 Alias of B.1.1.529.1.1.1.1, Japan lineage BC.1 B.1.1.529.1.1.1.2 Alias of B.1.1.529.1.1.1.2, Peru lineage, from pango-designation issue #570 BC.2 B.1.1.529.1.17.2.1 Alias of B.1.1.529.1.17.2.1, UK lineage, from pango-designation issue #461 BD.1 B.1.1.529.5.3.1.1.1.1 Alias of B.1.1.529.5.3.1.1.1.1, found globally, from pango-designation issue #931 BE.1.1.1 B.1.1.529.5.3.1.1.1.2 Alias of B.1.1.529.5.3.1.1.1.2, Germany lineage, defined by ORF9b:S50L BE.1.1.2 B.1.1.529.5.3.1.1.1 Alias of B.1.1.529.5.3.1.1.1, Germany lineage BE.1.1 B.1.1.529.5.3.1.1.2.1 Alias of B.1.1.529.5.3.1.1.2.1, Panama, Canada, USA, defined by S:V445A, from issue #1095 BE.1.2.1 B.1.1.529.5.3.1.1.2 Alias of B.1.1.529.5.3.1.1.2, mainly found in Costa Rica and USA, from pango-designation issue #923 BE.1.2 B.1.1.529.5.3.1.1.3 Alias of B.1.1.529.5.3.1.1.3, Finland and Estonia lineage BE.1.3 B.1.1.529.5.3.1.1.4.1 Alias of B.1.1.529.5.3.1.1.4.1, S:A701V BE.1.4.1 B.1.1.529.5.3.1.1.4.2 Alias of B.1.1.529.5.3.1.1.4.2, S:R346T BE.1.4.2 B.1.1.529.5.3.1.1.4.3 Alias of B.1.1.529.5.3.1.1.4.3, Mexico, S:V445A BE.1.4.3 B.1.1.529.5.3.1.1.4.4 Alias of B.1.1.529.5.3.1.1.4.4, S:L176F BE.1.4.4 B.1.1.529.5.3.1.1.4 Alias of B.1.1.529.5.3.1.1.4, America lineage, ORF1b:V1787I BE.1.4 B.1.1.529.5.3.1.10 Alias of B.1.1.529.5.3.1.10, S:K444T, S:N460K, mainly Brazil, from issue #1411 BE.10 B.1.1.529.5.3.1.1 Alias of B.1.1.529.5.3.1.1, mainly found in South Africa, Austria and England, from pango-designation issue #625 BE.1 B.1.1.529.5.3.1.2 Alias of B.1.1.529.5.3.1.2, Belgium lineage BE.2 B.1.1.529.5.3.1.3 Alias of B.1.1.529.5.3.1.3, USA lineage BE.3 B.1.1.529.5.3.1.4.1.1 Alias of B.1.1.529.5.3.1.4.1.1, Bangladesh, defined by S:K444R, from issue #1115 BE.4.1.1 B.1.1.529.5.3.1.4.1 Alias of B.1.1.529.5.3.1.4.1, Bangladesh, defined by S:P209L, S:R346T, from issue #1115 BE.4.1 B.1.1.529.5.3.1.4.2 Alias of B.1.1.529.5.3.1.4.2, Bangladesh, defined by S:K444N & S:N460K, from issue #1114 BE.4.2 B.1.1.529.5.3.1.4 Alias of B.1.1.529.5.3.1.4, Bangladesh, defined by ORF1a:T3308N, from issue #1115 BE.4 B.1.1.529.5.3.1.5 Alias of B.1.1.529.5.3.1.5, South Africa, S:R346T, #1281 BE.5 B.1.1.529.5.3.1.6 Alias of B.1.1.529.5.3.1.6, France, S:R346S BE.6 B.1.1.529.5.3.1.7 Alias of B.1.1.529.5.3.1.7, South Africa, S:R346T, #1280 BE.7 B.1.1.529.5.3.1.8 Alias of B.1.1.529.5.3.1.8, South Africa, S:R346T, #1278 BE.8 B.1.1.529.5.3.1.9 Alias of B.1.1.529.5.3.1.9, found mainly in Brazil, from pango-designation issue #1302 BE.9 B.1.1.529.5.2.1.1.1 Alias of B.1.1.529.5.2.1.1.1, USA lineage BF.1.1 B.1.1.529.5.2.1.10.1 Alias of B.1.1.529.5.2.1.10.1, found mainly in USA and Mexico, from pango-designation issue #1442 BF.10.1 B.1.1.529.5.2.1.10 Alias of B.1.1.529.5.2.1.10, USA lineage BF.10 B.1.1.529.5.2.1.11.1 Alias of B.1.1.529.5.2.1.11.1, England, S:S1252F BF.11.1 B.1.1.529.5.2.1.11.2 Alias of B.1.1.529.5.2.1.11.2, Wales, S:K147N BF.11.2 B.1.1.529.5.2.1.11.3 Alias of B.1.1.529.5.2.1.11.3, ORF1a:L122F BF.11.3 B.1.1.529.5.2.1.11.4 Alias of B.1.1.529.5.2.1.11.4, England, S:S704L BF.11.4 B.1.1.529.5.2.1.11.5 Alias of B.1.1.529.5.2.1.11.5, England, ORF8:I121L BF.11.5 B.1.1.529.5.2.1.11 Alias of B.1.1.529.5.2.1.11, mainly found in England, S:R346T, from pango-designation issue #837 BF.11 B.1.1.529.5.2.1.12 Alias of B.1.1.529.5.2.1.12, mainly found Austria, Brazil, and England, from pango-designation issue #752 BF.12 B.1.1.529.5.2.1.13 Alias of B.1.1.529.5.2.1.13, mainly found in USA, from pango-designation issue #883 BF.13 B.1.1.529.5.2.1.14 Alias of B.1.1.529.5.2.1.14, mainly found in Austria, from pango-designation issue #843 BF.14 B.1.1.529.5.2.1.15 Alias of B.1.1.529.5.2.1.15, Sri Lanka lineage, from pango-designation issue #893 BF.15 B.1.1.529.5.2.1.16 Alias of B.1.1.529.5.2.1.16, found in USA, from pango-designation issue #942 BF.16 B.1.1.529.5.2.1.17 Alias of B.1.1.529.5.2.1.17, Australia lineage BF.17 B.1.1.529.5.2.1.18 Alias of B.1.1.529.5.2.1.18, Australia lineage BF.18 B.1.1.529.5.2.1.19 Alias of B.1.1.529.5.2.1.19, Greece lineage BF.19 B.1.1.529.5.2.1.1 Alias of B.1.1.529.5.2.1.1, mainly found in England, Denmark, Spain and Scotland, from pango-designation issue #618 BF.1 B.1.1.529.5.2.1.20 Alias of B.1.1.529.5.2.1.20, lineage in Kenya and other countries BF.20 B.1.1.529.5.2.1.21 Alias of B.1.1.529.5.2.1.21, USA lineage BF.21 B.1.1.529.5.2.1.22 Alias of B.1.1.529.5.2.1.22, mainly found in Japan, from pango-designation issue #1010 BF.22 B.1.1.529.5.2.1.23 Alias of B.1.1.529.5.2.1.23, mainly found in Czechia, from pango-designation issue #1036 BF.23 B.1.1.529.5.2.1.24 Alias of B.1.1.529.5.2.1.24, mainly found in Indonesia, defined by ORF1a:G683C on S:1020S branch BF.24 B.1.1.529.5.2.1.25 Alias of B.1.1.529.5.2.1.25, USA lineage, defined by S:445A and C18657T BF.25 B.1.1.529.5.2.1.26 Alias of B.1.1.529.5.2.1.26, North America lineage, defined by ORF1b:G376S, issue #1142 BF.26 B.1.1.529.5.2.1.27 Alias of B.1.1.529.5.2.1.27, Singapore lineage, defined by ORF1a:A2784V, issue #1140 BF.27 B.1.1.529.5.2.1.28 Alias of B.1.1.529.5.2.1.28, Singapore lineage, defined by ORF1a:Q44L, issue #1141 BF.28 B.1.1.529.5.2.1.29 Alias of B.1.1.529.5.2.1.29, mainly found in Denmark and USA, from pango-designation issue #1162 BF.29 B.1.1.529.5.2.1.2 Alias of B.1.1.529.5.2.1.2, Denmark lineage BF.2 B.1.1.529.5.2.1.3.1 Alias of B.1.1.529.5.2.1.3.1, mainly found India, Singapore, and USA, from pango-designation issue #825 BF.3.1 B.1.1.529.5.2.1.30 Alias of B.1.1.529.5.2.1.30, South Africa/England, defined by S:R346T after C25916T, C14599T BF.30 B.1.1.529.5.2.1.31.1 Alias of B.1.1.529.5.2.1.31.1, Chile, S:A701V and S:S247N/S:Y248- BF.31.1 B.1.1.529.5.2.1.31 Alias of B.1.1.529.5.2.1.31, Chile, 23758T BF.31 B.1.1.529.5.2.1.32 Alias of B.1.1.529.5.2.1.32, found mainly in USA, from pango-designation issue #1250 BF.32 B.1.1.529.5.2.1.33 Alias of B.1.1.529.5.2.1.33, Brazil/France, S:R346I, S:N460K BF.33 B.1.1.529.5.2.1.34 Alias of B.1.1.529.5.2.1.34, found mainly in UK and Canada, from pango-designation issue #1233 BF.34 B.1.1.529.5.2.1.3 Alias of B.1.1.529.5.2.1.3, India lineage BF.3 B.1.1.529.5.2.1.4 Alias of B.1.1.529.5.2.1.4, mainly found in England, from pango-designation issue #788 BF.4 B.1.1.529.5.2.1.5.1 Alias of B.1.1.529.5.2.1.5.1 found mainly in Japan and Israel, from pango-designation issue #1475 BF.5.1 B.1.1.529.5.2.1.5.2 Alias of B.1.1.529.5.2.1.5.2 found mainly in Japan, from pango-designation issue #1476 BF.5.2 B.1.1.529.5.2.1.5 Alias of B.1.1.529.5.2.1.5, Israel lineage BF.5 B.1.1.529.5.2.1.6 Alias of B.1.1.529.5.2.1.6, mainly found in England and Scotland, from pango-designation issue #821 BF.6 B.1.1.529.5.2.1.7.10 Alias of B.1.1.529.5.2.1.7.10, Europe, S:Q1201K BF.7.10 B.1.1.529.5.2.1.7.11 Alias of B.1.1.529.5.2.1.7.11, Europe, S:D1260Y BF.7.11 B.1.1.529.5.2.1.7.12 Alias of B.1.1.529.5.2.1.7.12, Europe, S:A942S BF.7.12 B.1.1.529.5.2.1.7.13.1 Alias of B.1.1.529.5.2.1.7.13.1, Europe, S:T430I, S:P681Y BF.7.13.1 B.1.1.529.5.2.1.7.13.2 Alias of B.1.1.529.5.2.1.7.13.2, Poland, S:A653V BF.7.13.2 B.1.1.529.5.2.1.7.13 Alias of B.1.1.529.5.2.1.7.13, Belgium, ORF1a:H388Y, ORF1a:H1160Y, BF.7.13 B.1.1.529.5.2.1.7.14 Alias of B.1.1.529.5.2.1.7.14, China, S:C1243F, from issue #1470 BF.7.14 B.1.1.529.5.2.1.7.15 Alias of B.1.1.529.5.2.1.7.15, Japan, S:G257D & ORF1a:A1812V, from issue #1358 BF.7.15 B.1.1.529.5.2.1.7.1 Alias of B.1.1.529.5.2.1.7.1, mainly found in Germany, S:G261V, from pango-designation issue #1132 BF.7.1 B.1.1.529.5.2.1.7.2 Alias of B.1.1.529.5.2.1.7.2, Denmark, S:H1101Y and S:V486I, issue #1216 BF.7.2 B.1.1.529.5.2.1.7.3 Alias of B.1.1.529.5.2.1.7.3, France/Czechia, S:K182E BF.7.3 B.1.1.529.5.2.1.7.4.1 Alias of B.1.1.529.5.2.1.7.4.1, found mainly in USA and Netherlands, from pango-designation issue #1253 BF.7.4.1 B.1.1.529.5.2.1.7.4.2 Alias of B.1.1.529.5.2.1.7.4.2, Europe BF.7.4.2 B.1.1.529.5.2.1.7.4 Alias of B.1.1.529.5.2.1.7.4, Europe, ORF8:H17Y BF.7.4 B.1.1.529.5.2.1.7.5.1 Alias of B.1.1.529.5.2.1.7.5.1, found mainly in Germany and Denmark, from pango-designation issue #1317 BF.7.5.1 B.1.1.529.5.2.1.7.5 Alias of B.1.1.529.5.2.1.7.5, Europe, ORF1b:P1427L BF.7.5 B.1.1.529.5.2.1.7.6 Alias of B.1.1.529.5.2.1.7.6, Europe, ORF3a:E239D BF.7.6 B.1.1.529.5.2.1.7.7 Alias of B.1.1.529.5.2.1.7.7, Europe, S:D80G BF.7.7 B.1.1.529.5.2.1.7.8 Alias of B.1.1.529.5.2.1.7.8, Europe, S:T883I BF.7.8 B.1.1.529.5.2.1.7.9 Alias of B.1.1.529.5.2.1.7.9, Europe, S:Q677H BF.7.9 B.1.1.529.5.2.1.7 Alias of B.1.1.529.5.2.1.7, mainly found in Belgium, England and Denmark, from pango-designation issue #827 BF.7 B.1.1.529.5.2.1.8 Alias of B.1.1.529.5.2.1.8, USA lineage BF.8 B.1.1.529.5.2.1.9 Alias of B.1.1.529.5.2.1.9, Canada lineage BF.9 B.1.1.529.2.12.1.1 Alias of B.1.1.529.2.12.1.1, Peru lineage, from pango-designation issue #679 BG.1 B.1.1.529.2.12.1.2 Alias of B.1.1.529.2.12.1.2, mainly found in USA, and Denmark, from pango-designation issue #767 BG.2 B.1.1.529.2.12.1.3 Alias of B.1.1.529.2.12.1.3, mainly found in Peru, from pango-designation issue #784 BG.3 B.1.1.529.2.12.1.4 Alias of B.1.1.529.2.12.1.4, Israel lineage BG.4 B.1.1.529.2.12.1.5 Alias of B.1.1.529.2.12.1.5, mainly found in USA, from pango-designation issue #763 BG.5 B.1.1.529.2.12.1.6 Alias of B.1.1.529.2.12.1.6, Peru lineage, from pango-designation issue #836 BG.6 B.1.1.529.2.12.1.7 Alias of B.1.1.529.2.12.1.7, found in Peru, from pango-designation issue #1157 BG.7 B.1.1.529.2.38.3.1 Alias of B.1.1.529.2.38.3.1, mainly found in India, from pango-designation issue #913 BH.1 B.1.1.529.2.10.1.1 Alias of B.1.1.529.2.10.1.1, mainly found in India (West Bengal), from pango-designation issue #915 BJ.1 B.1.1.529.5.1.10.1 Alias of B.1.1.529.5.1.10.1, mainly found in USA, and Canada, from pango-designation issue #901 BK.1 B.1.1.529.2.75.1.1.1 Alias of B.1.1.529.2.75.1.1.1, from pango-designation issue #1079, defined by S:G614S BL.1.1 B.1.1.529.2.75.1.1.2 Alias of B.1.1.529.2.75.1.1.2, mainly Austria, issue #1066, defined by S:G261D, S:V308L BL.1.2 B.1.1.529.2.75.1.1.3 Alias of B.1.1.529.2.75.1.1.3, Switzerland, Israel, Canada, issue #1124, defined by S:F490L BL.1.3 B.1.1.529.2.75.1.1.4 Alias of B.1.1.529.2.75.1.1.4, India/England/New Zealand, defined by S:F490V BL.1.4 B.1.1.529.2.75.1.1 Alias of B.1.1.529.2.75.1.1, mainly found in India from pango-designation issue #944, S:R346T on polytomy BL.1 B.1.1.529.2.75.1.2.1 Alias of B.1.1.529.2.75.1.2.1, Australia/Belgium, defined by S:K182E BL.2.1 B.1.1.529.2.75.1.2 Alias of B.1.1.529.2.75.1.2, mainly found in India, defined by S:R346T on A26612T branch BL.2 B.1.1.529.2.75.1.3 Alias of B.1.1.529.2.75.1.3, mainly found in India, defined by ORF1a:P2685S on A26612T branch BL.3 B.1.1.529.2.75.1.4 Alias of B.1.1.529.2.75.1.4, mainly found in India, defined by ORF7a:P45L with 11224T and 22720G branch BL.4 B.1.1.529.2.75.1.5 Alias of B.1.1.529.2.75.1.5, mainly found in Denmark, from pango-designation issue #1105 BL.5 B.1.1.529.2.75.1.6 Alias of B.1.1.529.2.75.1.6, mainly South Korea, S:R346T, S:V445A, from issue #1531 BL.6 B.1.1.529.2.75.3.1.1.1 Alias of B.1.1.529.2.75.3.1.1.1, mainly found in India (West Bengal), defined by S:490S BM.1.1.1 B.1.1.529.2.75.3.1.1.2 Alias of B.1.1.529.2.75.3.1.1.2, England, S:T883I, S:S939F, S:P1079T BM.1.1.2 B.1.1.529.2.75.3.1.1.3 Alias of B.1.1.529.2.75.3.1.1.3, India, defined by ORF10:A8V BM.1.1.3 B.1.1.529.2.75.3.1.1.4 Alias of B.1.1.529.2.75.3.1.1.4, S:K356T & S:T572I, from #1438 BM.1.1.4 B.1.1.529.2.75.3.1.1.5 Alias of B.1.1.529.2.75.3.1.1.5, England/Belgium/France, S:N185S & S:L452R BM.1.1.5 B.1.1.529.2.75.3.1.1 Alias of B.1.1.529.2.75.3.1.1, mainly found in India (West Bengal), defined by S:346T BM.1.1 B.1.1.529.2.75.3.1 Alias of B.1.1.529.2.75.3.1, mainly found in India, pango-designation issue #965 BM.1 B.1.1.529.2.75.3.2.1 Alias of B.1.1.529.2.75.3.2.1, India, defined by S:F486V BM.2.1 B.1.1.529.2.75.3.2.2 Alias of B.1.1.529.2.75.3.2.2, Japan/Israel, defined by S:L455S BM.2.2 B.1.1.529.2.75.3.2.3 Alias of B.1.1.529.2.75.3.2.3, India/Singapore, defined by S:F486I BM.2.3 B.1.1.529.2.75.3.2 Alias of B.1.1.529.2.75.3.2, mainly found in India (Telangana), defined by S:346T BM.2 B.1.1.529.2.75.3.3 Alias of B.1.1.529.2.75.3.3, found in Nepal and globally, defined by ORF1b:P1652S BM.3 B.1.1.529.2.75.3.4.1.1 Alias of B.1.1.529.2.75.3.4.1.1, mainly found in India, defined by S:346T BM.4.1.1 B.1.1.529.2.75.3.4.1 Alias of B.1.1.529.2.75.3.4.1, mainly found in India, defined by S:F486S, from pango-designation issue #957 BM.4.1 B.1.1.529.2.75.3.4 Alias of B.1.1.529.2.75.3.4, mainly found in India, defined by ORF1a:Q1198K, from pango-designation issue #957 BM.4 B.1.1.529.2.75.3.5 Alias of B.1.1.529.2.75.3.5, mainly found in India, defined by S:L455S, from pango-designation issue #1047 BM.5 B.1.1.529.2.75.3.6 Alias of B.1.1.529.2.75.3.6, India, defined by S:G75V followed by S:L455S BM.6 B.1.1.529.2.75.5.1.1.1 Alias of B.1.1.529.2.75.5.1.1.1, Austria, S:N185D BN.1.1.1 B.1.1.529.2.75.5.1.1 Alias of B.1.1.529.2.75.5.1.1, India/Austria, S:S494P BN.1.1 B.1.1.529.2.75.5.1.2.1 Alias of B.1.1.529.2.75.5.1.2.1, England/Portugal, S:T470N BN.1.2.1 B.1.1.529.2.75.5.1.2 Alias of B.1.1.529.2.75.5.1.2, Singapore/England, E:D72G BN.1.2 B.1.1.529.2.75.5.1.3.1 Alias of B.1.1.529.2.75.5.1.3.1, found mainly in Israel, England and Denmark, from pango-designation issue #1257 BN.1.3.1 B.1.1.529.2.75.5.1.3.2 Alias of B.1.1.529.2.75.5.1.3.2, S:V445A found mainly in Japan, from pango-designation issue #1397 BN.1.3.2 B.1.1.529.2.75.5.1.3.3 Alias of B.1.1.529.2.75.5.1.3.3, S:E147Q, mainly Europe BN.1.3.3 B.1.1.529.2.75.5.1.3.4 Alias of B.1.1.529.2.75.5.1.3.4, S:V445A, Japan/England/NZ/Russia BN.1.3.4 B.1.1.529.2.75.5.1.3 Alias of B.1.1.529.2.75.5.1.3, India, ORF3a:T229I BN.1.3 B.1.1.529.2.75.5.1.4.1 Alias of B.1.1.529.2.75.5.1.4.1, S:G261V & S:T678I, from #1417 BN.1.4.1 B.1.1.529.2.75.5.1.4 Alias of B.1.1.529.2.75.5.1.4, India, 27501C BN.1.4 B.1.1.529.2.75.5.1.5.1 Alias of B.1.1.529.2.75.5.1.5.1, New Zealand, S:S514T BN.1.5.1 B.1.1.529.2.75.5.1.5 Alias of B.1.1.529.2.75.5.1.5, ORF1a:S2103F BN.1.5 B.1.1.529.2.75.5.1.6 Alias of B.1.1.529.2.75.5.1.6, S:D1139H BN.1.6 B.1.1.529.2.75.5.1.7 Alias of B.1.1.529.2.75.5.1.7, England, S:M177T, S:H1101Y BN.1.7 B.1.1.529.2.75.5.1.8 Alias of B.1.1.529.2.75.5.1.8, Iceland/USA, S:A475V BN.1.8 B.1.1.529.2.75.5.1.9 Alias of B.1.1.529.2.75.5.1.9, found mainly in Indonesia, from pango-designation issue #1327 BN.1.9 B.1.1.529.2.75.5.1 Alias of B.1.1.529.2.75.5.1, mainly found in India, pango-designation issue #994 BN.1 B.1.1.529.2.75.5.2.1 Alias of B.1.1.529.2.75.5.2.1, mainly USA and Canada lineage, defined by S:H49Y and S:F490S BN.2.1 B.1.1.529.2.75.5.2 Alias of B.1.1.529.2.75.5.2, mainly found in India, pango-designation issue #1021 BN.2 B.1.1.529.2.75.5.3.1 Alias of B.1.1.529.2.75.5.3.1, South Korea/Austria/Israel/Belgium, defined by S:F490S BN.3.1 B.1.1.529.2.75.5.3 Alias of B.1.1.529.2.75.5.3, defined by S:N450D on ORF1a:392D branch BN.3 B.1.1.529.2.75.5.4 Alias of B.1.1.529.2.75.5.4, Netherlands/Germany, defined by S:F490S on ORF1a:392D branch BN.4 B.1.1.529.2.75.5.5 Alias of B.1.1.529.2.75.5.5, India, defined by ORF1a:V2995M BN.5 B.1.1.529.2.75.5.6 Alias of B.1.1.529.2.75.5.6, India, defined by ORF1a:T3959A BN.6 B.1.1.529.2.3.16.1 Alias of B.1.1.529.2.3.16.1, Oceania/South East Asia lineage, from pango-designation issue #1009 BP.1 B.1.1.529.5.3.1.1.1.1.1.1.10 Alias of B.1.1.529.5.3.1.1.1.1.1.1.10, S:Y144-, T16413C, Denmark/Germany BQ.1.1.10 B.1.1.529.5.3.1.1.1.1.1.1.11 Alias of B.1.1.529.5.3.1.1.1.1.1.1.11, S:S494P BQ.1.1.11 B.1.1.529.5.3.1.1.1.1.1.1.12 Alias of B.1.1.529.5.3.1.1.1.1.1.1.12, France/US, S:S494P, on ORF1a:T4368I branch BQ.1.1.12 B.1.1.529.5.3.1.1.1.1.1.1.13 Alias of B.1.1.529.5.3.1.1.1.1.1.1.13, Denmark/Israel/Switzerland/France, E:V62F and S:Y144- BQ.1.1.13 B.1.1.529.5.3.1.1.1.1.1.1.14 Alias of B.1.1.529.5.3.1.1.1.1.1.1.14, England, G23608T BQ.1.1.14 B.1.1.529.5.3.1.1.1.1.1.1.15 Alias of B.1.1.529.5.3.1.1.1.1.1.1.15, Spain, T18897C BQ.1.1.15 B.1.1.529.5.3.1.1.1.1.1.1.16 Alias of B.1.1.529.5.3.1.1.1.1.1.1.16, England, S:Q607H BQ.1.1.16 B.1.1.529.5.3.1.1.1.1.1.1.17 Alias of B.1.1.529.5.3.1.1.1.1.1.1.17, France, ORF1a:S2273F BQ.1.1.17 B.1.1.529.5.3.1.1.1.1.1.1.18 Alias of B.1.1.529.5.3.1.1.1.1.1.1.18, France, C6541T BQ.1.1.18 B.1.1.529.5.3.1.1.1.1.1.1.19 Alias of B.1.1.529.5.3.1.1.1.1.1.1.19, England, N:Q380H BQ.1.1.19 B.1.1.529.5.3.1.1.1.1.1.1.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.1, Europe, ORF1b:V1639A BQ.1.1.1 B.1.1.529.5.3.1.1.1.1.1.1.20 Alias of B.1.1.529.5.3.1.1.1.1.1.1.20, Denmark, S:144- and ORF3a:H204Y BQ.1.1.20 B.1.1.529.5.3.1.1.1.1.1.1.21 Alias of B.1.1.529.5.3.1.1.1.1.1.1.21, Switzerland/France, S:144- and A17946G BQ.1.1.21 B.1.1.529.5.3.1.1.1.1.1.1.22 Alias of B.1.1.529.5.3.1.1.1.1.1.1.22, Australia/England/Denmark, S:144- and C913A BQ.1.1.22 B.1.1.529.5.3.1.1.1.1.1.1.23 Alias of B.1.1.529.5.3.1.1.1.1.1.1.23, France, ORF3a:V97I, S:Y144-, on G6421T branch BQ.1.1.23 B.1.1.529.5.3.1.1.1.1.1.1.24 Alias of B.1.1.529.5.3.1.1.1.1.1.1.24, England, 11941T, S:Y144- BQ.1.1.24 B.1.1.529.5.3.1.1.1.1.1.1.25 Alias of B.1.1.529.5.3.1.1.1.1.1.1.25, USA/Canada, S:F490S and S:Y144-, from issue #1350 BQ.1.1.25 B.1.1.529.5.3.1.1.1.1.1.1.26 Alias of B.1.1.529.5.3.1.1.1.1.1.1.26, S:E471Q BQ.1.1.26 B.1.1.529.5.3.1.1.1.1.1.1.27 Alias of B.1.1.529.5.3.1.1.1.1.1.1.27, France/USA, S:G181R, ORF1a:F2864L, on G6421T branch BQ.1.1.27 B.1.1.529.5.3.1.1.1.1.1.1.28 Alias of B.1.1.529.5.3.1.1.1.1.1.1.28, S:P251L, ORF1b:P976S, on C18828T branch BQ.1.1.28 B.1.1.529.5.3.1.1.1.1.1.1.29 Alias of B.1.1.529.5.3.1.1.1.1.1.1.29, S:Q613H BQ.1.1.29 B.1.1.529.5.3.1.1.1.1.1.1.2 Alias of B.1.1.529.5.3.1.1.1.1.1.1.2, England, S:D253G, from issue #1209 BQ.1.1.2 B.1.1.529.5.3.1.1.1.1.1.1.30 Alias of B.1.1.529.5.3.1.1.1.1.1.1.30, Canada, S:V445A BQ.1.1.30 B.1.1.529.5.3.1.1.1.1.1.1.31 Alias of B.1.1.529.5.3.1.1.1.1.1.1.31, Indonesia/global, S:S256L BQ.1.1.31 B.1.1.529.5.3.1.1.1.1.1.1.32 Alias of B.1.1.529.5.3.1.1.1.1.1.1.32 found mainly in USA, S:153I, S:144-, from pango-designation issue #1402 BQ.1.1.32 B.1.1.529.5.3.1.1.1.1.1.1.34 Alias of B.1.1.529.5.3.1.1.1.1.1.1.34, England, S:144- & S:494P, from issue #1483 BQ.1.1.34 B.1.1.529.5.3.1.1.1.1.1.1.3 Alias of B.1.1.529.5.3.1.1.1.1.1.1.3, England, A15111G BQ.1.1.3 B.1.1.529.5.3.1.1.1.1.1.1.4 Alias of B.1.1.529.5.3.1.1.1.1.1.1.4, T29173C BQ.1.1.4 B.1.1.529.5.3.1.1.1.1.1.1.5 Alias of B.1.1.529.5.3.1.1.1.1.1.1.5, ORF1b:P2313L, ORF1a:V3855I BQ.1.1.5 B.1.1.529.5.3.1.1.1.1.1.1.6 Alias of B.1.1.529.5.3.1.1.1.1.1.1.6, ORF1a:L681F BQ.1.1.6 B.1.1.529.5.3.1.1.1.1.1.1.7 Alias of B.1.1.529.5.3.1.1.1.1.1.1.7, ORF1a:S216Y BQ.1.1.7 B.1.1.529.5.3.1.1.1.1.1.1.8 Alias of B.1.1.529.5.3.1.1.1.1.1.1.8, ORF1a:H374Y, ORF1a:L969F BQ.1.1.8 B.1.1.529.5.3.1.1.1.1.1.1.9 Alias of B.1.1.529.5.3.1.1.1.1.1.1.9, S:S151I BQ.1.1.9 B.1.1.529.5.3.1.1.1.1.1.10.1 Alias of B.1.1.529.5.3.1.1.1.1.1.10.1, Italy/England/Denmark, S:H146L, issue #1189 BQ.1.10.1 B.1.1.529.5.3.1.1.1.1.1.10 Alias of B.1.1.529.5.3.1.1.1.1.1.10, international lineage, 27600T BQ.1.10 B.1.1.529.5.3.1.1.1.1.1.11 Alias of B.1.1.529.5.3.1.1.1.1.1.11, international lineage, 29541T BQ.1.11 B.1.1.529.5.3.1.1.1.1.1.12 Alias of B.1.1.529.5.3.1.1.1.1.1.12, international lineage, 28849T BQ.1.12 B.1.1.529.5.3.1.1.1.1.1.13.1 Alias of B.1.1.529.5.3.1.1.1.1.1.13.1 found mainly in USA and Europe, from pango-designation issue #1400 BQ.1.13.1 B.1.1.529.5.3.1.1.1.1.1.13 Alias of B.1.1.529.5.3.1.1.1.1.1.13, international lineage, ORF1a:V627I BQ.1.13 B.1.1.529.5.3.1.1.1.1.1.14 Alias of B.1.1.529.5.3.1.1.1.1.1.14, international lineage, 18570A BQ.1.14 B.1.1.529.5.3.1.1.1.1.1.15 Alias of B.1.1.529.5.3.1.1.1.1.1.15, international lineage, ORF1a:L3116F BQ.1.15 B.1.1.529.5.3.1.1.1.1.1.16 Alias of B.1.1.529.5.3.1.1.1.1.1.16, international lineage, ORF1a:A540V BQ.1.16 B.1.1.529.5.3.1.1.1.1.1.17 Alias of B.1.1.529.5.3.1.1.1.1.1.17, Denmark/Germany, S:K444T mutated further to S:444M BQ.1.17 B.1.1.529.5.3.1.1.1.1.1.18 Alias of B.1.1.529.5.3.1.1.1.1.1.18, Denmark/Austria, E:P71S, then S:R346T and S:Y144- BQ.1.18 B.1.1.529.5.3.1.1.1.1.1.19 Alias of B.1.1.529.5.3.1.1.1.1.1.19, S:S494P BQ.1.19 B.1.1.529.5.3.1.1.1.1.1.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1, found globally, defining mutations ORF1b:N1191S and S:R346T, from issue #993 BQ.1.1 B.1.1.529.5.3.1.1.1.1.1.20 Alias of B.1.1.529.5.3.1.1.1.1.1.20, S:A348S BQ.1.20 B.1.1.529.5.3.1.1.1.1.1.21 Alias of B.1.1.529.5.3.1.1.1.1.1.21, England/France, S:R346S, S:Y144- BQ.1.21 B.1.1.529.5.3.1.1.1.1.1.22 Alias of B.1.1.529.5.3.1.1.1.1.1.22, Canada, S:R346T after C26681T BQ.1.22 B.1.1.529.5.3.1.1.1.1.1.23 Alias of B.1.1.529.5.3.1.1.1.1.1.23, Singapore/Indonesia/Australia, A2653G and S:Y144- BQ.1.23 B.1.1.529.5.3.1.1.1.1.1.24 Alias of B.1.1.529.5.3.1.1.1.1.1.24, South Africa, S:T240I, S:R346T, #1240 BQ.1.24 B.1.1.529.5.3.1.1.1.1.1.25.1 Alias of B.1.1.529.5.3.1.1.1.1.1.25.1, found mainly in USA, from pango-designation issue #1451 BQ.1.25.1 B.1.1.529.5.3.1.1.1.1.1.25 Alias of B.1.1.529.5.3.1.1.1.1.1.25, S:R346T, T8038C, T25569C, G26031A BQ.1.25 B.1.1.529.5.3.1.1.1.1.1.26.1 Alias of B.1.1.529.5.3.1.1.1.1.1.26.1, found mainly in Denmark, from pango-designation issue #1369 BQ.1.26.1 B.1.1.529.5.3.1.1.1.1.1.26 Alias of B.1.1.529.5.3.1.1.1.1.1.26, found mainly in Denmark, from pango-designation issue #1315 BQ.1.26 B.1.1.529.5.3.1.1.1.1.1.27 Alias of B.1.1.529.5.3.1.1.1.1.1.27, USA/England, S:V445A BQ.1.27 B.1.1.529.5.3.1.1.1.1.1.28 Alias of B.1.1.529.5.3.1.1.1.1.1.28, found mainly in USA, from pango-designation issue #1415 BQ.1.28 B.1.1.529.5.3.1.1.1.1.1.2 Alias of B.1.1.529.5.3.1.1.1.1.1.2, found globally, defined by S:I666V, from issue #1082 BQ.1.2 B.1.1.529.5.3.1.1.1.1.1.3 Alias of B.1.1.529.5.3.1.1.1.1.1.3, found globally, defined by S:E619Q, from issue #1082 BQ.1.3 B.1.1.529.5.3.1.1.1.1.1.4 Alias of B.1.1.529.5.3.1.1.1.1.1.4, England and Denmark, defined by S:R190T BQ.1.4 B.1.1.529.5.3.1.1.1.1.1.5 Alias of B.1.1.529.5.3.1.1.1.1.1.5, defined by ORF1b:T1076I BQ.1.5 B.1.1.529.5.3.1.1.1.1.1.6 Alias of B.1.1.529.5.3.1.1.1.1.1.6, US lineage, defined by ORF1a:G94C BQ.1.6 B.1.1.529.5.3.1.1.1.1.1.7 Alias of B.1.1.529.5.3.1.1.1.1.1.7, defined by S:L54F BQ.1.7 B.1.1.529.5.3.1.1.1.1.1.8.1 Alias of B.1.1.529.5.3.1.1.1.1.1.8.1, England/Australia, S:256L BQ.1.8.1 B.1.1.529.5.3.1.1.1.1.1.8.2 Alias of B.1.1.529.5.3.1.1.1.1.1.8.2, England/Scotland, S:A688V BQ.1.8.2 B.1.1.529.5.3.1.1.1.1.1.8 Alias of B.1.1.529.5.3.1.1.1.1.1.8, defined by ORF1a:S505F and S:Y144-, issue #1202 BQ.1.8 B.1.1.529.5.3.1.1.1.1.1.9 Alias of B.1.1.529.5.3.1.1.1.1.1.9, US lineage, defined by ORF1a:V2604I followed by S:346T (independent from BQ.1.1) BQ.1.9 B.1.1.529.5.3.1.1.1.1.1 Alias of B.1.1.529.5.3.1.1.1.1.1, Nigeria lineage, from pango-designation issue #993 BQ.1 B.1.1.529.5.3.1.1.1.1.2 Alias of B.1.1.529.5.3.1.1.1.1.2, international, S:A522P BQ.2 B.1.1.529.2.75.4.1.1 Alias of B.1.1.529.2.75.4.1.1, Austria/Australia, S:T307S BR.1.1 B.1.1.529.2.75.4.1.2 Alias of B.1.1.529.2.75.4.1.2, Italy/USA, S:F486S BR.1.2 B.1.1.529.2.75.4.1 Alias of B.1.1.529.2.75.4.1, mainly found in India (Karnataka), defined by S:K444M BR.1 B.1.1.529.2.75.4.2.1 Alias of B.1.1.529.2.75.4.2.1, found mainly in Australia, from pango-designation issue #1292 BR.2.1 B.1.1.529.2.75.4.2 Alias of B.1.1.529.2.75.4.2, found in Australia, defined by S:R346T and S:486I, from issue #1063 BR.2 B.1.1.529.2.75.4.3 Alias of B.1.1.529.2.75.4.3, India, Australia, Austria, defined by S:R346T, from issue #1063 BR.3 B.1.1.529.2.75.4.4 Alias of B.1.1.529.2.75.4.4, S:K444T and S:G446S reversion, from issue #1179 BR.4 B.1.1.529.2.3.2.1.1 Alias of B.1.1.529.2.3.2.1.1, Vietnam lineage, defined by S:K356T, from pango-designation issue #1097 BS.1.1 B.1.1.529.2.3.2.1.2 Alias of B.1.1.529.2.3.2.1.2, Vietnam lineage, defined by S:T430I BS.1.2 B.1.1.529.2.3.2.1 Alias of B.1.1.529.2.3.2.1, Vietnam lineage, from pango-designation issue #1052 BS.1 B.1.1.529.5.1.21.1 Alias of B.1.1.529.5.1.21.1, mainly found in Japan, from pango-designation issue #958 BT.1 B.1.1.529.5.1.21.2 Alias of B.1.1.529.5.1.21.2, mainly found in Denmark, Germany and France, from pango-designation issue #1192 BT.2 B.1.1.529.5.2.16.1 Alias of B.1.1.529.5.2.16.1, defined by S:444M and S:460K, from pango-designation issue #1065 BU.1 B.1.1.529.5.2.16.2 Alias of B.1.1.529.5.2.16.2, USA lineage, S:V445A BU.2 B.1.1.529.5.2.16.3 Alias of B.1.1.529.5.2.16.3, Guatemala, S:K147N, S:N450D BU.3 B.1.1.529.5.2.20.1 Alias of B.1.1.529.5.2.20.1, mainly found in Denmark, from pango-designation issue #1019, formerly BA.5.2.17 BV.1 B.1.1.529.5.2.20.2 Alias of B.1.1.529.5.2.20.2, defined by S:K444N BV.2 B.1.1.529.5.6.2.1.1 Alias of B.1.1.529.5.6.2.1.1, Mexico lineage, defined by S:V486A, issue #1341 BW.1.1 B.1.1.529.5.6.2.1 Alias of B.1.1.529.5.6.2.1, Mexico lineage, from pango-designation issue #1059, defined by S:460K BW.1 B.1.1.529.2.75.6.1.1.1 Alias of B.1.1.529.2.75.6.1.1.1, Europe, S:N185D, S:H207R, BY.1.1.1 B.1.1.529.2.75.6.1.1 Alias of B.1.1.529.2.75.6.1.1, S:L452R BY.1.1 B.1.1.529.2.75.6.1.2.1 Alias of B.1.1.529.2.75.6.1.2.1, Austria/England, S:S494P BY.1.2.1 B.1.1.529.2.75.6.1.2 Alias of B.1.1.529.2.75.6.1.2, Europe, 26828T BY.1.2 B.1.1.529.2.75.6.1 Alias of B.1.1.529.2.75.6.1, mainly found in India, defined by S:F486S on BA.2.75.6 BY.1 B.1.1.529.5.2.3.1 Alias of B.1.1.529.5.2.3.1, Denmark lineage, defined by S:Q677H BZ.1 One of the two original haplotypes of the pandemic(and first to be discovered) B B.1.1.1.1.1 Alias of B.1.1.1.1.1, Mozambique C.1.1 B.1.1.1.1.2 Alias of B.1.1.1.1.2, mostly South Africa, from pango-designation issue #139 C.1.2 B.1.1.1.10 Alias of B.1.1.1.10, Poland C.10 B.1.1.1.11 Alias of B.1.1.1.11 C.11 B.1.1.1.12 Alias of B.1.1.1.12, New Zealand C.12 B.1.1.1.13 Alias of B.1.1.1.13, Peruvian C.13 B.1.1.1.14 Alias of B.1.1.1.14, Peruvian C.14 B.1.1.1.16 Alias of B.1.1.1.16, Portugal originally, now pan-european C.16 B.1.1.1.17 Alias of B.1.1.1.17, Egypt C.17 B.1.1.1.18 Alias of B.1.1.1.18, Italy C.18 B.1.1.1.19 Alias of B.1.1.1.19, Denmark C.19 B.1.1.1.1 Alias of B.1.1.1.1, South Africa C.1 B.1.1.1.2.1 Alias of B.1.1.1.2.1, Aruba and Curacao C.2.1 B.1.1.1.20 Alias of B.1.1.1.20, Switzerland C.20 B.1.1.1.21 Alias of B.1.1.1.21, Spain C.21 B.1.1.1.22 Alias of B.1.1.1.22, Argentina C.22 B.1.1.1.23 Alias of B.1.1.1.23, Mainly USA C.23 B.1.1.1.25 Alias of B.1.1.1.25, Peru C.25 B.1.1.1.26 Alias of B.1.1.1.26, Chile C.26 B.1.1.1.27 Alias of B.1.1.1.27, England C.27 B.1.1.1.28 Alias of B.1.1.1.28, USA C.28 B.1.1.1.29 Alias of B.1.1.1.29, Chile C.29 B.1.1.1.2 Alias of B.1.1.1.2, South Africa and some European C.2 B.1.1.1.30.1 Alias of B.1.1.1.30.1, Denmark C.30.1 B.1.1.1.30 Alias of B.1.1.1.30, England C.30 B.1.1.1.31 Alias of B.1.1.1.31, USA C.31 B.1.1.1.32 Alias of B.1.1.1.32, Peru C.32 B.1.1.1.33 Alias of B.1.1.1.33, Peru C.33 B.1.1.1.34 Alias of B.1.1.1.34, Canada C.34 B.1.1.1.35 Alias of B.1.1.1.35, Central Europe, England C.35 B.1.1.1.36.1 Alias of B.1.1.1.36.1, Canada C.36.1 B.1.1.1.36.2 Alias of B.1.1.1.36.2, Switzerland C.36.2 B.1.1.1.36.3.1 Alias of B.1.1.1.36.3.1, Europe and USA lineage, from pango-designation issue #80 C.36.3.1 B.1.1.1.36.3 Alias of B.1.1.1.36.3, Europe and USA lineage, from pango-designation issue #80 C.36.3 B.1.1.1.36 Alias of B.1.1.1.36, Egypt mainly and other countries C.36 B.1.1.1.37.1 Alias of B.1.1.1.37.1, lineage outside of South America, from pango-designation issue #158 C.37.1 B.1.1.1.37 Alias of B.1.1.1.37, lineage in Peru, Chile, USA and Germany, from pango-designation issue #52 C.37 B.1.1.1.38 Alias of B.1.1.1.38, lineage in multiple countries, from pango-designation issue #150, formally B.1.1.527 C.38 B.1.1.1.39 Alias of B.1.1.1.39, Chile and Peru lineage C.39 B.1.1.1.3 Alias of B.1.1.1.3, England C.3 B.1.1.1.40 Alias of B.1.1.1.40, Peru lineage, from pango-designation issue #203 C.40 B.1.1.1.4 Alias of B.1.1.1.4, Peruvian C.4 B.1.1.1.5 Alias of B.1.1.1.5, Switzerland and Luxembourg C.5 B.1.1.1.6 Alias of B.1.1.1.6, South Africa C.6 B.1.1.1.7 Alias of B.1.1.1.7, Denmark C.7 B.1.1.1.8 Alias of B.1.1.1.8, Canada and DRC C.8 B.1.1.1.9 Alias of B.1.1.1.9, South Africa C.9 B.1.1.529.2.75.2.1 Alias of B.1.1.529.2.75.2.1, USA lineage, defined by S:604I and S:452R, pango-designation issue #1063 CA.1 B.1.1.529.2.75.2.2 Alias of B.1.1.529.2.75.2.2, international lineage, defined by S:S494P CA.2 B.1.1.529.2.75.2.3.1 Alias of B.1.1.529.2.75.2.3.1, USA, S:K444M, S:L452R CA.3.1 B.1.1.529.2.75.2.3 Alias of B.1.1.529.2.75.2.3, India, defined by N:M101I CA.3 B.1.1.529.2.75.2.4 Alias of B.1.1.529.2.75.2.4, New Zealand, S:F486L CA.4 B.1.1.529.2.75.2.5 Alias of B.1.1.529.2.75.2.5, USA, S:A260D, S:Q613H CA.5 B.1.1.529.2.75.2.6 Alias of B.1.1.529.2.75.2.6, India, ORF1a:Y196H CA.6 B.1.1.529.2.75.2.7 Alias of B.1.1.529.2.75.2.7, S:L452R after ORF1a:L3776I CA.7 B.1.1.529.2.75.9.1 Alias of B.1.1.529.2.75.9.1, England, defined by S:486V CB.1 B.1.1.529.5.3.1.1.1.2.1 Alias of B.1.1.529.5.3.1.1.1.2.1, Germany lineage, defined by S:N450D CC.1 B.1.1.529.5.2.31.1 Alias of B.1.1.529.5.2.31.1, US lineage, defined by S:G446D, S:A688T CD.1 B.1.1.529.5.2.31.2 Alias of B.1.1.529.5.2.31.2, US lineage, defined by S:A435S CD.2 B.1.1.529.5.2.33.1 Alias of B.1.1.529.5.2.33.1, UK lineage, defined by S:R346I CE.1 B.1.1.529.5.2.27.1 Alias of B.1.1.529.5.2.27.1, US and Mexico lineage, defined by S:K97T, originally designated as BA.5.2.15 from issue #1054 CF.1 B.1.1.529.5.2.26.1 Alias of B.1.1.529.5.2.26.1, mainly found in Germany, Poland and Denmark, from pango-designation issue #1126 CG.1 B.1.1.529.2.75.3.4.1.1.1.1.1 Alias of B.1.1.529.2.75.3.4.1.1.1.1.1, defined by S:N185D CH.1.1.1 B.1.1.529.2.75.3.4.1.1.1.1.2 Alias of B.1.1.529.2.75.3.4.1.1.1.1.2, defined by S:T883I, ORF1a:Y1846C, ORF1a:G2294S on T27576C branch CH.1.1.2 B.1.1.529.2.75.3.4.1.1.1.1.3 Alias of B.1.1.529.2.75.3.4.1.1.1.1.3, S:S255P, New Zealand/Australia/Hong Kong, from #1405 CH.1.1.3 B.1.1.529.2.75.3.4.1.1.1.1.4 Alias of B.1.1.529.2.75.3.4.1.1.1.1.4, S:H681R, Austria, from #1370 CH.1.1.4 B.1.1.529.2.75.3.4.1.1.1.1 Alias of B.1.1.529.2.75.3.4.1.1.1.1, defined by S:L452R, issue #1113 CH.1.1 B.1.1.529.2.75.3.4.1.1.1 Alias of B.1.1.529.2.75.3.4.1.1.1, defined by S:K444T, issue #1113 CH.1 B.1.1.529.2.75.3.4.1.1.2 Alias of B.1.1.529.2.75.3.4.1.1.2, defined by S:Q183H CH.2 B.1.1.529.2.75.3.4.1.1.3.1 Alias of B.1.1.529.2.75.3.4.1.1.3.1, S:S494P, Australia/Indonesia, from #1421 CH.3.1 B.1.1.529.2.75.3.4.1.1.3 Alias of B.1.1.529.2.75.3.4.1.1.3, defined by S:486P on ORF1b:Q2425R branch CH.3 B.1.1.529.2.75.3.1.1.1.1.1 Alias of B.1.1.529.2.75.3.1.1.1.1.1, S:V445A, Singapore/Malaysia/Japan, from issue #1384 CJ.1.1 B.1.1.529.2.75.3.1.1.1.1 Alias of B.1.1.529.2.75.3.1.1.1.1, S:S486P, #1171 CJ.1 B.1.1.529.5.2.24.1.1 Alias of B.1.1.529.5.2.24.1.1, found mainly in Japan, from pango-designation issue #1452 CK.1.1 B.1.1.529.5.2.24.1.2 Alias of B.1.1.529.5.2.24.1.2, Pakistan, S:G181V, S:R346T, from issue #1467 CK.1.2 B.1.1.529.5.2.24.1 Alias of B.1.1.529.5.2.24.1, Pakistan, defined by S:N460K, issue #1120 CK.1 B.1.1.529.5.2.24.2.1.1 Alias of B.1.1.529.5.2.24.2.1.1, defined by S:S255F CK.2.1.1 B.1.1.529.5.2.24.2.1 Alias of B.1.1.529.5.2.24.2.1, Pakistan, defined by S:N460K CK.2.1 B.1.1.529.5.2.24.2 Alias of B.1.1.529.5.2.24.2, Pakistan, defined by E:V62F CK.2 B.1.1.529.5.2.24.3 Alias of B.1.1.529.5.2.24.3, found mainly in Singapore and USA, from pango-designation issue #1121 CK.3 B.1.1.529.5.1.29.1 Alias of B.1.1.529.5.1.29.1, S:150E and S:460K, issue #1187 CL.1 B.1.1.529.2.3.20.10 Alias of B.1.1.529.2.3.20.10, USA/South Korea/Singapore, S:K478T reversion, S:V445A CM.10 B.1.1.529.2.3.20.11 Alias of B.1.1.529.2.3.20.11, USA/South Korea, S:R346T, S:F486S, from #1509 CM.11 B.1.1.529.2.3.20.12 Alias of B.1.1.529.2.3.20.12, Hong Kong, US, Australia, Japan, ORF8:T12I, from #1481 CM.12 B.1.1.529.2.3.20.1 Alias of B.1.1.529.2.3.20.1, S:N17S, from pango-designation issue #1129 CM.1 B.1.1.529.2.3.20.2.1 Alias of B.1.1.529.2.3.20.2.1, Indonesia/Australia, S:F486S, issue #1356 CM.2.1 B.1.1.529.2.3.20.2 Alias of B.1.1.529.2.3.20.2, international, ORF1a:S2103F CM.2 B.1.1.529.2.3.20.3 Alias of B.1.1.529.2.3.20.3, USA/South Korea/Australia, S:G485D CM.3 B.1.1.529.2.3.20.4.1 Alias of B.1.1.529.2.3.20.4.1, S:K478R, Philippines/Japan/USA CM.4.1 B.1.1.529.2.3.20.4 Alias of B.1.1.529.2.3.20.4, USA/Singapore/SouthKorea, ORF1b:D146G CM.4 B.1.1.529.2.3.20.5.1 Alias of B.1.1.529.2.3.20.5.1, S:Q675R CM.5.1 B.1.1.529.2.3.20.5.2 Alias of B.1.1.529.2.3.20.5.2, S:G485D, USA/Australia, from issue #1386 CM.5.2 B.1.1.529.2.3.20.5 Alias of B.1.1.529.2.3.20.5, global, 10802T CM.5 B.1.1.529.2.3.20.6.1 Alias of B.1.1.529.2.3.20.6.1, S:A348S CM.6.1 B.1.1.529.2.3.20.6 Alias of B.1.1.529.2.3.20.6, global, ORF1a:G30A CM.6 B.1.1.529.2.3.20.7 Alias of B.1.1.529.2.3.20.7, Japan/Singapore, S:F486S CM.7 B.1.1.529.2.3.20.8.1 Alias of B.1.1.529.2.3.20.8.1, Australia/England, S:F486S CM.8.1 B.1.1.529.2.3.20.8 Alias of B.1.1.529.2.3.20.8, S:G446S CM.8 B.1.1.529.2.3.20.9 Alias of B.1.1.529.2.3.20.9, USA/Canada/Israel, S:S256L CM.9 B.1.1.529.5.2.21.1 Alias of B.1.1.529.5.2.21.1, S:N450D, issue #1108 CN.1 B.1.1.529.5.2.21.2 Alias of B.1.1.529.5.2.21.2, S:R346T, S:Y28H, USA/Canada, from #1404 CN.2 B.1.1.529.5.2.6.1.1 Alias of B.1.1.529.5.2.6.1.1, Portugal, France, Denmark, UK lineage, S:V445A CP.1.1 B.1.1.529.5.2.6.1.2 Alias of B.1.1.529.5.2.6.1.2, England, S:K150N CP.1.2 B.1.1.529.5.2.6.1.3 Alias of B.1.1.529.5.2.6.1.3, England, S:G446S CP.1.3 B.1.1.529.5.2.6.1 Alias of B.1.1.529.5.2.6.1, global lineage, 27360C CP.1 B.1.1.529.5.2.6.2 Alias of B.1.1.529.5.2.6.2, Bangladesh, S:N334K CP.2 B.1.1.529.5.2.6.3 Alias of B.1.1.529.5.2.6.3, Turkey, S:N460Y CP.3 B.1.1.529.5.2.6.4 Alias of B.1.1.529.5.2.6.4, Turkey, S:I770V CP.4 B.1.1.529.5.2.6.5 Alias of B.1.1.529.5.2.6.5, South Africa, S:C1247F CP.5 B.1.1.529.5.2.6.6 Alias of B.1.1.529.5.2.6.6, S:V1264L CP.6 B.1.1.529.5.3.1.4.1.1.1.1 Alias of B.1.1.529.5.3.1.4.1.1.1.1, Canada/England, S:A262S CQ.1.1 B.1.1.529.5.3.1.4.1.1.1 Alias of B.1.1.529.5.3.1.4.1.1.1, Bangladesh, defined by S:Y144- and 11866T CQ.1 B.1.1.529.5.3.1.4.1.1.2 Alias of B.1.1.529.5.3.1.4.1.1.2, Japan/US, defined by S:V445A CQ.2 B.1.1.529.5.2.18.1.1 Alias of B.1.1.529.5.2.18.1.1, S:V62I CR.1.1 B.1.1.529.5.2.18.1.2 Alias of B.1.1.529.5.2.18.1.2, Canada/Israel, S:V445A CR.1.2 B.1.1.529.5.2.18.1.3 Alias of B.1.1.529.5.2.18.1.3, found mainly in Denmark and Japan, from pango-designation issue #1355 CR.1.3 B.1.1.529.5.2.18.1 Alias of B.1.1.529.5.2.18.1, global, S:R346T CR.1 B.1.1.529.5.2.18.2 Alias of B.1.1.529.5.2.18.2, England, S:Y145H CR.2 B.1.1.529.4.1.10.1 Alias of B.1.1.529.4.1.10.1, Denmark, Netherlands, England, defined by S:K444R CS.1 B.1.1.529.5.2.36.1 Alias of B.1.1.529.5.2.36.1, India/Pakistan lineage, defined by S:K356T CT.1 B.1.1.529.5.1.26.1 Alias of B.1.1.529.5.1.26.1, Central/Eastern Europe, S:T95I, S:T547K CU.1 B.1.1.529.2.75.3.1.1.3.1 Alias of B.1.1.529.2.75.3.1.1.3.1, Ireland, S:L452R CV.1 B.1.1.529.2.75.3.1.1.3.2 Alias of B.1.1.529.2.75.3.1.1.3.2, Chile, S:486P CV.2 B.1.1.529.5.3.1.1.1.1.1.1.14.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.14.1, England, S:G446S CW.1 B.1.1.529.5.2.7.1 Alias of B.1.1.529.5.2.7.1, found mainly in Belgium, Netherlands and Luxembourg, from pango-designation issue #1247 CY.1 B.1.1.529.5.3.1.1.1.1.1.1.1.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.1.1, England/SouthKorea/Romania, S:F490I CZ.1 B.1.1.25.2 Alias of B.1.1.25.2, Australia D.2 B.1.1.25.3 Alias of B.1.1.25.3, Australia D.3 B.1.1.25.4 Alias of B.1.1.25.4, Irish/ Northern Irish lineage D.4 B.1.1.25.5 Alias of B.1.1.25.5, Swedish/ Denmark lineage D.5 B.1.1.529.5.2.38.1 Alias of B.1.1.529.5.2.38.1, Indonesia, S:R346T DA.1 B.1.1.529.5.2.25.1 Alias of B.1.1.529.5.2.25.1, France/Netherlands/Spain, S:R346T, S:N460K DB.1 B.1.1.529.5.2.25.2 Alias of B.1.1.529.5.2.25.2, BeNeLux, S:A262S DB.2 B.1.1.529.4.6.5.1 Alias of B.1.1.529.4.6.5.1, global, defined by S:N460S DC.1 B.1.1.529.2.3.21.1 Alias of B.1.1.529.2.3.21.1, Philippines/Australia, Δ69-70, Δ144, V213E, G339N, R346T, Y449N, N460K, N481K, Q493L, K1205N, from #1287 DD.1 B.1.1.529.5.1.23.1 Alias of B.1.1.529.5.1.23.1, S:A694V DE.1 B.1.1.529.5.1.23.2 Alias of B.1.1.529.5.1.23.2, S:R346T, S:G181V DE.2 B.1.1.529.5.10.1.1.1 Alias of B.1.1.529.5.10.1.1.1 found mainly in USA, from pango-designation issue #1494 DF.1.1 B.1.1.529.5.10.1.1 Alias of B.1.1.529.5.10.1.1, found mainly in UK, from pango-designation issue #1270 DF.1 B.1.1.529.5.2.24.2.1.1.1 Alias of B.1.1.529.5.2.24.2.1.1.1, defined by S:G252S DG.1 B.1.1.529.5.1.22.1 Alias of B.1.1.529.5.1.22.1, found mainly in Denmark, from pango-designation issue #1242 DH.1 B.1.1.529.5.1.25.1.1 Alias of B.1.1.529.5.1.25.1.1, found in Peru, from pango-designation issue #1245 DJ.1.1 B.1.1.529.5.1.25.1.2 Alias of B.1.1.529.5.1.25.1.2, found mainly in Peru, from pango-designation issue #1379 DJ.1.2 B.1.1.529.5.1.25.1.3 Alias of B.1.1.529.5.1.25.1.3 found mainly in Peru, Colombia and USA, from pango-designation issue #1409 DJ.1.3 B.1.1.529.5.1.25.1 Alias of B.1.1.529.5.1.25.1, found mainly in Peru, from pango-designation issue #1245 DJ.1 B.1.1.529.5.3.1.1.1.1.1.1.7.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.7.1, S:339N, ORF1a:A1809T DK.1 B.1.1.529.5.1.15.1 Alias of B.1.1.529.5.1.15.1, found mainly in Brazil and USA, from pango-designation issue #1376 DL.1 B.1.1.529.5.3.1.1.1.1.1.1.15.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.15.1, Spain/Europe/US, S:A348S DM.1 B.1.1.529.5.3.1.1.1.1.1.1.5.1.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.5.1.1 found mainly in UK and Denmark, from pango-designation issue #1463 DN.1.1 B.1.1.529.5.3.1.1.1.1.1.1.5.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.5.1, S:K147N DN.1 B.1.1.529.5.3.1.1.1.1.1.1.8.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.8.1, S:A352S, England/Belgium DP.1 B.1.1.529.5.2.47.1 Alias of B.1.1.529.5.2.47.1 found mainly in Indonesia, Germany, and USA, from pango-designation issue #1496 DQ.1 B.1.1.529.5.3.1.1.1.1.1.1.3.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.3.1, found mainly in USA, from pango-designation issue #1420 DR.1 B.1.1.529.2.75.5.1.3.1.1 Alias of B.1.1.529.2.75.5.1.3.1.1, USA/Ireland/Austria, S:F486S, S:R403K DS.1 B.1.1.529.5.3.1.1.1.1.1.1.32.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.32.1 England, S:F494P, from issue #1484 DT.1 B.1.258.2.1 Alias of B.1.258.2.1, UK lineage G.1 B.1.1.277.1 Alias of B.1.1.277.1, South Korean lineage K.1 B.1.1.277.2 Alias of B.1.1.277.2, Russian lineage K.2 B.1.1.277.3 Alias of B.1.1.277.3, Norway lineage K.3 B.1.1.10.1 Alias of B.1.1.10.1, Canadian lineage L.1 B.1.1.10.2 Alias of B.1.1.10.2, Netherlands lineage L.2 B.1.1.10.3 Alias of B.1.1.10.3, Nigerian/ European lineage with long branch from B.1.1.10 L.3 B.1.1.10.4 USA lineage, alias of B.1.1.10.4 L.4 B.1.1.294.1 Alias of B.1.1.294.1, Israel M.1 B.1.1.294.2 Alias of B.1.1.294.2, Swiss Lineage M.2 B.1.1.294.3 Alias of B.1.1.294.3, English Lineage M.3 B.1.1.33.10 Alias of B.1.1.33.10, Brazilian lineage described in https://virological.org/t/identification-of-a-new-b-1-1-33-sars-cov-2-variant-of-interest-voi-circulating-in-brazil-with-mutation-e484k-and-multiple-deletions-in-the-amino-n-terminal-domain-of-the-spike-protein/675 N.10 B.1.1.33.1 Alias of B.1.1.33.1, US N.1 B.1.1.33.2 Alias of B.1.1.33.2, European lineage N.2 B.1.1.33.3 Alias of B.1.1.33.3, Argentinian N.3 B.1.1.33.4 Alias of B.1.1.33.4, Chilean N.4 B.1.1.33.5 Alias of B.1.1.33.5, Argentinian N.5 B.1.1.33.6 Alias of B.1.1.33.6, Chilean N.6 B.1.1.33.7 Alias of B.1.1.33.7, Uruguay N.7 B.1.1.33.8 Alias of B.1.1.33.8, Kenyan N.8 B.1.1.33.9 Alias of B.1.1.33.9, Brazilian lineage N.9 B.1.1.28.1.10.1 Alias of B.1.1.28.1.10.1, Aruba lineage, from pango-designation issue #179 P.1.10.1 B.1.1.28.1.10.2 Alias of B.1.1.28.1.10.2, Mexico lineage, from pango-designation issue #179 P.1.10.2 B.1.1.28.1.10 Alias of B.1.1.28.1.10, predominantly USA lineage, from pango-designation issue #179 P.1.10 B.1.1.28.1.11 Alias of B.1.1.28.1.11, Brazil lineage, from pango-designation issue #164 P.1.11 B.1.1.28.1.12.1 Sublineage of P.1.12 reported predominantly from Peru and US (from pango-designation issue #282) P.1.12.1 B.1.1.28.1.12 Alias of B.1.1.28.1.12, predominantly Peru lineage, from pango-designation issue #212 P.1.12 B.1.1.28.1.13 Alias of B.1.1.28.1.13, USA lineage, from pango-designation issue #231 P.1.13 B.1.1.28.1.14 Alias of B.1.1.28.1.14, predominantly Canada lineage, from pango-designation issue #231 P.1.14 B.1.1.28.1.15 Alias of B.1.1.28.1.15, predominantly Chile lineage, from pango-designation issue #231 P.1.15 B.1.1.28.1.16 Alias of B.1.1.28.1.16, predominantly Belgium lineage also in other countries in Europe, from pango-designation issue #231 P.1.16 B.1.1.28.1.17.1 Alias of B.1.1.28.1.17.1, predominantly in Luxembourg, from pango-designation issue #231 P.1.17.1 B.1.1.28.1.17 Alias of B.1.1.28.1.17, predominantly USA and Mexico lineage, from pango-designation issue #231 P.1.17 B.1.1.28.1.1 Alias of B.1.1.28.1.1, European lineage in Italy and Germany P.1.1 B.1.1.28.1.2 Alias of B.1.1.28.1.2, Netherlands/Brazil lineage. Imported into Netherlands, likely with local transmission here and continued circulation within and/or reintroduction into Brazil, pango-designation issue #56 P.1.2 B.1.1.28.1.3 Alias of B.1.1.28.1.3, Brazil lineage, from pango-designation issue #141 P.1.3 B.1.1.28.1.4 Alias of B.1.1.28.1.4, Brazil lineage, from pango-designation issue #141 P.1.4 B.1.1.28.1.5 Alias of B.1.1.28.1.5, Brazil lineage, from pango-designation issue #141 P.1.5 B.1.1.28.1.6 Alias of B.1.1.28.1.6, Brazil lineage, from pango-designation issue #141 P.1.6 B.1.1.28.1.7.1 Alias of B.1.1.28.1.7.1, Peru lineage, from pango-designation issue #326 P.1.7.1 B.1.1.28.1.7 Alias of B.1.1.28.1.7, Brazil lineage, from pango-designation issue #141 P.1.7 B.1.1.28.1.8 Alias of B.1.1.28.1.8, Brazil lineage, from pango-designation issue #164 P.1.8 B.1.1.28.1.9 Alias of B.1.1.28.1.9, Brazil lineage, from pango-designation issue #174 P.1.9 B.1.1.28.1 Alias of B.1.1.28.1, Brazilian lineage with a number of spike mutations with likely functional significance E484K, K417T, and N501Y. Described in https://virological.org/t/genomic-characterisation-of-an-emergent-sars-cov-2-lineage-in-manaus-preliminary-findings/586. P.1 B.1.1.28.2 Alias of B.1.1.28.2, Brazilian lineage P.2 B.1.1.28.3 Alias of B.1.1.28.3, Lineage predominantly in the Philippines with spike mutations E484K, N501Y, P681H, 141-143del. Described in Tablizo et al 2021: https://www.medrxiv.org/content/10.1101/2021.03.03.21252812v2 P.3 B.1.1.28.4 Alias of B.1.1.28.4, Brazil lineage, pango-designation issue #68 P.4 B.1.1.28.5 Alias of B.1.1.28.5, Brazil lineage, pango-designation issue #86 P.5 B.1.1.28.6 Alias of B.1.1.28.6, Uruguay lineage, from pango-designation issue #148 P.6 B.1.1.28.7 Alias of B.1.1.28.7, Brazil lineage, from pango-designation issue #29 P.7 B.1.1.7.1 Alias of B.1.1.7.1, predominantly Lithuania lineage, from pango-designation issue #39 Q.1 B.1.1.7.2 Alias of B.1.1.7.2, Italy lineage, from pango-designation issue #79 Q.2 B.1.1.7.3 Alias of B.1.1.7.3, USA lineage, from pango-designation issue #92 Q.3 B.1.1.7.4 Alias of B.1.1.7.4, lineage in multiple countries with spike H681R, from pango-designation issue #176 Q.4 B.1.1.7.5 Alias of B.1.1.7.5, Israel lineage, from pango-designation issue #165 Q.5 B.1.1.7.6 Alias of B.1.1.7.6, France lineage, from pango-designation issue #183 Q.6 B.1.1.7.7 Alias of B.1.1.7.7, predominantly France lineage, from pango-designation issue #183 Q.7 B.1.1.7.8 Alias of B.1.1.7.8, Sri Lanka lineage, from pango-designation issue #197 Q.8 B.1.1.316.1 Alias of B.1.1.316.1, Sublineage of B.1.1.316 with 3 additional spike mutations, circulating in a number of countries. pango-designation issue #17 R.1 B.1.1.316.2 Alias of B.1.1.316.2, Sublineage of B.1.1.316 with E484K. pango-designation issue #18 R.2 B.1.1.217.1 Alias of B.1.1.217.1, Latvian lineage, previously I.1 S.1 B.1.177.60.1 Alias of B.1.177.60.1, England U.1 B.1.177.60.2 Alias of B.1.177.60.2, Denmark U.2 B.1.177.60.3 Alias of B.1.177.60.3, Norway and Latvia U.3 B.1.177.54.1 Alias of B.1.177.54.1, Northern Irish and Irish lineage V.1 B.1.177.54.2 Alias of B.1.177.54.2, Northern Irish lineage V.2 B.1.177.53.1 Alias of B.1.177.53.1, French and US lineage W.1 B.1.177.53.2 Alias of B.1.177.53.2, Dutch lineage W.2 B.1.177.53.3 Alias of B.1.177.53.3, UK lineage W.3 B.1.177.53.4 Alias of B.1.177.53.4, UK lineage W.4 Recombinant lineage of BA.1 and BA.2, USA lineage, from pango-designation issue #664 XAA Recombinant lineage of BA.1 and BA.2, Germany lineage, from pango-designation issue #665 XAB Recombinant lineage of BA.1 and BA.2, Canada and USA lineage, from pango-designation issue #590 XAC Recombinant lineage of BA.2 and BA.1, Germany lineage, from pango-designation issue #607 XAD Recombinant lineage of BA.2 and BA.1, USA and Chile lineage, from pango-designation issue #637 XAE Recombinant lineage of BA.1 and BA.2, Costa Rica lineage, from pango-designation issue #676 XAF Recombinant lineage of BA.1 and BA.2, lineage in Brazil and other countries, from pango-designation issue #709 XAG Recombinant lineage of BA.2 and BA.1, lineage in Slovenia and other countries, from pango-designation issue #755 XAH Recombinant lineage of BA.2.12.1 and BA.4, predominantly in England, from pango-designation issue #826 XAJ Recombinant lineage of BA.1 and BA.2, Germany lineage, from pango-designation issue #823 XAK Recombinant lineage of BA.1 and BA.2, Germany lineage, from pango-designation issue #757 XAL Recombinant lineage of BA.1.1 and BA.2.9, lineage mainly found in Panama and USA, from pango-designation issue #759 XAM Recombinant lineage of BA.2 and BA.5.1, lineage found most often in Spain and Denmark, from pango-designation issue #771 XAN Recombinant lineage of BA.2* and BA.1*, USA lineage, from pango-designation issue #789 XAP Recombinant lineage of BA.1* and BA.2*, lineage mainly found in Canada, from pango-designation issue #798 XAQ Recombinant lineage of BA.1* and BA.2*, Reunion lineage, from pango-designation issue #860 XAR Recombinant lineage of BA.5* and BA.2*, USA lineage, from pango-designation issue #882 XAS Recombinant lineage of BA.2.3.13 and BA.1*, Japan lineage, from pango-designation issue #885 XAT Recombinant lineage of BA.1.1* and BA.2.9*, predominantly in Spain, England and France, from pango-designation issue #894 XAU Recombinant lineage of BA.2* and BA.5*, mainly France, USA, and Scotland lineage, from pango-designation issue #911 XAV Recombinant lineage of BA.2* and AY.122, Russia lineage, from pango-designation issue #895 XAW South Africa with S:R346T and ORF1a:K2108N, from issue #1255 XAY.1.1 Europe, ORF1a:T3646I XAY.1.2 South Africa/US lineage with 4 AA substitutions including S:D253G XAY.1 South Africa/Denmark/Israel lineage with ORF1a:Y3765C XAY.2 South Africa/Mauritius/Switzerland/France, ORF1b:D1869Y XAY.3 Recombinant lineage of BA.2 and AY.45, South Africa lineage, from pango-designation issue #844 XAY Recombinant lineage of BA.2.5, BA.5. and BA.2.5, predominantly found in France, Germany, Croatia, Denmark and USA, from pango-designation issue #797 XAZ Recombinant lineage with parental lineages B.1.1.7 and B.1.177, UK lineage XA Recombinant lineage of perhaps AY.45 and perhaps BA.2 (with perhaps 5 breakpoints), South_Africa lineage, constellation 2 from pango-designation issue #844 XBA Singapore/Denmark, defined by ORF1a:P309L XBB.1.1 Singapore, defined by S:S640F XBB.1.2 Singapore, India/Italy, defined by S:A484T XBB.1.3 Mainly Denmark, Norway and Sweden, defined by S:S673G, from pango-designation issue #1352 XBB.1.4.1 Europe, S:T883I XBB.1.4 USA, S:F486P XBB.1.5 USA, S:L216F, S:H146K, from issue #1428 XBB.1.6 USA-NY, S:V608I XBB.1.7 Denmark, S:186insSGG, C3241T XBB.1.8 S:F486P, England/South Korea/Singapore/Denmark XBB.1.9.1 ORF1a:G1819S, ORF1a:T4175I XBB.1.9 Mostly Bangladesh and Singapore, defined by S:G252V, from issue #1088 XBB.1 Defined by S:N764S XBB.2.1 Defined by S:Q613H XBB.2.2 Defined by S:D253G, from issue #1173 XBB.2 Defined by S:Q677R, India-TN/Singapore, from issue #1241 XBB.3.1 Defined by S:M177T XBB.3.2 Defined by S:V1122L, USA XBB.3.3 Defined by ORF1b:I1988V on ORF1a:D82G branch XBB.3 England/Austria, S:L5F, S:T470N XBB.4.1 Defined by S:K444R on ORF1a:D82G branch, from issue #1239 XBB.4 Defined by S:A653V on ORF1a:D82G branch, India-TN, Singapore, Australia XBB.5 Defined by S:F486P, USA, from #1459 XBB.6.1 Defined by C14178T, USA/India/England XBB.6 Recombinant lineage of BJ.1 and BA.2.75 with breakpoint in S1, found in USA and Singapore, from issue #1058 XBB Australia, S:G476S XBC.1.1.1 Mostly Australia, ORF1a:I3619T, ORF8:V114L XBC.1.1 Denmark, ORF1b:T132I XBC.1.2.1 Philippines/Netherlands/Denmark, T11269C XBC.1.2 Mostly Philippines, South Korea, US, Singapore, defined by S:L452M, from issue #1130 XBC.1 Mostly Philippines, defined by S:K97R XBC.2 Recombinant lineage of BA.2 and B.1.617.2*, predominantly in Philippines, from pango-designation issue #1100 XBC Recombinant lineage of BA.2.75.2 and BF.5, India and world, from pango-designation issue #1137 XBD Recombinant lineage of BA.5.2 and BE.4.1, predominantly in USA and England, from pango-designation issue #1246 XBE Recombinant lineage of BA.5.2.3 and CJ.1, Australia, from pango-designation issue #1259 XBF Recombinant lineage of BA.2.76 and BA.5.2, predominantly in UK, from pango-designation issue #896 XBG Recombinant lineage of BA.2.3.17 and BA.2.75.2, predominantly in Brunei, from pango-designation issue #1229 XBH Recombinant lineage of BA.2.3.20 and BA.5.2, possibly Philippines, from pango-designation issue #1268 XBJ Recombinant lineage of BA.5.2 and CJ.1, Denmark/Europe, from pango-designation issue #1418 XBK Recombinant lineage of XBB.1 with S:F486P and BA.2.75, Malaysia, from issue #1532 XBL Recombinant lineage of BA.2.76 and BF.3, India/USA/Canada, from issue #1441 XBM Recombinant lineage of BA.2.75 and XBB.3, mainly found in USA, from pango-designation issue #1296 XBN Recombinant lineage with parental lineages B.1.634 and B.1.631, Central and North America lineage, discussed in pango-designation issue #189. Formally B.1.628 XB Recombinant lineage with parental lineages AY.29 and B.1.1.7, Japan lineage, from pango-designation issue #263 XC Recombinant lineage of Delta and BA.1, France and Denmark lineage, from pango-designation issue #444 XD Recombinant lineage of BA.1 and BA.2, UK lineage, from pango-designation issue #454 XE Recombinant lineage of Delta and BA.1, UK lineage, from pango-designation issue #445 XF Recombinant lineage of BA.1 and BA.2, Denmark lineage, from pango-designation issue #447 XG Recombinant lineage of BA.1 and BA.2, Denmark lineage, from pango-designation issue #448 XH Recombinant lineage of BA.1 and BA.2, Finland lineage, from pango-designation issue #449 XJ Recombinant lineage of BA.1 and BA.2, Belgium lineage, from pango-designation issue #460 XK Recombinant lineage of BA.1 and BA.2, UK lineage, from pango-designation issue #464 XL Recombinant lineage of BA.1.1 and BA.2, European lineage, from pango-designation issue #472 XM Recombinant lineage of BA.1 and BA.2, UK lineage, from pango-designation issue #480 XN Recombinant lineage of BA.1.1 and BA.2, UK lineage, from pango-designation issue #481 XP Recombinant lineage of BA.1.1 and BA.2, UK lineage, from pango-designation issue #468 XQ Recombinant lineage of BA.1.1 and BA.2, UK lineage, from pango-designation issue #469 XR Recombinant lineage of Delta and BA.1.1, USA lineage, from pango-designation issue #471 XS Recombinant lineage of BA.1 and BA.2, South Africa lineage, from pango-designation issue #478 XT Recombinant lineage of BA.1 and BA.2, lineage in India and other countries, from pango-designation issue #522 XU Recombinant lineage of BA.1 and BA.2, lineage in Denmark and Italy, from pango-designation issue #463 XV Recombinant lineage of BA.1 and BA.2, USA, Germany, England lineage, from pango-designation issue #591 XW Recombinant lineage of BA.1 and BA.2, predominantly in USA, from pango-designation issue #606 XY Recombinant lineage of BA.2 and BA.1, USA lineage, from pango-designation issue #636 XZ B.1.177.52.1 Alias of B.1.177.52.1, Portuguese lineage Y.1 B.1.177.50.1 Alias of B.1.177.50.1, UK lineage Z.1 a1020s a105s a1078s a119s a1291v a1306s a1312v a15s a1609s a1708d a1812v a1918v a208g a211v a2132v a2199v a220v a222v a2268v a2529v a2710t a2909v a3143v a3209s a3209v a3333t a3392v a3518v a3529t a35v a373v a3837v a41v a43s a486v a498v a516t a520v a540v a55t a570d a576d a63t a647s a653v a656v a67v a701v a706v a829t a831v a845s a846v a859v a872t a872v a892s a899s a8v a975v a99s c1235f c136f c3059f d1028y d1084y d1118h d1183y d138h d138y d1554g d155y d1639e d1639n d203y d215g d215h d2179y d22y d2499n d253g d27y d2980g d2980n d3222n d34n d3681e d3728n d377y d3g d3l d3n d3y d405n d48n d614g d614n d61l d63g d72g d75e d762g d796y d80a d80y d935g d950n e1013k e102k e1092k e1205k e1264d e136d e156g e194d e2164a e2268d e2274a e2284g e2619q e2946d e33a e378q e452g e484a e484k e484q e484r e754a e913d e92k e972k f109l f120v f1422l f157l f1757l f186l f20l f2387v f26l f28l f2l f3071y f3605l f3l f486i f486p f486s f486v f490s f565l g100c g1129v g1219v g1307s g1362r g142d g142v g172c g18v g196v g204l g204p g204r g212v g214c g215c g215v g2207c g2436d g252v g257d g257s g3072c g3278s g3334s g339d g339h g446d g446s g496s g662s g669s g728c g75v g769v g82d g993s h1101y h110y h112y h1160y h125y h146q h1500y h17y h2357y h245n h300y h3509y h3580q h388y h47y h49y h655y h66d h78y i118m i123t i1259v i1566v i157v i1714t i186v i1987v i1998v i210v i2230t i2626l i292t i300f i3052v i3126t i33t i3758v i4049v i4205v i71t i720v i82s i82t k1073n k1305n k1348q k136e k1383r k147e k1655n k1657e k1795q k1895n k2143r k23n k2511n k256r k2674r k2q k2t k3353r k356t k3573e k417n k417t k444n k444r k444t k47r k737r k856r k97r l1099f l1203f l1375f l140f l1681f l18f l204f l212s l21i l2213f l24s l293s l3027f l3201f l3201p l331f l3468v l3606f l3644f l3667f l368i l3691s l3694f l37f l3829f l3915f l3930f l446f l452m l452q l452r l46f l4f l53f l5f l730f l84i l981f m1156i m1237t m1378i m1499i m153t m1586i m1596i m1765v m210i m2169v m2322i m234i m260i m2667i m3627i m3655i m3752i m4071i m620t m657i m657t n1187d n1191s n1324s n164k n185d n1898s n211i n2147d n2361k n2370k n3651s n3985h n4060s n440k n450d n460k n501t n501y n641s n679k n703i n764k n856k n969k p1000l p104l p1213l p13l p1427l p1452l p1640l p1640s p168s p1727l p1786s p1862l p1936h p199s p2046l p209l p2162s p2221s p2256l p2256s p2260s p2287s p2313l p25s p2612l p26s p271l p2739l p286l p314l p3371s p3395h p3395l p3395s p365s p3767l p383l p4337l p479s p621s p681h p681r p71l p748l p80r p970l p971l p9l q1009r q116h q1198k q1208h q14k q173k q183e q185h q19e q213k q2425r q2555r q281k q3346k q3729k q3777h q384h q3922r q3966r q414r q418h q493r q498r q556k q57h q613h q675h q677h q70r q7k q813r q949r q954h q957h q990l q9h r126s r1315c r1464w r146h r190k r190s r203k r203m r2115i r21g r21i r2257s r246g r246m r246n r2613h r2613n r2652s r346k r346s r346t r408s r52i r52k r68l s1188l s1221l s1252p s12f s135r s13i s171l s187l s1881g s197l s202i s202n s2083i s2103f s2104i s216l s216p s2188f s2261y s235f s245f s253p s255f s2563a s256l s2625f s26l s279f s2947n s2f s318l s33f s33i s3687l s371f s371l s373p s375f s37p s391f s413r s442c s443f s477n s494p s610l s640f s67f s704l s74f s84l s944l s982a s98f t1001i t1027i t1050i t1050n t1055i t1117i t11a t11k t120i t1246i t1250i t135i t1404m t14i t151i t1542i t1567a t1597i t1637i t1638i t1754i t175i t175m t1760i t1774i t1820i t19i t19r t205i t2084i t2099i t20n t2124i t2154i t2163i t2166i t216a t2174i t223i t223n t2283i t229i t2537i t2648i t265i t2777i t284i t28i t29i t3058i t307i t3090i t30i t310i t3255i t325i t3284i t3646a t3750i t376a t4087i t4090i t40i t4161i t4175i t4355i t470n t478i t478k t478r t547k t551i t61s t654a t716i t727i t730i t73i t747i t76i t842i t859n t945n t951i t95i t999i t9i v1025a v1104l v1116i v1176f v1228l v1279f v1706i v1811f v1814f v1887i v2089f v213e v213g v213l v2178f v2223l v2276i v2536f v2588f v2715i v2865i v2930l v30l v3449f v367f v36f v3718a v3718f v445a v445p v483a v50a v50i v58f v62f v62l v70i v70l v71l v72i v757f v82a v83a v86f v90f v972i w131c w152c w152l w152r w258l w31c w64r y113h y1155f y144f y145c y145h y1464c y156c y189c y264h y3063s y3160h y3723c y3765c y4080h y449h y496c y505h y73c y822c *122r del119/120 del13/13 del138/144 del14/14 del141/141 del141/143 del141/144 del143/143 del143/145 del144/144 del157/158 del2055/2075 del2084/2084 del210/210 del212/212 del23/32 del24/30 del241/243 del243/244 del247/249 del247/253 del25/27 del255/256 del256/258 del257/257 del257/259 del30/32 del31/33 del3674/3676 del3675/3677 del447/448 del55/71 del63/62 del69/70 del82/86 e106* e64* g8* k68* q18* q27* q29* SARSMutOnto is an ontology that describes the SARS-CoV2 genome structure by detailing its component genes. It also describes all the variants listed by the researchers while keeping the hierarchical relationship (variant / sub-variant) between the variants